RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HECA (Homo sapiens)

Ensembl gene IDs: ENSG00000112406

Ensembl transcript IDs: ENST00000367658.3

Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTaGTCAAAACCACAGATTAACACTCGGGAATCAAGACAGGGCAAG +
Preference number: 1 (lower is better)
Translates to: RVNPNPNAQDYPSGL*SKPQINTRESRQGK
Trigger: CTTGCCCTGTCTTGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR TCA 90 bp ACCCATTATATCAACTGCTTCAAATGTAACAAGAGAATGAAGAGGTaGGATGGCCTGAAGAGAAAACAATCAATCAGAAATTGTCCTCTC +
Preference number: 1 (lower is better)
Translates to: THYINCFKCNKRMKR*DGLKRKQSIRNCPL
Trigger: GAGAGGACAATTTCTGATTGATTGTTTTCTCTTCAGGCCATCTCACCTCTTCATTCTCTTGTTACATTTGAAGCAGTTGATATAATGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR CCA 90 bp CAAATGGTATTACGAGGACAAGAGAAACTTAGCACTTTTTGCATCTaGGTACAGGAGAGAATCAATAAGGAGATAGTTAATTCACCACTA +
Preference number: 1 (lower is better)
Translates to: QMVLRGQEKLSTFCI*VQERINKEIVNSPL
Trigger: TAGTGGTGAATTAACTATCTCCTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCCTCGTAATACCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR GCA 90 bp ACACCAAATGACACTTCAACAGTGCAACCTGTAATAAATCATCACTaGCCAAATCAGGTTATTCATGGGTTCTCCTTAAAAGCTATATTA +
Preference number: 1 (lower is better)
Translates to: TPNDTSTVQPVINHH*PNQVIHGFSLKAIL
Trigger: TAATATAGCTTTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGTTGCACTGTTGAAGTGTCATTTGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR CCA 90 bp TTTCAATTACCCGGAATATTCAGTGAACAGGACATAGAGATGAACTaGGTTAGGCAGCATCCTATTATAGGAAATAAAACACTAAACAAG +
Preference number: 1 (lower is better)
Translates to: FQLPGIFSEQDIEMN*VRQHPIIGNKTLNK
Trigger: CTTGTTTAGTGTTTTATTTCCTATAATAGGATGCTGCCTAACCCAGTTCATCTCTATGTCCTGTTCACTGAATATTCCGGGTAATTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR GCA 90 bp AAAATCCAAATGGTATTACGAGGACAAGAGAAACTTAGCACTTTTTaGATCTGGGTACAGGAGAGAATCAATAAGGAGATAGTTAATTCA +
Preference number: 1 (lower is better)
Translates to: KIQMVLRGQEKLSTF*IWVQERINKEIVNS
Trigger: TGAATTAACTATCTCCTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCCTCGTAATACCATTTGGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR CCA 90 bp AGTGCAACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATaGGTTCTCCTTAAAAGCTATATTACCAACTTCAAAGACACAATT +
Preference number: 1 (lower is better)
Translates to: SATCNKSSLPKSGYS*VLLKSYITNFKDTI
Trigger: AATTGTGTCTTTGAAGTTGGTAATATAGCTTTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGTTGCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR CAA 90 bp GAACACAGCATACACTACACTGACGGCAGTTCTAAATTCAGGAGCTaGCTGAATGCAATGTATAGGTCAATTGTAAGCTTCAGAACAACA +
Preference number: 2 (lower is better)
Translates to: EHSIHYTDGSSKFRS*LNAMYRSIVSFRTT
Trigger: TGTTGTTCTGAAGCTTACAATTGACCTATACATTGCATTCAGCAAGCTCCTGAATTTAGAACTGCCGTCAGTGTAGTGTATGCTGTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR-3UTR GCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTGAACCCCAACCCAAATaGACAGGATTACCCATCTGG +
Preference number: 2 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFEPQPK*TGLPIW
Trigger: CCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTC...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR-3UTR CCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCAACAGGATTACCCATCTaGGCTCTGGTCAAAACCACA +
Preference number: 2 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKATGLPI*ALVKTT
Trigger: TGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTGT...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR-3UTR TCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCACCTGTGAGAAGAACCTaGCACCAAATGACACTTCAA +
Preference number: 2 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAPVRRT*HQMTLQ
Trigger: TTGAAGTGTCATTTGGTGTCAGGTTCTTCTCACAGG...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR-3UTR TCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCAGAATGCCCAATGCTCTaGCTAATCAAGTTCTATATA +
Preference number: 2 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAECPML*LIKFYI
Trigger: TATATAGAACTTGATTAGTCAGAGCATTGGGCATTC...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR-3UTR CCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTTCTAAAAAGGCAACATaGAACACAGCATACACTACA +
Preference number: 2 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFSKKAT*NTAYTT
Trigger: TGTAGTGTATGCTGTGTTCCATGTTGCCTTTTTAGA...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR TCA 72 bp ACAGCACTTGTGCCACTTTCAGGTCACCTGTCAGTGTaGGTAAACTGCCTGCCCATGTGTGCTGCAGAACAC +
Preference number: 3 (lower is better)
Translates to: TALVPLSGHLSV*VNCLPMCAAEH
Trigger: GTGTTCTGCAGCACACATGGGCAGGCAGTTTACTCACACTGACAGGTGACCTGAAAGTGGCACAAGTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR CCA 72 bp CCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTaGTCAAAACCACAGATTAACACTCGGGAATCAAGA +
Preference number: 3 (lower is better)
Translates to: PNPNAQDYPSGL*SKPQINTRESR
Trigger: TCTTGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR GCA 72 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATaGACAGGATTACCCATCTGGGCTCTGGTCAAAACC +
Preference number: 3 (lower is better)
Translates to: SKILGKSEPQPK*TGLPIWALVKT
Trigger: GGTTTTGACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR-3UTR CAA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTGGACAGGAGAATCGCTaGAATCCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFGQENR*NPGGRG
Trigger: ACCTCTGCCTCCTGGATTCAAGCGATTCTCCTGTCC...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR CCA 72 bp CCCGGAATATTCAGTGAACAGGACATAGAGATGAACTaGGTTAGGCAGCATCCTATTATAGGAAATAAAACA +
Preference number: 3 (lower is better)
Translates to: PGIFSEQDIEMN*VRQHPIIGNKT
Trigger: TGTTTTATTTCCTATAATAGGATGCTGCCTAACCCAGTTCATCTCTATGTCCTGTTCACTGAATATTCCGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR-3UTR CAA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGGCATTAAAGACAAGTTaGCAGAAAGCTATGTCTTAC +
Preference number: 3 (lower is better)
Translates to: GQEKLSTFCIWVQERINKALKTS*QKAMSY
Trigger: GTAAGACATAGCTTTCTGCAAACTTGTCTTTAATGC...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR GCA 72 bp GACACTTCAACAGTGCAACCTGTAATAAATCATCACTaGCCAAATCAGGTTATTCATGGGTTCTCCTTAAAA +
Preference number: 3 (lower is better)
Translates to: DTSTVQPVINHH*PNQVIHGFSLK
Trigger: TTTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGTTGCACTGTTGAAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR GCA 72 bp ATGGTATTACGAGGACAAGAGAAACTTAGCACTTTTTaGATCTGGGTACAGGAGAGAATCAATAAGGAGATA +
Preference number: 3 (lower is better)
Translates to: MVLRGQEKLSTF*IWVQERINKEI
Trigger: TATCTCCTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCCTCGTAATACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR TCA 72 bp TTCCCAAATCAGCCAGATTTTCCCTCTAGACAAGAATaGATCGTCTTAAAGGCAAAAGATATTCCCAGATAT +
Preference number: 3 (lower is better)
Translates to: FPNQPDFPSRQE*IVLKAKDIPRY
Trigger: ATATCTGGGAATATCTTTTGCCTTTAAGACGATTCATTCTTGTCTAGAGGGAAAATCTGGCTGATTTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCGGATGGAGTAGCCCGTaGGTGGGGACTGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVGWSSP*VGTGPG
Trigger: CCCCGGGCCAGTCCCCACCCACGGGCTACTCCATCC...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCGCTTCTCGTTCCAGCTaGGCGCGCGGCCGATGCAGT +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVASRSS*ARGRCS
Trigger: ACTGCATCGGCCGCGCGCGCAGCTGGAACGAGAAGC...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCACCGGGAGCGCCCGGTaGCACAGGGCACAGTTTACC +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVTGSAR*HRAQFT
Trigger: GGTAAACTGTGCCCTGTGCCACCGGGCGCTCCCGGT...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCGGCTGCGGCACCCACTaGCTTCTCCTGGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVGCGTH*LLLGVL
Trigger: CAGAACTCCCAGGAGAAGGCAGTGGGTGCCGCAGCC...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCAGTTCTGCCGGTCCATaGAATGCCGGCGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVSSAGP*NAGGGG
Trigger: ACCTCCCCCGCCGGCATTCCATGGACCGGCAGAACT...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAGTTCCCGGCCCTGCGTaGAGCCGGCTCCGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESVPGPA*SRLRER
Trigger: TCTTTCCCGGAGCCGGCTTCACGCAGGGCCGGGAAC...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAAGGAGCGGGGGCCGCTaGAGTGGGCAGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESRSGGR*SGQERG
Trigger: TCCTCTCTCCTGCCCACTTCAGCGGCCCCCGCTCCT...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCGGCCGTTCCCGGCCCTaGGTGAAGCCGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIGRSRP*VKPAPG
Trigger: TCCCGGAGCCGGCTTCACGCAGGGCCGGGAACGGCC...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCCCTGCTCGTCGCCGCTaGTGTTGGCGCGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVPARRR*CWRACF
Trigger: AAAACAAGCGCGCCAACAGCAGCGGCGACGAGCAGG...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCCCGGCTCCATTTTCCTaGTCGTCGCCGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVPAPFS*SSPLLL
Trigger: CAACAGCAGCGGCGACGAGCAGGAAAATGGAGCCGG...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCCCAGCTGGTGCCAGCTaGCATCCCACCGTGACTTAC +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVPAGAS*HPTVTY
Trigger: GTAAGTCACGGTGGGATGGCAGCTGGCACCAGCTGG...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCCGGCGGGGGAGGTCGTaGCTTGGGCCTTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIRRGRS*LGPFWG
Trigger: GCCCCAGAAAGGCCCAAGCCACGACCTCCCCCGCCG...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCACAGTTCAGGCGGGCCTaGCAACATGGAGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESQFRRA*QHGEAA
Trigger: GGCTGCCTCTCCATGTTGTCAGGCCCGCCTGAACTG...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGCCCTCTCCGGCTTCCTaGAGCCGGCACGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKPSPAS*SRHAAT
Trigger: GGTGGCCGCGTGCCGGCTCCAGGAAGCCGGAGAGGG...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAGCCTGGGGATGTGAGTaGGGAGTTCGGAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESAWGCE*GVRRGP
Trigger: TGGACCTCTCCGAACTCCTCACTCACATCCCCAGGC...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCATGCAGATGATCTTGTaGACCCCTTCCAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVMQMIL*TPSRQS
Trigger: GGACTGCCTGGAAGGGGTTCACAAGATCATCTGCAT...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAGTGCTGCAGGGGCAGTaGTCGTTGTTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESVLQGQ*SLLHTT
Trigger: GGTGGTGTGCAACAACGAGCACTGCCCCTGCAGCAC...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAAGCCGCCGAAGGAACTaGACGGGGGTGTCGAAGTGT +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESSRRRN*TGVSKC
Trigger: ACACTTCGACACCCCCGTGCAGTTCCTTCGGCGGCT...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCACCCACTGCCTTCTCCTaGGAGTTCTGCCGGTCCATG +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESPTAFS*EFCRSM
Trigger: CATGGACCGGCAGAACTCCCAGGAGAAGGCAGTGGG...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCATTCTCCTGGGAGTTCTaGCGGTCCATGGAATGCCGG +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESFSWEF*RSMECR
Trigger: CCGGCATTCCATGGACCGGCAGAACTCCCAGGAGAA...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCACAAAGTGGGCATTTCTaGACACATGGCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESQSGHF*THGPQP
Trigger: TGGCTGGGGGCCATGTGTTCAGAAATGCCCACTTTG...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCATTATGCCTGGGGATGTaGGTGAGGAGTTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESLCLGM*VRSSER
Trigger: CCTCTCCGAACTCCTCACTCACATCCCCAGGCATAA...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAGGTCACCTGTCAGTGTaGGTAAACTGCCTGCCCATG +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESGHLSV*VNCLPM
Trigger: CATGGGCAGGCAGTTTACTCACACTGACAGGTGACC...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCACCGGCTTCCCACAGTaGTTACAGTTCAGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPITGFPQ*LQFRRA
Trigger: GGCCCGCCTGAACTGTAAGCACTGTGGGAAGCCGGT...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTGGAGTAGCCCGTGGGTaGGGACTGGCCCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFGVARG*GLARGA
Trigger: GGCTCCCCGGGCCAGTCCCCACCCACGGGCTACTCC...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCCATGGCCCCCAGCCATaGCCTTCTTGTGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIHGPQP*PSCEAP
Trigger: TGGAGCCTCACAAGAAGGCCATGGCTGGGGGCCATG...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCGCGGGCCTGACAACATaGAGAGGCAGCCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIAGLTT*RGSQDV
Trigger: GACATCCTGGCTGCCTCTCCATGTTGTCAGGCCCGC...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATCGCGTCCAGGTAGGTaGCCGGCGTCAGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKSRPGR*PASAKA
Trigger: CGCCTTCGCTGACGCCGGGCACCTACCTGGACGCGA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATGCCGGTCCATGGAATaGCGGCGGGGGAGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKCRSME*RRGRSW
Trigger: CCACGACCTCCCCCGCCGGCATTCCATGGACCGGCA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGCTGTTTTTGGGGTTaGGCATCTCGCTCGCTCGCG +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPICCFWG*ASRSLA
Trigger: CGCGAGCGAGCGAGATGCCCAACCCCAAAAACAGCA...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGCGTCGCCGCTGCTGTTaGCGCGCTTGTTTTTGCGGC +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKRRRCC*RACFCG
Trigger: GCCGCAAAAACAAGCGCGCCAACAGCAGCGGCGACG...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCTACCCATCTGGGCTCTaGTCAAAACCACAGATTAAC +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVYPSGL*SKPQIN
Trigger: GTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTA...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGGCCATGGCCTTCTTGTaGGGCTCCAGATGGATGGCG +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKAMAFL*GSRWMA
Trigger: CGCCATCCATCTGGAGCCTCACAAGAAGGCCATGGC...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGGGTGCATCCAGGTGCTaGAGGGGCAGTGCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKGASRC*RGSARC
Trigger: ACAACGAGCACTGCCCCTGCAGCACCTGGATGCACC...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCACTGGACGAGGATGCTaGTCTCCCACTCGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPITGRGC*SPTRRS
Trigger: GCTTCTACGAGTGGGAGAGCAGCATCCTCGTCCAGT...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCATGTTCTGGCGGCATTaGTTCTCGTTCCAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIMFWRH*FSFQLR
Trigger: GCGCAGCTGGAACGAGAAGCAATGCCGCCAGAACAT...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAAACGGGCACCGTAGGCTaGGGCACCCACTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKTGTVG*GTHCLL
Trigger: GAGAAGGCAGTGGGTGCCGCAGCCTACGGTGCCCGT...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGATAGTGCCCAGCTGGTaGCAGCTGCCATCCCACCGT +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKIVPSW*QLPSHR
Trigger: ACGGTGGGATGGCAGCTGGCACCAGCTGGGCACTAT...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAGAACCCCAACCCAAATaGACAGGATTACCCATCTGG +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESEPQPK*TGLPIW
Trigger: CCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTC...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCCAGGTTCCCACAGTGTaGACACTGCTGGACGTTGCT +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIQVPTV*TLLDVA
Trigger: AGCAACGTCCAGCAGTGTCCACACTGTGGGAACCTG...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAAATGGGGCTTCGTTTTTaGCATCGCCCGCGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKMGLRF*HRPRPQ
Trigger: CTGCGGCCGCGGGCGATGCCAAAAACGAAGCCCCAT...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGGTGTCCTTCTTCAAGTaGCCCTGGCCACAGCGGCAA +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKVSFFK*PWPQRQ
Trigger: TTGCCGCTGTGGCCAGGGCCACTTGAAGAAGGACAC...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGGGGGAGGTCGTGGCTTaGGCCTTTCTGGGGCTTATT +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKGEVVA*AFLGLI
Trigger: AATAAGCCCCAGAAAGGCCCAAGCCACGACCTCCCC...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCAGTTCCATCCACCAGTaGGAACTGTTCGAACACCGG +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPISSIHQ*ELFEHR
Trigger: CCGGTGTTCGAACAGTTCCCACTGGTGGATGGAACT...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAACAGGATTACCCATCTaGGCTCTGGTCAAAACCACA +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESTGLPI*ALVKTT
Trigger: TGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTGT...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTCGCGGCCGATGCAGTTaGACTGGACGAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFRGRCS*TGRGCC
Trigger: GCAGCATCCTCGTCCAGTTCAACTGCATCGGCCGCG...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTCCGGCCTACCGAAGCTaGAGATCAGGGGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFPAYRS*RSGEWH
Trigger: GTGCCACTCCCCTGATCTGCAGCTTCGGTAGGCCGG...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCAGCAGGTGCATCCAGGTaGTGCAGGGGCAGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAAGASR*CRGSAR
Trigger: ACGAGCACTGCCCCTGCAGCACCTGGATGCACCTGC...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGCGCCTTTGCTGTTTTTaGGGTTGGGCATCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKRLCCF*GWASRS
Trigger: CGAGCGAGATGCCCAACCCCAAAAACAGCAAAGGCG...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTTCCCCCTGGCCCACTTaGGCATCGTCTTCCATGCGC +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFSPWPT*ASSSMR
Trigger: GCGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGA...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGCGGCATACAGATGCATaGGTCTCCCTTGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKRHTDA*VSLEGD
Trigger: GTCACCTTCAAGGGAGACTCATGCATCTGTATGCCG...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAAAGAGAATGAAGAGGTaGGATGGCCTGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESKRMKR*DGLKRK
Trigger: TTTTCTCTTCAGGCCATCTCACCTCTTCATTCTCTT...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGTGGCGCGCTTGTTTTTaGGGCCGCCTTTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKWRACF*GRLCCF
Trigger: AAAACAGCAAAGGCGGCCGCAAAAACAAGCGCGCCA...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCACTCACGTGCAATATTaGCTAAATACTTCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVTHVQY*LNTSEK
Trigger: CTTTTCAGAAGTATTTAGGCAATATTGCACGTGAGT...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAAAGTTACTCAACAGCTaGTACCAGGACACAAAACAG +
Preference number: 4 (lower is better)
Translates to: QDYPSGLWSKPQINTRESKLLNS*YQDTKQ
Trigger: CTGTTTTGTGTCCTGGTAGCAGCTGTTGAGTAACTT...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATTCTTCAAGTGGCCCTaGCCACAGCGGCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKFFKWP*PQRQEQ
Trigger: CTGCTCTTGCCGCTGTGGCCAGGGCCACTTGAAGAA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTCGCAAGTCTTCCCCCTaGCCCACTTGGGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFRKSSP*PTWASS
Trigger: AGACGATGCCCAAGTGGGCCAGGGGGAAGACTTGCG...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
3UTR CAA 72 bp ATCCTCCCCACCATCTTAAAGCTGCATCAAAGATTCTaGGTAAGAGTGAACCCCAACCCAAATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: ILPTILKLHQRF*VRVNPNPNAQD
Trigger: ATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGATGCAGCTTTAAGATGGTGGGGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAAAGGCAGAGGTTGCAGTaGGCTGAGATCGCACTACTG +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKRQRLQ*AEIALL
Trigger: CAGTAGTGCGATCTCAGCTCACTGCAACCTCTGCCT...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCATGGCTTGGGCCTTTCTaGGGCTTATTTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAWLGPF*GLFGGL
Trigger: CAGGCCCCCAAATAAGCCCCAGAAAGGCCCAAGCCA...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCATTTACCACGTTTCTGTaGCTGGCACTGAGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAFTTFL*LALSAA
Trigger: GGCCGCGCTCAGTGCCAGCCACAGAAACGTGGTAAA...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTTACATAGTGCCCAGCTaGTGCCAGCTGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFYIVPS*CQLPSH
Trigger: GTGGGATGGCAGCTGGCACCAGCTGGGCACTATGTA...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGCAGTGTGGACACTGCTaGACGTTGCTATATTCGGAG +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKQCGHC*TLLYSE
Trigger: CTCCGAATATAGCAACGTCCAGCAGTGTCCACACTG...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATGCATCCGCTTCACCTaGTACCAGTCTGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKCIRFT*YQSVSF
Trigger: GAAGGACACAGACTGGTATCAGGTGAAGCGGATGCA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTCAGGGGAGTGGCACATaGGGCTTCGTTTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFQGSGT*GFVFGI
Trigger: GATGCCAAAAACGAAGCCCCATGTGCCACTCCCCTG...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATGCAGATCAGGGGAGTaGCACATGGGGCTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKCRSGE*HMGLRF
Trigger: AAAACGAAGCCCCATGTGCCACTCCCCTGATCTGCA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTCCGATGCAGTTGAACTaGACGAGGATGCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFPMQLN*TRMLLS
Trigger: GGAGAGCAGCATCCTCGTCCAGTTCAACTGCATCGG...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCGACATAGAGATGAACTaGGTTAGGCAGCATCCTATT +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIDIEMN*VRQHPI
Trigger: AATAGGATGCTGCCTAACCCAGTTCATCTCTATGTC...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCAGCTGCCATCCCACCGTaGCTTACACTTGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAAAIPP*LTLDAD
Trigger: ATCTGCATCAAGTGTAAGTCACGGTGGGATGGCAGC...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCAATTCAGGAGCTTGCTaGATGCAATGTATAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SKILGKSEPQPKCTGLPINSGAC*MQCIGQ
Trigger: TTGACCTATACATTGCATTCAGCAAGCTCCTGAATT...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTGGCAGTGCTCGTTGTTaGACACCACCTTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFGSARC*TPPSGS
Trigger: ACTACCAGAAGGTGGTGTGCAACAACGAGCACTGCC...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCAGGGCATCGTCTTCCATaGGCACGTGGAAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAGHRLP*ARGKCS
Trigger: TGAACACTTTCCACGTGCGCATGGAAGACGATGCCC...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGGACACTGCTGGACGTTaGTATATTCGGAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKDTAGR*YIRRST
Trigger: AGTACTTCTCCGAATATAGCAACGTCCAGCAGTGTC...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAAGAGGCTCCAGATGGATaGCGTTCTTTAAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKEAPDG*RSLRTP
Trigger: GGGAGTTCTTAAAGAACGCCATCCATCTGGAGCCTC...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGAGAGGTGAGATGGCCTaGAGAGAAAACAATCAATCA +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKRGEMA*RENNQS
Trigger: TGATTGATTGTTTTCTCTTCAGGCCATCTCACCTCT...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAACTTCCCAACCTCCAATaGAAGTTACTCAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKLPNLQ*KLLNSC
Trigger: GCAGCTGTTGAGTAACTTTCATTGGAGGTTGGGAAG...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCATATTCGGAGAAGTACTaGATCCCGATCCTCACGTCG +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAYSEKY*IPILTS
Trigger: CGACGTGAGGATCGGGATGCAGTACTTCTCCGAATA...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCACCACAGTGTGGACACTaGTGGACGTTGCTATATTCG +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAPQCGH*WTLLYS
Trigger: CGAATATAGCAACGTCCAGCAGTGTCCACACTGTGG...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATTTGTCCACATGTTCTaGCGGCATTGCTTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKFVHMF*RHCFSF
Trigger: GAACGAGAAGCAATGCCGCCAGAACATGTGGACAAA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATCTTCCATGCGCACGTaGAAAGTGTTCAGCTTATGC +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKSSMRT*KVFSLC
Trigger: GCATAAGCTGAACACTTTCCACGTGCGCATGGAAGA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGCCCTCTAGACAAGAATaGATCGTCTTAAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKPSRQE*IVLKAK
Trigger: TTTTGCCTTTAAGACGATTCATTCTTGTCTAGAGGG...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATGCAGAACACTAGGCTaGGATAGACTAATGCACTAT +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKCRTLG*DRLMHY
Trigger: ATAGTGCATTAGTCTATCTCAGCCTAGTGTTCTGCA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAAGGCAATTATTGGTTCTaGAGCTCACCAGTTAGATTC +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKGNYWF*SSPVRF
Trigger: GAATCTAACTGGTGAGCTTCAGAACCAATAATTGCC...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGACCACTACAGCTTTGTaGATTAAAGACAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GQEKLSTFCIWVQERINKTTTAL*IKDKFA
Trigger: TGCAAACTTGTCTTTAATGCACAAAGCTGTAGTGGT...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATATTCAGGGCAAGCTTaGGGTATTAAGGTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKYSGQA*GIKVSR
Trigger: TCTACTGACCTTAATACCCCAAGCTTGCCCTGAATA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTACCCGGAATATTCAGTaGACAGGACATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFTRNIQ*TGHRDE
Trigger: TTCATCTCTATGTCCTGTTCACTGAATATTCCGGGT...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR TCA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAAGAATGCCCAATGCTCTaGCTAATCAAGTTCTATATA +
Preference number: 4 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKECPML*LIKFYI
Trigger: TATATAGAACTTGATTAGTCAGAGCATTGGGCATTC...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCAAAACTTAGCACTTTTTaGATCTGGGTACAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAKLSTF*IWVQER
Trigger: TCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTT...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCACAATCCTCTTTTAGTTaGATCAAACACTGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAQSSFS*IKHCQF
Trigger: GAACTGACAGTGTTTGATGCAACTAAAAGAGGATTG...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCAAGATATTCCCAGATATaGTTCATGCTCTTATGCTTT +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKARYSQI*FMLLCF
Trigger: AAAGCATAAGAGCATGAAGCATATCTGGGAATATCT...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCAGCAGATCATTGTATCTaGTCAAGGTATAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKAADHCI*SRYKTL
Trigger: AAGAGTTTTATACCTTGAGCAGATACAATGATCTGC...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR GCA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTATTAAGCATCAGTCTTaGAGGACTAAACAAAAGACT +
Preference number: 4 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFIKHQS*RTKQKT
Trigger: AGTCTTTTGTTTAGTCCTGCAAGACTGATGCTTAAT...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 90 bp TTCCCTCGGCTCCCGTCTAGCCGCACGGCCCGTGCCGCGCCATCCTaGCCGCCGCGCCCTCTCCGGCTTCCTGGAGCCGGCACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: FPRLPSSRTARAAPS*PPRPLRLPGAGTRP
Trigger: TGGCCGCGTGCCGGCTCCAGGAAGCCGGAGAGGGCGCGGCGGCCAGGATGGCGCGGCACGGGCCGTGCGGCTAGACGGGAGCCGAGGGAA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 90 bp TCAGCGAAGGCGGATCCCAGAGGCACGGCCGTTCCCGGCCCTGCGTaGAGCCGGCTCCGGGAAAGAACGGAGGGCGCGAGCCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SAKADPRGTAVPGPA*SRLRERTEGASRRF
Trigger: GAACCGCCGGCTCGCGCCCTCCGTTCTTTCCCGGAGCCGGCTTCACGCAGGGCCGGGAACGGCCGTGCCTCTGGGATCCGCCTTCGCTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 90 bp CGGGGAGCCACCGGGGGAACGGGCACCGTAGGCTGCGGCACCCACTaGCTTCTCCTGGGAGTTCTGCCGGTCCATGGAATGCCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RGATGGTGTVGCGTH*LLLGVLPVHGMPAG
Trigger: CCCCGCCGGCATTCCATGGACCGGCAGAACTCCCAGGAGAAGGCAGTGGGTGCCGCAGCCTACGGTGCCCGTTCCCCCGGTGGCTCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 90 bp GCTGTTTTTGGGGTTGGGCATCTCGCTCGCTCGCGTCCAGGTAGGTaGCCGGCGTCAGCGAAGGCGGATCCCAGAGGCACGGCCGTTCCC +
Preference number: 5 (lower is better)
Translates to: AVFGVGHLARSRPGR*PASAKADPRGTAVP
Trigger: GGGAACGGCCGTGCCTCTGGGATCCGCCTTCGCTGACGCCGGGCACCTACCTGGACGCGAGCGAGCGAGATGCCCAACCCCAAAAACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 90 bp AGGCTGCGGCACCCACTGCCTTCTCCTGGGAGTTCTGCCGGTCCATaGAATGCCGGCGGGGGAGGTCGTGGCTTGGGCCTTTCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: RLRHPLPSPGSSAGP*NAGGGGRGLGLSGA
Trigger: AGCCCCAGAAAGGCCCAAGCCACGACCTCCCCCGCCGGCATTCCATGGACCGGCAGAACTCCCAGGAGAAGGCAGTGGGTGCCGCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 90 bp GCGGCACCCACTGCCTTCTCCTGGGAGTTCTGCCGGTCCATGGAATaGCGGCGGGGGAGGTCGTGGCTTGGGCCTTTCTGGGGCTTATTT +
Preference number: 5 (lower is better)
Translates to: AAPTAFSWEFCRSME*RRGRSWLGPFWGLF
Trigger: AAATAAGCCCCAGAAAGGCCCAAGCCACGACCTCCCCCGCCGGCATTCCATGGACCGGCAGAACTCCCAGGAGAAGGCAGTGGGTGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 90 bp GGCGGCATTGCTTCTCGTTCCAGCTGCGCGCGCGGCCGATGCAGTTaGACTGGACGAGGATGCTGCTCTCCCACTCGTAGAAGCACTGCA +
Preference number: 5 (lower is better)
Translates to: GGIASRSSCARGRCS*TGRGCCSPTRRSTA
Trigger: TGCAGTGCTTCTACGAGTGGGAGAGCAGCATCCTCGTCCAGTTCAACTGCATCGGCCGCGCGCGCAGCTGGAACGAGAAGCAATGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 90 bp AGCACTGCAGGTGCATCCAGGTGCTGCAGGGGCAGTGCTCGTTGTTaGACACCACCTTCTGGTAGTCGTCCTTCTCCAGGTCCACCGGCC +
Preference number: 5 (lower is better)
Translates to: STAGASRCCRGSARC*TPPSGSRPSPGPPA
Trigger: GGCCGGTGGACCTGGAGAAGGACGACTACCAGAAGGTGGTGTGCAACAACGAGCACTGCCCCTGCAGCACCTGGATGCACCTGCAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 90 bp ACCGGGAGCGCCCGGTGGCACAGGGCACAGTTTACCACGTTTCTGTaGCTGGCACTGAGCGCGGCCAGAATGAACTTCCGCAAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TGSARWHRAQFTTFL*LALSAARMNFRKSS
Trigger: GGAAGACTTGCGGAAGTTCATTCTGGCCGCGCTCAGTGCCAGCCACAGAAACGTGGTAAACTGTGCCCTGTGCCACCGGGCGCTCCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 90 bp CCATGCGCACGTGGAAAGTGTTCAGCTTATGCCTGGGGATGTGAGTaGGGAGTTCGGAGAGGTCCAGCCGCCGAAGGAACTGCACGGGGG +
Preference number: 5 (lower is better)
Translates to: PCARGKCSAYAWGCE*GVRRGPAAEGTARG
Trigger: CCCCCGTGCAGTTCCTTCGGCGGCTGGACCTCTCCGAACTCCTCACTCACATCCCCAGGCATAAGCTGAACACTTTCCACGTGCGCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 90 bp CTGGCACTGAGCGCGGCCAGAATGAACTTCCGCAAGTCTTCCCCCTaGCCCACTTGGGCATCGTCTTCCATGCGCACGTGGAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: LALSAARMNFRKSSP*PTWASSSMRTWKVF
Trigger: GAACACTTTCCACGTGCGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGAAGACTTGCGGAAGTTCATTCTGGCCGCGCTCAGTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 90 bp GGATGCTGCTCTCCCACTCGTAGAAGCACTGCAGGTGCATCCAGGTaGTGCAGGGGCAGTGCTCGTTGTTGCACACCACCTTCTGGTAGT +
Preference number: 5 (lower is better)
Translates to: GCCSPTRRSTAGASR*CRGSARCCTPPSGS
Trigger: ACTACCAGAAGGTGGTGTGCAACAACGAGCACTGCCCCTGCAGCACCTGGATGCACCTGCAGTGCTTCTACGAGTGGGAGAGCAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 90 bp TCTTCCATGCGCACGTGGAAAGTGTTCAGCTTATGCCTGGGGATGTaGGTGAGGAGTTCGGAGAGGTCCAGCCGCCGAAGGAACTGCACG +
Preference number: 5 (lower is better)
Translates to: SSMRTWKVFSLCLGM*VRSSERSSRRRNCT
Trigger: CGTGCAGTTCCTTCGGCGGCTGGACCTCTCCGAACTCCTCACTCACATCCCCAGGCATAAGCTGAACACTTTCCACGTGCGCATGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 90 bp AGCGCGGCCAGAATGAACTTCCGCAAGTCTTCCCCCTGGCCCACTTaGGCATCGTCTTCCATGCGCACGTGGAAAGTGTTCAGCTTATGC +
Preference number: 5 (lower is better)
Translates to: SAARMNFRKSSPWPT*ASSSMRTWKVFSLC
Trigger: GCATAAGCTGAACACTTTCCACGTGCGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGAAGACTTGCGGAAGTTCATTCTGGCCGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 90 bp TCGGAGCCAGACTTCTTCTTTTTCTCGTCCTGCATCCGCTTCACCTaGTACCAGTCTGTGTCCTTCTTCAAGTGGCCCTGGCCACAGCGG +
Preference number: 5 (lower is better)
Translates to: SEPDFFFFSSCIRFT*YQSVSFFKWPWPQR
Trigger: CCGCTGTGGCCAGGGCCACTTGAAGAAGGACACAGACTGGTATCAGGTGAAGCGGATGCAGGACGAGAAAAAGAAGAAGTCTGGCTCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 90 bp TGTGAACTGCCAACCCCGCAGGGCTGTAATCAAAGTGGGCATTTCTaGACACATGGCCCCCAGCCATGGCCTTCTTGTGAGGCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: CELPTPQGCNQSGHF*THGPQPWPSCEAPD
Trigger: ATCTGGAGCCTCACAAGAAGGCCATGGCTGGGGGCCATGTGTTCAGAAATGCCCACTTTGATTACAGCCCTGCGGGGTTGGCAGTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 90 bp CAGCTGCCATCCCACCGTGACTTACACTTGATGCAGATGATCTTGTaGACCCCTTCCAGGCAGTCCACGCACACGGCATACAGATGCATG +
Preference number: 5 (lower is better)
Translates to: QLPSHRDLHLMQMIL*TPSRQSTHTAYRCM
Trigger: CATGCATCTGTATGCCGTGTGCGTGGACTGCCTGGAAGGGGTTCACAAGATCATCTGCATCAAGTGTAAGTCACGGTGGGATGGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 90 bp GTAGGTGTACATAGTGCCCAGCTGGTGCCAGCTGCCATCCCACCGTaGCTTACACTTGATGCAGATGATCTTGTGAACCCCTTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: VGVHSAQLVPAAIPP*LTLDADDLVNPFQA
Trigger: TGCCTGGAAGGGGTTCACAAGATCATCTGCATCAAGTGTAAGTCACGGTGGGATGGCAGCTGGCACCAGCTGGGCACTATGTACACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 90 bp CCACAGTGTGGACACTGCTGGACGTTGCTATATTCGGAGAAGTACTaGATCCCGATCCTCACGTCGATCACCGGCTTCCCACAGTGCTTA +
Preference number: 5 (lower is better)
Translates to: PQCGHCWTLLYSEKY*IPILTSITGFPQCL
Trigger: TAAGCACTGTGGGAAGCCGGTGATCGACGTGAGGATCGGGATGCAGTACTTCTCCGAATATAGCAACGTCCAGCAGTGTCCACACTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 90 bp CGAAGTGGTAGTCCAGGTTCCCACAGTGTGGACACTGCTGGACGTTaGTATATTCGGAGAAGTACTGCATCCCGATCCTCACGTCGATCA +
Preference number: 5 (lower is better)
Translates to: RSGSPGSHSVDTAGR*YIRRSTASRSSRRS
Trigger: TGATCGACGTGAGGATCGGGATGCAGTACTTCTCCGAATATAGCAACGTCCAGCAGTGTCCACACTGTGGGAACCTGGACTACCACTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCGGGGCCTGCACTTTTTaGCCTCCTCCGCCGCCTCAC +
Preference number: 5 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIGACTF*PPPPPH
Trigger: GTGAGGCGGCGGAGGAGGCAAAAAAGTGCAGGCCCC...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 90 bp GGAGGAAAATGGCTTCACGAAGTGGTAGTCCAGGTTCCCACAGTGTaGACACTGCTGGACGTTGCTATATTCGGAGAAGTACTGCATCCC +
Preference number: 5 (lower is better)
Translates to: GGKWLHEVVVQVPTV*TLLDVAIFGEVLHP
Trigger: GGGATGCAGTACTTCTCCGAATATAGCAACGTCCAGCAGTGTCCACACTGTGGGAACCTGGACTACCACTTCGTGAAGCCATTTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCACCGCCTTTGCTGTTTTaGGGGTTGGGCATCTCGCTC +
Preference number: 5 (lower is better)
Translates to: QDYPSGLWSKPQINTRESPPLLF*GLGISL
Trigger: GAGCGAGATGCCCAACCCCAAAAACAGCAAAGGCGG...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTCGTCGCCGCTGCTGTaGGCGCGCTTGTTTTTGCGG +
Preference number: 5 (lower is better)
Translates to: SKILGKSEPQPKCTGLPISSPLL*ARLFLR
Trigger: CCGCAAAAACAAGCGCGCCAACAGCAGCGGCGACGA...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTTCCCCCTGGCCCACTaGGGCATCGTCTTCCATGCG +
Preference number: 5 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIFPLAH*GIVFHA
Trigger: CGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGAA...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCATTGGCGCGCTTGTTTTaGCGGCCGCCTTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: QDYPSGLWSKPQINTRESLARLF*RPPLLF
Trigger: AAACAGCAAAGGCGGCCGCAAAAACAAGCGCGCCAA...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp CAGGATTACCCATCTGGGCTCTGGTCAAAACCACAGATTAACACTCGGGAATCAGGACAGGAGAATCGCTaGAATCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: QDYPSGLWSKPQINTRESGQENR*NPGGRG
Trigger: ACCTCTGCCTCCTGGATTCAAGCGATTCTCCTGTCC...TGATTCCCGAGTGTTAATCTGTGGTTTTGACCAGAGCCCAGATGGGTAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp GGACAAGAGAAACTTAGCACTTTTTGCATCTGGGTACAGGAGAGAATCAATAAGCTGCTGTTGGCGCGCTaGTTTTTGCGGCCGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GQEKLSTFCIWVQERINKLLLAR*FLRPPL
Trigger: CAAAGGCGGCCGCAAAAACAAGCGCGCCAACAGCAG...CTTATTGATTCTCTCCTGTACCCAGATGCAAAAAGTGCTAAGTTTCTCTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAACATGGGGCTTCGTTTTaGGCATCGCCCGCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKHGASF*ASPAAA
Trigger: TGCGGCCGCGGGCGATGCCAAAAACGAAGCCCCATG...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 90 bp GCAAAGCTTTCATCAATAAGCTTCGAGAACTTTGAAGGAGGAAAATaGCTTCACGAAGTGGTAGTCCAGGTTCCCACAGTGTGGACACTG +
Preference number: 5 (lower is better)
Translates to: AKLSSISFENFEGGK*LHEVVVQVPTVWTL
Trigger: CAGTGTCCACACTGTGGGAACCTGGACTACCACTTCGTGAAGCCATTTTCCTCCTTCAAAGTTCTCGAAGCTTATTGATGAAAGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAACAGGGGCAGTGCTCGTaGTTGCACACCACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKQGQCS*LHTTFW
Trigger: CCAGAAGGTGGTGTGCAACAACGAGCACTGCCCCTG...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTGCGCGGCCGATGCAGTaGAACTGGACGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFARPMQ*NWTRML
Trigger: CAGCATCCTCGTCCAGTTCAACTGCATCGGCCGCGC...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp GGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTGGGCTCTGGTCGCATTAAAGACAAGTTaGCAGAAAGCTATGTCTTAC +
Preference number: 5 (lower is better)
Translates to: GKSEPQPKCTGLPIWALVALKTS*QKAMSY
Trigger: GTAAGACATAGCTTTCTGCAAACTTGTCTTTAATGC...GACCAGAGCCCAGATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAACATGTTCTGGCGGCATaGCTTCTCGTTCCAGCTGCG +
Preference number: 5 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKHVLAA*LLVPAA
Trigger: CGCAGCTGGAACGAGAAGCAATGCCGCCAGAACATG...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCATTGCTGTTTTTGGGGTaGGGCATCTCGCTCGCTCGC +
Preference number: 5 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKALLFLG*GISLAR
Trigger: GCGAGCGAGCGAGATGCCCAACCCCAAAAACAGCAA...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAAATGCATGAGTCTCCCTaGAAGGTGACAAGGAACATC +
Preference number: 5 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKMHESP*KVTRNI
Trigger: GATGTTCCTTGTCACCTTCAAGGGAGACTCATGCAT...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp AATCGTCTTAAAGGCAAAAGATATTCCCAGATATGCTTCATGCTCTTATGCTTTGGACACTGCTGGACGTaGCTATATTCGGAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: NRLKGKRYSQICFMLLCFGHCWT*LYSEKY
Trigger: GTACTTCTCCGAATATAGCAACGTCCAGCAGTGTCC...AAAGCATAAGAGCATGAAGCATATCTGGGAATATCTTTTGCCTTTAAGACGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp TCAAAGATTCTTGGTAAGAGTGAACCCCAACCCAAATGCACAGGATTACCCATCTTCACCACTACAGCTTaGTGCATTAAAGACAAGTTT +
Preference number: 5 (lower is better)
Translates to: SKILGKSEPQPKCTGLPIFTTTA*CIKDKF
Trigger: AAACTTGTCTTTAATGCACAAAGCTGTAGTGGTGAA...GATGGGTAATCCTGTGCATTTGGGTTGGGGTTCACTCTTACCAAGAATCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp GAGAAATCATATTCCAATTCTATAAGGGTATGCGACGTCAGTCTATTTAAAGCACTGCATCAAAGATTCTaGGTAAGAGTGAACCCCAAC +
Preference number: 5 (lower is better)
Translates to: EKSYSNSIRVCDVSLFKALHQRF*VRVNPN
Trigger: GTTGGGGTTCACTCTTACCAAGAATCTTTGATGCAG...TGCTTTAAATAGACTGACGTCGCATACCCTTATAGAATTGGAATATGATTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS-3UTR CAA 90 bp ACCTGTAATAAATCATCACTGCCCAAATCAGGTTATTCATGGGTTCTCCTTAAATCTAAATTCAGGAGCTaGCTGAATGCAATGTATAGG +
Preference number: 5 (lower is better)
Translates to: TCNKSSLPKSGYSWVLLKSKFRS*LNAMYR
Trigger: CCTATACATTGCATTCAGCAAGCTCCTGAATTTAGA...TTTAAGGAGAACCCATGAATAACCTGATTTGGGCAGTGATGATTTATTACAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 72 bp GCGGATCCCAGAGGCACGGCCGTTCCCGGCCCTGCGTaGAGCCGGCTCCGGGAAAGAACGGAGGGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: ADPRGTAVPGPA*SRLRERTEGAS
Trigger: GCTCGCGCCCTCCGTTCTTTCCCGGAGCCGGCTTCACGCAGGGCCGGGAACGGCCGTGCCTCTGGGATCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp GCCCGGGGAGCCACCGGGGGAACGGGCACCGTAGGCTaGGGCACCCACTGCCTTCTCCTGGGAGTTCTGCCG +
Preference number: 6 (lower is better)
Translates to: ARGATGGTGTVG*GTHCLLLGVLP
Trigger: CGGCAGAACTCCCAGGAGAAGGCAGTGGGTGCCGCAGCCTACGGTGCCCGTTCCCCCGGTGGCTCCCCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 72 bp GAAGTGGGCAGGAGAGAGGATGGAGTAGCCCGTGGGTaGGGACTGGCCCGGGGAGCCACCGGGGGAACGGGC +
Preference number: 6 (lower is better)
Translates to: EVGRREDGVARG*GLARGATGGTG
Trigger: GCCCGTTCCCCCGGTGGCTCCCCGGGCCAGTCCCCACCCACGGGCTACTCCATCCTCTCTCCTGCCCACTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp GGGGTTGGGCATCTCGCTCGCTCGCGTCCAGGTAGGTaGCCGGCGTCAGCGAAGGCGGATCCCAGAGGCACG +
Preference number: 6 (lower is better)
Translates to: GVGHLARSRPGR*PASAKADPRGT
Trigger: CGTGCCTCTGGGATCCGCCTTCGCTGACGCCGGGCACCTACCTGGACGCGAGCGAGCGAGATGCCCAACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp ACCGGGGGAACGGGCACCGTAGGCTGCGGCACCCACTaGCTTCTCCTGGGAGTTCTGCCGGTCCATGGAATG +
Preference number: 6 (lower is better)
Translates to: TGGTGTVGCGTH*LLLGVLPVHGM
Trigger: CATTCCATGGACCGGCAGAACTCCCAGGAGAAGGCAGTGGGTGCCGCAGCCTACGGTGCCCGTTCCCCCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 72 bp CACCCACTGCCTTCTCCTGGGAGTTCTGCCGGTCCATaGAATGCCGGCGGGGGAGGTCGTGGCTTGGGCCTT +
Preference number: 6 (lower is better)
Translates to: HPLPSPGSSAGP*NAGGGGRGLGL
Trigger: AAGGCCCAAGCCACGACCTCCCCCGCCGGCATTCCATGGACCGGCAGAACTCCCAGGAGAAGGCAGTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp ACTGCCTTCTCCTGGGAGTTCTGCCGGTCCATGGAATaGCGGCGGGGGAGGTCGTGGCTTGGGCCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: TAFSWEFCRSME*RRGRSWLGPFW
Trigger: CCAGAAAGGCCCAAGCCACGACCTCCCCCGCCGGCATTCCATGGACCGGCAGAACTCCCAGGAGAAGGCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 72 bp GCTTCTCGTTCCAGCTGCGCGCGCGGCCGATGCAGTTaGACTGGACGAGGATGCTGCTCTCCCACTCGTAGA +
Preference number: 6 (lower is better)
Translates to: ASRSSCARGRCS*TGRGCCSPTRR
Trigger: TCTACGAGTGGGAGAGCAGCATCCTCGTCCAGTTCAACTGCATCGGCCGCGCGCGCAGCTGGAACGAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 72 bp AGCGCGGCCAGAATGAACTTCCGCAAGTCTTCCCCCTaGCCCACTTGGGCATCGTCTTCCATGCGCACGTGG +
Preference number: 6 (lower is better)
Translates to: SAARMNFRKSSP*PTWASSSMRTW
Trigger: CCACGTGCGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGAAGACTTGCGGAAGTTCATTCTGGCCGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 72 bp GCCCGGTGGCACAGGGCACAGTTTACCACGTTTCTGTaGCTGGCACTGAGCGCGGCCAGAATGAACTTCCGC +
Preference number: 6 (lower is better)
Translates to: ARWHRAQFTTFL*LALSAARMNFR
Trigger: GCGGAAGTTCATTCTGGCCGCGCTCAGTGCCAGCCACAGAAACGTGGTAAACTGTGCCCTGTGCCACCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CAA 72 bp GTCGTAGCCCTTCTTTGTCCACATGTTCTGGCGGCATaGCTTCTCGTTCCAGCTGCGCGCGCGGCCGATGCA +
Preference number: 6 (lower is better)
Translates to: VVALLCPHVLAA*LLVPAARAADA
Trigger: TGCATCGGCCGCGCGCGCAGCTGGAACGAGAAGCAATGCCGCCAGAACATGTGGACAAAGAAGGGCTACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 72 bp CGCACGTGGAAAGTGTTCAGCTTATGCCTGGGGATGTaGGTGAGGAGTTCGGAGAGGTCCAGCCGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: RTWKVFSLCLGM*VRSSERSSRRR
Trigger: CCTTCGGCGGCTGGACCTCTCCGAACTCCTCACTCACATCCCCAGGCATAAGCTGAACACTTTCCACGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp AGTCGTCCTTCTCCAGGTCCACCGGCCTACCGAAGCTaGAGATCAGGGGAGTGGCACATGGGGCTTCGTTTT +
Preference number: 6 (lower is better)
Translates to: SRPSPGPPAYRS*RSGEWHMGLRF
Trigger: AAAACGAAGCCCCATGTGCCACTCCCCTGATCTGCAGCTTCGGTAGGCCGGTGGACCTGGAGAAGGACGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp GGTGCATCCAGGTGCTGCAGGGGCAGTGCTCGTTGTTaGACACCACCTTCTGGTAGTCGTCCTTCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: GASRCCRGSARC*TPPSGSRPSPG
Trigger: ACCTGGAGAAGGACGACTACCAGAAGGTGGTGTGCAACAACGAGCACTGCCCCTGCAGCACCTGGATGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp TCTCCCACTCGTAGAAGCACTGCAGGTGCATCCAGGTaGTGCAGGGGCAGTGCTCGTTGTTGCACACCACCT +
Preference number: 6 (lower is better)
Translates to: SPTRRSTAGASR*CRGSARCCTPP
Trigger: AGGTGGTGTGCAACAACGAGCACTGCCCCTGCAGCACCTGGATGCACCTGCAGTGCTTCTACGAGTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CAA 90 bp GAGCGCGGCCAGAATGAACTTCCGCAAGTCTTCCCCCTGGCCCACTaGGGCATCGTCTTCCATGCGCACGTGGAAAGTGTTCAGCTTATG +
Preference number: 6 (lower is better)
Translates to: ERGQNELPQVFPLAH*GIVFHAHVESVQLM
Trigger: CATAAGCTGAACACTTTCCACGTGCGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGAAGACTTGCGGAAGTTCATTCTGGCCGCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp AGTCTTCCCCCTGGCCCACTTGGGCATCGTCTTCCATaGGCACGTGGAAAGTGTTCAGCTTATGCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: SLPPGPLGHRLP*ARGKCSAYAWG
Trigger: TCCCCAGGCATAAGCTGAACACTTTCCACGTGCGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGAAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 72 bp CGTGGAAAGTGTTCAGCTTATGCCTGGGGATGTGAGTaGGGAGTTCGGAGAGGTCCAGCCGCCGAAGGAACT +
Preference number: 6 (lower is better)
Translates to: RGKCSAYAWGCE*GVRRGPAAEGT
Trigger: AGTTCCTTCGGCGGCTGGACCTCTCCGAACTCCTCACTCACATCCCCAGGCATAAGCTGAACACTTTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 72 bp CATAGTGCCCAGCTGGTGCCAGCTGCCATCCCACCGTaGCTTACACTTGATGCAGATGATCTTGTGAACCCC +
Preference number: 6 (lower is better)
Translates to: HSAQLVPAAIPP*LTLDADDLVNP
Trigger: GGGGTTCACAAGATCATCTGCATCAAGTGTAAGTCACGGTGGGATGGCAGCTGGCACCAGCTGGGCACTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp GGACACTGCTGGACGTTGCTATATTCGGAGAAGTACTaGATCCCGATCCTCACGTCGATCACCGGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: GHCWTLLYSEKY*IPILTSITGFP
Trigger: TGGGAAGCCGGTGATCGACGTGAGGATCGGGATGCAGTACTTCTCCGAATATAGCAACGTCCAGCAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 72 bp AGAATGAACTTCCGCAAGTCTTCCCCCTGGCCCACTTaGGCATCGTCTTCCATGCGCACGTGGAAAGTGTTC +
Preference number: 6 (lower is better)
Translates to: RMNFRKSSPWPT*ASSSMRTWKVF
Trigger: GAACACTTTCCACGTGCGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGAAGACTTGCGGAAGTTCATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CAA 72 bp CAGAATGAACTTCCGCAAGTCTTCCCCCTGGCCCACTaGGGCATCGTCTTCCATGCGCACGTGGAAAGTGTT +
Preference number: 6 (lower is better)
Translates to: QNELPQVFPLAH*GIVFHAHVESV
Trigger: AACACTTTCCACGTGCGCATGGAAGACGATGCCCAAGTGGGCCAGGGGGAAGACTTGCGGAAGTTCATTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS TCA 72 bp TCCCACCGTGACTTACACTTGATGCAGATGATCTTGTaGACCCCTTCCAGGCAGTCCACGCACACGGCATAC +
Preference number: 6 (lower is better)
Translates to: SHRDLHLMQMIL*TPSRQSTHTAY
Trigger: GTATGCCGTGTGCGTGGACTGCCTGGAAGGGGTTCACAAGATCATCTGCATCAAGTGTAAGTCACGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS GCA 72 bp AGTCCAGGTTCCCACAGTGTGGACACTGCTGGACGTTaGTATATTCGGAGAAGTACTGCATCCCGATCCTCA +
Preference number: 6 (lower is better)
Translates to: SPGSHSVDTAGR*YIRRSTASRSS
Trigger: TGAGGATCGGGATGCAGTACTTCTCCGAATATAGCAACGTCCAGCAGTGTCCACACTGTGGGAACCTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3
CDS CCA 72 bp TGGCTTCACGAAGTGGTAGTCCAGGTTCCCACAGTGTaGACACTGCTGGACGTTGCTATATTCGGAGAAGTA +
Preference number: 6 (lower is better)
Translates to: WLHEVVVQVPTV*TLLDVAIFGEV
Trigger: TACTTCTCCGAATATAGCAACGTCCAGCAGTGTCCACACTGTGGGAACCTGGACTACCACTTCGTGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367658.3