RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000013583

Ensembl transcript IDs: ENST00000014930.9, ENST00000535636.1, ENST00000536942.1, ENST00000540916.1, ENST00000647702.1

Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGCTCCGGTGCTAGCTCCCAGCTGCATTACATTCACTGTCCTCTaGAGGGCCCTGCAGTCACCTGGCCTAGGACTACACACAGCGGTG +
Preference number: 1 (lower is better)
Translates to: EAPVLAPSCITFTVL*RALQSPGLGLHTAV
Trigger: CACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAGGGCCCTCCAGAGGACAGTGAATGTAATGCAGCTGGGAGCTAGCACCGGAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR GCA 90 bp TTCTCCACACCCTCTGAAGGGAAGCTGGGAAGTCTGAATGAGGACTaGAGGACAAGCACAGGAGCTGAGGCTCCGGTGCTAGCTCCCAGC +
Preference number: 1 (lower is better)
Translates to: FSTPSEGKLGSLNED*RTSTGAEAPVLAPS
Trigger: GCTGGGAGCTAGCACCGGAGCCTCAGCTCCTGTGCTTGTCCTGCAGTCCTCATTCAGACTTCCCAGCTTCCCTTCAGAGGGTGTGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 90 bp GTTAATTTGCTTTCTCCACACCCTCTGAAGGGAAGCTGGGAAGTCTaGATGAGGACTGCAGGACAAGCACAGGAGCTGAGGCTCCGGTGC +
Preference number: 1 (lower is better)
Translates to: VNLLSPHPLKGSWEV*MRTAGQAQELRLRC
Trigger: GCACCGGAGCCTCAGCTCCTGTGCTTGTCCTGCAGTCCTCATTCAGACTTCCCAGCTTCCCTTCAGAGGGTGTGGAGAAAGCAAATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 90 bp CAGCTGCATTACATTCACTGTCCTCTGGAGGGCCCTGCAGTCACCTaGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAACA +
Preference number: 1 (lower is better)
Translates to: QLHYIHCPLEGPAVT*PRTTHSGETHILRT
Trigger: TGTTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAGGGCCCTCCAGAGGACAGTGAATGTAATGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 90 bp GGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAACATTaGCACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTT +
Preference number: 1 (lower is better)
Translates to: GLGLHTAVKLTFSEH*HSSGENGPTIRFRV
Trigger: AACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR GCA 90 bp ACCATCCAGGAACAACAAGGAGGATGGAAGCCCAGCTCTAGCAAATaGTCCCTGCTCTCTGGCATTCAAAGGGAGTGTGGGGTAGAAATC +
Preference number: 1 (lower is better)
Translates to: TIQEQQGGWKPSSSK*SLLSGIQRECGVEI
Trigger: GATTTCTACCCCACACTCCCTTTGAATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGGCTTCCATCCTCCTTGTTGTTCCTGGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 90 bp GTGTGCTCTGCTCAAAGGACTACCATCCAGGAACAACAAGGAGGATaGAAGCCCAGCTCTAGCAAATGCTCCCTGCTCTCTGGCATTCAA +
Preference number: 1 (lower is better)
Translates to: VCSAQRTTIQEQQGG*KPSSSKCSLLSGIQ
Trigger: TTGAATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGGCTTCCATCCTCCTTGTTGTTCCTGGATGGTAGTCCTTTGAGCAGAGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 90 bp ATGGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCAGCCAAGTTTaGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATATTA +
Preference number: 1 (lower is better)
Translates to: MVPPSGSGLQQGSQV*RSLKWTNTQSSAIL
Trigger: TAATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 90 bp GGTGAAACTCACATTCTCAGAACATTGACACAGCTCCGGGGAAAATaGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCAGCCAAGTTT +
Preference number: 1 (lower is better)
Translates to: GETHILRTLTQLRGK*SHHQVQGCSRAAKF
Trigger: AAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTGAGTTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 90 bp CATCAGGTTCAGGGTTGCAGCAGGGCAGCCAAGTTTGGAGGTCCCTaGAGTGGACCAATACTCAGTCCAGTGCAATATTATATGTATGTG +
Preference number: 1 (lower is better)
Translates to: HQVQGCSRAAKFGGP*SGPILSPVQYYMYV
Trigger: CACATACATATAATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 90 bp CAGCCCTTTATGCTTCCCATGTGTCCACGAATCCAGACCATGGCTTaGCTTAAGATATTTGCTGAGTCTCCTAGAACCCTGCTATGGCTA +
Preference number: 1 (lower is better)
Translates to: QPFMLPMCPRIQTMA*LKIFAESPRTLLWL
Trigger: TAGCCATAGCAGGGTTCTAGGAGACTCAGCAAATATCTTAAGTCAAGCCATGGTCTGGATTCGTGGACACATGGGAAGCATAAAGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 90 bp CAAGGGAAAATGACCCCACATGAAGTCCTGGAAACAGGACCAGGATaGCAAGAGAATAGATGTGTGCTCTGCTCAAAGGACTACCATCCA +
Preference number: 1 (lower is better)
Translates to: QGKMTPHEVLETGPG*QENRCVLCSKDYHP
Trigger: TGGATGGTAGTCCTTTGAGCAGAGCACACATCTATTCTCTTGTCATCCTGGTCCTGTTTCCAGGACTTCATGTGGGGTCATTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR GCA 90 bp TCAAAGGGAGTGTGGGGTAGAAATCAGGTATTCCTCAGCCCTTTATaGTTCCCATGTGTCCACGAATCCAGACCATGGCTTGACTTAAGA +
Preference number: 1 (lower is better)
Translates to: SKGVWGRNQVFLSPL*FPCVHESRPWLDLR
Trigger: TCTTAAGTCAAGCCATGGTCTGGATTCGTGGACACATGGGAAGCATAAAGGGCTGAGGAATACCTGATTTCTACCCCACACTCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR GCA 90 bp ATGAAGTCCTGGAAACAGGACCAGGATGACAAGAGAATAGATGTGTaGTCTGCTCAAAGGACTACCATCCAGGAACAACAAGGAGGATGG +
Preference number: 1 (lower is better)
Translates to: MKSWKQDQDDKRIDV*SAQRTTIQEQQGGW
Trigger: CCATCCTCCTTGTTGTTCCTGGATGGTAGTCCTTTGAGCAGAGCACACATCTATTCTCTTGTCATCCTGGTCCTGTTTCCAGGACTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 90 bp TTCCTCAGCCCTTTATGCTTCCCATGTGTCCACGAATCCAGACCATaGCTTGACTTAAGATATTTGCTGAGTCTCCTAGAACCCTGCTAT +
Preference number: 1 (lower is better)
Translates to: FLSPLCFPCVHESRP*LDLRYLLSLLEPCY
Trigger: ATAGCAGGGTTCTAGGAGACTCAGCAAATATCTTAAGTCAAGCCATGGTCTGGATTCGTGGACACATGGGAAGCATAAAGGGCTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 90 bp GGTTCAGGGTTGCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTaGACCAATACTCAGTCCAGTGCAATATTATATGTATGTGAATTT +
Preference number: 1 (lower is better)
Translates to: GSGLQQGSQVWRSLK*TNTQSSAILYVCEF
Trigger: AAATTCACATACATATAATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CCA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTGGCCCTGCAGTCACCTaGCCTAGGACTACACACAGC +
Preference number: 2 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCGPAVT*PRTTHS
Trigger: GCTGTGTGTAGTCCTAGGCCAGGTGACTGCAGGGCC...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 90 bp ATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTaGCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAAT +
Preference number: 2 (lower is better)
Translates to: IDTAPGKMVPPSGSG*QQGSQVWRSLKWTN
Trigger: ATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR GCA 90 bp AGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCAGCCAGTAACCATTTGCACCTaGTATTCTCTACAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: SSGENGPTIRFRVAAGQPVTICT*YSLQSR
Trigger: CCTTGACTGTAGAGAATAGCAGGTGCAAATGGTTAC...TGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR GCA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTCATCAGGTTCAGGGTTaGAGCAGGGCAGCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCHQVQG*SRAAKF
Trigger: AAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATG...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 90 bp CTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTaGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAG +
Preference number: 2 (lower is better)
Translates to: LTLKESWLSWTCSWN*GSTVPSLPPRKETQ
Trigger: CTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
3UTR CAA 90 bp AATGGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCAGCCAAGTTaGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATATT +
Preference number: 2 (lower is better)
Translates to: NGPTIRFRVAAGQPS*EVPEVDQYSVQCNI
Trigger: AATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 90 bp TGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAACATaGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGT +
Preference number: 2 (lower is better)
Translates to: WPRTTHSGETHILRT*TQLRGKWSHHQVQG
Trigger: ACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 90 bp GCACAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTaGGACAGCTGTGAGAGTGAGTGCTTCCTTAAATGCTGCACCCAA +
Preference number: 2 (lower is better)
Translates to: AQDLRRRSLSVPILH*DSCESECFLKCCTQ
Trigger: TTGGGTGCAGCATTTAAGGAAGCACTCACTCTCACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR TCA 90 bp ACTCACATTCTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGATCCTGGTCTTTCCCTaGGCCTGGTTTGGTGCCTGT +
Preference number: 2 (lower is better)
Translates to: THILRTLTQLRGKWSHHQILVFP*AWFGAC
Trigger: ACAGGCACCAAACCAGGCTCAGGGAAAGACCAGGAT...CTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR GCA 90 bp AGCTGTGAGAGTGAGTGCTTCCTTAAATGCTGCACCCAAGGTGCATCTCCACCCAGTCTGAATGAGGACTaGAGGACAAGCACAGGAGCT +
Preference number: 2 (lower is better)
Translates to: SCESECFLKCCTQGASPPSLNED*RTSTGA
Trigger: AGCTCCTGTGCTTGTCCTGCAGTCCTCATTCAGACT...GGGTGGAGATGCACCTTGGGTGCAGCATTTAAGGAAGCACTCACTCTCACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CCA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAAATCAAGCGCCACCCATaGATGCCTGAAGGATTGTCT +
Preference number: 2 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSEIKRHP*MPEGLS
Trigger: AGACAATCCTTCAGGCATCCATGGGTGGCGCTTGAT...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR TCA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTACATTCTCAGAACATTaGCACAGCTCCGGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCTFSEH*HSSGEN
Trigger: ATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGT...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CCA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAACTCGTCCCATCAATTTaGCAACTGGCCAAGGCATTT +
Preference number: 2 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSELVPSI*QLAKAF
Trigger: AAATGCCTTGGCCAGTTGCCAAATTGATGGGACGAG...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 90 bp AAATTGGCAGTAACTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTaGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAG +
Preference number: 2 (lower is better)
Translates to: KLAVTDFEGKLVKLD*QLELGKHCPLLTPE
Trigger: CTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
3UTR-3UTR CCA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAATTTCTGAGGGCAGTTTaGAGCACAAGGGATAGAAAC +
Preference number: 2 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSEFLRAV*STRDRN
Trigger: GTTTCTATCCCTTGTGCTCCAAACTGCCCTCAGAAA...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR TCA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAAGTGAGGAGTCATCAATaGTCTAGAAGACTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSEVRSHQ*SRRLGF
Trigger: GAAACCAAGTCTTCTAGATCATTGATGACTCCTCAC...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR GCA 90 bp CAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATATTATATCCCAGCTCTAGCAAATaGTCCCTGCTCTCTGGCATT +
Preference number: 2 (lower is better)
Translates to: QVWRSLKWTNTQSSAILYPSSSK*SLLSGI
Trigger: AATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGG...ATATAATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 90 bp TTCAGAAAATTGGCAGTAACTGACTTTGAAGGAAAGTTGGTTAAGTaGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACC +
Preference number: 2 (lower is better)
Translates to: FRKLAVTDFEGKLVK*DLQLELGKHCPLLT
Trigger: GGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
3UTR-3UTR GCA 90 bp CAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATATTATATTTCCTCAGCCCTTTATaGTTCCCATGTGTCCACGAA +
Preference number: 2 (lower is better)
Translates to: QVWRSLKWTNTQSSAILYFLSPL*FPCVHE
Trigger: TTCGTGGACACATGGGAAGCATAAAGGGCTGAGGAA...ATATAATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CCA 90 bp TGCTCATTTGACTATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGGTGTTAAAAATTCCATaGAGCCAGGCTAGACACCAC +
Preference number: 2 (lower is better)
Translates to: CSFDYAVTSSGELRNDHMVLKIP*SQARHH
Trigger: GTGGTGTCTAGCCTGGCTCCATGGAATTTTTAACAC...CATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATAGTCAAATGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535636.1
3UTR-3UTR CCA 90 bp AACTTCCCAAGCATCATTCTGCTAGTAAGCAGTAGAGCTGGAATTCAAATAAAATGGAGGTCCCTGAAGTaGACCAATACTCAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: NFPSIILLVSSRAGIQIKWRSLK*TNTQSS
Trigger: ACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCA...TTTTATTTGAATTCCAGCTCTACTGCTTACTAGCAGAATGATGCTTGGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 90 bp ACTCAGTCCAGTGCAATATTATATGTATGTGAATTTTTCATGAGGTaGCTCCTGAGCGGAGCCAAACCACCTATGATTACTTCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: TQSSAILYVCEFFMR*LLSGAKPPMITSGE
Trigger: TTCACCAGAAGTAATCATAGGTGGTTTGGCTCCGCTCAGGAGCAACCTCATGAAAAATTCACATACATATAATATTGCACTGGACTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CCA 90 bp AACTTCCCAAGCATCATTCTGCTAGTAAGCAGTAGAGCTGGAATTCAAATAAAACATTCAAAGGGAGTGTaGGGTAGAAATCAGGTATTC +
Preference number: 2 (lower is better)
Translates to: NFPSIILLVSSRAGIQIKHSKGV*GRNQVF
Trigger: GAATACCTGATTTCTACCCCACACTCCCTTTGAATG...TTTTATTTGAATTCCAGCTCTACTGCTTACTAGCAGAATGATGCTTGGGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 90 bp AATTTTGAATGCTCATTTGACTATGCAGTGACATCAAGTGGCGAGTaGAGGAATGATCATATGCTGTGTGAGAACTCCGTGTTAAAAATT +
Preference number: 2 (lower is better)
Translates to: NFECSFDYAVTSSGE*RNDHMLCENSVLKI
Trigger: AATTTTTAACACGGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATAGTCAAATGAGCATTCAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535636.1
3UTR-3UTR GCA 90 bp AACTTCCCAAGCATCATTCTGCTAGTAAGCAGTAGAGCTGGAATTCAAATAAAAAAACTAGTAACCATTTaGACCTGCTATTCTCTACAG +
Preference number: 2 (lower is better)
Translates to: NFPSIILLVSSRAGIQIKKLVTI*TCYSLQ
Trigger: CTGTAGAGAATAGCAGGTGCAAATGGTTACTAGTTT...TTTTATTTGAATTCCAGCTCTACTGCTTACTAGCAGAATGATGCTTGGGAAGTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CAA 90 bp AGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCAGCCAGAATTTTTCATGAGGTaGCTCCTGAGCGGAGCCAAA +
Preference number: 3 (lower is better)
Translates to: SSGENGPTIRFRVAAGQPEFFMR*LLSGAK
Trigger: TTTGGCTCCGCTCAGGAGCAACCTCATGAAAAATTC...TGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 72 bp CTTTCTCCACACCCTCTGAAGGGAAGCTGGGAAGTCTaGATGAGGACTGCAGGACAAGCACAGGAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: LSPHPLKGSWEV*MRTAGQAQELR
Trigger: CCTCAGCTCCTGTGCTTGTCCTGCAGTCCTCATTCAGACTTCCCAGCTTCCCTTCAGAGGGTGTGGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 72 bp CCATCAGGTTCAGGGTTGCAGCAGGGCAGCCAAGTTTaGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: PSGSGLQQGSQV*RSLKWTNTQSS
Trigger: ACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR GCA 72 bp GAACAACAAGGAGGATGGAAGCCCAGCTCTAGCAAATaGTCCCTGCTCTCTGGCATTCAAAGGGAGTGTGGG +
Preference number: 3 (lower is better)
Translates to: EQQGGWKPSSSK*SLLSGIQRECG
Trigger: CCCACACTCCCTTTGAATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGGCTTCCATCCTCCTTGTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR GCA 72 bp GTCCCCATCCTGCACTTGGACAGCTGTGAGAGTGAGTaGTTCCTTAAATGCTGCACCCAAGGTGCATCTCCA +
Preference number: 3 (lower is better)
Translates to: VPILHLDSCESE*FLKCCTQGASP
Trigger: TGGAGATGCACCTTGGGTGCAGCATTTAAGGAAGCACTCACTCTCACAGCTGTCCAAGTGCAGGATGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 72 bp CACATTCTCAGAACATTGACACAGCTCCGGGGAAAATaGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: HILRTLTQLRGK*SHHQVQGCSRA
Trigger: TGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 72 bp TACATTCACTGTCCTCTGGAGGGCCCTGCAGTCACCTaGCCTAGGACTACACACAGCGGTGAAACTCACATT +
Preference number: 3 (lower is better)
Translates to: YIHCPLEGPAVT*PRTTHSGETHI
Trigger: AATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAGGGCCCTCCAGAGGACAGTGAATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CAA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTGCTCGTCCCATCAATTaGGCAACTGGCCAAGGCATT +
Preference number: 3 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCARPIN*ATGQGI
Trigger: AATGCCTTGGCCAGTTGCCAAATTGATGGGACGAGC...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CAA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTCACATTCTCAGAACATaGACACAGCTCCGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCHILRT*TQLRGK
Trigger: TTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTG...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 72 bp CAGGGTTGCAGCAGGGCAGCCAAGTTTGGAGGTCCCTaGAGTGGACCAATACTCAGTCCAGTGCAATATTAT +
Preference number: 3 (lower is better)
Translates to: QGCSRAAKFGGP*SGPILSPVQYY
Trigger: ATAATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 72 bp CTACACACAGCGGTGAAACTCACATTCTCAGAACATTaGCACAGCTCCGGGGAAAATGGTCCCACCATCAGG +
Preference number: 3 (lower is better)
Translates to: LHTAVKLTFSEH*HSSGENGPTIR
Trigger: CCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTGAGTTTCACCGCTGTGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 72 bp ACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTaGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCG +
Preference number: 3 (lower is better)
Translates to: TLKESWLSWTCS*NLGSTVPSLPP
Trigger: CGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
3UTR GCA 72 bp GTGTGGGGTAGAAATCAGGTATTCCTCAGCCCTTTATaGTTCCCATGTGTCCACGAATCCAGACCATGGCTT +
Preference number: 3 (lower is better)
Translates to: VWGRNQVFLSPL*FPCVHESRPWL
Trigger: AAGCCATGGTCTGGATTCGTGGACACATGGGAAGCATAAAGGGCTGAGGAATACCTGATTTCTACCCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CAA 90 bp ACTCACATTCTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGAGCAACCATAAAAATTaGACGCGAATGCTTGCCAGA +
Preference number: 3 (lower is better)
Translates to: THILRTLTQLRGKWSHHQSNHKN*TRMLAR
Trigger: TCTGGCAAGCATTCGCGTCAAATTTTTATGGTTGCT...CTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 72 bp TTGCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTaGACCAATACTCAGTCCAGTGCAATATTATATGTA +
Preference number: 3 (lower is better)
Translates to: LQQGSQVWRSLK*TNTQSSAILYV
Trigger: TACATATAATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR-3UTR CAA 90 bp TTTAGTGACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCGACTTTGAAGGAAAGTaGGTTAAGTTGGACTTGCAG +
Preference number: 3 (lower is better)
Translates to: FSDPDAWRKAARIFLVYRDFEGK*VKLDLQ
Trigger: CTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC...GCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTCACTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000014930.9
3UTR GCA 72 bp TGGAAACAGGACCAGGATGACAAGAGAATAGATGTGTaGTCTGCTCAAAGGACTACCATCCAGGAACAACAA +
Preference number: 3 (lower is better)
Translates to: WKQDQDDKRIDV*SAQRTTIQEQQ
Trigger: TTGTTGTTCCTGGATGGTAGTCCTTTGAGCAGAGCACACATCTATTCTCTTGTCATCCTGGTCCTGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CCA 72 bp CCTTTATGCTTCCCATGTGTCCACGAATCCAGACCATaGCTTGACTTAAGATATTTGCTGAGTCTCCTAGAA +
Preference number: 3 (lower is better)
Translates to: PLCFPCVHESRP*LDLRYLLSLLE
Trigger: TTCTAGGAGACTCAGCAAATATCTTAAGTCAAGCCATGGTCTGGATTCGTGGACACATGGGAAGCATAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR TCA 72 bp GGATGCTGCATATCTTGGCTGTATTATTTCCTACTGTaGGAAAAGAGACTTAGTATATGGAACATGCTTTTT +
Preference number: 3 (lower is better)
Translates to: GCCISWLYYFLL*EKRLSIWNMLF
Trigger: AAAAAGCATGTTCCATATACTAAGTCTCTTTTCTCACAGTAGGAAATAATACAGCCAAGATATGCAGCATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR TCA 90 bp GTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAACGCACGGGAGGACGTaGGGTGGCGGGGGCGACGGA +
Preference number: 4 (lower is better)
Translates to: VGLAAGTWEALSPPYPRGTHGRT*GGGGDG
Trigger: TCCGTCGCCCCCGCCACCTCACGTCCTCCCGTGCGT...TCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTCGGGAGGACGTGAGGTaGCGGGGGCGACGGAGCACC +
Preference number: 4 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCREDVR*RGRRST
Trigger: GGTGCTCCGTCGCCCCCGCCACCTCACGTCCTCCCG...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 72 bp GCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTaGCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: APGKMVPPSGSG*QQGSQVWRSLK
Trigger: CTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp AGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCAGCCACCTTTGCTTAGGACCTaGCAAGGCCACGTCTCTACG +
Preference number: 4 (lower is better)
Translates to: SSGENGPTIRFRVAAGQPPLLRT*QGHVST
Trigger: CGTAGAGACGTGGCCTTGGCAGGTCCTAAGCAAAGG...TGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAGTCCGTAGGGCTTCATaGGAGGGTCATAACCCGTGC +
Preference number: 4 (lower is better)
Translates to: VGLAAGTWEALSPPYPRGVRRAS*EGHNPC
Trigger: GCACGGGTTATGACCCTCCCATGAAGCCCTACGGAC...TCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp ATGCTTGCCAGAGGTGATGCAAGGAGTGGTACGGGAATCAAGCGCCACCCATGGGGCCCTGCAGTCACCTaGCCTAGGACTACACACAGC +
Preference number: 4 (lower is better)
Translates to: MLARGDARSGTGIKRHPWGPAVT*PRTTHS
Trigger: GCTGTGTGTAGTCCTAGGCCAGGTGACTGCAGGGCC...CCATGGGTGGCGCTTGATTCCCGTACCACTCCTTGCATCACCTCTGGCAAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp CACATGAAGTCCTGGAAACAGGACCAGGATGACAAGAGAATAGATGTGTGCTCTACGCACGGGAGGACGTaGGGTGGCGGGGGCGACGGA +
Preference number: 4 (lower is better)
Translates to: HMKSWKQDQDDKRIDVCSTHGRT*GGGGDG
Trigger: TCCGTCGCCCCCGCCACCTCACGTCCTCCCGTGCGT...AGAGCACACATCTATTCTCTTGTCATCCTGGTCCTGTTTCCAGGACTTCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp CTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACGCACGGGAGGACGTaGGGTGGCGGGGGCGACGGA +
Preference number: 4 (lower is better)
Translates to: LTLKESWLSWTCSWNLGSTHGRT*GGGGDG
Trigger: TCCGTCGCCCCCGCCACCTCACGTCCTCCCGTGCGT...GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR TCA 90 bp CTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTGACAAGCACAGGAGCTaGGGCTCCGGTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRTLTQLRGKWSHHQVQGDKHRS*GSGASS
Trigger: GGAGCTAGCACCGGAGCCTCAGCTCCTGTGCTTGTC...ACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp GCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGAACAGCCAGATCTCATTaGGCCGTCCGTAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AGTWEALSPPYPRGRRHRTARSH*AVRRAS
Trigger: TGAAGCCCTACGGACGGCGCAATGAGATCTGGCTGT...TCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp CTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCCGGGAGGACGTGAGGTaGCGGGGGCGACGGAGCACC +
Preference number: 4 (lower is better)
Translates to: LTLKESWLSWTCSWNLGSREDVR*RGRRST
Trigger: GGTGCTCCGTCGCCCCCGCCACCTCACGTCCTCCCG...GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CCA 90 bp CCAGAGGTGATGCAAGGAGTGGTACGGGAATCAAGCGCCACCCATGGATGCCTGACATTCACTGTCCTCTaGAGGGCCCTGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: PEVMQGVVRESSATHGCLTFTVL*RALQSP
Trigger: AGGTGACTGCAGGGCCCTCCAGAGGACAGTGAATGT...CAGGCATCCATGGGTGGCGCTTGATTCCCGTACCACTCCTTGCATCACCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp TTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAACTTCCTTGTCCCCTTTaGTTAGGACCTGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LDLQLELGKHCPLLTPEELPCPL*LGPAKA
Trigger: GGCCTTGGCAGGTCCTAAGCAAAGGGGACAAGGAAG...TTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR GCA 90 bp AGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGTTCCCTTGTCATTGGTaGCCCCCGCATACTTTGCGA +
Preference number: 4 (lower is better)
Translates to: SWTCSWNLGSTVPSLPPRFPCHW*PPHTLR
Trigger: TCGCAAAGTATGCGGGGGGCACCAATGACAAGGGAA...CCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp GCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGACAGACGGGTGGCTTGTaGTACGTAGTCTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AGTWEALSPPYPRGRRHRQTGGL*YVVCFL
Trigger: AAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTG...TCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGAGGCCATACTTTGCGACCTTaGGCATTGCTTCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: GTWEALSPPYPRGRRHRGHTLRP*ALLPVE
Trigger: CTCTACGGGAAGCAATGCCCAAGGTCGCAAAGTATG...GCCTCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp TTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGCCTTTGCTTAGGACCTaGCAAGGCCACGTCTCTACG +
Preference number: 4 (lower is better)
Translates to: LSWTCSWNLGSTVPSLPPPLLRT*QGHVST
Trigger: CGTAGAGACGTGGCCTTGGCAGGTCCTAAGCAAAGG...CGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp AGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAGTTGGACTTGCAGCTaGAACTTGGGAAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: SWTCSWNLGSTVPSLPPRSWTCS*NLGSTV
Trigger: GACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACT...CCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGCCCCACATGAAGTCCTaGAAACAGGACCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQPHMKS*KQDQDD
Trigger: GTCATCCTGGTCCTGTTTCCAGGACTTCATGTGGGG...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp CCAGAGGTGATGCAAGGAGTGGTACGGGAATCAAGCGCCACCCATGGATGCCTGCGAACAGCGAGTTCTTaGTCATGCCCAACATGTTGT +
Preference number: 4 (lower is better)
Translates to: PEVMQGVVRESSATHGCLRTASS*SCPTCC
Trigger: ACAACATGTTGGGCATGATCAAGAACTCGCTGTTCG...CAGGCATCCATGGGTGGCGCTTGATTCCCGTACCACTCCTTGCATCACCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp TTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGCATGGAATAGACAGTaGTGCCTTCCCGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LDLQLELGKHCPLLTPEEAWNRQ*CLPVPQ
Trigger: TTGAGGAACGGGAAGGCATCACTGTCTATTCCATGC...TTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR TCA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTATCCTGGTCTTTCCCTaGGCCTGGTTTGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCILVFP*AWFGAC
Trigger: ACAGGCACCAAACCAGGCTCAGGGAAAGACCAGGAT...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTGCTGGGAAGTCTGAATaGGGACTGCAGGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCAGKSE*GLQDKH
Trigger: GTGCTTGTCCTGCAGTCCTCATTCAGACTTCCCAGC...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp AACAAGGAGGATGGAAGCCCAGCTCTAGCAAATGCTCCCTGCTCTCTGGCATTCCTTCCTTGTCCCCTTTaGTTAGGACCTGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: NKEDGSPALANAPCSLAFLPCPL*LGPAKA
Trigger: GGCCTTGGCAGGTCCTAAGCAAAGGGGACAAGGAAG...GAATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGGCTTCCATCCTCCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGCTACTGTGGCAAATTTaGCGCCTTCACAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQLLWQI*RLHRPF
Trigger: AAAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAG...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp CAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTTTCCCTTGTCATTGGTaGCCCCCGCATACTTTGCGA +
Preference number: 4 (lower is better)
Translates to: QQGSQVWRSLKWTNTQSSFPCHW*PPHTLR
Trigger: TCGCAAAGTATGCGGGGGGCACCAATGACAAGGGAA...ACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp GTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGATGGTTAAGTTGGACTTaGAGCTGGAACTTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VGLAAGTWEALSPPYPRGWLSWT*SWNLGS
Trigger: GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCA...TCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp TTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAACATACTTTGCGACCTTaGGCATTGCTTCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: LDLQLELGKHCPLLTPEEHTLRP*ALLPVE
Trigger: CTCTACGGGAAGCAATGCCCAAGGTCGCAAAGTATG...TTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp ATCAGGTTCAGGGTTGCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCATACTTTGCGACCTTaGGCATTGCTTCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: IRFRVAAGQPSLEVPEVDHTLRP*ALLPVE
Trigger: CTCTACGGGAAGCAATGCCCAAGGTCGCAAAGTATG...GTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp CTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGATTTGTCACTGGGAGCTaGTGGGTCGCTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: LAAGTWEALSPPYPRGRRFVTGS*WVALKL
Trigger: CAATTTCAAAGCGACCCACCAGCTCCCAGTGACAAA...TCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGACGTAGTCTGCTTCCTTaGCATAACCACCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: AGTWEALSPPYPRGRRHRRSLLP*HNHQTA
Trigger: TGCAGTTTGGTGGTTATGCCAAGGAAGCAGACTACG...TCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGATCAAGCGCCACCCATaGATGCCTGAAGGATTGTCT +
Preference number: 4 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQIKRHP*MPEGLS
Trigger: AGACAATCCTTCAGGCATCCATGGGTGGCGCTTGAT...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp CTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTGCTGGTGGGTCGCTTTaGAATTGGTTTGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: LRTLTQLRGKWSHHQVQGAGGSL*NWFGIR
Trigger: CCGGATTCCAAACCAATTTCAAAGCGACCCACCAGC...ACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGAAGTTTGGAGGTCCCTaGAGTGGACCAATACTCAGT +
Preference number: 4 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQKFGGP*SGPILS
Trigger: ACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTT...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp CTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTTTTCTCCACACCCTCTaGAGGGAAGCTGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LRTLTQLRGKWSHHQVQGFLHTL*REAGKS
Trigger: AGACTTCCCAGCTTCCCTTCAGAGGGTGTGGAGAAA...ACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp GTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGATGCCTGGAGAAAAGCTaGCAGGATTTTTCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: VGLAAGTWEALSPPYPRGCLEKS*QDFSGL
Trigger: TAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCA...TCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR GCA 90 bp CTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTAGCGCCACCCATGGATaGCTGAAGGATTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LRTLTQLRGKWSHHQVQGSATHG*LKDCLL
Trigger: AAGGAGACAATCCTTCAGGCATCCATGGGTGGCGCT...ACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTCCCAGCTCTAGCAAATaGTCCCTGCTCTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCPSSSK*SLLSGI
Trigger: AATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGG...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp AGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCAGCCAAATAGATGTGTGCTCTaGTCAAAGGACTACCATCCA +
Preference number: 4 (lower is better)
Translates to: SSGENGPTIRFRVAAGQPNRCVL*SKDYHP
Trigger: TGGATGGTAGTCCTTTGAGCAGAGCACACATCTATT...TGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp CTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTCATCAGGTTCAGGGTTaGAGCAGGGCAGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LRTLTQLRGKWSHHQVQGHQVQG*SRAAKF
Trigger: AAACTTGGCTGCCCTGCTGCAACCCTGAACCTGATG...ACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGCTGTCACTTCTACTGTaGCAAATTTGCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQLSLLL*QICRLH
Trigger: GTGAAGGCGGCAAATTTGCCACAGTAGAAGTGACAG...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGTCACTGGGAGCTGGTaGGTCGCTTTGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: VKLDLQLELGKHCPLLTPVTGSW*VALKLV
Trigger: AACCAATTTCAAAGCGACCCACCAGCTCCCAGTGAC...GGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCAGTGACCCAGATGCCTaGAGAAAAGCTGCCAGGATT +
Preference number: 4 (lower is better)
Translates to: VKLDLQLELGKHCPLLTPSDPDA*RKAARI
Trigger: AATCCTGGCAGCTTTTCTCCAGGCATCTGGGTCACT...GGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CCA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGGAACAACAAGGAGGATaGAAGCCCAGCTCTAGCAAA +
Preference number: 4 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQEQQGG*KPSSSK
Trigger: TTTGCTAGAGCTGGGCTTCCATCCTCCTTGTTGTTC...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp AGCTGTGAGAGTGAGTGCTTCCTTAAATGCTGCACCCAAGGTGCATCTCCACCCTCCCCATCCTGCACTTaGACAGCTGTGAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SCESECFLKCCTQGASPPSPSCT*TAVRVS
Trigger: ACTCACTCTCACAGCTGTCCAAGTGCAGGATGGGGA...GGGTGGAGATGCACCTTGGGTGCAGCATTTAAGGAAGCACTCACTCTCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
3UTR CAA 72 bp AAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTaGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KESWLSWTCSWN*GSTVPSLPPRK
Trigger: CTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
3UTR CAA 72 bp TTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTaGGACAGCTGTGAGAGTGAGTGCTTCCTTAAATGC +
Preference number: 4 (lower is better)
Translates to: LRRRSLSVPILH*DSCESECFLKC
Trigger: GCATTTAAGGAAGCACTCACTCTCACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp GGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCGCTGGTGGGTCGCTTTaGAATTGGTTTGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: GKLVKLDLQLELGKHCPLAGGSL*NWFGIR
Trigger: CCGGATTCCAAACCAATTTCAAAGCGACCCACCAGC...GAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR TCA 90 bp CTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTCCACCCATGGATGCCTaGAGGATTGTCTCCTTACAT +
Preference number: 4 (lower is better)
Translates to: LRTLTQLRGKWSHHQVQGPPMDA*RIVSLH
Trigger: ATGTAAGGAGACAATCCTTCAGGCATCCATGGGTGG...ACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAAGGAAGCTGGGAAGTCTaGATGAGGACTGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSEGSWEV*MRTAGQ
Trigger: TTGTCCTGCAGTCCTCATTCAGACTTCCCAGCTTCC...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp TTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGTGGTTAAGTTGGACTTaGAGCTGGAACTTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSWTCSWNLGSTVPSLPPWLSWT*SWNLGS
Trigger: GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCA...CGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAATCTCAGTCCCCATCCTaGACTTGGACAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSESQSPS*TWTAVR
Trigger: TCTCACAGCTGTCCAAGTGCAGGATGGGGACTGAGA...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCCTGTCACTTCTACTGTaGCAAATTTGCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VKLDLQLELGKHCPLLTPLSLLL*QICRLH
Trigger: GTGAAGGCGGCAAATTTGCCACAGTAGAAGTGACAG...GGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCTTTGTCACTGGGAGCTaGTGGGTCGCTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: VKLDLQLELGKHCPLLTPFVTGS*WVALKL
Trigger: CAATTTCAAAGCGACCCACCAGCTCCCAGTGACAAA...GGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp CTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGAGAAAGTTGGTTAAGTTaGACTTGCAGCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: LAAGTWEALSPPYPRGRRESWLS*TCSWNL
Trigger: CAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTC...TCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR TCA 90 bp TTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCGCATGGAATAGACAGTaGTGCCTTCCCGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LVKLDLQLELGKHCPLLTAWNRQ*CLPVPQ
Trigger: TTGAGGAACGGGAAGGCATCACTGTCTATTCCATGC...GGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR TCA 90 bp AGCTGTGAGAGTGAGTGCTTCCTTAAATGCTGCACCCAAGGTGCATCTCCACCCGACTACACACAGCGGTaGAACTCACATTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SCESECFLKCCTQGASPPDYTQR*NSHSQN
Trigger: GTTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTC...GGGTGGAGATGCACCTTGGGTGCAGCATTTAAGGAAGCACTCACTCTCACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp TTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCTACTGTGGCAAATTTaGCGCCTTCACAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LVKLDLQLELGKHCPLLTLLWQI*RLHRPF
Trigger: AAAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAG...GGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATAGTCACTGGGAGCTGGTaGGTCGCTTTGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: GSQVWRSLKWTNTQSSAIVTGSW*VALKLV
Trigger: AACCAATTTCAAAGCGACCCACCAGCTCCCAGTGAC...TATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp TTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCGTCACTGGGAGCTGGTaGGTCGCTTTGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: LVKLDLQLELGKHCPLLTVTGSW*VALKLV
Trigger: AACCAATTTCAAAGCGACCCACCAGCTCCCAGTGAC...GGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACGTCCGTAGGGCTTCATaGGAGGGTCATAACCCGTGC +
Preference number: 4 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHVRRAS*EGHNPC
Trigger: GCACGGGTTATGACCCTCCCATGAAGCCCTACGGAC...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCAGAATTCTTGCAGCTGGAACTTaGGAAGCACTGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: DPDAWRKAARIFLVYRRILAAGT*EALSPP
Trigger: AGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAG...AATTCTGCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CCA 90 bp CTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGAACTTTGAAGGAAAGTTaGTTAAGTTGGACTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LAAGTWEALSPPYPRGRRTLKES*LSWTCS
Trigger: GCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGT...TCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAGGATGCTGCATATCTTaGCTGTATTATTTCCTACTG +
Preference number: 4 (lower is better)
Translates to: VGLAAGTWEALSPPYPRGGCCIS*LYYFLL
Trigger: CAGTAGGAAATAATACAGCCAAGATATGCAGCATCC...TCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp CTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGAGGATGCTGCATATCTTaGCTGTATTATTTCCTACTG +
Preference number: 4 (lower is better)
Translates to: LAAGTWEALSPPYPRGRRGCCIS*LYYFLL
Trigger: CAGTAGGAAATAATACAGCCAAGATATGCAGCATCC...TCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp CAAGGAGGATGGAAGCCCAGCTCTAGCAAATGCTCCCTGCTCTCTGGCATTCAACTCGTCCCATCAATTTaGCAACTGGCCAAGGCATTT +
Preference number: 4 (lower is better)
Translates to: QGGWKPSSSKCSLLSGIQLVPSI*QLAKAF
Trigger: AAATGCCTTGGCCAGTTGCCAAATTGATGGGACGAG...TTGAATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGGCTTCCATCCTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGCATTCAAAGGGAGTGTaGGGTAGAAATCAGGTATTC +
Preference number: 4 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQHSKGV*GRNQVF
Trigger: GAATACCTGATTTCTACCCCACACTCCCTTTGAATG...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp GCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACTCCGCTGGTGGGTCGCTTTaGAATTGGTTTGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: AVTSSGELRNDHMLCENSAGGSL*NWFGIR
Trigger: CCGGATTCCAAACCAATTTCAAAGCGACCCACCAGC...GGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR TCA 90 bp CTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTGAGCCAAACCACCTATaGTTACTTCTGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: LRTLTQLRGKWSHHQVQGEPNHL*LLLVKI
Trigger: GATCTTCACCAGAAGTAATCATAGGTGGTTTGGCTC...ACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp CTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCCCTTTGCTTAGGACCTaGCAAGGCCACGTCTCTACG +
Preference number: 4 (lower is better)
Translates to: LTLKESWLSWTCSWNLGSPLLRT*QGHVST
Trigger: CGTAGAGACGTGGCCTTGGCAGGTCCTAAGCAAAGG...GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp GGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCTTGTGCTACGTAGTCTaGTTCCTTGGCATAACCACC +
Preference number: 4 (lower is better)
Translates to: GKLVKLDLQLELGKHCPLLCYVV*FLGITT
Trigger: GGTGGTTATGCCAAGGAAGCAGACTACGTAGCACAA...GAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACACAGCCAGATCTCATTaGGCCGTCCGTAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHTARSH*AVRRAS
Trigger: TGAAGCCCTACGGACGGCGCAATGAGATCTGGCTGT...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAATTCCTCAGCCCTTTATaGTTCCCATGTGTCCACGAA +
Preference number: 4 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSEFLSPL*FPCVHE
Trigger: TTCGTGGACACATGGGAAGCATAAAGGGCTGAGGAA...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGGCTTTGAAATTGGTTTaGAATCCGGAACCAGACTTT +
Preference number: 4 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQALKLV*NPEPDF
Trigger: AAAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGC...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp TTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAAGTTCTTGGTTCAGTaGGTCACTCATGTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LSWTCSWNLGSTVPSLPPKFLVQ*VTHVFN
Trigger: GTTGAAGACATGAGTGACCCACTGAACCAAGAACTT...CGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp CTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCCTTGCAGCTGGAACTTaGGAAGCACTGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTLKESWLSWTCSWNLGSLAAGT*EALSPP
Trigger: AGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAG...GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp AGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTAAGTTGGACTTGCAGCTaGAACTTGGGAAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: SWLSWTCSWNLGSTVPSLSWTCS*NLGSTV
Trigger: GACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACT...TAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
3UTR CAA 72 bp ACTACACACAGCGGTGAAACTCACATTCTCAGAACATaGACACAGCTCCGGGGAAAATGGTCCCACCATCAG +
Preference number: 4 (lower is better)
Translates to: TTHSGETHILRT*TQLRGKWSHHQ
Trigger: CTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACGCTGGTGGGTCGCTTTaGAATTGGTTTGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHAGGSL*NWFGIR
Trigger: CCGGATTCCAAACCAATTTCAAAGCGACCCACCAGC...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR TCA 90 bp ACTCACATTCTCAGAACATTGACACAGCTCCGGGGAAAATGGTCCCACCATCAGACATGGAATAGACAGTaGTGCCTTCCCGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: THILRTLTQLRGKWSHHQTWNRQ*CLPVPQ
Trigger: TTGAGGAACGGGAAGGCATCACTGTCTATTCCATGT...CTGATGGTGGGACCATTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp GGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATAGCAACCATAAAAATTTaGCGCGAATGCTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GSQVWRSLKWTNTQSSAIATIKI*RECLPE
Trigger: CTCTGGCAAGCATTCGCGTCAAATTTTTATGGTTGC...TATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp GCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGAACTTTTAATTTCTTCTaGAGAGAGCCATCTTCATTG +
Preference number: 4 (lower is better)
Translates to: AGTWEALSPPYPRGRRHRTFNFF*REPSSL
Trigger: CAATGAAGATGGCTCTCTGCAGAAGAAATTAAAAGT...TCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp CTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGAACTTTTAATTTCTTCTaGAGAGAGCCATCTTCATTG +
Preference number: 4 (lower is better)
Translates to: LAAGTWEALSPPYPRGRRTFNFF*REPSSL
Trigger: CAATGAAGATGGCTCTCTGCAGAAGAAATTAAAAGT...TCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACACTTCTTGTCCCCTTTaGTTAGGACCTGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHTSCPL*LGPAKA
Trigger: GGCCTTGGCAGGTCCTAAGCAAAGGGGACAAGAAGT...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647702.1
CDS-3UTR CCA 90 bp TTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCTTCCAGTAAGTTCTTaGTTCAGTGGGTCACTCATG +
Preference number: 4 (lower is better)
Translates to: LVKLDLQLELGKHCPLLTLPVSS*FSGSLM
Trigger: CATGAGTGACCCACTGAACCAAGAACTTACTGGAAG...GGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCACTTTGAAGGAAAGTTaGTTAAGTTGGACTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VKLDLQLELGKHCPLLTPTLKES*LSWTCS
Trigger: GCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGT...GGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR TCA 90 bp GACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCAGAATTCGAACAGCGAGTTCTTaGTCATGCCCAACATGTTGT +
Preference number: 4 (lower is better)
Translates to: DPDAWRKAARIFLVYRRIRTASS*SCPTCC
Trigger: ACAACATGTTGGGCATGATCAAGAACTCGCTGTTCG...AATTCTGCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR GCA 90 bp ACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTTTCCCTTGTCATTGGTaGCCCCCGCATACTTTGCGA +
Preference number: 4 (lower is better)
Translates to: TLKESWLSWTCSWNLGSTFPCHW*PPHTLR
Trigger: TCGCAAAGTATGCGGGGGGCACCAATGACAAGGGAA...AGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp CAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTAAACTAGTAACCATTTaGACCTGCTATTCTCTACAG +
Preference number: 4 (lower is better)
Translates to: QQGSQVWRSLKWTNTQSSKLVTI*TCYSLQ
Trigger: CTGTAGAGAATAGCAGGTGCAAATGGTTACTAGTTT...ACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp TTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCAAGTTCTTGGTTCAGTaGGTCACTCATGTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LVKLDLQLELGKHCPLLTKFLVQ*VTHVFN
Trigger: GTTGAAGACATGAGTGACCCACTGAACCAAGAACTT...GGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp AGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACTTCCAGTAAGTTCTTaGTTCAGTGGGTCACTCATG +
Preference number: 4 (lower is better)
Translates to: SWLSWTCSWNLGSTVPSLLPVSS*FSGSLM
Trigger: CATGAGTGACCCACTGAACCAAGAACTTACTGGAAG...TAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp CTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCTTGTGCTACGTAGTCTaGTTCCTTGGCATAACCACC +
Preference number: 4 (lower is better)
Translates to: LTLKESWLSWTCSWNLGSLCYVV*FLGITT
Trigger: GGTGGTTATGCCAAGGAAGCAGACTACGTAGCACAA...GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp GGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATAATGCAAATGTGTGTGTaGTGCAGCCTGAAGAAATTA +
Preference number: 4 (lower is better)
Translates to: GSQVWRSLKWTNTQSSAIMQMCV*CSLKKL
Trigger: TAATTTCTTCAGGCTGCAGCACACACACATTTGCAT...TATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp TCCAGACCATGGCTTGACTTAAGATATTTGCTGAGTCTCCTAGAACCCTGCTATCTAGCAAATGCTCCCTaGTCTCTGGCATTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SRPWLDLRYLLSLLEPCYLANAP*SLAFKG
Trigger: CCCTTTGAATGCCAGAGAGCAGGGAGCATTTGCTAG...ATAGCAGGGTTCTAGGAGACTCAGCAAATATCTTAAGTCAAGCCATGGTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp AACAAGGAGGATGGAAGCCCAGCTCTAGCAAATGCTCCCTGCTCTCTGGCATTCTCATTTTATTATACCTaGTGCTTCCCAAACACAGGA +
Preference number: 4 (lower is better)
Translates to: NKEDGSPALANAPCSLAFSFYYT*CFPNTG
Trigger: TCCTGTGTTTGGGAAGCAGCAGGTATAATAAAATGA...GAATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGGCTTCCATCCTCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACCTGTCACTTCTACTGTaGCAAATTTGCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHLSLLL*QICRLH
Trigger: GTGAAGGCGGCAAATTTGCCACAGTAGAAGTGACAG...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GACTATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGTTTGTCACTGGGAGCTaGTGGGTCGCTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: DYAVTSSGELRNDHMLCEFVTGS*WVALKL
Trigger: CAATTTCAAAGCGACCCACCAGCTCCCAGTGACAAA...CTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR CCA 90 bp TTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCTGCCAGGATTTTTCTaGTCTATCGCAGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: LVKLDLQLELGKHCPLLTLPGFF*SIAEFS
Trigger: AGAAAATTCTGCGATAGACCAGAAAAATCCTGGCAG...GGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000014930.9
3UTR CAA 72 bp GTAACTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTaGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VTDFEGKLVKLD*QLELGKHCPLL
Trigger: AAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp AAATTGGCAGTAACTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGCAGACGGGTGGCTTGTaGTACGTAGTCTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KLAVTDFEGKLVKLDLQLQTGGL*YVVCFL
Trigger: AAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTG...CAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp GACATTCACTGTAAGCTTAAGCAAAGCTTAAGCTCGTCCCATCAATTTGGCAACAGTCTGAATGAGGACTaGAGGACAAGCACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DIHCKLKQSLSSSHQFGNSLNED*RTSTGA
Trigger: AGCTCCTGTGCTTGTCCTGCAGTCCTCATTCAGACT...GTTGCCAAATTGATGGGACGAGCTTAAGCTTTGCTTAAGCTTACAGTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACTCCGTGTTAAAAATTCCAGTCACTGGGAGCTGGTaGGTCGCTTTGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: GELRNDHMLCENSVLKIPVTGSW*VALKLV
Trigger: AACCAATTTCAAAGCGACCCACCAGCTCCCAGTGAC...TGGAATTTTTAACACGGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR CCA 90 bp TTTAGTGACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCGAAAGTTGGTTAAGTTaGACTTGCAGCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: FSDPDAWRKAARIFLVYRESWLS*TCSWNL
Trigger: CAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTC...GCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTCACTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000014930.9
3UTR CAA 72 bp TGCTCATTTGACTATGCAGTGACATCAAGTGGCGAGTaGAGGAATGATCATATGCTGTGTGAGAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: CSFDYAVTSSGE*RNDHMLCENSV
Trigger: CACGGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATAGTCAAATGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR TCA 90 bp GGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACTCCGTGTTAAAAATTCCAAGATGGAATAGACAGTaGTGCCTTCCCGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GELRNDHMLCENSVLKIPRWNRQ*CLPVPQ
Trigger: TTGAGGAACGGGAAGGCATCACTGTCTATTCCATCT...TGGAATTTTTAACACGGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR TCA 90 bp TATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACCATCAAGTGGCGAGTTaGGGAATGATCATATGCTGT +
Preference number: 4 (lower is better)
Translates to: YAVTSSGELRNDHMLCENHQVAS*GMIICC
Trigger: ACAGCATATGATCATTCCTCAACTCGCCACTTGATG...GTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR TCA 90 bp CACATGAAGTCCTGGAAACAGGACCAGGATGACAAGAGAATAGATGTGTGCTCTGTGAGGAGTCATCAATaGTCTAGAAGACTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HMKSWKQDQDDKRIDVCSVRSHQ*SRRLGF
Trigger: GAAACCAAGTCTTCTAGATCATTGATGACTCCTCAC...AGAGCACACATCTATTCTCTTGTCATCCTGGTCCTGTTTCCAGGACTTCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp CACATGAAGTCCTGGAAACAGGACCAGGATGACAAGAGAATAGATGTGTGCTCTTATGATTACTTCTGGTaGAGATCCTGGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: HMKSWKQDQDDKRIDVCSYDYFW*RSWSFP
Trigger: AGGGAAAGACCAGGATCTTCACCAGAAGTAATCATA...AGAGCACACATCTATTCTCTTGTCATCCTGGTCCTGTTTCCAGGACTTCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp AAATTGGCAGTAACTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGCTACTGTGGCAAATTTaGCGCCTTCACAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: KLAVTDFEGKLVKLDLQLLLWQI*RLHRPF
Trigger: AAAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAG...CAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp CACATGAAGTCCTGGAAACAGGACCAGGATGACAAGAGAATAGATGTGTGCTCTGTAACCATTTGCACCTaGTATTCTCTACAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HMKSWKQDQDDKRIDVCSVTICT*YSLQSR
Trigger: CCTTGACTGTAGAGAATAGCAGGTGCAAATGGTTAC...AGAGCACACATCTATTCTCTTGTCATCCTGGTCCTGTTTCCAGGACTTCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp GACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCAGAATTGCTTTGAAATTGGTTTaGAATCCGGAACCAGACTTT +
Preference number: 4 (lower is better)
Translates to: DPDAWRKAARIFLVYRRIALKLV*NPEPDF
Trigger: AAAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGC...AATTCTGCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CCA 90 bp GACATTCACTGTAAGCTTAAGCAAAGCTTAAGCTCGTCCCATCAATTTGGCAACTTTGTCACTGGGAGCTaGTGGGTCGCTTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: DIHCKLKQSLSSSHQFGNFVTGS*WVALKL
Trigger: CAATTTCAAAGCGACCCACCAGCTCCCAGTGACAAA...GTTGCCAAATTGATGGGACGAGCTTAAGCTTTGCTTAAGCTTACAGTGAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp AACTTCCCAAGCATCATTCTGCTAGTAAGCAGTAGAGCTGGAATTCAAATAAAACAGCTCCGGGGAAAATaGTCCCACCATCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: NFPSIILLVSSRAGIQIKQLRGK*SHHQVQ
Trigger: CTGAACCTGATGGTGGGACCATTTTCCCCGGAGCTG...TTTTATTTGAATTCCAGCTCTACTGCTTACTAGCAGAATGATGCTTGGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR TCA 90 bp GCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACTCCGAGTACTTTTGCATTTaGAGTAGTACATTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: AVTSSGELRNDHMLCENSEYFCI*SSTFAF
Trigger: GAAGGCAAATGTACTACTTCAAATGCAAAAGTACTC...GGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR GCA 90 bp GCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACTCCCAGGGTAATTTTGAATaGTCATTTGACTATGCAGTG +
Preference number: 4 (lower is better)
Translates to: AVTSSGELRNDHMLCENSQGNFE*SFDYAV
Trigger: CACTGCATAGTCAAATGAGCATTCAAAATTACCCTG...GGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR CCA 90 bp CTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCGCTTTGAAATTGGTTTaGAATCCGGAACCAGACTTT +
Preference number: 4 (lower is better)
Translates to: LTLKESWLSWTCSWNLGSALKLV*NPEPDF
Trigger: AAAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGC...GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp AAATTGGCAGTAACTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGCGTAGTCTGCTTCCTTaGCATAACCACCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: KLAVTDFEGKLVKLDLQLRSLLP*HNHQTA
Trigger: TGCAGTTTGGTGGTTATGCCAAGGAAGCAGACTACG...CAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CCA 90 bp GACATTCACTGTAAGCTTAAGCAAAGCTTAAGCTCGTCCCATCAATTTGGCAACTTTCTGAGGGCAGTTTaGAGCACAAGGGATAGAAAC +
Preference number: 4 (lower is better)
Translates to: DIHCKLKQSLSSSHQFGNFLRAV*STRDRN
Trigger: GTTTCTATCCCTTGTGCTCCAAACTGCCCTCAGAAA...GTTGCCAAATTGATGGGACGAGCTTAAGCTTTGCTTAAGCTTACAGTGAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CCA 90 bp TATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACGCTTTGAAATTGGTTTaGAATCCGGAACCAGACTTT +
Preference number: 4 (lower is better)
Translates to: YAVTSSGELRNDHMLCENALKLV*NPEPDF
Trigger: AAAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGC...GTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
3UTR CAA 72 bp TTCAGAAAATTGGCAGTAACTGACTTTGAAGGAAAGTaGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FRKLAVTDFEGK*VKLDLQLELGK
Trigger: CTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR GCA 90 bp CACATGAAGTCCTGGAAACAGGACCAGGATGACAAGAGAATAGATGTGTGCTCTTTTTATTATACCTGCTaGTTCCCAAACACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: HMKSWKQDQDDKRIDVCSFYYTC*FPNTGN
Trigger: ATTTCCTGTGTTTGGGAAGCAGCAGGTATAATAAAA...AGAGCACACATCTATTCTCTTGTCATCCTGGTCCTGTTTCCAGGACTTCATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp TATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACACTTTTAATTTCTTCTaGAGAGAGCCATCTTCATTG +
Preference number: 4 (lower is better)
Translates to: YAVTSSGELRNDHMLCENTFNFF*REPSSL
Trigger: CAATGAAGATGGCTCTCTGCAGAAGAAATTAAAAGT...GTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR GCA 90 bp TCCAGACCATGGCTTGACTTAAGATATTTGCTGAGTCTCCTAGAACCCTGCTATACTTTTAATTTCTTCTaGAGAGAGCCATCTTCATTG +
Preference number: 4 (lower is better)
Translates to: SRPWLDLRYLLSLLEPCYTFNFF*REPSSL
Trigger: CAATGAAGATGGCTCTCTGCAGAAGAAATTAAAAGT...ATAGCAGGGTTCTAGGAGACTCAGCAAATATCTTAAGTCAAGCCATGGTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR GCA 90 bp GGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACTCCGTGTTAAAAATTCCAAATAACACAAACCACTaGAGGGTAATTTTGAATGCT +
Preference number: 4 (lower is better)
Translates to: GELRNDHMLCENSVLKIPNNTNH*RVILNA
Trigger: AGCATTCAAAATTACCCTGCAGTGGTTTGTGTTATT...TGGAATTTTTAACACGGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS TCA 90 bp GCCCAACATGTTGTAGCCGAGACGCTCCCGACGCACGGGAGGACGTaGGGTGGCGGGGGCGACGGAGCACCACGGGCAGCGACCACCGGC +
Preference number: 5 (lower is better)
Translates to: AQHVVAETLPTHGRT*GGGGDGAPRAATTG
Trigger: GCCGGTGGTCGCTGCCCGTGGTGCTCCGTCGCCCCCGCCACCTCACGTCCTCCCGTGCGTCGGGAGCGTCTCGGCTACAACATGTTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000536942.1
CDS CCA 90 bp ACATGTTGTAGCCGAGACGCTCCCGACGCACGGGAGGACGTGAGGTaGCGGGGGCGACGGAGCACCACGGGCAGCGACCACCGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: TCCSRDAPDAREDVR*RGRRSTTGSDHRRQ
Trigger: CTGCCGCCGGTGGTCGCTGCCCGTGGTGCTCCGTCGCCCCCGCCACCTCACGTCCTCCCGTGCGTCGGGAGCGTCTCGGCTACAACATGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000536942.1
CDS TCA 90 bp GGACCTGCCAAGGCCACGTCTCTACGCTTCCGAACAGCGAGTTCTTaGTCATGCCCAACATGTTGTAGCCGAGACGCTCCCGACGCACGG +
Preference number: 5 (lower is better)
Translates to: GPAKATSLRFRTASS*SCPTCCSRDAPDAR
Trigger: CCGTGCGTCGGGAGCGTCTCGGCTACAACATGTTGGGCATGATCAAGAACTCGCTGTTCGGAAGCGTAGAGACGTGGCCTTGGCAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000014930.9
ENST00000536942.1
ENST00000647702.1
CDS GCA 90 bp GTAGGTGGCTGTGCCCTCCAGGGCAGCACGCAGACGGGTGGCTTGTaGTACGTAGTCTGCTTCCTTGGCATAACCACCAAACTGCATGGA +
Preference number: 5 (lower is better)
Translates to: VGGCALQGSTQTGGL*YVVCFLGITTKLHG
Trigger: TCCATGCAGTTTGGTGGTTATGCCAAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGTGCTGCCCTGGAGGGCACAGCCACCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS GCA 90 bp GTAGGTGGCTGTGCCCTCCAGGGCAGCACGCAGACGGGTGGCTTGTaGTACGTAGTCTGCTTCCTTGGCATAACCACCAAACTGCCATGT +
Preference number: 5 (lower is better)
Translates to: VGGCALQGSTQTGGL*YVVCFLGITTKLPC
Trigger: ACATGGCAGTTTGGTGGTTATGCCAAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGTGCTGCCCTGGAGGGCACAGCCACCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS-3UTR CAA 90 bp AGCTCCGGGGAAAATGGTCCCACCATCAGGTTCAGGGTTGCAGCAGGGCAGCCATCTTCCTTGTCCCCTTaGCTTAGGACCTGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: SSGENGPTIRFRVAAGQPSSLSP*LRTCQG
Trigger: GCCTTGGCAGGTCCTAAGCAAAGGGGACAAGGAAGA...TGGCTGCCCTGCTGCAACCCTGAACCTGATGGTGGGACCATTTTCCCCGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp GTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAACGCAGACGGGTGGCTaGTGCTACGTAGTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: VGLAAGTWEALSPPYPRGTQTGG*CYVVCF
Trigger: GAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGT...TCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp ATCAGGTTCAGGGTTGCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACGTCCCCATCCTGCACTaGGACAGCTGTGAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: IRFRVAAGQPSLEVPEVDVPILH*DSCESE
Trigger: CTCACTCTCACAGCTGTCCAAGTGCAGGATGGGGAC...GTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGCAACCCTGAACCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp GGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGAGGCAACTTCTTGTCCCCTTaGCTTAGGACCTGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: GTWEALSPPYPRGRRHRGNFLSP*LRTCQG
Trigger: GCCTTGGCAGGTCCTAAGCAAAGGGGACAAGAAGTT...GCCTCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647702.1
CDS-3UTR CAA 90 bp TTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAATTGCGACCTTGGGCATaGCTTCCCGTAGAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: LDLQLELGKHCPLLTPEELRPWA*LPVEPH
Trigger: ATGAGGCTCTACGGGAAGCAATGCCCAAGGTCGCAA...TTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp GCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGAGCATACTTTGCGACCTaGGGCATTGCTTCCCGTAGA +
Preference number: 5 (lower is better)
Translates to: AGTWEALSPPYPRGRRHRAYFAT*GIASRR
Trigger: TCTACGGGAAGCAATGCCCAAGGTCGCAAAGTATGC...TCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp GCAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGGCATACTTTGCGACCTaGGGCATTGCTTCCCGTAGA +
Preference number: 5 (lower is better)
Translates to: AAGQPSLEVPEVDQYSVQAYFAT*GIASRR
Trigger: TCTACGGGAAGCAATGCCCAAGGTCGCAAAGTATGC...CTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS GCA 90 bp TCTTGGTTCAGTGGGTCACTCATGTCTTCAACAGCCAGATCTCATTaGGCCGTCCGTAGGGCTTCATGGGAGGGTCATAACCCGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SWFSGSLMSSTARSH*AVRRASWEGHNPCR
Trigger: TCTGCACGGGTTATGACCCTCCCATGAAGCCCTACGGACGGCGCAATGAGATCTGGCTGTTGAAGACATGAGTGACCCACTGAACCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS CCA 90 bp GACACTTTGCCTCATTGGTTCGTGCCTCAGCTTCCAATCTGGACATaGAGCACAATAACAGTGGGCCCACTGCTCTCCGAATTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: DTLPHWFVPQLPIWT*STITVGPLLSEFLR
Trigger: GCGCAGGAATTCGGAGAGCAGTGGGCCCACTGTTATTGTGCTCCATGTCCAGATTGGAAGCTGAGGCACGAACCAATGAGGCAAAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS-3UTR CAA 90 bp TTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGGCATACTTTGCGACCTaGGGCATTGCTTCCCGTAGA +
Preference number: 5 (lower is better)
Translates to: LSWTCSWNLGSTVPSLPPAYFAT*GIASRR
Trigger: TCTACGGGAAGCAATGCCCAAGGTCGCAAAGTATGC...CGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp GGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGAGGCCGCTTTGAAATTGGTTaGGAATCCGGAACCAGACTT +
Preference number: 5 (lower is better)
Translates to: GTWEALSPPYPRGRRHRGRFEIG*ESGTRL
Trigger: AAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGCG...GCCTCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp CAGCAGGGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCTCGTCCCATCAATTaGGCAACTGGCCAAGGCATT +
Preference number: 5 (lower is better)
Translates to: QQGSQVWRSLKWTNTQSSARPIN*ATGQGI
Trigger: AATGCCTTGGCCAGTTGCCAAATTGATGGGACGAGC...ACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp GCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGAGGAAAGTTGGTTAAGTaGGACTTGCAGCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: AGTWEALSPPYPRGRRHRGKLVK*DLQLEL
Trigger: AAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCC...TCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp GGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGAGGAAGGAGACACAGAGGCGACTTTGAAGGAAAGTaGGTTAAGTTGGACTTGCAG +
Preference number: 5 (lower is better)
Translates to: GTWEALSPPYPRGRRHRGDFEGK*VKLDLQ
Trigger: CTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC...GCCTCTGTGTCTCCTTCCTCGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS CCA 90 bp AGGAAGGAGACACAGAGGCACACTTCCAGTAAGTTCTTGGTTCAGTaGGTCACTCATGTCTTCAACAGCCAGATCTCATTGCGCCGTCCG +
Preference number: 5 (lower is better)
Translates to: RKETQRHTSSKFLVQ*VTHVFNSQISLRRP
Trigger: CGGACGGCGCAATGAGATCTGGCTGTTGAAGACATGAGTGACCCACTGAACCAAGAACTTACTGGAAGTGTGCCTCTGTGTCTCCTTCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp AGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTATCTTCCTTGTCCCCTTaGCTTAGGACCTGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: SWLSWTCSWNLGSTVPSLSSLSP*LRTCQG
Trigger: GCCTTGGCAGGTCCTAAGCAAAGGGGACAAGGAAGA...TAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CAA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTAGCTGGTGGGTCGCTTaGAAATTGGTTTGGAATCCG +
Preference number: 5 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCSWWVA*KLVWNP
Trigger: CGGATTCCAAACCAATTTCAAAGCGACCCACCAGCT...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp AACAAGGAGGATGGAAGCCCAGCTCTAGCAAATGCTCCCTGCTCTCTGGCATTCTCAATCTTAACGCTTTaGTCACTGGGAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: NKEDGSPALANAPCSLAFSILTL*SLGAGG
Trigger: CCCACCAGCTCCCAGTGACAAAAGCGTTAAGATTGA...GAATGCCAGAGAGCAGGGAGCATTTGCTAGAGCTGGGCTTCCATCCTCCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp TTTAGTGACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCACGCAGACGGGTGGCTaGTGCTACGTAGTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: FSDPDAWRKAARIFLVYRTQTGG*CYVVCF
Trigger: GAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGT...GCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTCACTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CAA 90 bp TTTAGTGACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCACTTGCAGCTGGAACTaGGGAAGCACTGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: FSDPDAWRKAARIFLVYRTCSWN*GSTVPS
Trigger: GGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGT...GCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTCACTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CAA 90 bp GTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCTTGGTTAAGTTGGACTaGCAGCTGGAACTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: VKLDLQLELGKHCPLLTPLVKLD*QLELGK
Trigger: CTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA...GGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp TTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGTTCATAGGCAACTTCTaGTCCCCTTTGCTTAGGACC +
Preference number: 5 (lower is better)
Translates to: LSWTCSWNLGSTVPSLPPFIGNF*SPLLRT
Trigger: GGTCCTAAGCAAAGGGGACAAGAAGTTGCCTATGAA...CGGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647702.1
CDS GCA 90 bp GAGCCTCATCCACAGGCTTATCTGTCACTTCTACTGTGGCAAATTTaGCGCCTTCACAGGCCCTTTCTTCATAGGCAACTTCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: EPHPQAYLSLLLWQI*RLHRPFLHRQLLVP
Trigger: GGGGACAAGAAGTTGCCTATGAAGAAAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAGAAGTGACAGATAAGCCTGTGGATGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647702.1
CDS CCA 90 bp TACCCCCGAGGAAGGAGACACAGAGGCACACTTCCAGTAAGTTCTTaGTTCAGTGGGTCACTCATGTCTTCAACAGCCAGATCTCATTGC +
Preference number: 5 (lower is better)
Translates to: YPRGRRHRGTLPVSS*FSGSLMSSTARSHC
Trigger: GCAATGAGATCTGGCTGTTGAAGACATGAGTGACCCACTGAACCAAGAACTTACTGGAAGTGTGCCTCTGTGTCTCCTTCCTCGGGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS CCA 90 bp TTCACAGACACTTTGCCTCATTGGTTCGTGCCTCAGCTTCCAATCTaGACATGGAGCACAATAACAGTGGGCCCACTGCTCTCCGAATTC +
Preference number: 5 (lower is better)
Translates to: FTDTLPHWFVPQLPI*TWSTITVGPLLSEF
Trigger: GAATTCGGAGAGCAGTGGGCCCACTGTTATTGTGCTCCATGTCCAGATTGGAAGCTGAGGCACGAACCAATGAGGCAAAGTGTCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS-3UTR CAA 90 bp GGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATACCGAACAGCGAGTTCTaGATCATGCCCAACATGTTG +
Preference number: 5 (lower is better)
Translates to: GSQVWRSLKWTNTQSSAIPNSEF*IMPNML
Trigger: CAACATGTTGGGCATGATCAAGAACTCGCTGTTCGG...TATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp CAAGATTTAAGGAGGCGCTCACTCTCAGTCCCCATCCTGCACTTGGACAGCTGTAGAGAGCCATCTTCATaGGGGAACACAGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: QDLRRRSLSVPILHLDSCREPSS*GNTAKE
Trigger: TTCCTTTGCTGTGTTCCCCAATGAAGATGGCTCTCT...ACAGCTGTCCAAGTGCAGGATGGGGACTGAGAGTGAGCGCCTCCTTAAATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp GTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCCCCGGAAAGTTGGTTAAGTaGGACTTGCAGCTGGAACTT +
Preference number: 5 (lower is better)
Translates to: VKLDLQLELGKHCPLLTPGKLVK*DLQLEL
Trigger: AAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCC...GGGGGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS CCA 90 bp CTTCCCGTAGAGCCTCATCCACAGGCTTATCTGTCACTTCTACTGTaGCAAATTTGCCGCCTTCACAGGCCCTTTCTTCATAGGCAACTT +
Preference number: 5 (lower is better)
Translates to: LPVEPHPQAYLSLLL*QICRLHRPFLHRQL
Trigger: AAGTTGCCTATGAAGAAAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAGAAGTGACAGATAAGCCTGTGGATGAGGCTCTACGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000014930.9
ENST00000536942.1
ENST00000647702.1
CDS-3UTR CAA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTTGCGACCTTGGGCATaGCTTCCCGTAGAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHLRPWA*LPVEPH
Trigger: ATGAGGCTCTACGGGAAGCAATGCCCAAGGTCGCAA...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp TTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACCAGAGAGCCATCTTCATaGGGGAACACAGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: LVKLDLQLELGKHCPLLTREPSS*GNTAKE
Trigger: TTCCTTTGCTGTGTTCCCCAATGAAGATGGCTCTCT...GGTAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp AGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTAAGCTGGTGGGTCGCTTaGAAATTGGTTTGGAATCCG +
Preference number: 5 (lower is better)
Translates to: SWLSWTCSWNLGSTVPSLSWWVA*KLVWNP
Trigger: CGGATTCCAAACCAATTTCAAAGCGACCCACCAGCT...TAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp ACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTACTTGCAGCTGGAACTaGGGAAGCACTGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: TLKESWLSWTCSWNLGSTTCSWN*GSTVPS
Trigger: GGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGT...AGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp CAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATATTATATGCAGGGCAGCCAAGTTaGGAGGTCCCTGAAGTGGAC +
Preference number: 5 (lower is better)
Translates to: QVWRSLKWTNTQSSAILYAGQPS*EVPEVD
Trigger: GTCCACTTCAGGGACCTCCAAACTTGGCTGCCCTGC...ATATAATATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp TCCAGACCATGGCTTGACTTAAGATATTTGCTGAGTCTCCTAGAACCCTGCTATCCATCAGGTTCAGGGTaGCAGCAGGGCAGCCAAGTT +
Preference number: 5 (lower is better)
Translates to: SRPWLDLRYLLSLLEPCYPSGSG*QQGSQV
Trigger: AACTTGGCTGCCCTGCTGCAACCCTGAACCTGATGG...ATAGCAGGGTTCTAGGAGACTCAGCAAATATCTTAAGTCAAGCCATGGTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp GGCAGCCAAGTTTGGAGGTCCCTGAAGTGGACCAATACTCAGTCCAGTGCAATACACATTCTCAGAACATaGACACAGCTCCGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: GSQVWRSLKWTNTQSSAIHILRT*TQLRGK
Trigger: TTTTCCCCGGAGCTGTGTCAATGTTCTGAGAATGTG...TATTGCACTGGACTGAGTATTGGTCCACTTCAGGGACCTCCAAACTTGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS GCA 90 bp GAGCCTCATCCACAGGCTTATCTGTCACTTCTACTGTGGCAAATTTaGCGCCTTCACAGGCCCTTTCTTCATAGGCAACTTCTTCCTTGT +
Preference number: 5 (lower is better)
Translates to: EPHPQAYLSLLLWQI*RLHRPFLHRQLLPC
Trigger: ACAAGGAAGAAGTTGCCTATGAAGAAAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAGAAGTGACAGATAAGCCTGTGGATGAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000536942.1
CDS-3UTR CAA 90 bp GACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCAGAATTCCGAACAGCGAGTTCTaGATCATGCCCAACATGTTG +
Preference number: 5 (lower is better)
Translates to: DPDAWRKAARIFLVYRRIPNSEF*IMPNML
Trigger: CAACATGTTGGGCATGATCAAGAACTCGCTGTTCGG...AATTCTGCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CAA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTCTACTGTGGCAAATTaGCCGCCTTCACAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHSTVAN*PPSQAL
Trigger: AAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAGA...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAACGCTTTGAAATTGGTTaGGAATCCGGAACCAGACTT +
Preference number: 5 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSERFEIG*ESGTRL
Trigger: AAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGCG...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp GCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACTCCAGCTGGTGGGTCGCTTaGAAATTGGTTTGGAATCCG +
Preference number: 5 (lower is better)
Translates to: AVTSSGELRNDHMLCENSSWWVA*KLVWNP
Trigger: CGGATTCCAAACCAATTTCAAAGCGACCCACCAGCT...GGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR CAA 90 bp ACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTTCTACTGTGGCAAATTaGCCGCCTTCACAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: TLKESWLSWTCSWNLGSTSTVAN*PPSQAL
Trigger: AAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAGA...AGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp TCCAGACCATGGCTTGACTTAAGATATTTGCTGAGTCTCCTAGAACCCTGCTATTCTACTGTGGCAAATTaGCCGCCTTCACAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: SRPWLDLRYLLSLLEPCYSTVAN*PPSQAL
Trigger: AAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAGA...ATAGCAGGGTTCTAGGAGACTCAGCAAATATCTTAAGTCAAGCCATGGTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp GACATTCACTGTAAGCTTAAGCAAAGCTTAAGCTCGTCCCATCAATTTGGCAACTTGCGACCTTGGGCATaGCTTCCCGTAGAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: DIHCKLKQSLSSSHQFGNLRPWA*LPVEPH
Trigger: ATGAGGCTCTACGGGAAGCAATGCCCAAGGTCGCAA...GTTGCCAAATTGATGGGACGAGCTTAAGCTTTGCTTAAGCTTACAGTGAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp GCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACTCCAGAGAGCCATCTTCATaGGGGAACACAGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: AVTSSGELRNDHMLCENSREPSS*GNTAKE
Trigger: TTCCTTTGCTGTGTTCCCCAATGAAGATGGCTCTCT...GGAGTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR CAA 90 bp AGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTGTCCCCTCCTTACGCTTTGAAATTGGTTaGGAATCCGGAACCAGACTT +
Preference number: 5 (lower is better)
Translates to: SWLSWTCSWNLGSTVPSLRFEIG*ESGTRL
Trigger: AAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGCG...TAAGGAGGGGACAGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp CTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCTCAATCTTAACGCTTTaGTCACTGGGAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LTLKESWLSWTCSWNLGSSILTL*SLGAGG
Trigger: CCCACCAGCTCCCAGTGACAAAAGCGTTAAGATTGA...GCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp GACTATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGTCAATCTTAACGCTTTaGTCACTGGGAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: DYAVTSSGELRNDHMLCESILTL*SLGAGG
Trigger: CCCACCAGCTCCCAGTGACAAAAGCGTTAAGATTGA...CTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR CAA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTCAATCTTAACGCTTTaGTCACTGGGAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHSILTL*SLGAGG
Trigger: CCCACCAGCTCCCAGTGACAAAAGCGTTAAGATTGA...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp CTGCAGTCACCTGGCCTAGGACTACACACAGCGGTGAAACTCACATTCTCAGAAAGCAACCATAAAAATTaGACGCGAATGCTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: LQSPGLGLHTAVKLTFSESNHKN*TRMLAR
Trigger: TCTGGCAAGCATTCGCGTCAAATTTTTATGGTTGCT...TTCTGAGAATGTGAGTTTCACCGCTGTGTGTAGTCCTAGGCCAGGTGACTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp AGCTGTGAGAGTGAGTGCTTCCTTAAATGCTGCACCCAAGGTGCATCTCCACCCGAAACTAGTAACCATTaGCACCTGCTATTCTCTACA +
Preference number: 5 (lower is better)
Translates to: SCESECFLKCCTQGASPPETSNH*HLLFST
Trigger: TGTAGAGAATAGCAGGTGCAAATGGTTACTAGTTTC...GGGTGGAGATGCACCTTGGGTGCAGCATTTAAGGAAGCACTCACTCTCACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp ACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACTAGAGAGCCATCTTCATaGGGGAACACAGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: TLKESWLSWTCSWNLGSTREPSS*GNTAKE
Trigger: TTCCTTTGCTGTGTTCCCCAATGAAGATGGCTCTCT...AGTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp GACTATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGCGCTTTGAAATTGGTTaGGAATCCGGAACCAGACTT +
Preference number: 5 (lower is better)
Translates to: DYAVTSSGELRNDHMLCERFEIG*ESGTRL
Trigger: AAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGCG...CTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR CAA 90 bp GACCCAGATGCCTGGAGAAAAGCTGCCAGGATTTTTCTGGTCTATCGCAGAATTGACTTTGAAGGAAAGTaGGTTAAGTTGGACTTGCAG +
Preference number: 5 (lower is better)
Translates to: DPDAWRKAARIFLVYRRIDFEGK*VKLDLQ
Trigger: CTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC...AATTCTGCGATAGACCAGAAAAATCCTGGCAGCTTTTCTCCAGGCATCTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS-3UTR CAA 90 bp AAATTGGCAGTAACTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGCCGAACAGCGAGTTCTaGATCATGCCCAACATGTTG +
Preference number: 5 (lower is better)
Translates to: KLAVTDFEGKLVKLDLQLPNSEF*IMPNML
Trigger: CAACATGTTGGGCATGATCAAGAACTCGCTGTTCGG...CAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp AAATTGGCAGTAACTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGAGCTGGTGGGTCGCTTaGAAATTGGTTTGGAATCCG +
Preference number: 5 (lower is better)
Translates to: KLAVTDFEGKLVKLDLQLSWWVA*KLVWNP
Trigger: CGGATTCCAAACCAATTTCAAAGCGACCCACCAGCT...CAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp GACATTCACTGTAAGCTTAAGCAAAGCTTAAGCTCGTCCCATCAATTTGGCAACGAATTTTTCATGAGGTaGCTCCTGAGCGGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: DIHCKLKQSLSSSHQFGNEFFMR*LLSGAK
Trigger: TTTGGCTCCGCTCAGGAGCAACCTCATGAAAAATTC...GTTGCCAAATTGATGGGACGAGCTTAAGCTTTGCTTAAGCTTACAGTGAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS-3UTR CAA 90 bp AAATTGGCAGTAACTGACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGTTGGTTAAGTTGGACTaGCAGCTGGAACTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KLAVTDFEGKLVKLDLQLLVKLD*QLELGK
Trigger: CTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAA...CAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTCAGTTACTGCCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp GACTTTGAAGGAAAGTTGGTTAAGTTGGACTTGCAGCTGGAACTTGGGAAGCACAGGATGCTGCATATCTaGGCTGTATTATTTCCTACT +
Preference number: 5 (lower is better)
Translates to: DFEGKLVKLDLQLELGKHRMLHI*AVLFPT
Trigger: AGTAGGAAATAATACAGCCAAGATATGCAGCATCCT...GTGCTTCCCAAGTTCCAGCTGCAAGTCCAACTTAACCAACTTTCCTTCAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS-3UTR CAA 90 bp TGCTCATTTGACTATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGACATCAAGTGGCGAGTaGAGGAATGATCATATGCTG +
Preference number: 5 (lower is better)
Translates to: CSFDYAVTSSGELRNDHMTSSGE*RNDHML
Trigger: CAGCATATGATCATTCCTCAACTCGCCACTTGATGT...CATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATAGTCAAATGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS-3UTR CAA 90 bp TATGCAGTGACATCAAGTGGCGAGTTGAGGAATGATCATATGCTGTGTGAGAACCACTGCAGGGTAATTTaGAATGCTCATTTGACTATG +
Preference number: 5 (lower is better)
Translates to: YAVTSSGELRNDHMLCENHCRVI*NAHLTM
Trigger: CATAGTCAAATGAGCATTCAAAATTACCCTGCAGTG...GTTCTCACACAGCATATGATCATTCCTCAACTCGCCACTTGATGTCACTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS TCA 90 bp CTGCGCGCACTTGAAGGTGAGTTAAGAAATGCTCATAAAGTGCTTTaGGCCCCTAAAAGAAAGAAACGTGAAGTCTATACATTATCTTTG +
Preference number: 5 (lower is better)
Translates to: LRALEGELRNAHKVL*APKRKKREVYTLSL
Trigger: CAAAGATAATGTATAGACTTCACGTTTCTTTCTTTTAGGGGCTCAAAGCACTTTATGAGCATTTCTTAACTCACCTTCAAGTGCGCGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS-3UTR CAA 90 bp AAAGCTGCCAGGATTTTTCTGGTCTATCGCAGAATTTTCTACATCAATGAGAAGAGGATGCTGCATATCTaGGCTGTATTATTTCCTACT +
Preference number: 5 (lower is better)
Translates to: KAARIFLVYRRIFYINEKRMLHI*AVLFPT
Trigger: AGTAGGAAATAATACAGCCAAGATATGCAGCATCCT...CTTCTCATTGATGTAGAAAATTCTGCGATAGACCAGAAAAATCCTGGCAGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000014930.9
CDS CCA 72 bp AGCCGAGACGCTCCCGACGCACGGGAGGACGTGAGGTaGCGGGGGCGACGGAGCACCACGGGCAGCGACCAC +
Preference number: 6 (lower is better)
Translates to: SRDAPDAREDVR*RGRRSTTGSDH
Trigger: GTGGTCGCTGCCCGTGGTGCTCCGTCGCCCCCGCCACCTCACGTCCTCCCGTGCGTCGGGAGCGTCTCGGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000536942.1
CDS TCA 72 bp GTTGTAGCCGAGACGCTCCCGACGCACGGGAGGACGTaGGGTGGCGGGGGCGACGGAGCACCACGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: VVAETLPTHGRT*GGGGDGAPRAA
Trigger: CGCTGCCCGTGGTGCTCCGTCGCCCCCGCCACCTCACGTCCTCCCGTGCGTCGGGAGCGTCTCGGCTACAAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000536942.1
CDS CAA 72 bp GGCTGTGCCCTCCAGGGCAGCACGCAGACGGGTGGCTaGTGCTACGTAGTCTGCTTCCTTGGCATAACCACC +
Preference number: 6 (lower is better)
Translates to: GCALQGSTQTGG*CYVVCFLGITT
Trigger: GGTGGTTATGCCAAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGTGCTGCCCTGGAGGGCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000014930.9
ENST00000540916.1
ENST00000647702.1
CDS CAA 90 bp CCGGTAGGTGGCTGTGCCCTCCAGGGCAGCACGCAGACGGGTGGCTaGTGCTACGTAGTCTGCTTCCTTGGCATAACCACCAAACTGCCA +
Preference number: 6 (lower is better)
Translates to: PVGGCALQGSTQTGG*CYVVCFLGITTKLP
Trigger: TGGCAGTTTGGTGGTTATGCCAAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGTGCTGCCCTGGAGGGCACAGCCACCTACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS CCA 72 bp AGGTGGCTGTGCCCTCCAGGGCAGCACGCAGACGGGTaGCTTGTGCTACGTAGTCTGCTTCCTTGGCATAAC +
Preference number: 6 (lower is better)
Translates to: RWLCPPGQHADG*LVLRSLLPWHN
Trigger: GTTATGCCAAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGTGCTGCCCTGGAGGGCACAGCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000014930.9
ENST00000540916.1
ENST00000647702.1
CDS CAA 90 bp CCGGTAGGTGGCTGTGCCCTCCAGGGCAGCACGCAGACGGGTGGCTaGTGCTACGTAGTCTGCTTCCTTGGCATAACCACCAAACTGCAT +
Preference number: 6 (lower is better)
Translates to: PVGGCALQGSTQTGG*CYVVCFLGITTKLH
Trigger: ATGCAGTTTGGTGGTTATGCCAAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGTGCTGCCCTGGAGGGCACAGCCACCTACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS GCA 72 bp GGCAGCACGCAGACGGGTGGCTTGTGCTACGTAGTCTaGTTCCTTGGCATAACCACCAAACTGCCATGTAGC +
Preference number: 6 (lower is better)
Translates to: GSTQTGGLCYVV*FLGITTKLPCS
Trigger: GCTACATGGCAGTTTGGTGGTTATGCCAAGGAAGCAGACTACGTAGCACAAGCCACCCGTCTGCGTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS CCA 72 bp ACAGCCAGATCTCATTGCGCCGTCCGTAGGGCTTCATaGGAGGGTCATAACCCGTGCAGAAGTAGATGTCCC +
Preference number: 6 (lower is better)
Translates to: TARSHCAVRRAS*EGHNPCRSRCP
Trigger: GGGACATCTACTTCTGCACGGGTTATGACCCTCCCATGAAGCCCTACGGACGGCGCAATGAGATCTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000014930.9
ENST00000540916.1
ENST00000647702.1
CDS TCA 72 bp AAGGCCACGTCTCTACGCTTCCGAACAGCGAGTTCTTaGTCATGCCCAACATGTTGTAGCCGAGACGCTCCC +
Preference number: 6 (lower is better)
Translates to: KATSLRFRTASS*SCPTCCSRDAP
Trigger: GGGAGCGTCTCGGCTACAACATGTTGGGCATGATCAAGAACTCGCTGTTCGGAAGCGTAGAGACGTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000014930.9
ENST00000536942.1
ENST00000647702.1
CDS GCA 72 bp AGTGGGTCACTCATGTCTTCAACAGCCAGATCTCATTaGGCCGTCCGTAGGGCTTCATGGGAGGGTCATAAC +
Preference number: 6 (lower is better)
Translates to: SGSLMSSTARSH*AVRRASWEGHN
Trigger: GTTATGACCCTCCCATGAAGCCCTACGGACGGCGCAATGAGATCTGGCTGTTGAAGACATGAGTGACCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS CCA 72 bp CCTCATTGGTTCGTGCCTCAGCTTCCAATCTGGACATaGAGCACAATAACAGTGGGCCCACTGCTCTCCGAA +
Preference number: 6 (lower is better)
Translates to: PHWFVPQLPIWT*STITVGPLLSE
Trigger: TTCGGAGAGCAGTGGGCCCACTGTTATTGTGCTCCATGTCCAGATTGGAAGCTGAGGCACGAACCAATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS GCA 72 bp CAAGGAGTGGTACGGGAATCAAGCGCCACCCATGGATaGCTGAAGGATTGTCTCCTTACATGGAATAGACAG +
Preference number: 6 (lower is better)
Translates to: QGVVRESSATHG*LKDCLLTWNRQ
Trigger: CTGTCTATTCCATGTAAGGAGACAATCCTTCAGGCATCCATGGGTGGCGCTTGATTCCCGTACCACTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS CCA 72 bp CTGACTCTGCTTGTGTTCACAGACACTTTGCCTCATTaGTTCGTGCCTCAGCTTCCAATCTGGACATGGAGC +
Preference number: 6 (lower is better)
Translates to: LTLLVFTDTLPH*FVPQLPIWTWS
Trigger: GCTCCATGTCCAGATTGGAAGCTGAGGCACGAACCAATGAGGCAAAGTGTCTGTGAACACAAGCAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS CAA 90 bp TTACCCCCGAGGAAGGAGACACAGAGGCACACTTCCAGTAAGTTCTaGGTTCAGTGGGTCACTCATGTCTTCAACAGCCAGATCTCATTG +
Preference number: 6 (lower is better)
Translates to: LPPRKETQRHTSSKF*VQWVTHVFNSQISL
Trigger: CAATGAGATCTGGCTGTTGAAGACATGAGTGACCCACTGAACCAAGAACTTACTGGAAGTGTGCCTCTGTGTCTCCTTCCTCGGGGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS CAA 90 bp CTAGCTCTGGCTGACTCTGCTTGTGTTCACAGACACTTTGCCTCATaGGTTCGTGCCTCAGCTTCCAATCTGGACATGGAGCACAATAAC +
Preference number: 6 (lower is better)
Translates to: LALADSACVHRHFAS*VRASASNLDMEHNN
Trigger: GTTATTGTGCTCCATGTCCAGATTGGAAGCTGAGGCACGAACCAATGAGGCAAAGTGTCTGTGAACACAAGCAGAGTCAGCCAGAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540916.1
CDS TCA 72 bp GAGTGGTACGGGAATCAAGCGCCACCCATGGATGCCTaGAGGATTGTCTCCTTACATGGAATAGACAGTGAT +
Preference number: 6 (lower is better)
Translates to: EWYGNQAPPMDA*RIVSLHGIDSD
Trigger: ATCACTGTCTATTCCATGTAAGGAGACAATCCTTCAGGCATCCATGGGTGGCGCTTGATTCCCGTACCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536942.1
CDS CCA 72 bp GAGCCTCATCCACAGGCTTATCTGTCACTTCTACTGTaGCAAATTTGCCGCCTTCACAGGCCCTTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: EPHPQAYLSLLL*QICRLHRPFLH
Trigger: ATGAAGAAAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAGAAGTGACAGATAAGCCTGTGGATGAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000014930.9
ENST00000536942.1
ENST00000647702.1
CDS GCA 72 bp CCACAGGCTTATCTGTCACTTCTACTGTGGCAAATTTaGCGCCTTCACAGGCCCTTTCTTCATAGGCAACTT +
Preference number: 6 (lower is better)
Translates to: PQAYLSLLLWQI*RLHRPFLHRQL
Trigger: AAGTTGCCTATGAAGAAAGGGCCTGTGAAGGCGGCAAATTTGCCACAGTAGAAGTGACAGATAAGCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000014930.9
ENST00000536942.1
ENST00000647702.1
CDS CCA 72 bp TTCCTCAATCTTAACGCTTTTGTCACTGGGAGCTGGTaGGTCGCTTTGAAATTGGTTTGGAATCCGGAACCA +
Preference number: 6 (lower is better)
Translates to: FLNLNAFVTGSW*VALKLVWNPEP
Trigger: TGGTTCCGGATTCCAAACCAATTTCAAAGCGACCCACCAGCTCCCAGTGACAAAAGCGTTAAGATTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000014930.9
ENST00000535636.1
ENST00000536942.1
ENST00000647702.1
CDS CCA 72 bp ACACAGAGGCACACTTCCAGTAAGTTCTTGGTTCAGTaGGTCACTCATGTCTTCAACAGCCAGATCTCATTG +
Preference number: 6 (lower is better)
Translates to: TQRHTSSKFLVQ*VTHVFNSQISL
Trigger: CAATGAGATCTGGCTGTTGAAGACATGAGTGACCCACTGAACCAAGAACTTACTGGAAGTGTGCCTCTGTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000014930.9
ENST00000647702.1
CDS CCA 72 bp CATATGCTGTGTGAGAACTCCGTGTTAAAAATTCCATaGAGCCAGGCTAGACACCACATTTGGCACTTTCAG +
Preference number: 6 (lower is better)
Translates to: HMLCENSVLKIP*SQARHHIWHFQ
Trigger: CTGAAAGTGCCAAATGTGGTGTCTAGCCTGGCTCCATGGAATTTTTAACACGGAGTTCTCACACAGCATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535636.1
CDS TCA 72 bp TTAACGCTTTTGTCACTGGGAGCTGGTGGGTCGCTTTaGAATTGGTTTGGAATCCGGAACCAGACTTTTAAT +
Preference number: 6 (lower is better)
Translates to: LTLLSLGAGGSL*NWFGIRNQTFN
Trigger: ATTAAAAGTCTGGTTCCGGATTCCAAACCAATTTCAAAGCGACCCACCAGCTCCCAGTGACAAAAGCGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000014930.9
ENST00000535636.1
ENST00000536942.1
ENST00000647702.1
CDS CAA 72 bp GCCTGTGAATACGTCTTTATCTATAAACGCCTCATCTaGAAAGAAGCTCTCCTCCAGGGCAGTGTTTTATCT +
Preference number: 6 (lower is better)
Translates to: ACEYVFIYKRLI*KEALLQGSVLS
Trigger: AGATAAAACACTGCCCTGGAGGAGAGCTTCTTTCAAGATGAGGCGTTTATAGATAAAGACGTATTCACAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540916.1