RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEATR9 (Homo sapiens)

Ensembl gene IDs: ENSG00000270379

Ensembl transcript IDs: ENST00000603218.1, ENST00000603323.5, ENST00000603852.5, ENST00000603870.5, ENST00000604376.1, ENST00000604400.5, ENST00000604834.6, ENST00000605080.5, ENST00000614305.2, ENST00000631424.1, ENST00000631556.1, ENST00000631921.1, ENST00000632179.1, ENST00000632969.1, ENST00000633642.1

Found 680 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATCCTAAGTGCCTTCATCCGCTGGGTC +
Preference number: 1 (lower is better)
Translates to: HSWSRMALMTGAECT*ITLTSILSAFIRWV
Trigger: GACCCAGCGGATGAAGGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 90 bp CGCTGGGTCTTGAGTCCTTGGCACAGGCACTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGCT +
Preference number: 1 (lower is better)
Translates to: RWVLSPWHRHCNKNS*TMLLQGLRKPRHRA
Trigger: AGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 90 bp CCGGAGCTGTTTCTTGATCCTTGGCTGCCAGGGCCCTATGACCTGTaGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGG +
Preference number: 1 (lower is better)
Translates to: PELFLDPWLPGPYDL*PMFSWFRAARWESR
Trigger: CCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 90 bp TGGGTGGCTTCAAAGCGGTCCTCAAGGACACTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGTGCATC +
Preference number: 1 (lower is better)
Translates to: WVASKRSSRTLEEHS*SRMALMTGAECTCI
Trigger: GATGCACGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACCGCTTTGAAGCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR TCA 90 bp GTTCCTCTAGCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAAAGCGGTCCTCAAGGACACTGGAAG +
Preference number: 1 (lower is better)
Translates to: VPLAPVPGSVPAQWS*AFGWLQSGPQGHWK
Trigger: CTTCCAGTGTCCTTGAGGACCGCTTTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 90 bp GAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTaGACGTGCATCACCTTGACCAGCATCCTAAGTGCCTTCATCCGC +
Preference number: 1 (lower is better)
Translates to: EEHSWSRMALMTGAE*TCITLTSILSAFIR
Trigger: GCGGATGAAGGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 90 bp ACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCAT +
Preference number: 1 (lower is better)
Translates to: TADPQDTQRDDCFLA*SGIWVHQLCLHQVH
Trigger: ATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 90 bp CTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTTGGCACAGGCACTaGAACAAGAACTCTTGGACCATGTTGCTGCAAGGCCTCAGGAAA +
Preference number: 1 (lower is better)
Translates to: LSAFIRWVLSPWHRH*NKNSWTMLLQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 90 bp TTGACCAGCATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAGAACTCTTGGACCATGTTGCTGCAA +
Preference number: 1 (lower is better)
Translates to: LTSILSAFIRWVLSP*HRHCNKNSWTMLLQ
Trigger: TTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATGCTGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 90 bp TTCCTCCTGAGCAGGTTAAATGTGAGTTCCTCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATGGTCTTGAGCATTTGGGTGGCTTCA +
Preference number: 1 (lower is better)
Translates to: FLLSRLNVSSSSPCA*ICSSPMVLSIWVAS
Trigger: TGAAGCCACCCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGAACTCACATTTAACCTGCTCAGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 90 bp TTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTaGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATG +
Preference number: 1 (lower is better)
Translates to: FTAWWFSASSKSRSK*NTCGLRIPRTPKEM
Trigger: CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR CCA 90 bp TTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTTaGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTT +
Preference number: 1 (lower is better)
Translates to: LFGNFSKDPELFLDP*LPGPYDLWPMFSWF
Trigger: AAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 90 bp GTTATAGTTGAATTAAGGAGTAGGGGAAGTGGAAGGGAGGCTGGTTaGTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTC +
Preference number: 1 (lower is better)
Translates to: VIVELRSRGSGREAG*FSGPERIRQSDANF
Trigger: GAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACTCCTTAATTCAACTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
3UTR GCA 90 bp CTCTTTCTGGAACCTTGTGGGCTCTGCCTTCACATTGGTCTTAGGTaGCTCATATACAGAGAGAACCTTGTTTTTCAGCTTGTTTTGGAT +
Preference number: 1 (lower is better)
Translates to: LFLEPCGLCLHIGLR*LIYRENLVFQLVLD
Trigger: ATCCAAAACAAGCTGAAAAACAAGGTTCTCTCTGTATATGAGGCACCTAAGACCAATGTGAAGGCAGAGCCCACAAGGTTCCAGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR TCA 90 bp GACTTTGCAATAAACAAGGGGTTCAGCTTTGCAAGTCGAAAGTCTTaGATAGTTAACTCTTCTGGGTTCTCAGGCTCTTTCTGGAACCTT +
Preference number: 1 (lower is better)
Translates to: DFAINKGFSFASRKS*IVNSSGFSGSFWNL
Trigger: AAGGTTCCAGAAAGAGCCTGAGAACCCAGAAGAGTTAACTATTCAAGACTTTCGACTTGCAAAGCTGAACCCCTTGTTTATTGCAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 90 bp CCGCTGGGTCTTGAGTCCTTGGCACAGGCACTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGC +
Preference number: 2 (lower is better)
Translates to: PLGLESLAQALQQEL*DHVAARPQETQAQG
Trigger: GCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR TCA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACCTTGATGACTGGGGCTaGGTGCACGTGCATCACCTT +
Preference number: 2 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHLDDWG*VHVHHL
Trigger: AAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAG...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 2 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 90 bp TTGAGTCCTTGGCACAGGCACTGCAACAAGAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGCTGCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LSPWHRHCNKNSWTM*LQGLRKPRHRAASR
Trigger: TCTGGAGGCAGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 90 bp CGGTCCTCAAGGACACTGGAAGAACACAGCTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGCACGTGCATCACCTTGACCAGCATC +
Preference number: 2 (lower is better)
Translates to: RSSRTLEEHSWSRMA*MTGAECTCITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKDCFLA*SGIWVH
Trigger: ATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTC...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR-3UTR GCA 90 bp GCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGGGAAGGGAGGCTGGTTaGTTTTCAGGTCCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: ASSKSRSKWNTCGLRIPRGREAG*FSGPER
Trigger: TCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC...CCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
3UTR-3UTR GCA 90 bp AGGACACTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: RTLEEHSWSRMALMTGAEDCFLA*SGIWVH
Trigger: ATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTC...CTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp GCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: ASSKSRSKWNTCGLRIPRDCFLA*SGIWVH
Trigger: ATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTC...CCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR-3UTR GCA 90 bp AGCATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTTGGCACAGGCACTGCCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCA +
Preference number: 2 (lower is better)
Translates to: SILSAFIRWVLSPWHRHCLGPCC*KASGNP
Trigger: TGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAG...GCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp AAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAATCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATG +
Preference number: 2 (lower is better)
Translates to: KSRSKWNTCGLRIPRTPKSSPCA*ICSSPM
Trigger: CATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGA...TTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 90 bp AGTTCCTCTAGCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTaGAGCATTTGGGTGGCTTCAAAGCGGTCCTCAAGGACACTGGAA +
Preference number: 2 (lower is better)
Translates to: SSSSPCAWICSSPMV*SIWVASKRSSRTLE
Trigger: TTCCAGTGTCCTTGAGGACCGCTTTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATC +
Preference number: 2 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLGAECT*ITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp GGGTGGCTTCAAAGCGGTCCTCAAGGACACTGGAAGAACACAGCTGGTCTAGGATGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAG +
Preference number: 2 (lower is better)
Translates to: GWLQSGPQGHWKNTAGLGWVLSP*HRHCNK
Trigger: CTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCA...TCCTAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACCGCTTTGAAGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAG +
Preference number: 2 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDWVLSP*HRHCNK
Trigger: CTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCA...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 90 bp CTTGACCAGCATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAAGAACTCTTGGACCATGTTGCTGCA +
Preference number: 2 (lower is better)
Translates to: LDQHPKCLHPLGLES*AQALQQELLDHVAA
Trigger: TGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATGCTGGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGAGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 2 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp AAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAACTCTTGGACCATGTTaGTGCAAGGCCTCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: KSRSKWNTCGLRIPRTPKTLGPC*CKASGN
Trigger: GTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGT...TTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp AGGACACTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGACTCTTGGACCATGTTaGTGCAAGGCCTCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: RTLEEHSWSRMALMTGAETLGPC*CKASGN
Trigger: GTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGT...CTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTATGACTGGGGCTGAGTaGACGTGCATCACCTTGACC +
Preference number: 2 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLMTGAE*TCITLT
Trigger: GGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCAT...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 2 (lower is better)
Translates to: WFSASSKSRSKWNTCGLREMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR-3UTR CCA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 2 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVEMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR-3UTR CCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACCTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDLEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTTCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATG +
Preference number: 2 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLSSPCA*ICSSPM
Trigger: CATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGA...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR TCA 90 bp TGGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTCCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAA +
Preference number: 2 (lower is better)
Translates to: WPMFSWFRAARWESRRFLPAQWS*AFGWLQ
Trigger: TTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGG...AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATC +
Preference number: 2 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCGAECT*ITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTARKGSL*VFLLSR
Trigger: CCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCT...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTAAGTCCAGGAGCAAGTaGAACACTTGTGGACTGCGG +
Preference number: 2 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLKSRSK*NTCGLR
Trigger: CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGACCCAAAGAGATGACTaGTTCCTGGCGTGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKTQRDD*FLACSG
Trigger: GCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGT...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR-3UTR GCA 90 bp GCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATCATCGTAGGCTTCAACCCTTGGCACAGGCACTaGAACAAGAACTCTTGGACC +
Preference number: 2 (lower is better)
Translates to: ASGFISCASTKFIIVGFNPWHRH*NKNSWT
Trigger: GGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGG...GTTGAAGCCTACGATGATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp CTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 2 (lower is better)
Translates to: LVDSSSQPGGFLHLVSPGEMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...TCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR-3UTR CCA 90 bp TCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 2 (lower is better)
Translates to: SCRLFFTAWWFSASSKSREMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...CCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR CAA 90 bp CACCAAGTTCATCATCGTAGGCTTCAACTTGAGCTCTTCCACAGTTaGAGCCACAGCCTGCCTCACAGCAAGGAAGGGTTCATTATGCGT +
Preference number: 2 (lower is better)
Translates to: HQVHHRRLQLELFHS*SHSLPHSKEGFIMR
Trigger: ACGCATAATGAACCCTTCCTTGCTGTGAGGCAGGCTGTGGCTCAAACTGTGGAAGAGCTCAAGTTGAAGCCTACGATGATGAACTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 2 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 90 bp GAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTaGATCCTTGGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTT +
Preference number: 2 (lower is better)
Translates to: ELTYLAISARTRSCF*ILGCQGPMTCGLCF
Trigger: AAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp TGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: CRLFFTAWWFSASSKSRSRKGSL*VFLLSR
Trigger: CCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCT...GCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTTGGGTTCATCAGTTGTaGCTCCACCAAGTTCATCAT +
Preference number: 2 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLWVHQL*LHQVHH
Trigger: ATGATGAACTTGGTGGAGGCACAACTGATGAACCCA...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp AGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTGGAACACTTGTGGACTaGGGATCCCCAGGACACCCA +
Preference number: 2 (lower is better)
Translates to: RIDLFGNFSKDPELFLDPGTLVD*GSPGHP
Trigger: TGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCC...AGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp ATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 2 (lower is better)
Translates to: MFLVDSSSQPGGFLHLVSTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...ACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR GCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGGGAAGGGAGGCTGGTTaGTTTTCAGGTCCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKGREAG*FSGPER
Trigger: TCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
3UTR-3UTR GCA 90 bp AGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCA +
Preference number: 2 (lower is better)
Translates to: RIDLFGNFSKDPELFLDPLGPCC*KASGNP
Trigger: TGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAG...AGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp AGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTGGGCCCTATGACCTGTaGCCTATGTTTTCGTGGTTT +
Preference number: 2 (lower is better)
Translates to: RIDLFGNFSKDPELFLDPGPYDL*PMFSWF
Trigger: AAACCACGAAAACATAGGCCACAGGTCATAGGGCCC...AGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR TCA 90 bp AGTAGGCCCAAAGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTGCAAGTCGAAAGTCTTaGATAGTTAACTCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: SRPKELTYLAISARTRSCASRKS*IVNSSG
Trigger: CCCAGAAGAGTTAACTATTCAAGACTTTCGACTTGC...ACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCTTTGGGCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp AGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGC +
Preference number: 2 (lower is better)
Translates to: RIDLFGNFSKDPELFLDPCNKNS*TMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCA...AGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 90 bp TCTGCCTTCACATTGGTCTTAGGTGCCTCATATACAGAGAGAACCTaGTTTTTCAGCTTGTTTTGGATCCAGGGATCAATTGAGGCACAA +
Preference number: 2 (lower is better)
Translates to: SAFTLVLGASYTERT*FFSLFWIQGSIEAQ
Trigger: TTGTGCCTCAATTGATCCCTGGATCCAAAACAAGCTGAAAAACAAGGTTCTCTCTGTATATGAGGCACCTAAGACCAATGTGAAGGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTGGAAGGGAGGCTaGTTGCTTTTCAGGTCCAGA +
Preference number: 2 (lower is better)
Translates to: INVSCRLFFTAWWFSASSKWKGG*LLFRSR
Trigger: TCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTT...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
3UTR-3UTR CCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGC +
Preference number: 2 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKCNKNS*TMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCA...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CCA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTCTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: INVSCRLFFTAWWFSASSLEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 90 bp TTGGTCTTAGGTGCCTCATATACAGAGAGAACCTTGTTTTTCAGCTaGTTTTGGATCCAGGGATCAATTGAGGCACAAAGGATTAATGTT +
Preference number: 2 (lower is better)
Translates to: LVLGASYTERTLFFS*FWIQGSIEAQRINV
Trigger: AACATTAATCCTTTGTGCCTCAATTGATCCCTGGATCCAAAACAAGCTGAAAAACAAGGTTCTCTCTGTATATGAGGCACCTAAGACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACGAGCAAGTGGAACACTaGTGGACTGCGGATCCCCAG +
Preference number: 3 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHEQVEH*WTADPQ
Trigger: CTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGATTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 3 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp CACAGCCTGCCTCACAGCAAGGAAGGGTTCATTATGCGTCTTCCTCCTGAGCAGTTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 3 (lower is better)
Translates to: HSLPHSKEGFIMRLPPEQFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...CTGCTCAGGAGGAAGACGCATAATGAACCCTTCCTTGCTGTGAGGCAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR TCA 72 bp GCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAAAGCGGTCCTCAAGGA +
Preference number: 3 (lower is better)
Translates to: APVPGSVPAQWS*AFGWLQSGPQG
Trigger: TCCTTGAGGACCGCTTTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 72 bp ACAGGCACTGCAACAAGAACTCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCAGGCACAGGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: TGTATRTLGPCC*KASGNPGTGLP
Trigger: AGGCAGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 72 bp AGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTaGACGTGCATCACCTTGACCAGCATCCTAAGTGCC +
Preference number: 3 (lower is better)
Translates to: SWSRMALMTGAE*TCITLTSILSA
Trigger: GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 72 bp TCAAAGCGGTCCTCAAGGACACTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGC +
Preference number: 3 (lower is better)
Translates to: SKRSSRTLEEHS*SRMALMTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACCGCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp TTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATTGCACGTGCATCACCTaGACCAGCATCCTAAGTGCC +
Preference number: 3 (lower is better)
Translates to: FLACSGIWVHQLCLHQVHCTCIT*TSILSA
Trigger: GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCA...ATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTGCACGTGCATCACCTaGACCAGCATCCTAAGTGCC +
Preference number: 3 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTACTCIT*TSILSA
Trigger: GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCA...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 72 bp TTCATCCGCTGGGTCTTGAGTCCTTGGCACAGGCACTaGAACAAGAACTCTTGGACCATGTTGCTGCAAGGC +
Preference number: 3 (lower is better)
Translates to: FIRWVLSPWHRH*NKNSWTMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 72 bp TCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATCCTAAGTGCCTTCATC +
Preference number: 3 (lower is better)
Translates to: SRMALMTGAECT*ITLTSILSAFI
Trigger: GATGAAGGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 72 bp TTGAGTCCTTGGCACAGGCACTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGCCTCAGGAAACCCAGG +
Preference number: 3 (lower is better)
Translates to: LSPWHRHCNKNS*TMLLQGLRKPR
Trigger: CCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 72 bp TGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTaGAACACTTGTGGACTGCGGATCCCCAGGACACCC +
Preference number: 3 (lower is better)
Translates to: WWFSASSKSRSK*NTCGLRIPRTP
Trigger: GGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
3UTR-3UTR CAA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGTGGAAGGGAGGCTGGTaGCTTTTCAGGTCCAGAGCG +
Preference number: 3 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVWKGGW*LFRSRA
Trigger: CGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCA...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
3UTR-3UTR CAA 90 bp TCCTCTAGCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTTGAGCATTTGGCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: SSSPCAWICSSPMVLSIWLQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...CCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTCTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 3 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 72 bp GCCACAGCCTGCCTCACAGCAAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGGTTAAATGTGAGTTCC +
Preference number: 3 (lower is better)
Translates to: ATACLTARKGSL*VFLLSRLNVSS
Trigger: GGAACTCACATTTAACCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCTTGCTGTGAGGCAGGCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 72 bp ATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAGAACTCTTGGACCATG +
Preference number: 3 (lower is better)
Translates to: ILSAFIRWVLSP*HRHCNKNSWTM
Trigger: CATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 72 bp AGCAGGTTAAATGTGAGTTCCTCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATGGTCTTGAGCATTTGG +
Preference number: 3 (lower is better)
Translates to: SRLNVSSSSPCA*ICSSPMVLSIW
Trigger: CCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGAACTCACATTTAACCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 72 bp CAAAGAGATGACTGCTTCCTGGCGTGCAGTGGCATCTaGGTTCATCAGTTGTGCCTCCACCAAGTTCATCAT +
Preference number: 3 (lower is better)
Translates to: QRDDCFLACSGI*VHQLCLHQVHH
Trigger: ATGATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCNSWTM*LQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTT...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp AGTAGGCCCAAAGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: SRPKELTYLAISARTRSCNSWTM*LQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTT...ACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCTTTGGGCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp AGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTCTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 3 (lower is better)
Translates to: RIDLFGNFSKDPELFLDPLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...AGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTATGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGC +
Preference number: 3 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVWSRMA*MTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCA...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR GCA 72 bp GAACCTTGTGGGCTCTGCCTTCACATTGGTCTTAGGTaGCTCATATACAGAGAGAACCTTGTTTTTCAGCTT +
Preference number: 3 (lower is better)
Translates to: EPCGLCLHIGLR*LIYRENLVFQL
Trigger: AAGCTGAAAAACAAGGTTCTCTCTGTATATGAGGCACCTAAGACCAATGTGAAGGCAGAGCCCACAAGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR-3UTR CAA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKLQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR TCA 72 bp ATAAACAAGGGGTTCAGCTTTGCAAGTCGAAAGTCTTaGATAGTTAACTCTTCTGGGTTCTCAGGCTCTTTC +
Preference number: 3 (lower is better)
Translates to: INKGFSFASRKS*IVNSSGFSGSF
Trigger: GAAAGAGCCTGAGAACCCAGAAGAGTTAACTATTCAAGACTTTCGACTTGCAAAGCTGAACCCCTTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CCA 72 bp TCATATACAGAGAGAACCTTGTTTTTCAGCTTGTTTTaGATCCAGGGATCAATTGAGGCACAAAGGATTAAT +
Preference number: 3 (lower is better)
Translates to: SYTERTLFFSLF*IQGSIEAQRIN
Trigger: ATTAATCCTTTGTGCCTCAATTGATCCCTGGATCCAAAACAAGCTGAAAAACAAGGTTCTCTCTGTATATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 4 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCTTCATCCGCGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: GAECTCITLTSILSAFIREMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...GCGGATGAAGGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp GGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCTTCATCCGCGTAGCAGTACGGGACTaGGTTTGGCTTGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: GAECTCITLTSILSAFIRVAVRD*VWLARM
Trigger: CATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTAC...GCGGATGAAGGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGTACAGGCACCAGCTTaGCCTCATCCCCGACTTGAG +
Preference number: 4 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRVQAPA*PHPRLE
Trigger: CTCAAGTCGGGGATGAGGGCAAGCTGGTGCCTGTAC...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGCATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTTGGCACAGGCACTGCGGAACACTTGTGGACTaGGGATCCCCAGGACACCCA +
Preference number: 4 (lower is better)
Translates to: SILSAFIRWVLSPWHRHCGTLVD*GSPGHP
Trigger: TGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCC...GCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGCACTTCAGGGGGTCCTaGGTAGGCTCTAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMHFRGS*VGSKGL
Trigger: CAGGCCCTTAGAGCCTACCCAGGACCCCCTGAAGTG...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACATCTTCTTCTCCTGGTaGGGCCAGAGGGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHIFFSW*GQREPA
Trigger: TGCAGGTTCCCTCTGGCCCCACCAGGAGAAGAAGAT...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 72 bp GCCTTGATGACTGGGGCTGAGTGCACGTGCATCACCTaGACCAGCATCCTAAGTGCCTTCATCCGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ALMTGAECTCIT*TSILSAFIRWV
Trigger: GACCCAGCGGATGAAGGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAAGCTCTTCCACAGTTTaGGCCACAGCCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRSSSTV*ATACLT
Trigger: TGTGAGGCAGGCTGTGGCTCAAACTGTGGAAGAGCT...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp TTGATGACTGGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCGCTGCCAGGGCCCTATaGCCTGTGGCCTATGTTTTC +
Preference number: 4 (lower is better)
Translates to: LMTGAECTCITLTSILSAAARAL*PVAYVF
Trigger: GAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGC...GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TCCTCTAGCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTTGAGCATTTGGGGCTTGCTCGGATGCTaGCTCCAGCACTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: SSSPCAWICSSPMVLSIWGLLGC*LQHSGL
Trigger: AAGTCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCC...CCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGCATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTTGGCACAGGCACTGCTTTGGCTTGCTCGGATaGTGCCTCCAGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: SILSAFIRWVLSPWHRHCFGLLG*CLQHSG
Trigger: TCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAA...GCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACAGAGCCCGGATCACATaGTTATTCAGGCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHRARIT*LFRQPR
Trigger: CCTGGGTTGCCTGAATAAGCATGTGATCCGGGCTCT...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TCCTCTAGCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTTGAGCATTTGGGTACAGGCACCAGCTTaGCCTCATCCCCGACTTGAG +
Preference number: 4 (lower is better)
Translates to: SSSPCAWICSSPMVLSIWVQAPA*PHPRLE
Trigger: CTCAAGTCGGGGATGAGGGCAAGCTGGTGCCTGTAC...CCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGGTACAGGCACCAGCTTaGCCTCATCCCCGACTTGAG +
Preference number: 4 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMVQAPA*PHPRLE
Trigger: CTCAAGTCGGGGATGAGGGCAAGCTGGTGCCTGTAC...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp CACAGCCTGCCTCACAGCAAGGAAGGGTTCATTATGCGTCTTCCTCCTGAGCAGGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATC +
Preference number: 4 (lower is better)
Translates to: HSLPHSKEGFIMRLPPEQGAECT*ITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC...CTGCTCAGGAGGAAGACGCATAATGAACCCTTCCTTGCTGTGAGGCAGGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp CTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGATGACTGGGGCTGAGTaGACGTGCATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: LEEHSWSRMALMTGAECTMTGAE*TCITLT
Trigger: GGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCAT...CGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACCCAGCACTCTGGACTTaGGGGAAACTCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHPALWT*GKLFLW
Trigger: CCAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGG...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGATTCTCTGGACCAGTTTaGGCCACCTGCTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRFSGPV*ATCCSA
Trigger: GGCACTACAGCAGGTGGCCCAAACTGGTCCAGAGAA...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGTCAGGCAACCCAGGATaGCCAGGGTTCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRSGNPG*PGFGRP
Trigger: AGGCCTACCGAACCCTGGCCATCCTGGGTTGCCTGA...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTCAGGCAACCCAGGATaGCCAGGGTTCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTASGNPG*PGFGRP
Trigger: AGGCCTACCGAACCCTGGCCATCCTGGGTTGCCTGA...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTCACTTCAGGGGGTCCTaGGTAGGCTCTAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTAHFRGS*VGSKGL
Trigger: CAGGCCCTTAGAGCCTACCCAGGACCCCCTGAAGTG...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCACTTCAGGGGGTCCTaGGTAGGCTCTAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRHFRGS*VGSKGL
Trigger: CAGGCCCTTAGAGCCTACCCAGGACCCCCTGAAGTG...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CCA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACCTGTTTCTTGATCCTTaGCTGCCAGGGCCCTATGAC +
Preference number: 4 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHLFLDP*LPGPYD
Trigger: GTCATAGGGCCCTGGCAGCCAAGGATCAAGAAACAG...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 72 bp TGGCACAGGCACTGCAACAAGAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: WHRHCNKNSWTM*LQGLRKPRHRA
Trigger: AGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp TCCTCTAGCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTTGAGCATTTGGGTAGCAGTACGGGACTaGGTTTGGCTTGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: SSSPCAWICSSPMVLSIWVAVRD*VWLARM
Trigger: CATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTAC...CCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp AGAGATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCTTGATGACTGGGGCTaGGTGCACGTGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: RDDCFLACSGIWVHQLCLLDDWG*VHVHHL
Trigger: AAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAG...GAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGACCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRPAQWS*AFGWLQ
Trigger: TTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGG...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACAGCTCTTCCACAGTTTaGGCCACAGCCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDSSSTV*ATACLT
Trigger: TGTGAGGCAGGCTGTGGCTCAAACTGTGGAAGAGCT...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCCCGGAGCTGTTTCTTaGTCCTTGGCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGPGAVS*SLAARA
Trigger: GGCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGGG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGAGGCTTGCTCGGATGCTaGCTCCAGCACTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGGLLGC*LQHSGL
Trigger: AAGTCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCC...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAGGCTTGCTCGGATGCTaGCTCCAGCACTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQGLLGC*LQHSGL
Trigger: AAGTCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCC...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TTGATGACTGGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCTTTGGCTTGCTCGGATaGTGCCTCCAGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: LMTGAECTCITLTSILSAFGLLG*CLQHSG
Trigger: TCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAA...GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGAGCCCGGATCACATaGTTATTCAGGCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKRARIT*LFRQPR
Trigger: CCTGGGTTGCCTGAATAAGCATGTGATCCGGGCTCT...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGTACAGGCACCAGCTTaGCCTCATCCCCGACTTGAG +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRVQAPA*PHPRLE
Trigger: CTCAAGTCGGGGATGAGGGCAAGCTGGTGCCTGTAC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATC +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRGAECT*ITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGATGACTGGGGCTGAGTaGACGTGCATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMMTGAE*TCITLT
Trigger: GGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCAT...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp GGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCTTCATCCGCAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GAECTCITLTSILSAFIRRKGSL*VFLLSR
Trigger: CCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCT...GCGGATGAAGGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TTGATGACTGGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCACCCAAAGAGATGACTaGTTCCTGGCGTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LMTGAECTCITLTSILSATQRDD*FLACSG
Trigger: GCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGT...GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACCCAAAGAGATGACTaGTTCCTGGCGTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMTQRDD*FLACSG
Trigger: GCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGT...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACACCCAAAGAGATGACTaGTTCCTGGCGTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDTQRDD*FLACSG
Trigger: GCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGT...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGGAACACTTGTGGACTaGGGATCCCCAGGACACCCA +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRGTLVD*GSPGHP
Trigger: TGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CCA 90 bp CAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTCTCTGGACCAGTTTaGGCCACCTGCTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: QVEHLWTADPQDTQRDDCFSGPV*ATCCSA
Trigger: GGCACTACAGCAGGTGGCCCAAACTGGTCCAGAGAA...GCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGTCAGGCAACCCAGGATaGCCAGGGTTCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVSGNPG*PGFGRP
Trigger: AGGCCTACCGAACCCTGGCCATCCTGGGTTGCCTGA...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AGTCCTTGGCACAGGCACTGCAACAAGAACTCTTGGACCATGTTGCTGCAAGGCGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: SPWHRHCNKNSWTMLLQGEMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIREMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AGGACACTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGCAAGTGGAACACTTGTaGACTGCGGATCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RTLEEHSWSRMALMTGAEQVEHL*TADPQD
Trigger: GTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG...CTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACCAAGTGGAACACTTGTaGACTGCGGATCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDQVEHL*TADPQD
Trigger: GTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGCATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTTGGCACAGGCACTGCTGGCCTATGTTTTCGTaGTTTCGAGCAGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SILSAFIRWVLSPWHRHCWPMFS*FRAARW
Trigger: CCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA...GCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 72 bp AGGACACTGGAAGAACACAGCTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGCACGTGCATCACCTTG +
Preference number: 4 (lower is better)
Translates to: RTLEEHSWSRMA*MTGAECTCITL
Trigger: CAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGGGTACAGGAACATTaGCCTGTCCTCTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDWVQEH*PVLCGT
Trigger: CGTACCACAGAGGACAGGTCAATGTTCCTGTACCCA...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR TCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGTAGCAGTACGGGACTaGGTTTGGCTTGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRVAVRD*VWLARM
Trigger: CATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTAC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGGTAGCAGTACGGGACTaGGTTTGGCTTGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRVAVRD*VWLARM
Trigger: CATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTAC...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACAGATCTCAGGTTTCTTaGAGTAGCAGTACGGGACTG +
Preference number: 4 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHRSQVS*SSSTGL
Trigger: CAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCT...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTCCCTTTCCTCTCGCTaGTCATACAGGTCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTASLSSR*SYRSCQ
Trigger: CTGGCACGACCTGTATGATCAGCGAGAGGAAAGGGA...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAATCCCTTTCCTCTCGCTaGTCATACAGGTCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQSLSSR*SYRSCQ
Trigger: CTGGCACGACCTGTATGATCAGCGAGAGGAAAGGGA...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp TTGATGACTGGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCCCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LMTGAECTCITLTSILSAPAQWS*AFGWLQ
Trigger: TTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGG...GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGCCCGGAGCTGTTTCTTaGTCCTTGGCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKPGAVS*SLAARA
Trigger: GGCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGGG...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp CGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTTGCCCTCATCCCCGACTTaGGTCCTCTTGTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RGFEQHGGKAGVFFWPTLPSSPT*VLLSSF
Trigger: AAAGCTGGACAAGAGGACTCAAGTCGGGGATGAGGG...CAAAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGGCATCCCAGAGCCTGTaGTGCATAGAACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMASQSL*CIELLI
Trigger: GATGAGCAGTTCTATGCAGCACAGGCTCTGGGATGC...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGCCAGTTTGGGCCACCTaGTGTAGTGCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRPVWAT*CSASMT
Trigger: TGTCATGGAGGCACTACAGCAGGTGGCCCAAACTGG...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTGTACAGGCACCAGCTTaGCCTCATCCCCGACTTGAG +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDAVQAPA*PHPRLE
Trigger: CTCAAGTCGGGGATGAGGGCAAGCTGGTGCCTGTAC...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: KSRSKWNTCGLRIPRTPKGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...TTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp CAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: QVEHLWTADPQDTQRDDCLGPCC*KASGNP
Trigger: TGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAG...GCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGGACACTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGCCTTGGCACAGGCACTaGAACAAGAACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: RTLEEHSWSRMALMTGAEPWHRH*NKNSWT
Trigger: GGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGG...CTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGAGATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCCTTGGCACAGGCACTaGAACAAGAACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: RDDCFLACSGIWVHQLCLPWHRH*NKNSWT
Trigger: GGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGG...GAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp GCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGCCTTGGCACAGGCACTaGAACAAGAACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: ASSKSRSKWNTCGLRIPRPWHRH*NKNSWT
Trigger: GGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGG...CCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATC +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSGAECT*ITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGATGACTGGGGCTGAGTaGACGTGCATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRMTGAE*TCITLT
Trigger: GGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCAT...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGGAAGGGAGGCTGGTTaGTTTTCAGGTCCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRGREAG*FSGPER
Trigger: TCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRDCFLA*SGIWVH
Trigger: ATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGGAACCTTGTGGGCTCTaGCTTCACATTGGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKEPCGL*LHIGLR
Trigger: CCTAAGACCAATGTGAAGGCAGAGCCCACAAGGTTC...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp CACAGCCTGCCTCACAGCAAGGAAGGGTTCATTATGCGTCTTCCTCCTGAGCAGTTCTTGATCCTTGGCTaGCAGGGCCCTATGACCTGT +
Preference number: 4 (lower is better)
Translates to: HSLPHSKEGFIMRLPPEQFLILG*QGPMTC
Trigger: ACAGGTCATAGGGCCCTGGCAGCCAAGGATCAAGAA...CTGCTCAGGAGGAAGACGCATAATGAACCCTTCCTTGCTGTGAGGCAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCCTGCCTCCAGCACTCTaGACTTGGGGGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPLPPAL*TWGKLF
Trigger: GAAGAGTTTCCCCCAAGTCCAGAGTGCTGGAGGCAG...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGCTGCCTCCAGCACTCTaGACTTGGGGGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRLPPAL*TWGKLF
Trigger: GAAGAGTTTCCCCCAAGTCCAGAGTGCTGGAGGCAG...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAACTGCCTCCAGCACTCTaGACTTGGGGGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQLPPAL*TWGKLF
Trigger: GAAGAGTTTCCCCCAAGTCCAGAGTGCTGGAGGCAG...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCTTCATCCGCACTGCTCATCCTCTCTaGGAGATTCCAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GAECTCITLTSILSAFIRTAHPL*EIPGFL
Trigger: CAAAAAGCCTGGAATCTCCCAGAGAGGATGAGCAGT...GCGGATGAAGGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGTTCTCTGGACCAGTTTaGGCCACCTGCTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRFSGPV*ATCCSA
Trigger: GGCACTACAGCAGGTGGCCCAAACTGGTCCAGAGAA...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGGTACTTCACTTTCTCTaGACCAGTTTGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKVLHFL*TSLGHL
Trigger: CAGGTGGCCCAAACTGGTCCAGAGAAAGTGAAGTAC...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTCAGGCAACCCAGGATaGCCAGGGTTCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSGNPG*PGFGRP
Trigger: AGGCCTACCGAACCCTGGCCATCCTGGGTTGCCTGA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGTCAGGCAACCCAGGATaGCCAGGGTTCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVSGNPG*PGFGRP
Trigger: AGGCCTACCGAACCCTGGCCATCCTGGGTTGCCTGA...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGTGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAG +
Preference number: 4 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMWVLSP*HRHCNK
Trigger: CTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCA...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGACTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRLEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGCTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKLEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTASSPCA*ICSSPM
Trigger: CATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGA...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGTCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRSSPCA*ICSSPM
Trigger: CATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGA...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSEMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACAAGTCCAGGAGCAAGTaGAACACTTGTGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDKSRSK*NTCGLR
Trigger: CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCACTTCAGGGGGTCCTaGGTAGGCTCTAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGHFRGS*VGSKGL
Trigger: CAGGCCCTTAGAGCCTACCCAGGACCCCCTGAAGTG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR CCA 90 bp TTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATATCTTCTTCTCCTGGTaGGGCCAGAGGGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: FLACSGIWVHQLCLHQVHIFFSW*GQREPA
Trigger: TGCAGGTTCCCTCTGGCCCCACCAGGAGAAGAAGAT...ATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGTGGGTACAGGAACATTaGCCTGTCCTCTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRWVQEH*PVLCGT
Trigger: CGTACCACAGAGGACAGGTCAATGTTCCTGTACCCA...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGGAGCCATGGCTTTTCTaGGTTCTAGACCCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRREPWLF*VLDPCL
Trigger: CAGGCAAGGGTCTAGAACTCAGAAAAGCCATGGCTC...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAGTAGCAGTACGGGACTaGGTTTGGCTTGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRVAVRD*VWLARM
Trigger: CATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTAC...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATCTCAGGTTTCTTaGAGTAGCAGTACGGGACTG +
Preference number: 4 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKRSQVS*SSSTGL
Trigger: CAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCT...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAACCCTCATCCCCGACTTaGGTCCTCTTGTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQPSSPT*VLLSLE
Trigger: CTCTAAAGACAAGAGGACTCAAGTCGGGGATGAGGG...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCCCCTCATCCCCGACTTaGGTCCTCTTGTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPPSSPT*VLLSLE
Trigger: CTCTAAAGACAAGAGGACTCAAGTCGGGGATGAGGG...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR TCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTCTTGATGACTGGGGCTaGGTGCACGTGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDALDDWG*VHVHHL
Trigger: AAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAG...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGCTTGATGACTGGGGCTaGGTGCACGTGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVLDDWG*VHVHHL
Trigger: AAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAG...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGCCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRPAQWS*AFGWLQ
Trigger: TTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGG...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAGCTCTTCCACAGTTTaGGCCACAGCCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDASSSTV*ATACLT
Trigger: TGTGAGGCAGGCTGTGGCTCAAACTGTGGAAGAGCT...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGCTCTTCCACAGTTTaGGCCACAGCCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRSSSTV*ATACLT
Trigger: TGTGAGGCAGGCTGTGGCTCAAACTGTGGAAGAGCT...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGCTGCCAGGGCCCTATaGCCTGTGGCCTATGTTTTC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGAARAL*PVAYVF
Trigger: GAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp TCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGCCCGGAGCTGTTTCTTaGTCCTTGGCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SCRLFFTAWWFSASSKSRPGAVS*SLAARA
Trigger: GGCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGGG...CCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGCTTGCTCGGATGCTaGCTCCAGCACTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGLLGC*LQHSGL
Trigger: AAGTCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTTTTGGCTTGCTCGGATaGTGCCTCCAGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDAFGLLG*CLQHSG
Trigger: TCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAA...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCGCATCCCAGAGCCTGTaGTGCATAGAACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPASQSL*CIELLI
Trigger: GATGAGCAGTTCTATGCAGCACAGGCTCTGGGATGC...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGCATCCCAGAGCCTGTaGTGCATAGAACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRASQSL*CIELLI
Trigger: GATGAGCAGTTCTATGCAGCACAGGCTCTGGGATGC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TGGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTCCAGTTTGGGCCACCTaGTGTAGTGCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: WPMFSWFRAARWESRRFLPVWAT*CSASMT
Trigger: TGTCATGGAGGCACTACAGCAGGTGGCCCAAACTGG...AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTCCAGTTTGGGCCACCTaGTGTAGTGCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLPVWAT*CSASMT
Trigger: TGTCATGGAGGCACTACAGCAGGTGGCCCAAACTGG...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGAGCCCGGATCACATaGTTATTCAGGCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQRARIT*LFRQPR
Trigger: CCTGGGTTGCCTGAATAAGCATGTGATCCGGGCTCT...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGAAGAGCCCGGATCACATaGTTATTCAGGCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGRARIT*LFRQPR
Trigger: CCTGGGTTGCCTGAATAAGCATGTGATCCGGGCTCT...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGTACAGGCACCAGCTTaGCCTCATCCCCGACTTGAG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGVQAPA*PHPRLE
Trigger: CTCAAGTCGGGGATGAGGGCAAGCTGGTGCCTGTAC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp TTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: FLACSGIWVHQLCLHQVHGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...ATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 4 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRLGPCC*KASGNP
Trigger: TGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAG...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp CAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCACTCTTGGACCATGTTaGTGCAAGGCCTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: QVEHLWTADPQDTQRDDCTLGPC*CKASGN
Trigger: GTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGT...GCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAACCTTGGCACAGGCACTaGAACAAGAACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQPWHRH*NKNSWT
Trigger: GGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGG...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACCTTGGCACAGGCACTaGAACAAGAACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGPWHRH*NKNSWT
Trigger: GGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGG...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGAECT*ITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATC +
Preference number: 4 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRGAECT*ITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TTGATGACTGGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LMTGAECTCITLTSILSARKGSL*VFLLSR
Trigger: CCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCT...GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTGGAAGGGAGGCTGGTTaGTTTTCAGGTCCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDAGREAG*FSGPER
Trigger: TCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDADCFLA*SGIWVH
Trigger: ATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTC...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTACCCAAAGAGATGACTaGTTCCTGGCGTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDATQRDD*FLACSG
Trigger: GCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGT...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGGGAACACTTGTGGACTaGGGATCCCCAGGACACCCA +
Preference number: 4 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRGTLVD*GSPGHP
Trigger: TGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCC...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGAACACTTGTGGACTaGGGATCCCCAGGACACCCA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGTLVD*GSPGHP
Trigger: TGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTTCTTGATCCTTGGCTaGCAGGGCCCTATGACCTGT +
Preference number: 4 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTAFLILG*QGPMTC
Trigger: ACAGGTCATAGGGCCCTGGCAGCCAAGGATCAAGAA...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGTACAGGGGAGGTGTCTaGACTTCTGGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRYRGGV*TSGGRS
Trigger: GCTTCTACCTCCAGAAGTCCAGACACCTCCCCTGTA...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCTACAGGGGAGGTGTCTaGACTTCTGGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPYRGGV*TSGGRS
Trigger: GCTTCTACCTCCAGAAGTCCAGACACCTCCCCTGTA...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAATACAGGGGAGGTGTCTaGACTTCTGGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQYRGGV*TSGGRS
Trigger: GCTTCTACCTCCAGAAGTCCAGACACCTCCCCTGTA...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGTTGACCTGTCCTCTGTaGTACGAGAGGTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRLTCPL*YERYRG
Trigger: TCCCCTGTACCTCTCGTACCACAGAGGACAGGTCAA...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAATCAGTCCCCTGCTCTTaGCTCCATTTCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQSVPCS*LHFCPS
Trigger: GGATGGACAGAAATGGAGCCAAGAGCAGGGGACTGA...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCTCAGTCCCCTGCTCTTaGCTCCATTTCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPSVPCS*LHFCPS
Trigger: GGATGGACAGAAATGGAGCCAAGAGCAGGGGACTGA...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CCA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACCAGCACTCTGGACTTaGGGGAAACTCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGPALWT*GKLFLW
Trigger: CCAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGG...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAACTGCTCATCCTCTCTaGGAGATTCCAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRTAHPL*EIPGFL
Trigger: CAAAAAGCCTGGAATCTCCCAGAGAGGATGAGCAGT...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TGGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTCTCTGGACCAGTTTaGGCCACCTGCTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: WPMFSWFRAARWESRRFLFSGPV*ATCCSA
Trigger: GGCACTACAGCAGGTGGCCCAAACTGGTCCAGAGAA...AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AAGAACTCTTGGACCATGTTGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGCTGTACTTCACTTTCTCTaGACCAGTTTGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: KNSWTMLLQGLRKPRHRAVLHFL*TSLGHL
Trigger: CAGGTGGCCCAAACTGGTCCAGAGAAAGTGAAGTAC...AGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCTGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAG +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPWVLSP*HRHCNK
Trigger: CTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCA...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAATGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAG +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQWVLSP*HRHCNK
Trigger: CTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCA...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGCTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMLEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp CAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCGGTCCTCAAGGACACTaGAAGAACACAGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: QVEHLWTADPQDTQRDDCGPQGH*KNTAGL
Trigger: TAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACC...GCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACGGTCCTCAAGGACACTaGAAGAACACAGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDGPQGH*KNTAGL
Trigger: TAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACC...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGEMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTCAAGTGGAACACTTGTaGACTGCGGATCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDAQVEHL*TADPQD
Trigger: GTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGCCATCTTCTTCTCCTaGTGGGGCCAGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGAIFFS*WGQREP
Trigger: AGGTTCCCTCTGGCCCCACCAGGAGAAGAAGATGGC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp GCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGCTTTCTGGAACCTTGTaGGCTCTGCCTTCACATTGG +
Preference number: 4 (lower is better)
Translates to: ASSKSRSKWNTCGLRIPRLSGTL*ALPSHW
Trigger: CCAATGTGAAGGCAGAGCCCACAAGGTTCCAGAAAG...CCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AGAGATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCTTTCTGGAACCTTGTaGGCTCTGCCTTCACATTGG +
Preference number: 4 (lower is better)
Translates to: RDDCFLACSGIWVHQLCLLSGTL*ALPSHW
Trigger: CCAATGTGAAGGCAGAGCCCACAAGGTTCCAGAAAG...GAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 72 bp CATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAAGAACTCTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: HPKCLHPLGLES*AQALQQELLDH
Trigger: ATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 72 bp TTGACCAGCATCCTAAGTGCCTTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCACTGCAACAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: LTSILSAFIRWV*SPWHRHCNKNS
Trigger: AGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATGCTGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGATGGGTACAGGAACATTaGCCTGTCCTCTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRWVQEH*PVLCGT
Trigger: CGTACCACAGAGGACAGGTCAATGTTCCTGTACCCA...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGTAGCAGTACGGGACTaGGTTTGGCTTGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGVAVRD*VWLARM
Trigger: CATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTAC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTCCCTTTCCTCTCGCTaGTCATACAGGTCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSLSSR*SYRSCQ
Trigger: CTGGCACGACCTGTATGATCAGCGAGAGGAAAGGGA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGTCCCTTTCCTCTCGCTaGTCATACAGGTCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVSLSSR*SYRSCQ
Trigger: CTGGCACGACCTGTATGATCAGCGAGAGGAAAGGGA...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTATCCCTTTCCTCTCGCTaGTCATACAGGTCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLSLSSR*SYRSCQ
Trigger: CTGGCACGACCTGTATGATCAGCGAGAGGAAAGGGA...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGACCCTCATCCCCGACTTaGGTCCTCTTGTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRPSSPT*VLLSLE
Trigger: CTCTAAAGACAAGAGGACTCAAGTCGGGGATGAGGG...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp TTGATGACTGGGGCTGAGTGCACGTGCATCACCTTGACCAGCATCCTAAGTGCCCACTGGACGACTTCTTaGTCAGTGTCTGTAGTACAG +
Preference number: 4 (lower is better)
Translates to: LMTGAECTCITLTSILSAHWTTS*SVSVVQ
Trigger: CTGTACTACAGACACTGATCAAGAAGTCGTCCAGTG...GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp AGAGATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCACTGGACGACTTCTTaGTCAGTGTCTGTAGTACAG +
Preference number: 4 (lower is better)
Translates to: RDDCFLACSGIWVHQLCLHWTTS*SVSVVQ
Trigger: CTGTACTACAGACACTGATCAAGAAGTCGTCCAGTG...GAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTTGATGACTGGGGCTaGGTGCACGTGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLDDWG*VHVHHL
Trigger: AAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGCTTGATGACTGGGGCTaGGTGCACGTGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVLDDWG*VHVHHL
Trigger: AAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAG...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAGCTCTTCCACAGTTTaGGCCACAGCCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSSSTV*ATACLT
Trigger: TGTGAGGCAGGCTGTGGCTCAAACTGTGGAAGAGCT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp AGAGATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCGAGCCATGGCTTTTCTaGGTTCTTTGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RDDCFLACSGIWVHQLCLEPWLF*VLWSCL
Trigger: CAGACAAGACCAAAGAACTCAGAAAAGCCATGGCTC...GAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGCTGCCAGGGCCCTATaGCCTGTGGCCTATGTTTTC +
Preference number: 4 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASAARAL*PVAYVF
Trigger: GAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGC...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTTGGCTTGCTCGGATaGTGCCTCCAGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFGLLG*CLQHSG
Trigger: TCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGTTTGGCTTGCTCGGATaGTGCCTCCAGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVFGLLG*CLQHSG
Trigger: TCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAA...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTATTTGGCTTGCTCGGATaGTGCCTCCAGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLFGLLG*CLQHSG
Trigger: TCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAA...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGCATCCCAGAGCCTGTaGTGCATAGAACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSASQSL*CIELLI
Trigger: GATGAGCAGTTCTATGCAGCACAGGCTCTGGGATGC...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGCATCCCAGAGCCTGTaGTGCATAGAACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVASQSL*CIELLI
Trigger: GATGAGCAGTTCTATGCAGCACAGGCTCTGGGATGC...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCCAGTTTGGGCCACCTaGTGTAGTGCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGPVWAT*CSASMT
Trigger: TGTCATGGAGGCACTACAGCAGGTGGCCCAAACTGG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTACCAGTTTGGGCCACCTaGTGTAGTGCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLPVWAT*CSASMT
Trigger: TGTCATGGAGGCACTACAGCAGGTGGCCCAAACTGG...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGAGCCCGGATCACATaGTTATTCAGGCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRRARIT*LFRQPR
Trigger: CCTGGGTTGCCTGAATAAGCATGTGATCCGGGCTCT...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGTACAGGCACCAGCTTaGCCTCATCCCCGACTTGAG +
Preference number: 4 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCVQAPA*PHPRLE
Trigger: CTCAAGTCGGGGATGAGGGCAAGCTGGTGCCTGTAC...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 4 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSLGPCC*KASGNP
Trigger: TGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAG...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCACTCTTGGACCATGTTaGTGCAAGGCCTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPTLGPC*CKASGN
Trigger: GTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGT...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGACTCTTGGACCATGTTaGTGCAAGGCCTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRTLGPC*CKASGN
Trigger: GTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGT...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAACTCTTGGACCATGTTaGTGCAAGGCCTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQTLGPC*CKASGN
Trigger: GTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGT...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGATGACTGGGGCTGAGTaGACGTGCATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGMTGAE*TCITLT
Trigger: GGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCAT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQRKGSL*VFLLSR
Trigger: CCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCT...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGGGAAGGGAGGCTGGTTaGTTTTCAGGTCCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRGREAG*FSGPER
Trigger: TCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGDCFLA*SGIWVH
Trigger: ATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGACCCAAAGAGATGACTaGTTCCTGGCGTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGTQRDD*FLACSG
Trigger: GCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAACCCAAAGAGATGACTaGTTCCTGGCGTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLTQRDD*FLACSG
Trigger: GCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGT...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGTCCTTGGCACAGGCACTGCAACAAGAACTCTTGGACCATGTTGCTGCAAGGCAGTTCCCTTAATCTTTaGCACTTCAGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPWHRHCNKNSWTMLLQGSSLNL*HFRGSW
Trigger: CCAGGACCCCCTGAAGTGGCAAAGATTAAGGGAACT...GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGAGTTCCCTTAATCTTTaGCACTTCAGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRSSLNL*HFRGSW
Trigger: CCAGGACCCCCTGAAGTGGCAAAGATTAAGGGAACT...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGATCAGTCCCCTGCTCTTaGCTCCATTTCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRSVPCS*LHFCPS
Trigger: GGATGGACAGAAATGGAGCCAAGAGCAGGGGACTGA...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AGGACACTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGGGGAAACTCTTCCTTTaGCATCTGGTAGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: RTLEEHSWSRMALMTGAEGKLFL*HLVAGQ
Trigger: TTGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCC...CTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTCCAGCACTCTGGACTTaGGGGAAACTCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSPALWT*GKLFLW
Trigger: CCAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGG...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTCCAGCACTCTGGACTTaGGGGAAACTCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDAPALWT*GKLFLW
Trigger: CCAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGG...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTGCCTCCAGCACTCTaGACTTGGGGGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLPPAL*TWGKLF
Trigger: GAAGAGTTTCCCCCAAGTCCAGAGTGCTGGAGGCAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGCTGCCTCCAGCACTCTaGACTTGGGGGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRLPPAL*TWGKLF
Trigger: GAAGAGTTTCCCCCAAGTCCAGAGTGCTGGAGGCAG...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTCTCTGGACCAGTTTaGGCCACCTGCTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFSGPV*ATCCSA
Trigger: GGCACTACAGCAGGTGGCCCAAACTGGTCCAGAGAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGGTACTTCACTTTCTCTaGACCAGTTTGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRVLHFL*TSLGHL
Trigger: CAGGTGGCCCAAACTGGTCCAGAGAAAGTGAAGTAC...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp CAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: QVEHLWTADPQDTQRDDCCNKNS*TMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCA...GCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTTGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAG +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDAWVLSP*HRHCNK
Trigger: CTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCA...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGLEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSSPCA*ICSSPM
Trigger: CATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAAGTGGAAGGGAGGCTaGTTGCTTTTCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQKWKGG*LLFRSR
Trigger: TCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTT...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTGAGATGACTGCTTCCTaGCGTGCAGTGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIEMTAS*RAVASG
Trigger: CCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTC...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCAAGTGGAACACTTGTaGACTGCGGATCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGQVEHL*TADPQD
Trigger: GTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGAAGTCCAGGAGCAAGTaGAACACTTGTGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVKSRSK*NTCGLR
Trigger: CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGATCTTCTTCTCCTGGTaGGGCCAGAGGGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGIFFSW*GQREPA
Trigger: TGCAGGTTCCCTCTGGCCCCACCAGGAGAAGAAGAT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCGCCATCTTCTTCTCCTaGTGGGGCCAGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: CRLFFTAWWFSASSKSRSAIFFS*WGQREP
Trigger: AGGTTCCCTCTGGCCCCACCAGGAGAAGAAGATGGC...GCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTCTGTTTCTTGATCCTTaGCTGCCAGGGCCCTATGAC +
Preference number: 4 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLLFLDP*LPGPYD
Trigger: GTCATAGGGCCCTGGCAGCCAAGGATCAAGAAACAG...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGAGACCTGTCCTCTGTaGTACGAGAGGTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGETCPL*YERYRG
Trigger: TCCCCTGTACCTCTCGTACCACAGAGGACAGGTCTC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGAAGATCTCAGGTTTCTTaGAGTAGCAGTACGGGACTG +
Preference number: 4 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGRSQVS*SSSTGL
Trigger: CAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCT...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp TCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTTCCCTTTCCTCTCGCTaGTCATACAGGTCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SQPGGFLHLVSPGASGTLSLSSR*SYRSCQ
Trigger: CTGGCACGACCTGTATGATCAGCGAGAGGAAAGGGA...AAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCCCTCATCCCCGACTTaGGTCCTCTTGTCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGPSSPT*VLLSLE
Trigger: CTCTAAAGACAAGAGGACTCAAGTCGGGGATGAGGG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCACTGGACGACTTCTTaGTCAGTGTCTGTAGTACAG +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRHWTTS*SVSVVQ
Trigger: CTGTACTACAGACACTGATCAAGAAGTCGTCCAGTG...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAACACTGGACGACTTCTTaGTCAGTGTCTGTAGTACAG +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQHWTTS*SVSVVQ
Trigger: CTGTACTACAGACACTGATCAAGAAGTCGTCCAGTG...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGPAQWS*AFGWLQ
Trigger: TTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGCCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRPAQWS*AFGWLQ
Trigger: TTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGG...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACTTTGATGTACCTCTTTaGTGTACCTACAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHFDVPL*CTYSHL
Trigger: GAGATGACTGTAGGTACATCAAAGAGGTACATCAAA...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAATTCCAGGCTTTTTGTaGGTTCCCTTAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRIPGFL*VPLIFA
Trigger: GGCAAAGATTAAGGGAACTCACAAAAAGCCTGGAAT...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTTCTCATGGGAGCCTaGGAAGCATCTTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFLMGA*EASSGR
Trigger: CCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTCCCTCATCCCCGACTTaGGTCCTCTTGTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASPSSPT*VLLSSF
Trigger: AAAGCTGGACAAGAGGACTCAAGTCGGGGATGAGGG...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGCATCCCAGAGCCTGTaGTGCATAGAACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGASQSL*CIELLI
Trigger: GATGAGCAGTTCTATGCAGCACAGGCTCTGGGATGC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGCCAGTTTGGGCCACCTaGTGTAGTGCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKPVWAT*CSASMT
Trigger: TGTCATGGAGGCACTACAGCAGGTGGCCCAAACTGG...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAGAGCCCGGATCACATaGTTATTCAGGCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGRARIT*LFRQPR
Trigger: CCTGGGTTGCCTGAATAAGCATGTGATCCGGGCTCT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLGPCC*KASGNP
Trigger: TGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTACTCTTGGACCATGTTaGTGCAAGGCCTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSTLGPC*CKASGN
Trigger: GTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGT...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCCTTGGCACAGGCACTaGAACAAGAACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGPWHRH*NKNSWT
Trigger: GGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp TGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCATGACTGGGGCTGAGTaGACGTGCATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: CRLFFTAWWFSASSKSRSMTGAE*TCITLT
Trigger: GGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCAT...GCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTATGACTGGGGCTGAGTaGACGTGCATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIMTGAE*TCITLT
Trigger: GGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCAT...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTGGAAGGGAGGCTGGTTaGTTTTCAGGTCCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIGREAG*FSGPER
Trigger: TCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASDCFLA*SGIWVH
Trigger: ATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTC...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp CTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGGAACACTTGTGGACTaGGGATCCCCAGGACACCCA +
Preference number: 4 (lower is better)
Translates to: LVDSSSQPGGFLHLVSPGGTLVD*GSPGHP
Trigger: TGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCC...TCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTCTTGATCCTTGGCTaGCAGGGCCCTATGACCTGT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFLILG*QGPMTC
Trigger: ACAGGTCATAGGGCCCTGGCAGCCAAGGATCAAGAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTACAGGGGAGGTGTCTaGACTTCTGGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGYRGGV*TSGGRS
Trigger: GCTTCTACCTCCAGAAGTCCAGACACCTCCCCTGTA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR CCA 90 bp TTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATGGGAAACTCTTCCTTTaGCATCTGGTAGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: FLACSGIWVHQLCLHQVHGKLFL*HLVAGQ
Trigger: TTGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCC...ATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCCAGCACTCTGGACTTaGGGGAAACTCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGPALWT*GKLFLW
Trigger: CCAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTCTGCCTCCAGCACTCTaGACTTGGGGGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLILPPAL*TWGKLF
Trigger: GAAGAGTTTCCCCCAAGTCCAGAGTGCTGGAGGCAG...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGACTGCTCATCCTCTCTaGGAGATTCCAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TASWRAVASGFISCLCRRTAHPL*EIPGFL
Trigger: CAAAAAGCCTGGAATCTCCCAGAGAGGATGAGCAGT...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTACNKNS*TMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCA...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGWVLSP*HRHCNK
Trigger: CTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAGGTCCTCAAGGACACTaGAAGAACACAGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRGPQGH*KNTAGL
Trigger: TAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACC...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGTCCTCAAGGACACTaGAAGAACACAGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSGPQGH*KNTAGL
Trigger: TAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACC...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTGGTCCTCAAGGACACTaGAAGAACACAGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GREAGCFSGPERIRQSDAGPQGH*KNTAGL
Trigger: TAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACC...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLISSPCA*ICSSPM
Trigger: CATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGA...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKSSPCA*ICSSPM
Trigger: CATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGA...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAAGTGGAAGGGAGGCTaGTTGCTTTTCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRKWKGG*LLFRSR
Trigger: TCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTT...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAAGTCCAGGAGCAAGTaGAACACTTGTGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGKSRSK*NTCGLR
Trigger: CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGAAGTCCAGGAGCAAGTaGAACACTTGTGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRKSRSK*NTCGLR
Trigger: CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCACACTTCAGGGGGTCCTaGGTAGGCTCTAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISHFRGS*VGSKGL
Trigger: CAGGCCCTTAGAGCCTACCCAGGACCCCCTGAAGTG...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTGGCCTATGTTTTCGTaGTTTCGAGCAGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGWPMFS*FRAARW
Trigger: CCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTGTTTCTTGATCCTTaGCTGCCAGGGCCCTATGAC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLFLDP*LPGPYD
Trigger: GTCATAGGGCCCTGGCAGCCAAGGATCAAGAAACAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTAGATCTCAGGTTTCTTaGAGTAGCAGTACGGGACTG +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSRSQVS*SSSTGL
Trigger: CAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCT...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp TGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCCCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: CRLFFTAWWFSASSKSRSPAQWS*AFGWLQ
Trigger: TTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGG...GCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp CTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAAGCTCTTCCACAGTTTaGGCCACAGCCTGCCTCACA +
Preference number: 4 (lower is better)
Translates to: LVDSSSQPGGFLHLVSPGSSSTV*ATACLT
Trigger: TGTGAGGCAGGCTGTGGCTCAAACTGTGGAAGAGCT...TCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp AAGAACTCTTGGACCATGTTGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGCTATTCCAGGCTTTTTGTaGGTTCCCTTAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KNSWTMLLQGLRKPRHRAIPGFL*VPLIFA
Trigger: GGCAAAGATTAAGGGAACTCACAAAAAGCCTGGAAT...AGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTGAGCCATGGCTTTTCTaGGTTCTTTGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLEPWLF*VLWSCL
Trigger: CAGACAAGACCAAAGAACTCAGAAAAGCCATGGCTC...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACGCAAGTCGAAAGTCTTaGATAGTTAACTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDASRKS*IVNSSG
Trigger: CCCAGAAGAGTTAACTATTCAAGACTTTCGACTTGC...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGAGAGCCCGGATCACATaGTTATTCAGGCAACCCAGG +
Preference number: 4 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKRARIT*LFRQPR
Trigger: CCTGGGTTGCCTGAATAAGCATGTGATCCGGGCTCT...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKLGPCC*KASGNP
Trigger: TGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAG...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTCTTGGACCATGTTGCTaGAAGGCCTCAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASLGPCC*KASGNP
Trigger: TGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAG...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGACTCTTGGACCATGTTaGTGCAAGGCCTCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGTLGPC*CKASGN
Trigger: GTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCAGGGGCTGAGTGCACGTaGATCACCTTGACCAGCATC +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISGAECT*ITLTSI
Trigger: GATGCTGGTCAAGGTGATGCACGTGCACTCAGCCCC...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp AGTAGGCCCAAAGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTATGACTGGGGCTGAGTaGACGTGCATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: SRPKELTYLAISARTRSCMTGAE*TCITLT
Trigger: GGTCAAGGTGATGCACGTGCACTCAGCCCCAGTCAT...ACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCTTTGGGCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGRKGSL*VFLLSR
Trigger: CCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAAGTTCCCTTAATCTTTaGCACTTCAGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLSSLNL*HFRGSW
Trigger: CCAGGACCCCCTGAAGTGGCAAAGATTAAGGGAACT...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAGTTCCCTTAATCTTTaGCACTTCAGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSSLNL*HFRGSW
Trigger: CCAGGACCCCCTGAAGTGGCAAAGATTAAGGGAACT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR GCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCTGGGTTCATCAGTTGTaGCTCCACCAAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPWVHQL*LHQVHH
Trigger: ATGATGAACTTGGTGGAGGCACAACTGATGAACCCA...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGCACATTGGTCTTAGGTaGCTCATATACAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMHIGLR*LIYREN
Trigger: GTTCTCTCTGTATATGAGGCACCTAAGACCAATGTG...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGAACCTTGTGGGCTCTaGCTTCACATTGGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGEPCGL*LHIGLR
Trigger: CCTAAGACCAATGTGAAGGCAGAGCCCACAAGGTTC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp AAGAACTCTTGGACCATGTTGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGCTCAAGGGGTTCAGCTTTaGAAGTCGAAAGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KNSWTMLLQGLRKPRHRAQGVQL*KSKVLN
Trigger: ATTCAAGACTTTCGACTTGCAAAGCTGAACCCCTTG...AGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAACAAGGGGTTCAGCTTTaGAAGTCGAAAGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KSRSKWNTCGLRIPRTPKQGVQL*KSKVLN
Trigger: ATTCAAGACTTTCGACTTGCAAAGCTGAACCCCTTG...TTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTTGACCTGTCCTCTGTaGTACGAGAGGTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLILTCPL*YERYRG
Trigger: TCCCCTGTACCTCTCGTACCACAGAGGACAGGTCAA...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTTTGACCTGTCCTCTGTaGTACGAGAGGTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCLTCPL*YERYRG
Trigger: TCCCCTGTACCTCTCGTACCACAGAGGACAGGTCAA...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAACCTTTGGTCTTGTCTaGATATTCCAGCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQTFGLV*IFQPWV
Trigger: TACCCATGGCTGGAATATCCAGACAAGACCAAAGGT...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAGGGAAACTCTTCCTTTaGCATCTGGTAGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRGKLFL*HLVAGQ
Trigger: TTGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCC...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGGAAACTCTTCCTTTaGCATCTGGTAGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSGKLFL*HLVAGQ
Trigger: TTGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCC...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGGGAAACTCTTCCTTTaGCATCTGGTAGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVGKLFL*HLVAGQ
Trigger: TTGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCC...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTCCAGCACTCTGGACTTaGGGGAAACTCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCPALWT*GKLFLW
Trigger: CCAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGG...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGCCAGCACTCTGGACTTaGGGGAAACTCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKPALWT*GKLFLW
Trigger: CCAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGG...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGACTGCTCATCCTCTCTaGGAGATTCCAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVTAHPL*EIPGFL
Trigger: CAAAAAGCCTGGAATCTCCCAGAGAGGATGAGCAGT...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGTACTTCACTTTCTCTaGACCAGTTTGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGVLHFL*TSLGHL
Trigger: CAGGTGGCCCAAACTGGTCCAGAGAAAGTGAAGTAC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAGTACTTCACTTTCTCTaGACCAGTTTGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLVLHFL*TSLGHL
Trigger: CAGGTGGCCCAAACTGGTCCAGAGAAAGTGAAGTAC...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGGGTCCTCAAGGACACTaGAAGAACACAGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRGPQGH*KNTAGL
Trigger: TAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACC...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGTCCTCAAGGACACTaGAAGAACACAGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGPQGH*KNTAGL
Trigger: TAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp CTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGATCTAGCCCCTGTGCCTaGATCTGTTCCAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: LVDSSSQPGGFLHLVSPGSSPCA*ICSSPM
Trigger: CATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGA...TCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACTCTTCTTCACAGCCTaGTGGTTTTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGLFFTA*WFSASS
Trigger: ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAG...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGCATCCTAAGTGCCTTCATCCGCTGGGTCTTGAGTCCTTGGCACAGGCACTGCTTGCTCATTGGGAGATaGAACATTTTGATGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SILSAFIRWVLSPWHRHCLLIGR*NILMWV
Trigger: AACCCACATCAAAATGTTCCATCTCCCAATGAGCAA...GCAGTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAAGGCACTTAGGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AGAGATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCACAGGAACATTGACCTaGAGACATCAGAGATATCAG +
Preference number: 4 (lower is better)
Translates to: RDDCFLACSGIWVHQLCLTGTLT*RHQRYQ
Trigger: CTGATATCTCTGATGTCTCCAGGTCAATGTTCCTGT...GAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTTTCTGGAACCTTGTaGGCTCTGCCTTCACATTGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLSGTL*ALPSHW
Trigger: CCAATGTGAAGGCAGAGCCCACAAGGTTCCAGAAAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTTCGAGCAGCACGGTaGGAAAGCAGGCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFRAAR*ESRRFL
Trigger: AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGGCCCTATGACCTGTaGCCTATGTTTTCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGPYDL*PMFSWF
Trigger: AAACCACGAAAACATAGGCCACAGGTCATAGGGCCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
3UTR CAA 72 bp GGCTCTTTCTGGAACCTTGTGGGCTCTGCCTTCACATaGGTCTTAGGTGCCTCATATACAGAGAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: GSFWNLVGSAFT*VLGASYTERTL
Trigger: CAAGGTTCTCTCTGTATATGAGGCACCTAAGACCAATGTGAAGGCAGAGCCCACAAGGTTCCAGAAAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 72 bp AGGGAGTCGGGGAGTAGGCCCAAAGAATTGACTTATTaGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RESGSRPKELTY*AISARTRSCFL
Trigger: CAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCTTTGGGCCTACTCCCCGACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAGATCTCAGGTTTCTTaGAGTAGCAGTACGGGACTG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGRSQVS*SSSTGL
Trigger: CAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAAGATCTCAGGTTTCTTaGAGTAGCAGTACGGGACTG +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLRSQVS*SSSTGL
Trigger: CAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCT...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCATCCCTTTCCTCTCGCTaGTCATACAGGTCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISSLSSR*SYRSCQ
Trigger: CTGGCACGACCTGTATGATCAGCGAGAGGAAAGGGA...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCACTGGACGACTTCTTaGTCAGTGTCTGTAGTACAG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGHWTTS*SVSVVQ
Trigger: CTGTACTACAGACACTGATCAAGAAGTCGTCCAGTG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTACACTGGACGACTTCTTaGTCAGTGTCTGTAGTACAG +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLHWTTS*SVSVVQ
Trigger: CTGTACTACAGACACTGATCAAGAAGTCGTCCAGTG...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCACTTGATGACTGGGGCTaGGTGCACGTGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISLDDWG*VHVHHL
Trigger: AAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAG...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp CTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGATTTTGATGTGGGTTTaGTGTACCTCTTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: LEEHSWSRMALMTGAECTILMWV*CTSLMY
Trigger: GTACATCAAAGAGGTACATCAAACCCACATCAAAAT...CGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTGGAGATGGAACATTTTaGTGTGGGTTTGATGTACCT +
Preference number: 4 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTAGDGTF*CGFDVP
Trigger: AGGTACATCAAACCCACATCAAAATGTTCCATCTCC...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAGGAGATGGAACATTTTaGTGTGGGTTTGATGTACCT +
Preference number: 4 (lower is better)
Translates to: RGSGREAGCFSGPERIRQGDGTF*CGFDVP
Trigger: AGGTACATCAAACCCACATCAAAATGTTCCATCTCC...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGAGCCATGGCTTTTCTaGGTTCTTTGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGEPWLF*VLWSCL
Trigger: CAGACAAGACCAAAGAACTCAGAAAAGCCATGGCTC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCGCAAGTCGAAAGTCTTaGATAGTTAACTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPASRKS*IVNSSG
Trigger: CCCAGAAGAGTTAACTATTCAAGACTTTCGACTTGC...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGGCATCCCAGAGCCTGTaGTGCATAGAACTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SCRLFFTAWWFSASSKSRASQSL*CIELLI
Trigger: GATGAGCAGTTCTATGCAGCACAGGCTCTGGGATGC...CCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCACCAGTTTGGGCCACCTaGTGTAGTGCCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISPVWAT*CSASMT
Trigger: TGTCATGGAGGCACTACAGCAGGTGGCCCAAACTGG...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIRKGSL*VFLLSR
Trigger: CCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCT...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp GGGTGGCTTCAAAGCGGTCCTCAAGGACACTGGAAGAACACAGCTGGTCTAGGATTTGGTGATGGACTTTaGAATAAACAAGGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GWLQSGPQGHWKNTAGLGFGDGL*NKQGVQ
Trigger: CTGAACCCCTTGTTTATTGCAAAGTCCATCACCAAA...TCCTAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACCGCTTTGAAGCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp GCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATCATCGTAGGCTTCAACCCTCTTGTCCAGCTTTaGCCCCAATTAAAGACTGTC +
Preference number: 4 (lower is better)
Translates to: ASGFISCASTKFIIVGFNPLVQL*PQLKTV
Trigger: GACAGTCTTTAATTGGGGGCAAAGCTGGACAAGAGG...GTTGAAGCCTACGATGATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGGAAACTCTTCCTTTaGCATCTGGTAGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGKLFL*HLVAGQ
Trigger: TTGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGACTGCTCATCCTCTCTaGGAGATTCCAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGTAHPL*EIPGFL
Trigger: CAAAAAGCCTGGAATCTCCCAGAGAGGATGAGCAGT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCATTCTCTGGACCAGTTTaGGCCACCTGCTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISFSGPV*ATCCSA
Trigger: GGCACTACAGCAGGTGGCCCAAACTGGTCCAGAGAA...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp ATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTTCAGGCAACCCAGGATaGCCAGGGTTCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: MFLVDSSSQPGGFLHLVSSGNPG*PGFGRP
Trigger: AGGCCTACCGAACCCTGGCCATCCTGGGTTGCCTGA...ACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCAGGCAACCCAGGATaGCCAGGGTTCGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKSGNPG*PGFGRP
Trigger: AGGCCTACCGAACCCTGGCCATCCTGGGTTGCCTGA...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGCNKNS*TMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTCTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLILEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTAAGTGGAAGGGAGGCTaGTTGCTTTTCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIKWKGG*LLFRSR
Trigger: TCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTT...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTCTCTTCTTCACAGCCTaGTGGTTTTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLLFFTA*WFSASS
Trigger: ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAG...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGTTGCTCATTGGGAGATaGAACATTTTGATGTGGGTT +
Preference number: 4 (lower is better)
Translates to: ASSKSRSKWNTCGLRIPRLLIGR*NILMWV
Trigger: AACCCACATCAAAATGTTCCATCTCCCAATGAGCAA...CCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCTTTCGAGCAGCACGGTaGGAAAGCAGGCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CRLFFTAWWFSASSKSRSFRAAR*ESRRFL
Trigger: AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAA...GCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGGCCCTATGACCTGTaGCCTATGTTTTCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASGPYDL*PMFSWF
Trigger: AAACCACGAAAACATAGGCCACAGGTCATAGGGCCC...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCACCAGCCCAATGGTCTTaGGCATTTGGGTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISPAQWS*AFGWLQ
Trigger: TTGAAGCCACCCAAATGCTCAAGACCATTGGGCTGG...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR TCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGAGATGGAACATTTTaGTGTGGGTTTGATGTACCT +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSGDGTF*CGFDVP
Trigger: AGGTACATCAAACCCACATCAAAATGTTCCATCTCC...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR TCA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAATTCCAGGCTTTTTGTaGGTTCCCTTAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: MTASWRAVASGFISCLCRIPGFL*VPLIFA
Trigger: GGCAAAGATTAAGGGAACTCACAAAAAGCCTGGAAT...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR GCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGGGCTTGCTCGGATGCTaGCTCCAGCACTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKGLLGC*LQHSGL
Trigger: AAGTCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCC...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACT +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKTQAQG*LQRCFT
Trigger: AGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGT...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCACCTTGGCACAGGCACTaGAACAAGAACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISPWHRH*NKNSWT
Trigger: GGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGG...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR GCA 90 bp CTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAAGGAAGGGTTCATTATaGGTCTTCCTCCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LVDSSSQPGGFLHLVSPGRKGSL*VFLLSR
Trigger: CCTGCTCAGGAGGAAGACGCATAATGAACCCTTCCT...TCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTGGGTTCATCAGTTGTaGCTCCACCAAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGWVHQL*LHQVHH
Trigger: ATGATGAACTTGGTGGAGGCACAACTGATGAACCCA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCATACAGGGGAGGTGTCTaGACTTCTGGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISYRGGV*TSGGRS
Trigger: GCTTCTACCTCCAGAAGTCCAGACACCTCCCCTGTA...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTACTGCTCATCCTCTCTaGGAGATTCCAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SQPGGFLHLVSPGASGTLTAHPL*EIPGFL
Trigger: CAAAAAGCCTGGAATCTCCCAGAGAGGATGAGCAGT...AAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTACTGCTCATCCTCTCTaGGAGATTCCAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASTAHPL*EIPGFL
Trigger: CAAAAAGCCTGGAATCTCCCAGAGAGGATGAGCAGT...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGTAGGCCCAAAGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTGTACTTCACTTTCTCTaGACCAGTTTGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SRPKELTYLAISARTRSCVLHFL*TSLGHL
Trigger: CAGGTGGCCCAAACTGGTCCAGAGAAAGTGAAGTAC...ACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCTTTGGGCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGGTACTTCACTTTCTCTaGACCAGTTTGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SCRLFFTAWWFSASSKSRVLHFL*TSLGHL
Trigger: CAGGTGGCCCAAACTGGTCCAGAGAAAGTGAAGTAC...CCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLICNKNS*TMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCA...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTCTTCTTCACAGCCTaGTGGTTTTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLFFTA*WFSASS
Trigger: ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGTTGCTCATTGGGAGATaGAACATTTTGATGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRLLIGR*NILMWV
Trigger: AACCCACATCAAAATGTTCCATCTCCCAATGAGCAA...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CCA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGAGTCAGCTTGCTCATTaGGAGATGGAACATTTTGAT +
Preference number: 4 (lower is better)
Translates to: SRGSGREAGCFSGPERIRSQLAH*EMEHFD
Trigger: ATCAAAATGTTCCATCTCCCAATGAGCAAGCTGACT...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CCA 90 bp ATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTGCCATCTTCTTCTCCTaGTGGGGCCAGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: MFLVDSSSQPGGFLHLVSAIFFS*WGQREP
Trigger: AGGTTCCCTCTGGCCCCACCAGGAGAAGAAGATGGC...ACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TGGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTACAGGAACATTGACCTaGAGACATCAGAGATATCAG +
Preference number: 4 (lower is better)
Translates to: WPMFSWFRAARWESRRFLTGTLT*RHQRYQ
Trigger: CTGATATCTCTGATGTCTCCAGGTCAATGTTCCTGT...AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TGGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTCTTTGGTCTTGTCTaGATATTCCAGCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: WPMFSWFRAARWESRRFLFFGLV*IFQPWV
Trigger: TACCCATGGCTGGAATATCCAGACAAGACCAAAGAA...AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTTTTGATGTACCTCTTTaGTGTACCTACAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSFDVPL*CTYSHL
Trigger: GAGATGACTGTAGGTACATCAAAGAGGTACATCAAA...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR TCA 90 bp CGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTTGATTTTGATGTGGGTTTaGTGTACCTCTTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: RGFEQHGGKAGVFFWPTLILMWV*CTSLMY
Trigger: GTACATCAAAGAGGTACATCAAACCCACATCAAAAT...CAAAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGAGATGGAACATTTTaGTGTGGGTTTGATGTACCT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGDGTF*CGFDVP
Trigger: AGGTACATCAAACCCACATCAAAATGTTCCATCTCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR TCA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTCCAGGCTTTTTGTaGGTTCCCTTAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLIPGFL*VPLIFA
Trigger: GGCAAAGATTAAGGGAACTCACAAAAAGCCTGGAAT...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGATTCCAGGCTTTTTGTaGGTTCCCTTAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGIPGFL*VPLIFA
Trigger: GGCAAAGATTAAGGGAACTCACAAAAAGCCTGGAAT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGCAAGTCGAAAGTCTTaGATAGTTAACTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGASRKS*IVNSSG
Trigger: CCCAGAAGAGTTAACTATTCAAGACTTTCGACTTGC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCACATTGGTCTTAGGTaGCTCATATACAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGHIGLR*LIYREN
Trigger: GTTCTCTCTGTATATGAGGCACCTAAGACCAATGTG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCAAGGGGTTCAGCTTTaGAAGTCGAAAGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGQGVQL*KSKVLN
Trigger: ATTCAAGACTTTCGACTTGCAAAGCTGAACCCCTTG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTACCTTTGGTCTTGTCTaGATATTCCAGCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLITFGLV*IFQPWV
Trigger: TACCCATGGCTGGAATATCCAGACAAGACCAAAGGT...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTTCTCTGGACCAGTTTaGGCCACCTGCTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKFSGPV*ATCCSA
Trigger: GGCACTACAGCAGGTGGCCCAAACTGGTCCAGAGAA...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCACTGGAAGAACACAGCTaGTCTAGGATGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISLEEHS*SRMALM
Trigger: CATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTCTCTTCTTCACAGCCTaGTGGTTTTCTGCATCTAGT +
Preference number: 4 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASLFFTA*WFSASS
Trigger: ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAG...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTAGTCAGCTTGCTCATTaGGAGATGGAACATTTTGAT +
Preference number: 4 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLSQLAH*EMEHFD
Trigger: ATCAAAATGTTCCATCTCCCAATGAGCAAGCTGACT...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTAGTCAGCTTGCTCATTaGGAGATGGAACATTTTGAT +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSSQLAH*EMEHFD
Trigger: ATCAAAATGTTCCATCTCCCAATGAGCAAGCTGACT...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGACAGGAACATTGACCTaGAGACATCAGAGATATCAG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGTGTLT*RHQRYQ
Trigger: CTGATATCTCTGATGTCTCCAGGTCAATGTTCCTGT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTCTTTGGTCTTGTCTaGATATTCCAGCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFFGLV*IFQPWV
Trigger: TACCCATGGCTGGAATATCCAGACAAGACCAAAGAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR TCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTGGGTACAGGAACATTaGCCTGTCCTCTGTGGTACG +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKWVQEH*PVLCGT
Trigger: CGTACCACAGAGGACAGGTCAATGTTCCTGTACCCA...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR TCA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTACTTGATGACTGGGGCTaGGTGCACGTGCATCACCTT +
Preference number: 4 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVLDDWG*VHVHHL
Trigger: AAGGTGATGCACGTGCACTCAGCCCCAGTCATCAAG...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTTGATGTACCTCTTTaGTGTACCTACAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFDVPL*CTYSHL
Trigger: GAGATGACTGTAGGTACATCAAAGAGGTACATCAAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR TCA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTATTTTGATGTGGGTTTaGTGTACCTCTTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: GSGREAGCFSGPERIRQSILMWV*CTSLMY
Trigger: GTACATCAAAGAGGTACATCAAACCCACATCAAAAT...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTATTTGGCTTGCTCGGATaGTGCCTCCAGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVFGLLG*CLQHSG
Trigger: TCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAA...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGGGCTGCCTCCAGAGATaGTTCACTGGACGACTTCTT +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKGCLQR*FTGRLL
Trigger: AAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCC...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTGACTGCTTCCTGGCGTaGAGTGGCATCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: INVSCRLFFTAWWFSASSDCFLA*SGIWVH
Trigger: ATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTC...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAACCCAAAGAGATGACTaGTTCCTGGCGTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVTQRDD*FLACSG
Trigger: GCCACTGCACGCCAGGAAGCAGTCATCTCTTTGGGT...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR GCA 90 bp AGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTGAACCTTGTGGGCTCTaGCTTCACATTGGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: RIDLFGNFSKDPELFLDPEPCGL*LHIGLR
Trigger: CCTAAGACCAATGTGAAGGCAGAGCCCACAAGGTTC...AGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTTGGTGATGGACTTTaGAATAAACAAGGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFGDGL*NKQGVQ
Trigger: CTGAACCCCTTGTTTATTGCAAAGTCCATCACCAAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR GCA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGTTTGGTGATGGACTTTaGAATAAACAAGGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVFGDGL*NKQGVQ
Trigger: CTGAACCCCTTGTTTATTGCAAAGTCCATCACCAAA...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp ATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTTTGACCTGTCCTCTGTaGTACGAGAGGTACAGGGGA +
Preference number: 4 (lower is better)
Translates to: MFLVDSSSQPGGFLHLVSLTCPL*YERYRG
Trigger: TCCCCTGTACCTCTCGTACCACAGAGGACAGGTCAA...ACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTACTGCCTCCAGCACTCTaGACTTGGGGGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVLPPAL*TWGKLF
Trigger: GAAGAGTTTCCCCCAAGTCCAGAGTGCTGGAGGCAG...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCATGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RLVAFQVQSELGKVMLISCNKNS*TMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCA...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CCA 90 bp ATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTTGGGTCTTGAGTCCTTaGCACAGGCACTGCAACAAG +
Preference number: 4 (lower is better)
Translates to: MFLVDSSSQPGGFLHLVSWVLSP*HRHCNK
Trigger: CTTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCA...ACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTACAAGTGGAACACTTGTaGACTGCGGATCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVQVEHL*TADPQD
Trigger: GTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTGCTCATTGGGAGATaGAACATTTTGATGTGGGTT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLLIGR*NILMWV
Trigger: AACCCACATCAAAATGTTCCATCTCCCAATGAGCAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR CCA 90 bp GCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATCATCGTAGGCTTCAACAGTCAGCTTGCTCATTaGGAGATGGAACATTTTGAT +
Preference number: 4 (lower is better)
Translates to: ASGFISCASTKFIIVGFNSQLAH*EMEHFD
Trigger: ATCAAAATGTTCCATCTCCCAATGAGCAAGCTGACT...GTTGAAGCCTACGATGATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAGTCAGCTTGCTCATTaGGAGATGGAACATTTTGAT +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSQLAH*EMEHFD
Trigger: ATCAAAATGTTCCATCTCCCAATGAGCAAGCTGACT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR CCA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTTTCTTTGGTCTTGTCTaGATATTCCAGCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCFFGLV*IFQPWV
Trigger: TACCCATGGCTGGAATATCCAGACAAGACCAAAGAA...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTGGCCTATGTTTTCGTaGTTTCGAGCAGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKWPMFS*FRAARW
Trigger: CCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR TCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGATTTTGATGTGGGTTTaGTGTACCTCTTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGILMWV*CTSLMY
Trigger: GTACATCAAAGAGGTACATCAAACCCACATCAAAAT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR GCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGAGTTCCCTTAATCTTTaGCACTTCAGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKSSLNL*HFRGSW
Trigger: CCAGGACCCCCTGAAGTGGCAAAGATTAAGGGAACT...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp TCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGCACATTGGTCTTAGGTaGCTCATATACAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SCRLFFTAWWFSASSKSRHIGLR*LIYREN
Trigger: GTTCTCTCTGTATATGAGGCACCTAAGACCAATGTG...CCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAAGTCCAGGAGCAAGTaGAACACTTGTGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVKSRSK*NTCGLR
Trigger: CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTT...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTTGCTCATTGGGAGATaGAACATTTTGATGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GRLVAFQVQSELGKVMLILLIGR*NILMWV
Trigger: AACCCACATCAAAATGTTCCATCTCCCAATGAGCAA...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CCA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTTTTCAGCTTGTTTTaGATCCAGGGATCAATTGAG +
Preference number: 4 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFFSLF*IQGSIE
Trigger: CTCAATTGATCCCTGGATCCAAAACAAGCTGAAAAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CCA 90 bp GCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATCATCGTAGGCTTCAACTTTTTCAGCTTGTTTTaGATCCAGGGATCAATTGAG +
Preference number: 4 (lower is better)
Translates to: ASGFISCASTKFIIVGFNFFSLF*IQGSIE
Trigger: CTCAATTGATCCCTGGATCCAAAACAAGCTGAAAAA...GTTGAAGCCTACGATGATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp AGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTTGGGTTCATCAGTTGTaGCTCCACCAAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: RIDLFGNFSKDPELFLDPWVHQL*LHQVHH
Trigger: ATGATGAACTTGGTGGAGGCACAACTGATGAACCCA...AGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGGGGAAACTCTTCCTTTaGCATCTGGTAGCAGGACAA +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKGKLFL*HLVAGQ
Trigger: TTGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCC...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CCA 90 bp TCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTTTTTTCAGCTTGTTTTaGATCCAGGGATCAATTGAG +
Preference number: 4 (lower is better)
Translates to: SQPGGFLHLVSPGASGTLFFSLF*IQGSIE
Trigger: CTCAATTGATCCCTGGATCCAAAACAAGCTGAAAAA...AAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTTTTCGAGCAGCACGGTaGGAAAGCAGGCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: INVSCRLFFTAWWFSASSFRAAR*ESRRFL
Trigger: AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAA...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR GCA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTCCTCTTGTCCAGCTTTaGCCCCAATTAAAGACTGTC +
Preference number: 4 (lower is better)
Translates to: INVSCRLFFTAWWFSASSPLVQL*PQLKTV
Trigger: GACAGTCTTTAATTGGGGGCAAAGCTGGACAAGAGG...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTTGCAACAAGAACTCTTaGACCATGTTGCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: INVSCRLFFTAWWFSASSCNKNS*TMLLQG
Trigger: GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCA...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR TCA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGGGAGATGGAACATTTTaGTGTGGGTTTGATGTACCT +
Preference number: 4 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKGDGTF*CGFDVP
Trigger: AGGTACATCAAACCCACATCAAAATGTTCCATCTCC...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CCA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTACCTTTGGTCTTGTCTaGATATTCCAGCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: INVSCRLFFTAWWFSASSTFGLV*IFQPWV
Trigger: TACCCATGGCTGGAATATCCAGACAAGACCAAAGGT...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR TCA 90 bp ATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTTTTGATGTACCTCTTTaGTGTACCTACAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: MFLVDSSSQPGGFLHLVSFDVPL*CTYSHL
Trigger: GAGATGACTGTAGGTACATCAAAGAGGTACATCAAA...ACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
3UTR CAA 72 bp AGTGACACTTGTTTATTCACGGAAGATAAGTATAGATaGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SDTCLFTEDKYR*FSHGSLRSIFR
Trigger: CCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATACTTATCTTCCGTGAATAAACAAGTGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHWSRMA*MTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCA...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp CTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGACCCGGAGCTGTTTCTaGATCCTTGGCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LEEHSWSRMALMTGAECTTRSCF*ILGCQG
Trigger: GCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGGGT...CGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGGGGACTGAGTTTGGCTaGCTCGGATGCTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMGTEFG*LGCCLQ
Trigger: CTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCCC...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGTTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGAGCAAGTGGAACACTaGTGGACTGCGGATCCCCAG +
Preference number: 5 (lower is better)
Translates to: VQEQVEHLWTADPQDTQREQVEH*WTADPQ
Trigger: CTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS GCA 90 bp AGATCCAGCTGCTCTTCGAAGAGGCCAAGGACATGGGATGGGTCATaGTGCACAGTGGTGGCTGTGTCCTTACTGGATCTGACCCGCCAT +
Preference number: 5 (lower is better)
Translates to: RSSCSSKRPRTWDGS*CTVVAVSLLDLTRH
Trigger: ATGGCGGGTCAGATCCAGTAAGGACACAGCCACCACTGTGCAGCATGACCCATCCCATGTCCTTGGCCTCTTCGAAGAGCAGCTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604400.5
ENST00000631424.1
CDS-3UTR CAA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAGGGACTGAGTTTGGCTaGCTCGGATGCTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RGSGREAGCFSGPERIRQGTEFG*LGCCLQ
Trigger: CTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCCC...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGTCCTTGGCACAGGCACTGCAACAAGAACTCTTGGACCATGTTGCTGCAAGGCGGGACTGAGTTTGGCTaGCTCGGATGCTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SPWHRHCNKNSWTMLLQGGTEFG*LGCCLQ
Trigger: CTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCCC...GCCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAGTGCCTGTGCCAAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGGGGACTGAGTTTGGCTaGCTCGGATGCTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: TASWRAVASGFISCLCRRGTEFG*LGCCLQ
Trigger: CTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCCC...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGTTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: ASSKSRSKWNTCGLRIPRFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...CCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS GCA 90 bp TTGGACCATGTTGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGCTaGCTCCAGAGATGCTTCACTGGACGACTTCTTGATCAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: LDHVAARPQETQAQG*LQRCFTGRLLDQCL
Trigger: CAGACACTGATCAAGAAGTCGTCCAGTGAAGCATCTCTGGAGGCAGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000603323.5
ENST00000603852.5
ENST00000603870.5
ENST00000604400.5
ENST00000604834.6
ENST00000605080.5
ENST00000614305.2
ENST00000631424.1
ENST00000631921.1
ENST00000632179.1
ENST00000632969.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCCTGAGTTCTAGACCCTaGCCTGGGAGTGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPLSSRP*PGSESQ
Trigger: CTGGCTCTCACTCCCAGGCAAGGGTCTAGAACTCAG...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGCTGAGTTCTAGACCCTaGCCTGGGAGTGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TASWRAVASGFISCLCRRLSSRP*PGSESQ
Trigger: CTGGCTCTCACTCCCAGGCAAGGGTCTAGAACTCAG...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGAGTACGGGACTGAGTTaGGCTTGCTCGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: TASWRAVASGFISCLCRRSTGLS*ACSDAA
Trigger: GGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACT...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGAGTACGGGACTGAGTTaGGCTTGCTCGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: SRGSGREAGCFSGPERIRSTGLS*ACSDAA
Trigger: GGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACT...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTAFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGTGCACGTGCATCACCTaGACCAGCATCCTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: ASSKSRSKWNTCGLRIPRCTCIT*TSILSA
Trigger: GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCA...CCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp TCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: SASSKSRSKWNTCGLRIPWSRMA*MTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCA...GGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp CTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGGTCCTCCCAATCACCTaGTCTTTAGAGACAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LEEHSWSRMALMTGAECTVLPIT*SLETAA
Trigger: GGCTGCTGTCTCTAAAGACAAGGTGATTGGGAGGAC...CGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp GTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGTCCTCCCAATCACCTaGTCTTTAGAGACAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VQEQVEHLWTADPQDTQRVLPIT*SLETAA
Trigger: GGCTGCTGTCTCTAAAGACAAGGTGATTGGGAGGAC...TCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS TCA 90 bp CCAGTGCGTGTAGATCTCAGGTTTCTTGAAGTAGCAGTACGGGACTaGGTTTGGCTTGCTCGGATGCTGCCTCCAGCACTCTGGACTTGG +
Preference number: 5 (lower is better)
Translates to: PVRVDLRFLEVAVRD*VWLARMLPPALWTW
Trigger: CCAAGTCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCTACACGCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000603218.1
ENST00000603323.5
ENST00000603852.5
ENST00000603870.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000605080.5
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000632179.1
ENST00000632969.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGCTGAGTTCTAGACCCTaGCCTGGGAGTGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVLSSRP*PGSESQ
Trigger: CTGGCTCTCACTCCCAGGCAAGGGTCTAGAACTCAG...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGGACTGAGTTTGGCTaGCTCGGATGCTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGTEFG*LGCCLQ
Trigger: CTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTAGTACGGGACTGAGTTaGGCTTGCTCGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: GSGREAGCFSGPERIRQSSTGLS*ACSDAA
Trigger: GGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACT...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAACTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: RGSGREAGCFSGPERIRQLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTTTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: GSGREAGCFSGPERIRQSFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GSGREAGCFSGPERIRQSWSRMA*MTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCA...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGTGGAAGGGAGGCTGGTaGCTTTTCAGGTCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVWKGGW*LFRSRA
Trigger: CGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCA...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTTGGAAGGGAGGCTGGTaGCTTTTCAGGTCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: GSGREAGCFSGPERIRQSWKGGW*LFRSRA
Trigger: CGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCA...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGATGGAAGGGAGGCTGGTaGCTTTTCAGGTCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: MTASWRAVASGFISCLCRWKGGW*LFRSRA
Trigger: CGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCA...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGAGCAAGTGGAACACTaGTGGACTGCGGATCCCCAG +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVEQVEH*WTADPQ
Trigger: CTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp GGCTGCCAGGGCCCTATGACCTGTGGCCTATGTTTTCGTGGTTTCGAGCAGCACATGGGTACAGGAACATaGACCTGGAGACATCAGAGA +
Preference number: 5 (lower is better)
Translates to: GCQGPMTCGLCFRGFEQHMGTGT*TWRHQR
Trigger: TCTCTGATGTCTCCAGGTCAATGTTCCTGTACCCAT...GTGCTGCTCGAAACCACGAAAACATAGGCCACAGGTCATAGGGCCCTGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp CTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGGGCTCTGCCTTCACATaGGTCTTAGGTGCCTCATAT +
Preference number: 5 (lower is better)
Translates to: LEEHSWSRMALMTGAECTGSAFT*VLGASY
Trigger: ATATGAGGCACCTAAGACCAATGTGAAGGCAGAGCC...CGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGACCCGGAGCTGTTTCTaGATCCTTGGCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGTRSCF*ILGCQG
Trigger: GCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGGGT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS TCA 90 bp GCTGATCATACAGGTCGTGCCAGTGCGTGTAGATCTCAGGTTTCTTaGAGTAGCAGTACGGGACTGAGTTTGGCTTGCTCGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: ADHTGRASACRSQVS*SSSTGLSLACSDAA
Trigger: GGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCTACACGCACTGGCACGACCTGTATGATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000603218.1
ENST00000603323.5
ENST00000603852.5
ENST00000603870.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000605080.5
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000632179.1
ENST00000632969.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGATGGGTACAGGAACATaGACCTGTCCTCTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: ASSKSRSKWNTCGLRIPRMGTGT*TCPLWY
Trigger: GTACCACAGAGGACAGGTCAATGTTCCTGTACCCAT...CCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGCTGAGTTCTAGACCCTaGCCTGGGAGTGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRLSSRP*PGSESQ
Trigger: CTGGCTCTCACTCCCAGGCAAGGGTCTAGAACTCAG...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp AGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAGGGGAAACTCTTCCTTaGGCATCTGGTAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: RGSGREAGCFSGPERIRQGETLP*ASGSRT
Trigger: TGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCCC...TTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGGGGAAACTCTTCCTTaGGCATCTGGTAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: SRGSGREAGCFSGPERIRGETLP*ASGSRT
Trigger: TGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCCC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTTCCAGCACTCTGGACTaGGGGGAAACTCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTASSTLD*GETLPL
Trigger: CAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGGA...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGTCCAGCACTCTGGACTaGGGGGAAACTCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: SRGSGREAGCFSGPERIRSSTLD*GETLPL
Trigger: CAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGGA...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTGGGACTGAGTTTGGCTaGCTCGGATGCTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIGTEFG*LGCCLQ
Trigger: CTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCCC...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAGTACGGGACTGAGTTaGGCTTGCTCGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSTGLS*ACSDAA
Trigger: GGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp AGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGTTCTCCTTCAGCTGTTaGATGAGAGCCCGGATCACA +
Preference number: 5 (lower is better)
Translates to: RSKWNTCGLRIPRTPKEMFSFSC*MRARIT
Trigger: TGTGATCCGGGCTCTCATCAAACAGCTGAAGGAGAA...CATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp CAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: QVEHLWTADPQDTQRDDCNSWTM*LQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTT...GCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGCTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTATTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGTGCACGTGCATCACCTaGACCAGCATCCTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVCTCIT*TSILSA
Trigger: GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCA...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGWSRMA*MTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGAGCAAGTGGAACACTaGTGGACTGCGGATCCCCAG +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGEQVEH*WTADPQ
Trigger: CTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp AGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGATGGGTACAGGAACATaGACCTGGAGACATCAGAGA +
Preference number: 5 (lower is better)
Translates to: SPGASGTLVDCGSPGHPKMGTGT*TWRHQR
Trigger: TCTCTGATGTCTCCAGGTCAATGTTCCTGTACCCAT...CTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp AAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTGCTATCCCAGCCTCACCTTaGGTCTTGTCTGGATATTCC +
Preference number: 5 (lower is better)
Translates to: KWNTCGLRIPRTPKEMTAIPASP*VLSGYS
Trigger: GGAATATCCAGACAAGACCAAAGGTGAGGCTGGGAT...AGCAGTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTGGGGAAACTCTTCCTTaGGCATCTGGTAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: GREAGCFSGPERIRQSDAGETLP*ASGSRT
Trigger: TGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCCC...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTAGTACGGGACTGAGTTaGGCTTGCTCGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASSTGLS*ACSDAA
Trigger: GGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACT...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGAGTACGGGACTGAGTTaGGCTTGCTCGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKSTGLS*ACSDAA
Trigger: GGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACT...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GGGTGGCTTCAAAGCGGTCCTCAAGGACACTGGAAGAACACAGCTGGTCTAGGAGCCTCCATGACAAACTaGTCACTGATGCGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: GWLQSGPQGHWKNTAGLGASMTN*SLMRKH
Trigger: ATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGC...TCCTAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACCGCTTTGAAGCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: TASWRAVASGFISCLCRRNSWTM*LQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTT...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: SRGSGREAGCFSGPERIRLQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTGCACGTGCATCACCTaGACCAGCATCCTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGCTCIT*TSILSA
Trigger: GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGTGCACGTGCATCACCTaGACCAGCATCCTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVCTCIT*TSILSA
Trigger: GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCA...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIWSRMA*MTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCA...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCWSRMA*MTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCA...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp TCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTTGGAAGGGAGGCTGGTaGCTTTTCAGGTCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: SQPGGFLHLVSPGASGTLWKGGW*LFRSRA
Trigger: CGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCA...AAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGAGCAAGTGGAACACTaGTGGACTGCGGATCCCCAG +
Preference number: 5 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASEQVEH*WTADPQ
Trigger: CTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp CTGGAAGAACACAGCTGGTCTAGGATGGCCTTGATGACTGGGGCTGAGTGCACGACAAGGGGTTCAGCTTaGCAAGTCGAAAGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: LEEHSWSRMALMTGAECTTRGSA*QVESLE
Trigger: TTCAAGACTTTCGACTTGCAAAGCTGAACCCCTTGT...CGTGCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCAGCTGTGTTCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp AAGAACTCTTGGACCATGTTGCTGCAAGGCCTCAGGAAACCCAGGCACAGGGCTAGCAGGCGTTTTCTTTaGGCCTACTTTGGTGATGGA +
Preference number: 5 (lower is better)
Translates to: KNSWTMLLQGLRKPRHRASRRFL*AYFGDG
Trigger: TCCATCACCAAAGTAGGCCAAAAGAAAACGCCTGCT...AGCCCTGTGCCTGGGTTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAATGGGTACAGGAACATaGACCTGTCCTCTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: MTASWRAVASGFISCLCRMGTGT*TCPLWY
Trigger: GTACCACAGAGGACAGGTCAATGTTCCTGTACCCAT...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTATCCCAGCCTCACCTTaGGTCTTGTCTGGATATTCC +
Preference number: 5 (lower is better)
Translates to: GREAGCFSGPERIRQSDAIPASP*VLSGYS
Trigger: GGAATATCCAGACAAGACCAAAGGTGAGGCTGGGAT...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAGGGGAAACTCTTCCTTaGGCATCTGGTAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLGETLP*ASGSRT
Trigger: TGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCCC...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGGGAAACTCTTCCTTaGGCATCTGGTAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGETLP*ASGSRT
Trigger: TGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGGGGGAAACTCTTCCTTaGGCATCTGGTAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRGETLP*ASGSRT
Trigger: TGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCCC...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTCCAGCACTCTGGACTaGGGGGAAACTCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSSTLD*GETLPL
Trigger: CAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGGA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGTCCAGCACTCTGGACTaGGGGGAAACTCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRSSTLD*GETLPL
Trigger: CAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGGA...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGGCCTCCATGACAAACTaGTCACTGATGCGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: TASWRAVASGFISCLCRRASMTN*SLMRKH
Trigger: ATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGC...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTTTCTCCTTCAGCTGTTaGATGAGAGCCCGGATCACA +
Preference number: 5 (lower is better)
Translates to: GSGREAGCFSGPERIRQSFSFSC*MRARIT
Trigger: TGTGATCCGGGCTCTCATCAAACAGCTGAAGGAGAA...ACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TCCTCTAGCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTTGAGCATTTGGTCACTGGACGACTTCTaGATCAGTGTCTGTAGTACA +
Preference number: 5 (lower is better)
Translates to: SSSPCAWICSSPMVLSIWSLDDF*ISVCST
Trigger: TGTACTACAGACACTGATCAAGAAGTCGTCCAGTGA...CCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp GGGTGGCTTCAAAGCGGTCCTCAAGGACACTGGAAGAACACAGCTGGTCTAGGATCACTGGACGACTTCTaGATCAGTGTCTGTAGTACA +
Preference number: 5 (lower is better)
Translates to: GWLQSGPQGHWKNTAGLGSLDDF*ISVCST
Trigger: TGTACTACAGACACTGATCAAGAAGTCGTCCAGTGA...TCCTAGACCAGCTGTGTTCTTCCAGTGTCCTTGAGGACCGCTTTGAAGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp GAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGACACCCAAAGAGATGACTCACTGGACGACTTCTaGATCAGTGTCTGTAGTACA +
Preference number: 5 (lower is better)
Translates to: EQVEHLWTADPQDTQRDDSLDDF*ISVCST
Trigger: TGTACTACAGACACTGATCAAGAAGTCGTCCAGTGA...GTCATCTCTTTGGGTGTCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp TTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTTTGGCCTACTTCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: FVVSSSTVGKQAFSFGLLLQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...AAGTAGGCCAAAAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVLQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGCTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp TCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGGAGCAAGTGGAACACTaGTGGACTGCGGATCCCCAG +
Preference number: 5 (lower is better)
Translates to: SCRLFFTAWWFSASSKSREQVEH*WTADPQ
Trigger: CTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTC...CCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp CACAGCCTGCCTCACAGCAAGGAAGGGTTCATTATGCGTCTTCCTCCTGAGCAGCTGAGTTCTTTGGTCTaGTCTGGATATTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: HSLPHSKEGFIMRLPPEQLSSLV*SGYSSH
Trigger: ATGGCTGGAATATCCAGACAAGACCAAAGAACTCAG...CTGCTCAGGAGGAAGACGCATAATGAACCCTTCCTTGCTGTGAGGCAGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TCCTCTAGCCCCTGTGCCTGGATCTGTTCCAGCCCAATGGTCTTGAGCATTTGGCTGAGTTCTTTGGTCTaGTCTGGATATTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: SSSPCAWICSSPMVLSIWLSSLV*SGYSSH
Trigger: ATGGCTGGAATATCCAGACAAGACCAAAGAACTCAG...CCAAATGCTCAAGACCATTGGGCTGGAACAGATCCAGGCACAGGGGCTAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGCTCTTTCTGGAACCTaGTGGGCTCTGCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGALSGT*WALPSH
Trigger: ATGTGAAGGCAGAGCCCACAAGGTTCCAGAAAGAGC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGCTCTTTCTGGAACCTaGTGGGCTCTGCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVALSGT*WALPSH
Trigger: ATGTGAAGGCAGAGCCCACAAGGTTCCAGAAAGAGC...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp CATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGATCCCCAGGATCCTCTTGTCCAGCTTaGCCCCCAATTAAAGACTGT +
Preference number: 5 (lower is better)
Translates to: HLVSPGASGTLVDCGSPGSSCPA*PPIKDC
Trigger: ACAGTCTTTAATTGGGGGCAAAGCTGGACAAGAGGA...TCCTGGGGATCCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAGCCTCACCTTTGGTCTaGTCTGGATATTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLASPLV*SGYSSH
Trigger: ATGGCTGGAATATCCAGACAAGACCAAAGGTGAGGC...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTTCCAGCACTCTGGACTaGGGGGAAACTCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: SQPGGFLHLVSPGASGTLSSTLD*GETLPL
Trigger: CAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGGA...AAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp ACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTTCCAGCACTCTGGACTaGGGGGAAACTCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: TAWWFSASSKSRSKWNTCSSTLD*GETLPL
Trigger: CAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGGA...ACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCCAGCACTCTGGACTaGGGGGAAACTCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: GRLVAFQVQSELGKVMLISSTLD*GETLPL
Trigger: CAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGGA...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TGGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTGCCTCCATGACAAACTaGTCACTGATGCGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: WPMFSWFRAARWESRRFLASMTN*SLMRKH
Trigger: ATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGC...AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGGCCTCCATGACAAACTaGTCACTGATGCGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVASMTN*SLMRKH
Trigger: ATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGC...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTCTCCTTCAGCTGTTaGATGAGAGCCCGGATCACA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFSFSC*MRARIT
Trigger: TGTGATCCGGGCTCTCATCAAACAGCTGAAGGAGAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGTTCTCCTTCAGCTGTTaGATGAGAGCCCGGATCACA +
Preference number: 5 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVFSFSC*MRARIT
Trigger: TGTGATCCGGGCTCTCATCAAACAGCTGAAGGAGAA...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTATTCTCCTTCAGCTGTTaGATGAGAGCCCGGATCACA +
Preference number: 5 (lower is better)
Translates to: EGRLVAFQVQSELGKVMLFSFSC*MRARIT
Trigger: TGTGATCCGGGCTCTCATCAAACAGCTGAAGGAGAA...TAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGTCACTGGACGACTTCTaGATCAGTGTCTGTAGTACA +
Preference number: 5 (lower is better)
Translates to: SRGSGREAGCFSGPERIRSLDDF*ISVCST
Trigger: TGTACTACAGACACTGATCAAGAAGTCGTCCAGTGA...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGNSWTM*LQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVNSWTM*LQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTT...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCATTCATCCGCTGGGTCTaGAGTCCTTGGCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: RLVAFQVQSELGKVMLISFIRWV*SPWHRH
Trigger: GTGCCTGTGCCAAGGACTCAAGACCCAGCGGATGAA...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGAGATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCGATTTTATAGTCAGCTaGCTCATTGGGAGATGGAAC +
Preference number: 5 (lower is better)
Translates to: RDDCFLACSGIWVHQLCLDFIVS*LIGRWN
Trigger: GTTCCATCTCCCAATGAGCAAGCTGACTATAAAATC...GAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGACTGCGGGGCTCTGCCTTCACATaGGTCTTAGGTGCCTCATAT +
Preference number: 5 (lower is better)
Translates to: WFSASSKSRSKWNTCGLRGSAFT*VLGASY
Trigger: ATATGAGGCACCTAAGACCAATGTGAAGGCAGAGCC...CCGCAGTCCACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGCTCTGCCTTCACATaGGTCTTAGGTGCCTCATAT +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGSAFT*VLGASY
Trigger: ATATGAGGCACCTAAGACCAATGTGAAGGCAGAGCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCGCTCTTTCTGGAACCTaGTGGGCTCTGCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: CRLFFTAWWFSASSKSRSALSGT*WALPSH
Trigger: ATGTGAAGGCAGAGCCCACAAGGTTCCAGAAAGAGC...GCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTATGGGTACAGGAACATaGACCTGTCCTCTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIMGTGT*TCPLWY
Trigger: GTACCACAGAGGACAGGTCAATGTTCCTGTACCCAT...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTATCCCAGCCTCACCTTaGGTCTTGTCTGGATATTCC +
Preference number: 5 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIIPASP*VLSGYS
Trigger: GGAATATCCAGACAAGACCAAAGGTGAGGCTGGGAT...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGCCTCCATGACAAACTaGTCACTGATGCGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGASMTN*SLMRKH
Trigger: ATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp CAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTGTGGCCTCCATGACAAACTaGTCACTGATGCGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: QPGGFLHLVSPGASGTLVASMTN*SLMRKH
Trigger: ATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGC...CACAAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp TCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTTTCTCCTTCAGCTGTTaGATGAGAGCCCGGATCACA +
Preference number: 5 (lower is better)
Translates to: SQPGGFLHLVSPGASGTLFSFSC*MRARIT
Trigger: TGTGATCCGGGCTCTCATCAAACAGCTGAAGGAGAA...AAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGTCACTGGACGACTTCTaGATCAGTGTCTGTAGTACA +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVSLDDF*ISVCST
Trigger: TGTACTACAGACACTGATCAAGAAGTCGTCCAGTGA...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKLQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASLQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTCTGCAACAAGAACTCTaGGACCATGTTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: GRLVAFQVQSELGKVMLILQQEL*DHVAAR
Trigger: CCTTGCAGCAACATGGTCCAAGAGTTCTTGTTGCAG...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCACTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: RLVAFQVQSELGKVMLISLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp ACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAAGGATTCATTTCCTTCTCTaGTTTGCCTCCACCAAGTTC +
Preference number: 5 (lower is better)
Translates to: TASWRAVASGFISCLCRRIHFLL*FASTKF
Trigger: GAACTTGGTGGAGGCAAACAAGAGAAGGAAATGAAT...CCTTCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp AGTAGGGGAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGGATTTTATAGTCAGCTaGCTCATTGGGAGATGGAAC +
Preference number: 5 (lower is better)
Translates to: SRGSGREAGCFSGPERIRDFIVS*LIGRWN
Trigger: GTTCCATCTCCCAATGAGCAAGCTGACTATAAAATC...CCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTCCCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGATGGGTACAGGAACATaGACCTGGAGACATCAGAGA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGMGTGT*TWRHQR
Trigger: TCTCTGATGTCTCCAGGTCAATGTTCCTGTACCCAT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TGGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTGGATCCAGGGATCAATaGAGGCACAAAGGATTAATG +
Preference number: 5 (lower is better)
Translates to: WPMFSWFRAARWESRRFLGSRDQ*RHKGLM
Trigger: CATTAATCCTTTGTGCCTCAATTGATCCCTGGATCC...AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTGCCTCCACCAAGTTCATACCTTGTTTTTCAGCTaGTTTTGGATCCAGGGATCA +
Preference number: 5 (lower is better)
Translates to: FLACSGIWVHQLCLHQVHTLFFS*FWIQGS
Trigger: TGATCCCTGGATCCAAAACAAGCTGAAAAACAAGGT...ATGAACTTGGTGGAGGCACAACTGATGAACCCAGATGCCACTGCACGCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGAGCAGGCGTTTTCTTTaGGCCTACTTTGGTGATGGA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSRRFL*AYFGDG
Trigger: TCCATCACCAAAGTAGGCCAAAAGAAAACGCCTGCT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGGCCTCACCTTTGGTCTaGTCTGGATATTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: SCRLFFTAWWFSASSKSRASPLV*SGYSSH
Trigger: ATGGCTGGAATATCCAGACAAGACCAAAGGTGAGGC...CCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTCACTGGACGACTTCTaGATCAGTGTCTGTAGTACA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGSLDDF*ISVCST
Trigger: TGTACTACAGACACTGATCAAGAAGTCGTCCAGTGA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTGGTCTAGGATGGCCTaGATGACTGGGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKWSRMA*MTGAEC
Trigger: GCACTCAGCCCCAGTCATCAAGGCCATCCTAGACCA...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GAAGTGGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATTTCCTTCTCTTGTTaGCCTCCACCAAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: EVEGRLVAFQVQSELGKVISFSC*PPPSSS
Trigger: TGATGAACTTGGTGGAGGCAAACAAGAGAAGGAAAT...CACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAATTTCCTTCTCTTGTTaGCCTCCACCAAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: MTASWRAVASGFISCLCRISFSC*PPPSSS
Trigger: TGATGAACTTGGTGGAGGCAAACAAGAGAAGGAAAT...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAATTCATTTCCTTCTCTaGTTTGCCTCCACCAAGTTC +
Preference number: 5 (lower is better)
Translates to: MTASWRAVASGFISCLCRIHFLL*FASTKF
Trigger: GAACTTGGTGGAGGCAAACAAGAGAAGGAAATGAAT...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp ATGACTGCTTCCTGGCGTGCAGTGGCATCTGGGTTCATCAGTTGTCTGTGTAGAGATTTTATAGTCAGCTaGCTCATTGGGAGATGGAAC +
Preference number: 5 (lower is better)
Translates to: MTASWRAVASGFISCLCRDFIVS*LIGRWN
Trigger: GTTCCATCTCCCAATGAGCAAGCTGACTATAAAATC...TCTACACAGACAACTGATGAACCCAGATGCCACTGCACGCCAGGAAGCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCTGAGTTCTTTGGTCTaGTCTGGATATTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGLSSLV*SGYSSH
Trigger: ATGGCTGGAATATCCAGACAAGACCAAAGAACTCAG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TGGCCTATGTTTTCGTGGTTTCGAGCAGCACGGTGGGAAAGCAGGCGTTTTCTTGCTTTTCTGAGTTCTTaGGTCTTGTCTGGATATTCC +
Preference number: 5 (lower is better)
Translates to: WPMFSWFRAARWESRRFLAFLSS*VLSGYS
Trigger: GGAATATCCAGACAAGACCAAAGAACTCAGAAAAGC...AAGAAAACGCCTGCTTTCCCACCGTGCTGCTCGAAACCACGAAAACATAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGGATCCAGGGATCAATaGAGGCACAAAGGATTAATG +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGGSRDQ*RHKGLM
Trigger: CATTAATCCTTTGTGCCTCAATTGATCCCTGGATCC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGACAAGGGGTTCAGCTTaGCAAGTCGAAAGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGTRGSA*QVESLE
Trigger: TTCAAGACTTTCGACTTGCAAAGCTGAACCCCTTGT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTACCCGGAGCTGTTTCTaGATCCTTGGCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: INVSCRLFFTAWWFSASSTRSCF*ILGCQG
Trigger: GCCCTGGCAGCCAAGGATCAAGAAACAGCTCCGGGT...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCTCCTCTTGTCCAGCTTaGCCCCCAATTAAAGACTGT +
Preference number: 5 (lower is better)
Translates to: CRLFFTAWWFSASSKSRSSSCPA*PPIKDC
Trigger: ACAGTCTTTAATTGGGGGCAAAGCTGGACAAGAGGA...GCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCAATCCCAGCCTCACCTTaGGTCTTGTCTGGATATTCC +
Preference number: 5 (lower is better)
Translates to: RLVAFQVQSELGKVMLISIPASP*VLSGYS
Trigger: GGAATATCCAGACAAGACCAAAGGTGAGGCTGGGAT...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTACGGGACTGAGTTaGGCTTGCTCGGATGCTGCC +
Preference number: 5 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVSTGLS*ACSDAA
Trigger: GGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACT...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTTTTGTGAGTTCCTCTTaGATGTACCTACAGTCATCT +
Preference number: 5 (lower is better)
Translates to: GREAGCFSGPERIRQSDAFVSSS*MYLQSS
Trigger: AGATGACTGTAGGTACATCAAAGAGGAACTCACAAA...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCAAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: RLVAFQVQSELGKVMLISNSWTM*LQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTT...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGATTTTATAGTCAGCTaGCTCATTGGGAGATGGAAC +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGDFIVS*LIGRWN
Trigger: GTTCCATCTCCCAATGAGCAAGCTGACTATAAAATC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGCTTTTCTGAGTTCTTaGGTCTTGTCTGGATATTCC +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGAFLSS*VLSGYS
Trigger: GGAATATCCAGACAAGACCAAAGAACTCAGAAAAGC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGATCCAGGGATCAATaGAGGCACAAAGGATTAATG +
Preference number: 5 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASGSRDQ*RHKGLM
Trigger: CATTAATCCTTTGTGCCTCAATTGATCCCTGGATCC...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGACCTTGTTTTTCAGCTaGTTTTGGATCCAGGGATCA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGTLFFS*FWIQGS
Trigger: TGATCCCTGGATCCAAAACAAGCTGAAAAACAAGGT...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTACAAGGGGTTCAGCTTaGCAAGTCGAAAGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASTRGSA*QVESLE
Trigger: TTCAAGACTTTCGACTTGCAAAGCTGAACCCCTTGT...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGTTTGTGAGTTCCTCTTaGATGTACCTACAGTCATCT +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGFVSSS*MYLQSS
Trigger: AGATGACTGTAGGTACATCAAAGAGGAACTCACAAA...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603870.5
ENST00000632969.1
CDS-3UTR CAA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCAGCCTCCATGACAAACTaGTCACTGATGCGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: RLVAFQVQSELGKVMLISASMTN*SLMRKH
Trigger: ATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGC...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp TTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTACTGGGTCTTGAGTCCTaGGCACAGGCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: LMFLVDSSSQPGGFLHLVLGLES*AQALQQ
Trigger: TTGTTGCAGTGCCTGTGCCAAGGACTCAAGACCCAG...TACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTTGCACGTGCATCACCTaGACCAGCATCCTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: INVSCRLFFTAWWFSASSCTCIT*TSILSA
Trigger: GGCACTTAGGATGCTGGTCAAGGTGATGCACGTGCA...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp TCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTGGAACACTTATTTCCTTCTCTTGTTaGCCTCCACCAAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: SQPGGFLHLVSPGASGTLISFSC*PPPSSS
Trigger: TGATGAACTTGGTGGAGGCAAACAAGAGAAGGAAAT...AAGTGTTCCACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp GACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGTATTCATTTCCTTCTCTaGTTTGCCTCCACCAAGTTC +
Preference number: 5 (lower is better)
Translates to: DSSSQPGGFLHLVSPGASIHFLL*FASTKF
Trigger: GAACTTGGTGGAGGCAAACAAGAGAAGGAAATGAAT...ACTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp TGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCATTCATTTCCTTCTCTaGTTTGCCTCCACCAAGTTC +
Preference number: 5 (lower is better)
Translates to: CRLFFTAWWFSASSKSRSIHFLL*FASTKF
Trigger: GAACTTGGTGGAGGCAAACAAGAGAAGGAAATGAAT...GCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp GGAAGGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTCATTTTGATGTGGGTTaGATGTACCTCTTTGATGTA +
Preference number: 5 (lower is better)
Translates to: GREAGCFSGPERIRQSDAHFDVG*MYLFDV
Trigger: TACATCAAAGAGGTACATCAAACCCACATCAAAATG...AGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CAA 90 bp AGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGAGCAAGGCTTTTCTGAGTTCTTaGGTCTTGTCTGGATATTCC +
Preference number: 5 (lower is better)
Translates to: RLFFTAWWFSASSKSRSKAFLSS*VLSGYS
Trigger: GGAATATCCAGACAAGACCAAAGAACTCAGAAAAGC...CTTGCTCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGGAAGATAAGTATAGATaGTTTTCTCATGGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGEDKYR*FSHGSL
Trigger: CAGGCTCCCATGAGAAAACAATCTATACTTATCTTC...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS-3UTR CAA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTGGGGAAACTCTTCCTTaGGCATCTGGTAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: INVSCRLFFTAWWFSASSGETLP*ASGSRT
Trigger: TGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCCC...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp GGGAGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTTTGTGAGTTCCTCTTaGATGTACCTACAGTCATCT +
Preference number: 5 (lower is better)
Translates to: GRLVAFQVQSELGKVMLIFVSSS*MYLQSS
Trigger: AGATGACTGTAGGTACATCAAAGAGGAACTCACAAA...AATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605080.5
ENST00000632179.1
CDS-3UTR CAA 90 bp TATAGATTGTTTTCTCATGGGAGCCTGAGAAGCATCTTCAGGGAGGGAGTCGGGCATTTTGATGTGGGTTaGATGTACCTCTTTGATGTA +
Preference number: 5 (lower is better)
Translates to: YRLFSHGSLRSIFREGVGHFDVG*MYLFDV
Trigger: TACATCAAAGAGGTACATCAAACCCACATCAAAATG...CCCGACTCCCTCCCTGAAGATGCTTCTCAGGCTCCCATGAGAAAACAATCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604834.6
ENST00000614305.2
CDS-3UTR CAA 90 bp AGTAGGCCCAAAGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTGATTTTATAGTCAGCTaGCTCATTGGGAGATGGAAC +
Preference number: 5 (lower is better)
Translates to: SRPKELTYLAISARTRSCDFIVS*LIGRWN
Trigger: GTTCCATCTCCCAATGAGCAAGCTGACTATAAAATC...ACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCTTTGGGCCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS CCA 90 bp TGGTCTTGTCTGGATATTCCAGCCATGGGTACAGGAACATTGACCTaGAGACATCAGAGATATCAGTTGATTTTTCATAGGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: WSCLDIPAMGTGTLT*RHQRYQLIFHRPSS
Trigger: AGAAGATGGCCTATGAAAAATCAACTGATATCTCTGATGTCTCCAGGTCAATGTTCCTGTACCCATGGCTGGAATATCCAGACAAGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000603218.1
ENST00000603323.5
ENST00000603870.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000632969.1
CDS-3UTR CAA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTTTCTCCTTCAGCTGTTaGATGAGAGCCCGGATCACA +
Preference number: 5 (lower is better)
Translates to: INVSCRLFFTAWWFSASSFSFSC*MRARIT
Trigger: TGTGATCCGGGCTCTCATCAAACAGCTGAAGGAGAA...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAACTCTTGGACCATGTaGCTGCAAGGCCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: INVSCRLFFTAWWFSASSNSWTM*LQGLRK
Trigger: TTTCCTGAGGCCTTGCAGCAACATGGTCCAAGAGTT...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCAATTTCCTTCTCTTGTTaGCCTCCACCAAGTTCATCA +
Preference number: 5 (lower is better)
Translates to: RLVAFQVQSELGKVMLISISFSC*PPPSSS
Trigger: TGATGAACTTGGTGGAGGCAAACAAGAGAAGGAAAT...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603852.5
ENST00000605080.5
ENST00000632179.1
ENST00000633642.1
CDS-3UTR CAA 90 bp ATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTAGCAGGCGTTTTCTTTaGGCCTACTTTGGTGATGGA +
Preference number: 5 (lower is better)
Translates to: MFLVDSSSQPGGFLHLVSSRRFL*AYFGDG
Trigger: TCCATCACCAAAGTAGGCCAAAAGAAAACGCCTGCT...ACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp CTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGTCCAGGACATTTTGATGTGGGTTaGATGTACCTCTTTGATGTA +
Preference number: 5 (lower is better)
Translates to: LVDSSSQPGGFLHLVSPGHFDVG*MYLFDV
Trigger: TACATCAAAGAGGTACATCAAACCCACATCAAAATG...TCCTGGACTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp AGAATTGACTTATTTGGCAATTTCAGCAAGGACCCGGAGCTGTTTCTTGATCCTACCTTGTTTTTCAGCTaGTTTTGGATCCAGGGATCA +
Preference number: 5 (lower is better)
Translates to: RIDLFGNFSKDPELFLDPTLFFS*FWIQGS
Trigger: TGATCCCTGGATCCAAAACAAGCTGAAAAACAAGGT...AGGATCAAGAAACAGCTCCGGGTCCTTGCTGAAATTGCCAAATAAGTCAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS-3UTR CAA 90 bp ATTAATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTTCACTGGACGACTTCTaGATCAGTGTCTGTAGTACA +
Preference number: 5 (lower is better)
Translates to: INVSCRLFFTAWWFSASSSLDDF*ISVCST
Trigger: TGTACTACAGACACTGATCAAGAAGTCGTCCAGTGA...ACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000603323.5
ENST00000605080.5
ENST00000631921.1
ENST00000632179.1
CDS-3UTR CAA 90 bp AGGCTGGTTGCTTTTCAGGTCCAGAGCGAATTAGGCAAAGTGATGCTAATTTCACATTTTGATGTGGGTTaGATGTACCTCTTTGATGTA +
Preference number: 5 (lower is better)
Translates to: RLVAFQVQSELGKVMLISHFDVG*MYLFDV
Trigger: TACATCAAAGAGGTACATCAAACCCACATCAAAATG...TGAAATTAGCATCACTTTGCCTAATTCGCTCTGGACCTGAAAAGCAACCAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603852.5
ENST00000633642.1
CDS-3UTR CAA 90 bp AATGTTTCTTGTAGACTCTTCTTCACAGCCTGGTGGTTTTCTGCATCTAGTAAGCATTTTGATGTGGGTTaGATGTACCTCTTTGATGTA +
Preference number: 5 (lower is better)
Translates to: NVSCRLFFTAWWFSASSKHFDVG*MYLFDV
Trigger: TACATCAAAGAGGTACATCAAACCCACATCAAAATG...CTTACTAGATGCAGAAAACCACCAGGCTGTGAAGAAGAGTCTACAAGAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS CCA 90 bp ATACAGAATACAGCCAAAATGGTTCAATGGAAGGAACAATACAGTTaGGAGTTAGATGTTTGTTCAAATCTCTATCTGGTATCTTGTAGC +
Preference number: 5 (lower is better)
Translates to: IQNTAKMVQWKEQYS*ELDVCSNLYLVSCS
Trigger: GCTACAAGATACCAGATAGAGATTTGAACAAACATCTAACTCCCAACTGTATTGTTCCTTCCATTGAACCATTTTGGCTGTATTCTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604400.5
ENST00000631424.1
CDS CCA 72 bp GGAGTGGGGGCACAGCTGGAGGAGACCTGTCCTCTGTaGTACGAGAGGTACAGGGGAGGTGTCTGGACTTCT +
Preference number: 6 (lower is better)
Translates to: GVGAQLEETCPL*YERYRGGVWTS
Trigger: AGAAGTCCAGACACCTCCCCTGTACCTCTCGTACCACAGAGGACAGGTCTCCTCCAGCTGTGCCCCCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000603218.1
ENST00000603870.5
ENST00000604834.6
ENST00000614305.2
ENST00000632969.1
CDS CAA 90 bp GGACTGAGTTTGGCTTGCTCGGATGCTGCCTCCAGCACTCTGGACTaGGGGGAAACTCTTCCTTTGGCATCTGGTAGCAGGACAAGGGCA +
Preference number: 6 (lower is better)
Translates to: GLSLACSDAASSTLD*GETLPLASGSRTRA
Trigger: TGCCCTTGTCCTGCTACCAGATGCCAAAGGAAGAGTTTCCCCCAAGTCCAGAGTGCTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000603218.1
ENST00000603323.5
ENST00000603852.5
ENST00000603870.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000605080.5
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000632179.1
ENST00000632969.1
ENST00000633642.1
CDS GCA 72 bp TGCTCTTCGAAGAGGCCAAGGACATGGGATGGGTCATaGTGCACAGTGGTGGCTGTGTCCTTACTGGATCTG +
Preference number: 6 (lower is better)
Translates to: CSSKRPRTWDGS*CTVVAVSLLDL
Trigger: CAGATCCAGTAAGGACACAGCCACCACTGTGCAGCATGACCCATCCCATGTCCTTGGCCTCTTCGAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604400.5
ENST00000631424.1
CDS GCA 72 bp TTCTCCTTCAGCTGTTTGATGAGAGCCCGGATCACATaGTTATTCAGGCAACCCAGGATGGCCAGGGTTCGG +
Preference number: 6 (lower is better)
Translates to: FSFSCLMRARIT*LFRQPRMARVR
Trigger: CCGAACCCTGGCCATCCTGGGTTGCCTGAATAAGCATGTGATCCGGGCTCTCATCAAACAGCTGAAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000603323.5
ENST00000603852.5
ENST00000603870.5
ENST00000604400.5
ENST00000604834.6
ENST00000605080.5
ENST00000614305.2
ENST00000631424.1
ENST00000631921.1
ENST00000632179.1
ENST00000632969.1
ENST00000633642.1
CDS CCA 72 bp GTGAGTTCCCTTAATCTTTGCCACTTCAGGGGGTCCTaGGTAGGCTCTAAGGGCCTGGATCGCATCTCAGAT +
Preference number: 6 (lower is better)
Translates to: VSSLNLCHFRGS*VGSKGLDRISD
Trigger: ATCTGAGATGCGATCCAGGCCCTTAGAGCCTACCCAGGACCCCCTGAAGTGGCAAAGATTAAGGGAACTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000603323.5
ENST00000603852.5
ENST00000604400.5
ENST00000604834.6
ENST00000614305.2
ENST00000631424.1
ENST00000631921.1
ENST00000633642.1
CDS CAA 72 bp GTTTGGGCCACCTGCTGTAGTGCCTCCATGACAAACTaGTCACTGATGCGTAAGCATCCCAGAGCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: VWATCCSASMTN*SLMRKHPRACA
Trigger: AGCACAGGCTCTGGGATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGCACTACAGCAGGTGGCCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000603323.5
ENST00000603852.5
ENST00000603870.5
ENST00000604834.6
ENST00000605080.5
ENST00000614305.2
ENST00000631921.1
ENST00000632179.1
ENST00000632969.1
ENST00000633642.1
CDS TCA 72 bp GTAGATCTCAGGTTTCTTGAAGTAGCAGTACGGGACTaGGTTTGGCTTGCTCGGATGCTGCCTCCAGCACTC +
Preference number: 6 (lower is better)
Translates to: VDLRFLEVAVRD*VWLARMLPPAL
Trigger: GAGTGCTGGAGGCAGCATCCGAGCAAGCCAAACTCAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000603218.1
ENST00000603323.5
ENST00000603852.5
ENST00000603870.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000605080.5
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000632179.1
ENST00000632969.1
ENST00000633642.1
CDS TCA 72 bp ACAGGTCGTGCCAGTGCGTGTAGATCTCAGGTTTCTTaGAGTAGCAGTACGGGACTGAGTTTGGCTTGCTCG +
Preference number: 6 (lower is better)
Translates to: TGRASACRSQVS*SSSTGLSLACS
Trigger: CGAGCAAGCCAAACTCAGTCCCGTACTGCTACTTCAAGAAACCTGAGATCTACACGCACTGGCACGACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000603218.1
ENST00000603323.5
ENST00000603852.5
ENST00000603870.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000605080.5
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000632179.1
ENST00000632969.1
ENST00000633642.1
CDS CAA 72 bp AGACTCACCACCTGCTGTAGTGCCTCCATGACAAACTaGTCACTGATGCGTAAGCATCCCAGAGCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: RLTTCCSASMTN*SLMRKHPRACA
Trigger: AGCACAGGCTCTGGGATGCTTACGCATCAGTGACAAGTTTGTCATGGAGGCACTACAGCAGGTGGTGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604400.5
ENST00000631424.1
CDS CAA 72 bp CTTTGCCCCCAATTAAAGACTGTCCTCCCAATCACCTaGTCTTTAGAGACAGCAGCCCAGGAGTTAAGAGCC +
Preference number: 6 (lower is better)
Translates to: LCPQLKTVLPIT*SLETAAQELRA
Trigger: GGCTCTTAACTCCTGGGCTGCTGTCTCTAAAGACAAGGTGATTGGGAGGACAGTCTTTAATTGGGGGCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000603323.5
ENST00000631921.1
CDS CCA 72 bp CAAATCTCTATCTGGTATCTTGTAGCCACTTGGCCCTaGGCAAGTCCCTTGGTCTCTCAGAGCTTTCATTTT +
Preference number: 6 (lower is better)
Translates to: QISIWYLVATWP*ASPLVSQSFHF
Trigger: AAAATGAAAGCTCTGAGAGACCAAGGGACTTGCCCAGGGCCAAGTGGCTACAAGATACCAGATAGAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604400.5
ENST00000631424.1
CDS CAA 90 bp GAGTTAGATGTTTGTTCAAATCTCTATCTGGTATCTTGTAGCCACTaGGCCCTGGGCAAGTCCCTTGGTCTCTCAGAGCTTTCATTTTCT +
Preference number: 6 (lower is better)
Translates to: ELDVCSNLYLVSCSH*ALGKSLGLSELSFS
Trigger: AGAAAATGAAAGCTCTGAGAGACCAAGGGACTTGCCCAGGGCCAAGTGGCTACAAGATACCAGATAGAGATTTGAACAAACATCTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604400.5
ENST00000631424.1
CDS CAA 72 bp AAGGGCCTGGATCGCATCTCAGATTTTATAGTCAGCTaGCTCATTGGGAGATGGAACATTTTGATGTGGGTT +
Preference number: 6 (lower is better)
Translates to: KGLDRISDFIVS*LIGRWNILMWV
Trigger: AACCCACATCAAAATGTTCCATCTCCCAATGAGCAAGCTGACTATAAAATCTGAGATGCGATCCAGGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000603323.5
ENST00000603852.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000633642.1
CDS CAA 90 bp GTTCTTTGGTCTTGTCTGGATATTCCAGCCATGGGTACAGGAACATaGACCTGGAGACATCAGAGATATCAGTTGATTTTTCATAGGCCA +
Preference number: 6 (lower is better)
Translates to: VLWSCLDIPAMGTGT*TWRHQRYQLIFHRP
Trigger: TGGCCTATGAAAAATCAACTGATATCTCTGATGTCTCCAGGTCAATGTTCCTGTACCCATGGCTGGAATATCCAGACAAGACCAAAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000603218.1
ENST00000603323.5
ENST00000603870.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000632969.1
CDS TCA 72 bp TTGCTCATTGGGAGATGGAACATTTTGATGTGGGTTTaGTGTACCTCTTTGATGTACCTACAGTCATCTCTC +
Preference number: 6 (lower is better)
Translates to: LLIGRWNILMWV*CTSLMYLQSSL
Trigger: GAGAGATGACTGTAGGTACATCAAAGAGGTACATCAAACCCACATCAAAATGTTCCATCTCCCAATGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000603323.5
ENST00000603852.5
ENST00000604400.5
ENST00000604834.6
ENST00000614305.2
ENST00000631424.1
ENST00000631921.1
ENST00000633642.1
CDS CCA 72 bp GGATCGCATCTCAGATTTTATAGTCAGCTTGCTCATTaGGAGATGGAACATTTTGATGTGGGTTTGATGTAC +
Preference number: 6 (lower is better)
Translates to: GSHLRFYSQLAH*EMEHFDVGLMY
Trigger: GTACATCAAACCCACATCAAAATGTTCCATCTCCCAATGAGCAAGCTGACTATAAAATCTGAGATGCGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000603323.5
ENST00000603852.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000633642.1
CDS CAA 72 bp TCTTGTCTGGATATTCCAGCCATGGGTACAGGAACATaGACCTGGAGACATCAGAGATATCAGTTGATTTTT +
Preference number: 6 (lower is better)
Translates to: SCLDIPAMGTGT*TWRHQRYQLIF
Trigger: AAAAATCAACTGATATCTCTGATGTCTCCAGGTCAATGTTCCTGTACCCATGGCTGGAATATCCAGACAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000603218.1
ENST00000603323.5
ENST00000603870.5
ENST00000604376.1
ENST00000604400.5
ENST00000604834.6
ENST00000614305.2
ENST00000631424.1
ENST00000631556.1
ENST00000631921.1
ENST00000632969.1
CDS CAA 72 bp CTTGCTCATTGGGAGATGGAACATTTTGATGTGGGTTaGATGTACCTCTTTGATGTACAGTCATCTCTCATT +
Preference number: 6 (lower is better)
Translates to: LAHWEMEHFDVG*MYLFDVQSSLI
Trigger: AATGAGAGATGACTGTACATCAAAGAGGTACATCAAACCCACATCAAAATGTTCCATCTCCCAATGAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604376.1
ENST00000631556.1
CDS TCA 72 bp TTGCTCATTGGGAGATGGAACATTTTGATGTGGGTTTaGTGTACCTCTTTGATGTACAGTCATCTCTCATTT +
Preference number: 6 (lower is better)
Translates to: LLIGRWNILMWV*CTSLMYSHLSF
Trigger: AAATGAGAGATGACTGTACATCAAAGAGGTACATCAAACCCACATCAAAATGTTCCATCTCCCAATGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604376.1
ENST00000631556.1
CDS CCA 72 bp ACAGCCAAAATGGTTCAATGGAAGGAACAATACAGTTaGGAGTTAGATGTTTGTTCAAATCTCTATCTGGTA +
Preference number: 6 (lower is better)
Translates to: TAKMVQWKEQYS*ELDVCSNLYLV
Trigger: TACCAGATAGAGATTTGAACAAACATCTAACTCCCAACTGTATTGTTCCTTCCATTGAACCATTTTGGCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604400.5
ENST00000631424.1