RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEATR6 (Homo sapiens)

Ensembl gene IDs: ENSG00000068097

Ensembl transcript IDs: ENST00000184956.11, ENST00000585712.1, ENST00000585976.5, ENST00000587003.5, ENST00000587314.1, ENST00000590587.1, ENST00000591074.1, ENST00000591683.1, ENST00000592664.1, ENST00000593097.5, ENST00000593228.5, ENST00000613428.4

Found 851 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGCCTGGATGCTGCCCATGTGTTTAAGGGCCATTCTGACCATCTaGTCTCTTTCCTGTGGGCTGTGGGGTGCTCCAGTGTCATCTCCC +
Preference number: 1 (lower is better)
Translates to: GAWMLPMCLRAILTI*SLSCGLWGAPVSSP
Trigger: GGGAGATGACACTGGAGCACCCCACAGCCCACAGGAAAGAGACCAGATGGTCAGAATGGCCCTTAAACACATGGGCAGCATCCAGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR CCA 90 bp TTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTaGGGAGGTGTGGCAGGGAAGGTGGTCAGGGGAACACGGGCACTC +
Preference number: 1 (lower is better)
Translates to: LEGPACWELTLVIGL*GGVAGKVVRGTRAL
Trigger: GAGTGCCCGTGTTCCCCTGACCACCTTCCCTGCCACACCTCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR TCA 90 bp CCAGAGAGGGTCCTGCAGGGGCTTTCTTCCACCAATCAGGAGGGCTaGGGTGAGGGGTTGCTGAATTGCTATTACCGAGTCCAGAAGAAC +
Preference number: 1 (lower is better)
Translates to: PERVLQGLSSTNQEG*GEGLLNCYYRVQKN
Trigger: GTTCTTCTGGACTCGGTAATAGCAATTCAGCAACCCCTCACCTCAGCCCTCCTGATTGGTGGAAGAAAGCCCCTGCAGGACCCTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp TCAATACCTGTAAGGCCTCCAGTCGCATGGGGGATGGTTCGTAGGTaGTTCCTGCTGCAGAGCCAGCATCGCTACCTGAACAGGAATCCT +
Preference number: 1 (lower is better)
Translates to: SIPVRPPVAWGMVRR*FLLQSQHRYLNRNP
Trigger: AGGATTCCTGTTCAGGTAGCGATGCTGGCTCTGCAGCAGGAAGCACCTACGAACCATCCCCCATGCGACTGGAGGCCTTACAGGTATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp AGGGCATCACAGGCGCTCGCCTGGAGAGTTGGGTGTTCTGAATTCTaGAGGGCTCTGGGTAAAGGACCGTTCAGCATCATAGTCCAGAAC +
Preference number: 1 (lower is better)
Translates to: RASQALAWRVGCSEF*RALGKGPFSIIVQN
Trigger: GTTCTGGACTATGATGCTGAACGGTCCTTTACCCAGAGCCCTGCAGAATTCAGAACACCCAACTCTCCAGGCGAGCGCCTGTGATGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp ACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTaGTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATG +
Preference number: 1 (lower is better)
Translates to: TNAFQIRAYWSTDPY*SLFPGTERAAADLM
Trigger: CATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR TCA 90 bp GGATGGTTCGTAGGTGCTTCCTGCTGCAGAGCCAGCATCGCTACCTaGACAGGAATCCTCCTTGGGCAGTACGACAATGGAAATGCAGAG +
Preference number: 1 (lower is better)
Translates to: GWFVGASCCRASIAT*TGILLGQYDNGNAE
Trigger: CTCTGCATTTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGCTCTGCAGCAGGAAGCACCTACGAACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR TCA 90 bp GGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGCATaGTGTCACGACCGATGTCAGGGCATTGTAGGCCTGGGAGGTCCA +
Preference number: 1 (lower is better)
Translates to: GKGSCRSDAHFEVLA*CHDRCQGIVGLGGP
Trigger: TGGACCTCCCAGGCCTACAATGCCCTGACATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR TCA 90 bp TCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTaGATCAGTGCCTGGCAGATTTGGGTCCGTAGGCTGACACAGTAC +
Preference number: 1 (lower is better)
Translates to: SFIQGRSEALAKLKR*ISAWQIWVRRLTQY
Trigger: GTACTGTGTCAGCCTACGGACCCAAATCTGCCAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR CCA 90 bp CTCTTCTGTAAAGCGGTGACCAATGCATTCCAGATCCGAGCATACTaGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAAAGG +
Preference number: 1 (lower is better)
Translates to: LFCKAVTNAFQIRAY*STDPYCSLFPGTER
Trigger: CCTTTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGCTTTACAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR CCA 90 bp CACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTaGCCAAGCTCAAGAGGTGAATCAGTGCCTGGCAGATTTGGGTCC +
Preference number: 1 (lower is better)
Translates to: HSVQGFLSYKGGPRH*PSSRGESVPGRFGS
Trigger: GGACCCAAATCTGCCAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR TCA 90 bp CAGATGAGTCAAAACAAACGGCCAGGATCTCTTCTAAAAAGCCCATaGTGGCCCTTCTGGCTGTGTCTCCAGTTGGTGCCTGGATGCTGC +
Preference number: 1 (lower is better)
Translates to: QMSQNKRPGSLLKSP*WPFWLCLQLVPGCC
Trigger: GCAGCATCCAGGCACCAACTGGAGACACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTTTGACTCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp CTGGATGCACAGGTCAGATGTTCCAACAACCCTGACCATGGCCAGTaGTATGGAGTCACTCCAAAGGTGGTTGAGCCCTCTGTGAAAATT +
Preference number: 1 (lower is better)
Translates to: LDAQVRCSNNPDHGQ*YGVTPKVVEPSVKI
Trigger: AATTTTCACAGAGGGCTCAACCACCTTTGGAGTGACTCCATAGCACTGGCCATGGTCAGGGTTGTTGGAACATCTGACCTGTGCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR GCA 90 bp CTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTaGAGCTTGCTAGAAATACAACTTGGTAACAACAGGAGATTGTGG +
Preference number: 1 (lower is better)
Translates to: LCSWARTNWLNCSSA*SLLEIQLGNNRRLW
Trigger: CCACAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR GCA 90 bp GGGGTTGCTGAATTGCTATTACCGAGTCCAGAAGAACATGGCTGTTaGAGAAGTAGTTGGACTTCAGGTAAAGGTGCGTGGGTGGACACT +
Preference number: 1 (lower is better)
Translates to: GVAELLLPSPEEHGC*RSSWTSGKGAWVDT
Trigger: AGTGTCCACCCACGCACCTTTACCTGAAGTCCAACTACTTCTGCAACAGCCATGTTCTTCTGGACTCGGTAATAGCAATTCAGCAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp GAAGCTTTGCTCCATGAAGCTGAATGGATGGATCTGCTTCCCCCATaGACTTGCAAATCACCTCTCCAAGCTCCATCAAGTAGGCTTGAG +
Preference number: 1 (lower is better)
Translates to: EALLHEAEWMDLLPP*TCKSPLQAPSSRLE
Trigger: CTCAAGCCTACTTGATGGAGCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAGCAGATCCATCCATTCAGCTTCATGGAGCAAAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp TGGGAGGTACTTTTGACATTTGGAGCCATTGCAGTACACCAGAGCTaGCAGGGCTTGAAGAATTTCCCTGTGTGTCCAGGAACTACACTG +
Preference number: 1 (lower is better)
Translates to: WEVLLTFGAIAVHQS*QGLKNFPVCPGTTL
Trigger: CAGTGTAGTTCCTGGACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTCAAAAGTACCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR CCA 90 bp AGTTGTCTTTATTGTCAGTGGCTTCCTTTCCCCACAGCAGCTTTATaGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGTCCTTTAGTG +
Preference number: 1 (lower is better)
Translates to: SCLYCQWLPFPTAAL*RHVPRHMRSFCPLV
Trigger: CACTAAAGGACAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAAAGCTGCTGTGGGGAAAGGAAGCCACTGACAATAAAGACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR CCA 90 bp GAACATGGCTGTTGCAGAAGTAGTTGGACTTCAGGTAAAGGTGCGTaGGTGGACACTATAGCTCCCAAGAGTGTGAGACTTGACACACGA +
Preference number: 1 (lower is better)
Translates to: EHGCCRSSWTSGKGA*VDTIAPKSVRLDTR
Trigger: TCGTGTGTCAAGTCTCACACTCTTGGGAGCTATAGTGTCCACCCACGCACCTTTACCTGAAGTCCAACTACTTCTGCAACAGCCATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp GTCTGTGAGGATGACTCCGCCACCAAAGCTAACAAAAGACATCTGTaGAACTCTCTAATGCTGCAAGCGATCATTACGGAGAAGGGGGTA +
Preference number: 1 (lower is better)
Translates to: VCEDDSATKANKRHL*NSLMLQAIITEKGV
Trigger: TACCCCCTTCTCCGTAATGATCGCTTGCAGCATTAGAGAGTTGCACAGATGTCTTTTGTTAGCTTTGGTGGCGGAGTCATCCTCACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp TTGCTCCATGAAGCTGAATGGATGGATCTGCTTCCCCCATGCACTTaGAAATCACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATTG +
Preference number: 1 (lower is better)
Translates to: LLHEAEWMDLLPPCT*KSPLQAPSSRLESL
Trigger: CAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAGCAGATCCATCCATTCAGCTTCATGGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp CAGTTCTTCCAGAAGCTTTGCTCCATGAAGCTGAATGGATGGATCTaGTTCCCCCATGCACTTGCAAATCACCTCTCCAAGCTCCATCAA +
Preference number: 1 (lower is better)
Translates to: QFFQKLCSMKLNGWI*FPHALANHLSKLHQ
Trigger: TTGATGGAGCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAGCAGATCCATCCATTCAGCTTCATGGAGCAAAGCTTCTGGAAGAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 90 bp GATCAGACTGAGCCAAGTCACTCAACTTCATTAAGAGTCCGGTGTTaGCTAGCAGCTCTGGGAGGTACTTTTGACATTTGGAGCCATTGC +
Preference number: 1 (lower is better)
Translates to: DQTEPSHSTSLRVRC*LAALGGTFDIWSHC
Trigger: GCAATGGCTCCAAATGTCAAAAGTACCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAATGAAGTTGAGTGACTTGGCTCAGTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR CCA 90 bp TTGCTATTACCGAGTCCAGAAGAACATGGCTGTTGCAGAAGTAGTTaGACTTCAGGTAAAGGTGCGTGGGTGGACACTATAGCTCCCAAG +
Preference number: 1 (lower is better)
Translates to: LLLPSPEEHGCCRSS*TSGKGAWVDTIAPK
Trigger: CTTGGGAGCTATAGTGTCCACCCACGCACCTTTACCTGAAGTCCAACTACTTCTGCAACAGCCATGTTCTTCTGGACTCGGTAATAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR TCA 90 bp TTTGCCATACAATGTACTGCAGCTCTCCTGACTTCAGGATCAGACTaGGCCAAGTCACTCAACTTCATTAAGAGTCCGGTGTTGCCTAGC +
Preference number: 1 (lower is better)
Translates to: FAIQCTAALLTSGSD*AKSLNFIKSPVLPS
Trigger: GCTAGGCAACACCGGACTCTTAATGAAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR GCA 90 bp GCAGAGAAGAGAATCAGCATACTGTTGGGACACAGCAGGTACCACTaGCTTCTGAAGTTTCTAGAGGTGCTATGCCTTCATTGTTTTCCT +
Preference number: 1 (lower is better)
Translates to: AEKRISILLGHSRYH*LLKFLEVLCLHCFP
Trigger: AGGAAAACAATGAAGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAACAGTATGCTGATTCTCTTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR GCA 90 bp AGGCATATGAGGAGCTTCTGTCCTTTAGTGTATGTACACCCACAATaGTGCAGAGAAGAGAATCAGCATACTGTTGGGACACAGCAGGTA +
Preference number: 1 (lower is better)
Translates to: RHMRSFCPLVYVHPQ*CREENQHTVGTQQV
Trigger: TACCTGCTGTGTCCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAAAGGACAGAAGCTCCTCATATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR CCA 90 bp GCTGATCGTAACATTTTCAAGAGCAGGAGACCAGAGAACTCTTCCTaGAAACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCT +
Preference number: 1 (lower is better)
Translates to: ADRNIFKSRRPENSS*KLGSGVSMLTIRVS
Trigger: AGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGTTCTCTGGTCTCCTGCTCTTGAAAATGTTACGATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CCA 90 bp GTTCCAAGATTCATCACAGGGTCAGGTGGGCTCAACTTAGTTTCCTaGGCCCTCTATAACACTTCATGTTCAGAATTGTCTCCAAATAAA +
Preference number: 1 (lower is better)
Translates to: VPRFITGSGGLNLVS*ALYNTSCSELSPNK
Trigger: TTTATTTGGAGACAATTCTGAACATGAAGTGTTATAGAGGGCCCAGGAAACTAAGTTGAGCCCACCTGACCCTGTGATGAATCTTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR TCA 90 bp TCTGAAGTTTCTAGAGGTGCTATGCCTTCATTGTTTTCCTGCACATaGACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGC +
Preference number: 1 (lower is better)
Translates to: SEVSRGAMPSLFSCT*TLTSTSGSGNLYRS
Trigger: GCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAGGAAAACAATGAAGGCATAGCACCTCTAGAAACTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR GCA 90 bp CCTGTGTGTCCAGGAACTACACTGATGAATAGCCGAAATAGTATATaGCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTAACA +
Preference number: 1 (lower is better)
Translates to: PVCPGTTLMNSRNSI*QQEIQVLFINNYLT
Trigger: TGTTAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGTTCCTGGACACACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR TCA 90 bp GGCGAATATAAGGCTTTATCTGGTTCCAGACTTTGGTCAGCAGGCTaGGTTTTAGACGATCATAAGGTGCATTTGATACTAAATTTGCAA +
Preference number: 1 (lower is better)
Translates to: GEYKALSGSRLWSAG*VLDDHKVHLILNLQ
Trigger: TTGCAAATTTAGTATCAAATGCACCTTATGATCGTCTAAAACTCAGCCTGCTGACCAAAGTCTGGAACCAGATAAAGCCTTATATTCGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR TCA 90 bp CACGGGCACTCCAGAAGCTCGGAGCAGCAGCTCATCAGCTGTGAGGCACCGTCACCAGGACAAACTGGCTaGACTGCAGCTCTGCTTGCA +
Preference number: 2 (lower is better)
Translates to: HGHSRSSEQQLISCEAPSPGQTG*TAALLA
Trigger: TGCAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGG...TGACGGTGCCTCACAGCTGATGAGCTGCTGCTCCGAGCTTCTGGAGTGCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR CAA 90 bp CTGGCAAGATGGAAGACAGGGCATCACAGGCGCTCGCCTGGAGAGTaGGGTGTTCTGAATTCTGCAGGGCTCTGGGTAAAGGACCGTTCA +
Preference number: 2 (lower is better)
Translates to: LARWKTGHHRRSPGE*GVLNSAGLWVKDRS
Trigger: TGAACGGTCCTTTACCCAGAGCCCTGCAGAATTCAGAACACCCAACTCTCCAGGCGAGCGCCTGTGATGCCCTGTCTTCCATCTTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 90 bp CTTCCTGCTGCAGAGCCAGCATCGCTACCTGAACAGGAATCCTCCTaGGGCAGTACGACAATGGAAATGCAGAGTCGAATGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LPAAEPASLPEQESS*GSTTMEMQSRMSQQ
Trigger: CTGCTGGCTCATTCGACTCTGCATTTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGCTCTGCAGCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CCA 90 bp GTTAACCCTGGGAGTGCCCCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGAGTGCCTGGCAGATTTaGGTCCGTAGGCTGACACAG +
Preference number: 2 (lower is better)
Translates to: VNPGSAPCDPDESKQTARSAWQI*VRRLTQ
Trigger: CTGTGTCAGCCTACGGACCCAAATCTGCCAGGCACT...CCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGGGGCACTCCCAGGGTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR TCA 90 bp TTGCCAGAAGAGTCAATACCTGTAAGGCCTCCAGTCGCATGGGGGATGGTTCGTGAGGTGAGGGGTTGCTaGATTGCTATTACCGAGTCC +
Preference number: 2 (lower is better)
Translates to: LPEESIPVRPPVAWGMVREVRGC*IAITES
Trigger: GGACTCGGTAATAGCAATTCAGCAACCCCTCACCTC...ACGAACCATCCCCCATGCGACTGGAGGCCTTACAGGTATTGACTCTTCTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp GCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCGATCTGCTTCCCCCATaGACTTGCAAATCACCTCTC +
Preference number: 2 (lower is better)
Translates to: AVTNAFQIRAYWSTDPYCDLLPP*TCKSPL
Trigger: GAGAGGTGATTTGCAAGTGCATGGGGGAAGCAGATC...GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 90 bp CTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTaGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTTG +
Preference number: 2 (lower is better)
Translates to: LGSGVSMLTIRVSVR*PRDQAALARTFRDL
Trigger: CAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
3UTR-3UTR CCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTCCATGGCCAGTGCTATaGAGTCACTCCAAAGGTGGT +
Preference number: 2 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPPWPVL*SHSKGG
Trigger: ACCACCTTTGGAGTGACTCCATAGCACTGGCCATGG...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGGTGTGGCAGGGAAGGTaGTCAGGGGAACACGGGCAC +
Preference number: 2 (lower is better)
Translates to: LVYVHPQCCREENQHTVGVWQGR*SGEHGH
Trigger: GTGCCCGTGTTCCCCTGACCACCTTCCCTGCCACAC...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR TCA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGCATTCGGCAGATTGCTaGAGGCCTCTGGCAAGATGG +
Preference number: 2 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPHSADC*RPLARW
Trigger: CCATCTTGCCAGAGGCCTTCAGCAATCTGCCGAATG...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR TCA 90 bp GTTAACCCTGGGAGTGCCCCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGTCTTCTGTAAAGCGGTaGCCAATGCATTCCAGATCC +
Preference number: 2 (lower is better)
Translates to: VNPGSAPCDPDESKQTARSSVKR*PMHSRS
Trigger: GGATCTGGAATGCATTGGTCACCGCTTTACAGAAGA...CCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGGGGCACTCCCAGGGTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp GTTAACCCTGGGAGTGCCCCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGATGGCAGATAAAACTTaGAGAGCACAGGCACGTGTC +
Preference number: 2 (lower is better)
Translates to: VNPGSAPCDPDESKQTARMADKT*RAQARV
Trigger: GACACGTGCCTGTGCTCTGCAAGTTTTATCTGCCAT...CCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGGGGCACTCCCAGGGTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp TTGCCAGAAGAGTCAATACCTGTAAGGCCTCCAGTCGCATGGGGGATGGTTCGTGAGGGGTTGCTGAATTaGTATTACCGAGTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: LPEESIPVRPPVAWGMVREGLLN*YYRVQK
Trigger: CTTCTGGACTCGGTAATAGCAATTCAGCAACCCCTC...ACGAACCATCCCCCATGCGACTGGAGGCCTTACAGGTATTGACTCTTCTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp GCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCGGGCCCGGACTGCATTaGTTTTTACCTTGTCTTTAT +
Preference number: 2 (lower is better)
Translates to: AVTNAFQIRAYWSTDPYCGPGLH*FLPCLY
Trigger: ATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCC...GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 90 bp AGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGCAGCTaGCTAGAAATACAACTTGGTAACAACAGGAGATTGTGGACACAC +
Preference number: 2 (lower is better)
Translates to: SWARTNWLNCSSACS*LEIQLGNNRRLWTH
Trigger: GTGTGTCCACAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR GCA 90 bp CCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGATCTCTTCTAAAAAGCCCTTCGTAGGTGCTTCCTaGTGCAGAGCCAGCATCGCT +
Preference number: 2 (lower is better)
Translates to: PCDPDESKQTARISSKKPFVGAS*CRASIA
Trigger: AGCGATGCTGGCTCTGCAGCAGGAAGCACCTACGAA...GGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp GCAGCTTTCACTAAGCGATTCTTGCTGTCATTCAGCCCGAGCAGCACTGTGATGGCTGTATTAAGCCTGTaGCCAGTTCTTCCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: AAFTKRFLLSFSPSSTVMAVLSL*PVLPEA
Trigger: AGCTTCTGGAAGAACTGGGCACAGGCTTAATACAGC...CATCACAGTGCTGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CCA 90 bp TTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGAGGTCAAAGCCCGTCTGCTTaGCCTGTATTACAACCTGAC +
Preference number: 2 (lower is better)
Translates to: LEGPACWELTLVIGLWGGQSPSA*PVLQPD
Trigger: GTCAGGTTGTAATACAGGCCAAGCAGACGGGCTTTG...ACCTCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CCA 90 bp GTGCTCTCTGATCAGGTGCTGCAGTGGAGTCTGGTTTATACTGCTGTATTAAGCTCAGGTAAAGGTGCGTaGGTGGACACTATAGCTCCC +
Preference number: 2 (lower is better)
Translates to: VLSDQVLQWSLVYTAVLSSGKGA*VDTIAP
Trigger: GGGAGCTATAGTGTCCACCCACGCACCTTTACCTGA...GCTTAATACAGCAGTATAAACCAGACTCCACTGCAGCACCTGATCAGAGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CCA 90 bp GTTAACCCTGGGAGTGCCCCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGTCCATCGGACTTTCATaGCAGCTTCTGTTAGAACAG +
Preference number: 2 (lower is better)
Translates to: VNPGSAPCDPDESKQTARSIGLS*QLLLEQ
Trigger: CTGTTCTAACAGAAGCTGCCATGAAAGTCCGATGGA...CCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGGGGCACTCCCAGGGTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 90 bp AGGTTGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTaGTCTTCAAGTGACATCAATATTGCATTTGCTGCGTCTGCAACA +
Preference number: 2 (lower is better)
Translates to: RLPRDQAALARTFRD*SSSDINIAFAASAT
Trigger: TGTTGCAGACGCAGCAAATGCAATATTGATGTCACTTGAAGACAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGTCCAAGGGCCCGGACTaGATTGCTTTTTACCTTGTC +
Preference number: 2 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPSKGPD*IAFYLV
Trigger: GACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGA...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp TCCAAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCTCAACAGACCCGTACTaGTCTCTCTTCCCCGGGACG +
Preference number: 2 (lower is better)
Translates to: SKKSMVSSLFCKAVTNAFSTDPY*SLFPGT
Trigger: CGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGA...GAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR-3UTR GCA 90 bp TACGGCTGTCCTGGCACACTGAGACATAAGTTTGCCATACAATGTACTGCAGCTGACATTTGGAGCCATTaGAGTACACCAGAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: YGCPGTLRHKFAIQCTAADIWSH*STPELP
Trigger: TGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTC...AGCTGCAGTACATTGTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGCCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR CAA 90 bp CTTTTGACATTTGGAGCCATTGCAGTACACCAGAGCTGCCAGGGCTaGAAGAATTTCCCTGTGTGTCCAGGAACTACACTGATGAATAGC +
Preference number: 2 (lower is better)
Translates to: LLTFGAIAVHQSCQG*KNFPVCPGTTLMNS
Trigger: GCTATTCATCAGTGTAGTTCCTGGACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR-3UTR TCA 90 bp CAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCCTTGGAAAATGCAGAGTCGAATaGGCCAGCAGGGCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: QISKGPDCIAFYLVFILGKCRVE*ASRALK
Trigger: CTTCAGAGCCCTGCTGGCTCATTCGACTCTGCATTT...TCCAAGGATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp CTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCCATCAATATTGCATTTaGTGCGTCTGCAACAAATAT +
Preference number: 2 (lower is better)
Translates to: LFPGTERAAADLMRTLKFHQYCI*CVCNKY
Trigger: ATATTTGTTGCAGACGCAGCAAATGCAATATTGATG...GAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTAGGGAACATTCAATATaGGTGTCTTTGCTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPREHSI*VSLLCL
Trigger: CAAGCACAGCAAAGACACCCATATTGAATGTTCCCT...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CCA 90 bp TTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAACAGGCACGTGTCTTTaGAGAAGGGTCTTTCAATGT +
Preference number: 2 (lower is better)
Translates to: FLSYKGGPRHWPSSRGESTGTCL*RRVFQC
Trigger: ACATTGAAAGACCCTTCTCCAAAGACACGTGCCTGT...TGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 90 bp ACTTGCAAATCACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATaGAAAAGTAGCCCCTTGCCAGAAGAGTCAATACCTGTAAGGCCT +
Preference number: 2 (lower is better)
Translates to: TCKSPLQAPSSRLES*KSSPLPEESIPVRP
Trigger: AGGCCTTACAGGTATTGACTCTTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTGATTTGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR TCA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGAAAGAAACTGCTTTaGGCCTTCCAAGATGGCAGA +
Preference number: 2 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPRKKLL*AFQDGR
Trigger: TCTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCT...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR GCA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGCCAATAAATCGTTGGTaGTCAGTAGAAAAATGCAAA +
Preference number: 2 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQPINRW*SVEKCK
Trigger: TTTGCATTTTTCTACTGAGCACCAACGATTTATTGG...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR GCA 90 bp ATGAAGCAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCCTTCCCCCATGCACTTaGAAATCACCTCTCCAAGCT +
Preference number: 2 (lower is better)
Translates to: MKQISKGPDCIAFYLVFILPPCT*KSPLQA
Trigger: AGCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAG...GATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTGCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CCA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGCATCACAGGGTCAGGTaGGCTCAACTTAGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLHHRVR*AQLSFL
Trigger: CAGGAAACTAAGTTGAGCCCACCTGACCCTGTGATG...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CCA 90 bp AAACAAACGGCCAGGATCTCTTCTAAAAAGCCCATGATGGCCCTTCTGGCTGTGGTAGAAATTAGGGCCTaGATAGACTCCTCAATGATT +
Preference number: 2 (lower is better)
Translates to: KQTARISSKKPMMALLAVVEIRA*IDSSMI
Trigger: AATCATTGAGGAGTCTATCCAGGCCCTAATTTCTAC...CACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR TCA 90 bp AAATGCCAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATGCCTGTATTACAACCTaGCTCCTCGGCTCCTGGATG +
Preference number: 2 (lower is better)
Translates to: KCQEATTKNVFKRRKFQDACITT*LLGSWM
Trigger: CATCCAGGAGCCGAGGAGTCAGGTTGTAATACAGGC...ATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR GCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGATCCCACAGATCTTATaGTCAAGCTCAGGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: LVYVHPQCCREENQHTVGIPQIL*SSSGLP
Trigger: AGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGAT...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTCATATATTTAGTGTGTaGGATCACATTCTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPHIFSV*DHILLK
Trigger: CTTTAGGAGAATGTGATCCCACACACTAAATATATG...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR TCA 90 bp CAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCCTTGGAATCAGGAATAAAAGCTaGCCAGTAGCCATAAAGAAC +
Preference number: 2 (lower is better)
Translates to: QISKGPDCIAFYLVFILGIRNKS*PVAIKN
Trigger: GTTCTTTATGGCTACTGGTCAGCTTTTATTCCTGAT...TCCAAGGATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CCA 90 bp ATGAAGCAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCTTGAGCCTTCCAAGATaGCAGATAAAACTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: MKQISKGPDCIAFYLVFILSLPR*QIKLAE
Trigger: CTCTGCAAGTTTTATCTGCCATCTTGGAAGGCTCAA...GATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTGCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR TCA 90 bp CAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTCATCATTTCTGCCCCTAAGATaGAATCCCACAGATCTTATG +
Preference number: 2 (lower is better)
Translates to: QEATTKNVFKRRKFQDSSFLPLR*NPTDLM
Trigger: CATAAGATCTGTGGGATTTCATCTTAGGGGCAGAAA...TGATGAATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR GCA 90 bp CCAGGAACTACACTGATGAATAGCCGAAATAGTATATGCCAACAGGAAATCCAATTTTATGGACATGTATaGTCACCTGAATCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: PGTTLMNSRNSICQQEIQFYGHV*SPESSC
Trigger: ACAGCTTGATTCAGGTGAGCATACATGTCCATAAAA...TTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGTTCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR TCA 72 bp CAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTaGATCAGTGCCTGGCAGATTTGGGTCCGTAGGCTG +
Preference number: 3 (lower is better)
Translates to: QGRSEALAKLKR*ISAWQIWVRRL
Trigger: CAGCCTACGGACCCAAATCTGCCAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR GCA 72 bp TTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTaGTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: FQIRAYWSTDPY*SLFPGTERAAA
Trigger: TGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR-3UTR CAA 90 bp GCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCCTGTCATTCGGCAGATaGCTGAAGGCCTCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: AVTNAFQIRAYWSTDPYCLSFGR*LKASGK
Trigger: CTTGCCAGAGGCCTTCAGCAATCTGCCGAATGACAG...GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 72 bp CAGGCGCTCGCCTGGAGAGTTGGGTGTTCTGAATTCTaGAGGGCTCTGGGTAAAGGACCGTTCAGCATCATA +
Preference number: 3 (lower is better)
Translates to: QALAWRVGCSEF*RALGKGPFSII
Trigger: TATGATGCTGAACGGTCCTTTACCCAGAGCCCTGCAGAATTCAGAACACCCAACTCTCCAGGCGAGCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CCA 72 bp AAAGCGGTGACCAATGCATTCCAGATCCGAGCATACTaGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGG +
Preference number: 3 (lower is better)
Translates to: KAVTNAFQIRAY*STDPYCSLFPG
Trigger: CCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR TCA 72 bp AGCGATTCTTGCTGTCATTCAGCCCGAGCAGCACTGTaGTGCACAGCATCTGCCTGTCATTCGGCAGATTGC +
Preference number: 3 (lower is better)
Translates to: SDSCCHSARAAL*CTASACHSADC
Trigger: GCAATCTGCCGAATGACAGGCAGATGCTGTGCATCACAGTGCTGCTCGGGCTGAATGACAGCAAGAATCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 72 bp CAGGTCAGATGTTCCAACAACCCTGACCATGGCCAGTaGTATGGAGTCACTCCAAAGGTGGTTGAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: QVRCSNNPDHGQ*YGVTPKVVEPS
Trigger: AGAGGGCTCAACCACCTTTGGAGTGACTCCATAGCACTGGCCATGGTCAGGGTTGTTGGAACATCTGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CAA 90 bp CTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCAGTAGGCTTGAGTCATaGAAAAGTAGCCCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: LFPGTERAAADLMRTLKFSRLES*KSSPLP
Trigger: TGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACT...GAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp AGACTCCCAGGGCCCGTGAAGTTGCAGCTTTCACTAAGCGATTCTTGCTGTCATGAACAGGAATCCTCCTaGGGCAGTACGACAATGGAA +
Preference number: 3 (lower is better)
Translates to: RLPGPVKLQLSLSDSCCHEQESS*GSTTME
Trigger: TTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTTC...ATGACAGCAAGAATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGGGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR TCA 72 bp AGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGCATaGTGTCACGACCGATGTCAGGGCATTGTAGGCCTG +
Preference number: 3 (lower is better)
Translates to: SCRSDAHFEVLA*CHDRCQGIVGL
Trigger: CAGGCCTACAATGCCCTGACATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAGATCTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR CCA 72 bp TTTTCTGAGACTAAATGCCCTCAAAGCCCGTCTGCTTaGCCTGTATTACAACCTGACTCCTCGGCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: FSETKCPQSPSA*PVLQPDSSAPG
Trigger: TCCAGGAGCCGAGGAGTCAGGTTGTAATACAGGCCAAGCAGACGGGCTTTGAGGGCATTTAGTCTCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CAA 90 bp CCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACCACAGGCACGTGTCTTaGGAGAAGGGTCTTTCAATG +
Preference number: 3 (lower is better)
Translates to: PYSHSVQGFLSYKGGPRHHRHVS*EKGLSM
Trigger: CATTGAAAGACCCTTCTCCAAAGACACGTGCCTGTG...GTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp CTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCACCTTGTCTTTATCCTaGGATGCTTCTATAGCTGAT +
Preference number: 3 (lower is better)
Translates to: LFPGTERAAADLMRTLKFTLSLS*DASIAD
Trigger: ATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGT...GAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp ATGTACTGCAGCTCTCCTGACTTCAGGATCAGACTGAGCCAAGTCACTCAACTTCAGAGCTGCCAGGGCTaGAAGAATTTCCCTGTGTGT +
Preference number: 3 (lower is better)
Translates to: MYCSSPDFRIRLSQVTQLQSCQG*KNFPVC
Trigger: ACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTG...AAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR GCA 72 bp CCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTaGCGCCTTCGACATCTAGAAAGTATGGTGGGATCT +
Preference number: 3 (lower is better)
Translates to: PTDLMLKLRSSY*RLRHLESMVGS
Trigger: AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR GCA 72 bp TGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTaGAGCTTGCTAGAAATACAACTTGGTAACAACAGG +
Preference number: 3 (lower is better)
Translates to: WARTNWLNCSSA*SLLEIQLGNNR
Trigger: CCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR GCA 72 bp CAGAAGCTTTGCTCCATGAAGCTGAATGGATGGATCTaGTTCCCCCATGCACTTGCAAATCACCTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: QKLCSMKLNGWI*FPHALANHLSK
Trigger: CTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAGCAGATCCATCCATTCAGCTTCATGGAGCAAAGCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CCA 72 bp CCGAGTCCAGAAGAACATGGCTGTTGCAGAAGTAGTTaGACTTCAGGTAAAGGTGCGTGGGTGGACACTATA +
Preference number: 3 (lower is better)
Translates to: PSPEEHGCCRSS*TSGKGAWVDTI
Trigger: TATAGTGTCCACCCACGCACCTTTACCTGAAGTCCAACTACTTCTGCAACAGCCATGTTCTTCTGGACTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CCA 72 bp CCAAGAAGACTGGTGCTCTCTGATCAGGTGCTGCAGTaGAGTCTGGTTTATACTGCTGTATTAAGCCTGTGC +
Preference number: 3 (lower is better)
Translates to: PRRLVLSDQVLQ*SLVYTAVLSLC
Trigger: GCACAGGCTTAATACAGCAGTATAAACCAGACTCCACTGCAGCACCTGATCAGAGAGCACCAGTCTTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTGAGCCTTTAGTGAACTaGAATACCCTGTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPEPLVN*NTLFPN
Trigger: ATTGGGGAACAGGGTATTCAAGTTCACTAAAGGCTC...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CAA 90 bp AAACAAACGGCCAGGATCTCTTCTAAAAAGCCCATGATGGCCCTTCTGGCTGTGCAGAAAGAAACTGCTTaGAGCCTTCCAAGATGGCAG +
Preference number: 3 (lower is better)
Translates to: KQTARISSKKPMMALLAVQKETA*SLPRWQ
Trigger: CTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCTG...CACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp AAACAAACGGCCAGGATCTCTTCTAAAAAGCCCATGATGGCCCTTCTGGCTGTGGTTCTTCCAGAAGCTTaGCTCCATGAAGCTGAATGG +
Preference number: 3 (lower is better)
Translates to: KQTARISSKKPMMALLAVVLPEA*LHEAEW
Trigger: CCATTCAGCTTCATGGAGCAAAGCTTCTGGAAGAAC...CACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR TCA 72 bp CACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATTaGAAAGTAGCCCCTTGCCAGAAGAGTCAATACCTG +
Preference number: 3 (lower is better)
Translates to: HLSKLHQVGLSH*KVAPCQKSQYL
Trigger: CAGGTATTGACTCTTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR TCA 72 bp CAATGTACTGCAGCTCTCCTGACTTCAGGATCAGACTaGGCCAAGTCACTCAACTTCATTAAGAGTCCGGTG +
Preference number: 3 (lower is better)
Translates to: QCTAALLTSGSD*AKSLNFIKSPV
Trigger: CACCGGACTCTTAATGAAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTACATTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR CCA 72 bp TGTTGCAGAAGTAGTTGGACTTCAGGTAAAGGTGCGTaGGTGGACACTATAGCTCCCAAGAGTGTGAGACTT +
Preference number: 3 (lower is better)
Translates to: CCRSSWTSGKGA*VDTIAPKSVRL
Trigger: AAGTCTCACACTCTTGGGAGCTATAGTGTCCACCCACGCACCTTTACCTGAAGTCCAACTACTTCTGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CCA 72 bp CAAGAGCAGGAGACCAGAGAACTCTTCCTGGAAACTTaGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTC +
Preference number: 3 (lower is better)
Translates to: QEQETRELFLET*VWCFHVDNQSV
Trigger: GACACTCTGATTGTCAACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGTTCTCTGGTCTCCTGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp CTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAAAGTAGCCCCTTGCCAGAAATCTGGTTCCAGACTTaGGTCAGCAGGCTGAGTTTT +
Preference number: 3 (lower is better)
Translates to: LQAPSSRLESLKSSPLPEIWFQT*VSRLSF
Trigger: AAAACTCAGCCTGCTGACCAAAGTCTGGAACCAGAT...TTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGCGCACTTTGAAGTTCTaGCATGATGTCACGACCGAT +
Preference number: 3 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPRTLKF*HDVTTD
Trigger: ATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCG...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR GCA 72 bp AGAATCAGCATACTGTTGGGACACAGCAGGTACCACTaGCTTCTGAAGTTTCTAGAGGTGCTATGCCTTCAT +
Preference number: 3 (lower is better)
Translates to: RISILLGHSRYH*LLKFLEVLCLH
Trigger: ATGAAGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAACAGTATGCTGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR GCA 72 bp GATGACTCCGCCACCAAAGCTAACAAAAGACATCTGTaGAACTCTCTAATGCTGCAAGCGATCATTACGGAG +
Preference number: 3 (lower is better)
Translates to: DDSATKANKRHL*NSLMLQAIITE
Trigger: CTCCGTAATGATCGCTTGCAGCATTAGAGAGTTGCACAGATGTCTTTTGTTAGCTTTGGTGGCGGAGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 72 bp GAATTGCTATTACCGAGTCCAGAAGAACATGGCTGTTaGAGAAGTAGTTGGACTTCAGGTAAAGGTGCGTGG +
Preference number: 3 (lower is better)
Translates to: ELLLPSPEEHGC*RSSWTSGKGAW
Trigger: CCACGCACCTTTACCTGAAGTCCAACTACTTCTGCAACAGCCATGTTCTTCTGGACTCGGTAATAGCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp GCATTGCTTTTTACCTTGTCTTTATCCTTGGATGCTTCTATAGCTGATCGTAACCCAGGGCCCGTGAAGTaGCAGCTTTCACTAAGCGAT +
Preference number: 3 (lower is better)
Translates to: ALLFTLSLSLDASIADRNPGPVK*QLSLSD
Trigger: ATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGG...GTTACGATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp ACTACACTGATGAATAGCCGAAATAGTATATGCCAACAGGAAATCCAAGTGCTGCCCCACCCCAAGGTCTaGCTCACTTCTTCCTCTTTA +
Preference number: 3 (lower is better)
Translates to: TTLMNSRNSICQQEIQVLPHPKV*LTSSSL
Trigger: TAAAGAGGAAGAAGTGAGCAAGACCTTGGGGTGGGG...CAGCACTTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR TCA 72 bp GACATAAGTTTGCCATACAATGTACTGCAGCTCTCCTaGCTTCAGGATCAGACTGAGCCAAGTCACTCAACT +
Preference number: 3 (lower is better)
Translates to: DISLPYNVLQLS*LQDQTEPSHST
Trigger: AGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCAAACTTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
3UTR GCA 72 bp AGGAGCTTCTGTCCTTTAGTGTATGTACACCCACAATaGTGCAGAGAAGAGAATCAGCATACTGTTGGGACA +
Preference number: 3 (lower is better)
Translates to: RSFCPLVYVHPQ*CREENQHTVGT
Trigger: TGTCCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAAAGGACAGAAGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR-3UTR CAA 90 bp CCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTGAATCAAGCTGTATACCCCACCCCAAGGTCTaGCTCACTTCTTCCTCTTTA +
Preference number: 3 (lower is better)
Translates to: PTGNPSAVHQQLPESSCIPHPKV*LTSSSL
Trigger: TAAAGAGGAAGAAGTGAGCAAGACCTTGGGGTGGGG...TATACAGCTTGATTCAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592664.1
3UTR-3UTR CAA 90 bp ATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTGAATCAAGCTGTAAAGGGCCTGAAAGTTaGATCAACGTAGGGGCCTTC +
Preference number: 3 (lower is better)
Translates to: MPTGNPSAVHQQLPESSCKGPES*INVGAF
Trigger: GAAGGCCCCTACGTTGATCAAACTTTCAGGCCCTTT...ACAGCTTGATTCAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
3UTR TCA 72 bp GTGGGTGGACACTATAGCTCCCAAGAGTGTGAGACTTaGCACACGAACATTAACATCTTTGTGGCGAATATA +
Preference number: 3 (lower is better)
Translates to: VGGHYSSQECET*HTNINIFVANI
Trigger: TATATTCGCCACAAAGATGTTAATGTTCGTGTGTCAAGTCTCACACTCTTGGGAGCTATAGTGTCCACCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR TCA 72 bp AAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTaGCCAATGCATTCCAGATCCGAGCATACTGGTCAA +
Preference number: 3 (lower is better)
Translates to: KSLWCLHSSVKR*PMHSRSEHTGQ
Trigger: TTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR CCA 72 bp AACATTTTCAAGAGCAGGAGACCAGAGAACTCTTCCTaGAAACTTGGGTCTGGTGTTTCCATGTTGACAATC +
Preference number: 3 (lower is better)
Translates to: NIFKSRRPENSS*KLGSGVSMLTI
Trigger: GATTGTCAACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGTTCTCTGGTCTCCTGCTCTTGAAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp TCCAAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCTTGAAAAGTAGCCCCTaGCCAGAAGAGTCAATACCT +
Preference number: 3 (lower is better)
Translates to: SKKSMVSSLFCKAVTNAFLKSSP*PEESIP
Trigger: AGGTATTGACTCTTCTGGCAAGGGGCTACTTTTCAA...GAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR-3UTR CAA 90 bp TTCTGCAAATGTGGGTTTTTCTATATGAGAGGGTTGCAGAAAATGAAGCAAATTGCTTCCCCCATGCACTaGCAAATCACCTCTCCAAGC +
Preference number: 3 (lower is better)
Translates to: FCKCGFFYMRGLQKMKQIASPMH*QITSPS
Trigger: GCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAGC...AATTTGCTTCATTTTCTGCAACCCTCTCATATAGAAAAACCCACATTTGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CCA 72 bp ATGGCAGCTTCTGTTAGAACAGTAGAAATTAGGGCCTaGATAGACTCCTCAATGATTTCTGCAAATGTGGGT +
Preference number: 3 (lower is better)
Translates to: MAASVRTVEIRA*IDSSMISANVG
Trigger: ACCCACATTTGCAGAAATCATTGAGGAGTCTATCCAGGCCCTAATTTCTACTGTTCTAACAGAAGCTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR TCA 72 bp TCTAGAGGTGCTATGCCTTCATTGTTTTCCTGCACATaGACATTAACATCCACATCAGGATCTGGAAACCTT +
Preference number: 3 (lower is better)
Translates to: SRGAMPSLFSCT*TLTSTSGSGNL
Trigger: AAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAGGAAAACAATGAAGGCATAGCACCTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR TCA 72 bp AAGGCTTTATCTGGTTCCAGACTTTGGTCAGCAGGCTaGGTTTTAGACGATCATAAGGTGCATTTGATACTA +
Preference number: 3 (lower is better)
Translates to: KALSGSRLWSAG*VLDDHKVHLIL
Trigger: TAGTATCAAATGCACCTTATGATCGTCTAAAACTCAGCCTGCTGACCAAAGTCTGGAACCAGATAAAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR GCA 72 bp CCAGGAACTACACTGATGAATAGCCGAAATAGTATATaGCAACAGGAAATCCAAGTGCTGTTCATCAACAAT +
Preference number: 3 (lower is better)
Translates to: PGTTLMNSRNSI*QQEIQVLFINN
Trigger: ATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGTTCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR GCA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGCGGTGCGGGCGGAGCTaGTGTCATCCGGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLRCGRS*CHPGAG
Trigger: CCCTGCGCCCGGATGACAGCAGCTCCGCCCGCACCG...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCGGTGCGGGCGGAGCTaGTGTCATCCGGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGRCGRS*CHPGAG
Trigger: CCCTGCGCCCGGATGACAGCAGCTCCGCCCGCACCG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAACCGGGGCCACGCCACTaGCCTCGCTGTAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LSLPRDGKGSCRSDAHFEPGPRH*PRCSSR
Trigger: CCGAGAACTACAGCGAGGGCAGTGGCGTGGCCCCGG...TTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp CACGGGCACTCCAGAAGCTCGGAGCAGCAGCTCATCAGCTGTGAGGCACCGTCAAGGCCTCCAGTCGCATaGGGGATGGTTCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: HGHSRSSEQQLISCEAPSRPPVA*GMVRRC
Trigger: GCACCTACGAACCATCCCCCATGCGACTGGAGGCCT...TGACGGTGCCTCACAGCTGATGAGCTGCTGCTCCGAGCTTCTGGAGTGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp GTACTGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACCTGTGGGCTGTGGGGTaGTCCAGTGTCATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VLLSLPRDGKGSCRSDAHLWAVG*SSVISL
Trigger: GAGGGAGATGACACTGGAGCACCCCACAGCCCACAG...GTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp GGCAGGGAAGGTGGTCAGGGGAACACGGGCACTCCAGAAGCTCGGAGCAGCAGCGGGACCAGGCTGCTTTaGCTCGAACATTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: GREGGQGNTGTPEARSSSGTRLL*LEHSET
Trigger: AGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCC...GCTGCTGCTCCGAGCTTCTGGAGTGCCCGTGTTCCCCTGACCACCTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCGGTGCGGGCGGAGCTaGTGTCATCCGGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSRCGRS*CHPGAG
Trigger: CCCTGCGCCCGGATGACAGCAGCTCCGCCCGCACCG...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GGCAGGGAAGGTGGTCAGGGGAACACGGGCACTCCAGAAGCTCGGAGCAGCAGCACAAACTGGCTGAACTaGAGCTCTGCTTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GREGGQGNTGTPEARSSSTNWLN*SSACSL
Trigger: CAAGCTGCAAGCAGAGCTGCAGTTCAGCCAGTTTGT...GCTGCTGCTCCGAGCTTCTGGAGTGCCCGTGTTCCCCTGACCACCTTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGTGCCTGGCAGGGCGCAGAGCCTaGCAGACAAGAGGCGAAACC +
Preference number: 4 (lower is better)
Translates to: HTREVRGTGQAQEVNQCLAGRRA*QTRGET
Trigger: GGTTTCGCCTCTTGTCTGCCAGGCTCTGCGCCCTGC...CAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGGTGCCTCCCGCGGCTaGACGGAAGGCCACGAACCG +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSGASRG*TEGHEP
Trigger: CGGTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACC...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGGTGCCTCCCGCGGCTaGACGGAAGGCCACGAACCG +
Preference number: 4 (lower is better)
Translates to: FLSYKGGPRHWPSSRGESGASRG*TEGHEP
Trigger: CGGTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACC...TGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGCGGTGCGGGCGGAGCTaGTGTCATCCGGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPRCGRS*CHPGAG
Trigger: CCCTGCGCCCGGATGACAGCAGCTCCGCCCGCACCG...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCCTGTGGGCTGTGGGGTaGTCCAGTGTCATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LFPGTERAAADLMRTLKFLWAVG*SSVISL
Trigger: GAGGGAGATGACACTGGAGCACCCCACAGCCCACAG...GAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp CACGGGCACTCCAGAAGCTCGGAGCAGCAGCTCATCAGCTGTGAGGCACCGTCAACCAGTCGGCAAGCCTaGACAAGAAGAGCACTAACG +
Preference number: 4 (lower is better)
Translates to: HGHSRSSEQQLISCEAPSTSRQA*TRRALT
Trigger: CGTTAGTGCTCTTCTTGTCCAGGCTTGCCGACTGGT...TGACGGTGCCTCACAGCTGATGAGCTGCTGCTCCGAGCTTCTGGAGTGCCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGCAGTCGCATGGGGGATaGTTCGTAGGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CSLFPGTERAAADLMRTLQSHGG*FVGASC
Trigger: GCAGGAAGCACCTACGAACCATCCCCCATGCGACTG...CAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp GATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAGGAGGTCCGAGGCACTaGCCAAGCTCAAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: DPSILVNRPVLLSLPRDGGGPRH*PSSRGE
Trigger: TTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCC...TCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGGTGCCTCCCGCGGCTaGACGGAAGGCCACGAACCG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEGASRG*TEGHEP
Trigger: CGGTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACC...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GAGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTCGGTGCGGGCGGAGCTaGTGTCATCCGGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ERVCVCRLCVKRITSKGPRCGRS*CHPGAG
Trigger: CCCTGCGCCCGGATGACAGCAGCTCCGCCCGCACCG...AGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGGCAGGTGGATCTCGGTaGGGGCGGAGCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGAGGSR*GRSCCH
Trigger: ATGACAGCAGCTCCGCCCGCACCGAGATCCACCTGC...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGTTCGTAGGTGCTTCCTaGTGCAGAGCCAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLFVGAS*CRASIA
Trigger: AGCGATGCTGGCTCTGCAGCAGGAAGCACCTACGAA...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGTTCGTAGGTGCTTCCTaGTGCAGAGCCAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: CSLFPGTERAAADLMRTLFVGAS*CRASIA
Trigger: AGCGATGCTGGCTCTGCAGCAGGAAGCACCTACGAA...CAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp GTACTGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACCAAGAGGTGAATCAGTaGCTGGCAGATTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: VLLSLPRDGKGSCRSDAHQEVNQ*LADLGP
Trigger: CGGACCCAAATCTGCCAGGCACTGATTCACCTCTTG...GTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp CTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGGAGGTCCGAGGCACTaGCCAAGCTCAAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LSLPRDGKGSCRSDAHFEGGPRH*PSSRGE
Trigger: TTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCC...TTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp CACGGGCACTCCAGAAGCTCGGAGCAGCAGCTCATCAGCTGTGAGGCACCGTCACAAAGCCCGTCTGCTTaGCCTGTATTACAACCTGAC +
Preference number: 4 (lower is better)
Translates to: HGHSRSSEQQLISCEAPSQSPSA*PVLQPD
Trigger: GTCAGGTTGTAATACAGGCCAAGCAGACGGGCTTTG...TGACGGTGCCTCACAGCTGATGAGCTGCTGCTCCGAGCTTCTGGAGTGCCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGCGCATCCTGTGCAGCTaGGCCAGGACAAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQRILCS*ARTNWL
Trigger: CAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCG...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GCAGAGCCAGCATCGCTACCTGAACAGGAATCCTCCTTGGGCAGTACGACAATGCTCTGCCTGTGCCAGTaGCTGGGGCTGCCTCTATTT +
Preference number: 4 (lower is better)
Translates to: AEPASLPEQESSLGSTTMLCLCQ*LGLPLF
Trigger: AAATAGAGGCAGCCCCAGTCACTGGCACAGGCAGAG...CATTGTCGTACTGCCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGGAGGTGAGGGGTTGCTaGATTGCTATTACCGAGTCC +
Preference number: 4 (lower is better)
Translates to: CSLFPGTERAAADLMRTLEVRGC*IAITES
Trigger: GGACTCGGTAATAGCAATTCAGCAACCCCTCACCTC...CAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACGCCCGAGCAGCACTGTaGTGCACAGCATCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDARAAL*CTASAC
Trigger: ACAGGCAGATGCTGTGCATCACAGTGCTGCTCGGGC...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR TCA 90 bp GTACTGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACCTTCTAAAAAGCCCATaGTGGCCCTTCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLLSLPRDGKGSCRSDAHLLKSP*WPFWLC
Trigger: ACACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAG...GTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCCTCCCGCGGCTaGACGGAAGGCCACGAACCG +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYGASRG*TEGHEP
Trigger: CGGTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGGGTGCCTCCCGCGGCTaGACGGAAGGCCACGAACCG +
Preference number: 4 (lower is better)
Translates to: RECVSVVYVSKGSPLKGLGASRG*TEGHEP
Trigger: CGGTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACC...CAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR GCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGATTGCTTCCCGCGGTaGCTCCCGCGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGDCFPR*LPRLHG
Trigger: TCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATC...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGGATTGCTTCCCGCGGTaGCTCCCGCGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: IFPLSSRVSFIQGRSEALDCFPR*LPRLHG
Trigger: TCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATC...CAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGATTGCTTCCCGCGGTaGCTCCCGCGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKDCFPR*LPRLHG
Trigger: TCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATC...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCCGGGGCCACGCCACTaGCCTCGCTGTAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKPGPRH*PRCSSR
Trigger: CCGAGAACTACAGCGAGGGCAGTGGCGTGGCCCCGG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAACCGGGGCCACGCCACTaGCCTCGCTGTAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEPGPRH*PRCSSR
Trigger: CCGAGAACTACAGCGAGGGCAGTGGCGTGGCCCCGG...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGTTAAGAGTCCGGTGTTaGCTAGCAGCTCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLLRVRC*LAALGG
Trigger: ACCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAA...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCTGTGGGCTGTGGGGTaGTCCAGTGTCATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGLWAVG*SSVISL
Trigger: GAGGGAGATGACACTGGAGCACCCCACAGCCCACAG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGCAGGGCGCAGAGCCTaGCAGACAAGAGGCGAAACC +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGAGRRA*QTRGET
Trigger: GGTTTCGCCTCTTGTCTGCCAGGCTCTGCGCCCTGC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAACCAGTCGGCAAGCCTaGACAAGAAGAGCACTAACG +
Preference number: 4 (lower is better)
Translates to: DPSILVNRPVLLSLPRDGTSRQA*TRRALT
Trigger: CGTTAGTGCTCTTCTTGTCCAGGCTTGCCGACTGGT...TCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TTTCCCCACAGCAGCTTTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGCAGTCGCATGGGGGATaGTTCGTAGGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FPHSSFMEARAQAYEELLQSHGG*FVGASC
Trigger: GCAGGAAGCACCTACGAACCATCCCCCATGCGACTG...CAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAAAGCTGCTGTGGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGTGCCTGAGGCCTCTGGCAAGATaGAAGACAGGGCATCACAGG +
Preference number: 4 (lower is better)
Translates to: HTREVRGTGQAQEVNQCLRPLAR*KTGHHR
Trigger: CCTGTGATGCCCTGTCTTCCATCTTGCCAGAGGCCT...CAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp CATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGTGCCTGAGTGCCTGGCAGATTTaGGTCCGTAGGCTGACACAG +
Preference number: 4 (lower is better)
Translates to: HTREVRGTGQAQEVNQCLSAWQI*VRRLTQ
Trigger: CTGTGTCAGCCTACGGACCCAAATCTGCCAGGCACT...CAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGCTGGTCTCTTTCCTGTaGGCTGTGGGGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQLVSFL*AVGCSS
Trigger: ACTGGAGCACCCCACAGCCCACAGGAAAGAGACCAG...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR CAA 72 bp TGGAAGACAGGGCATCACAGGCGCTCGCCTGGAGAGTaGGGTGTTCTGAATTCTGCAGGGCTCTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: WKTGHHRRSPGE*GVLNSAGLWVK
Trigger: CTTTACCCAGAGCCCTGCAGAATTCAGAACACCCAACTCTCCAGGCGAGCGCCTGTGATGCCCTGTCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp GCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCACCAATCAGGAGGGCTaGGGTGAGGGGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: AVTNAFQIRAYWSTDPYCTNQEG*GEGLLN
Trigger: ATTCAGCAACCCCTCACCTCAGCCCTCCTGATTGGT...GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGGCCAGCATCGCTACCTaGACAGGAATCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGASIAT*TGILLG
Trigger: CCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGC...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGCATTCGGCAGATTGCTaGAGGCCTCTGGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQHSADC*RPLARW
Trigger: CCATCTTGCCAGAGGCCTTCAGCAATCTGCCGAATG...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGCCCGAGCAGCACTGTaGTGCACAGCATCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGARAAL*CTASAC
Trigger: ACAGGCAGATGCTGTGCATCACAGTGCTGCTCGGGC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGCTTCTAAAAAGCCCATaGTGGCCCTTCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLLLKSP*WPFWLC
Trigger: ACACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAG...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp CTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCCACCAAGAAGACTGGTaGTCTCTGATCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LFPGTERAAADLMRTLKFHQEDW*SLIRCC
Trigger: GCAGCACCTGATCAGAGAGCACCAGTCTTCTTGGTG...GAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGGACGGAAAGGGCAGCTaGAGATCTGATGCGCACTTT +
Preference number: 4 (lower is better)
Translates to: FQIRAYWSTDPYCSLFPGDGKGS*RSDAHF
Trigger: AAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTC...CCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAGCAGGGCGCAGAGCCTaGCAGACAAGAGGCGAAACC +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRAGRRA*QTRGET
Trigger: GGTTTCGCCTCTTGTCTGCCAGGCTCTGCGCCCTGC...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGTGCCTGTCAGGTAAAGGTGCGTaGGTGGACACTATAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HTREVRGTGQAQEVNQCLSGKGA*VDTIAP
Trigger: GGGAGCTATAGTGTCCACCCACGCACCTTTACCTGA...CAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TGTAAAGCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGAGGCCTCCAGTCGCATaGGGGATGGTTCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: CKAVTNAFQIRAYWSTDPRPPVA*GMVRRC
Trigger: GCACCTACGAACCATCCCCCATGCGACTGGAGGCCT...CGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGCTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGCACCACCAAGAAGACTaGTGCTCTCTGATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FQIRAYWSTDPYCSLFPGHHQED*CSLIRC
Trigger: GCACCTGATCAGAGAGCACCAGTCTTCTTGGTGGTG...CCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TTTCCCCACAGCAGCTTTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGTCACAGGCGCTCGCCTaGAGAGTTGGGTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FPHSSFMEARAQAYEELLSQALA*RVGCSE
Trigger: TTCAGAACACCCAACTCTCCAGGCGAGCGCCTGTGA...CAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAAAGCTGCTGTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TCTGTCAGGTTGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTTGTCACAGGCGCTCGCCTaGAGAGTTGGGTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SVRLPRDQAALARTFRDLSQALA*RVGCSE
Trigger: TTCAGAACACCCAACTCTCCAGGCGAGCGCCTGTGA...CAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CCA 90 bp CTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCATTGCTGAAGGCCTCTaGCAAGATGGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: LFPGTERAAADLMRTLKFIAEGL*QDGRQG
Trigger: GCCCTGTCTTCCATCTTGCCAGAGGCCTTCAGCAAT...GAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGCAGATCCGAGCATACTaGTCAACAGACCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: FQIRAYWSTDPYCSLFPGQIRAY*STDPYC
Trigger: GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTG...CCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp TTTCCCCACAGCAGCTTTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGAGTGCCTGGCAGATTTaGGTCCGTAGGCTGACACAG +
Preference number: 4 (lower is better)
Translates to: FPHSSFMEARAQAYEELLSAWQI*VRRLTQ
Trigger: CTGTGTCAGCCTACGGACCCAAATCTGCCAGGCACT...CAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAAAGCTGCTGTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp TTTCCCCACAGCAGCTTTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGTTCTCGGAGATGAGCTaGTCGAAGAGCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: FPHSSFMEARAQAYEELLFSEMS*SKSRWI
Trigger: GATCCACCTGCTCTTCGATCAGCTCATCTCCGAGAA...CAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAAAGCTGCTGTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAAAGGGACTTCAGGATCAGACTaGGCCAAGTCACTCAACTTC +
Preference number: 4 (lower is better)
Translates to: EHTGQQTRTALSSPGRKGTSGSD*AKSLNF
Trigger: GAAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGT...CCCTTTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp GCAGAGCCAGCATCGCTACCTGAACAGGAATCCTCCTTGGGCAGTACGACAATGGTACTGCAGCTCTCCTaGCTTCAGGATCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: AEPASLPEQESSLGSTTMVLQLS*LQDQTE
Trigger: CTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTAC...CATTGTCGTACTGCCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CCTGTATTACAACCTGACTCCTCGGCTCCTGGATGCACAGGTCAGATGTTCCAAGCCAGCATCGCTACCTaGACAGGAATCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PVLQPDSSAPGCTGQMFQASIAT*TGILLG
Trigger: CCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGC...TTGGAACATCTGACCTGTGCATCCAGGAGCCGAGGAGTCAGGTTGTAATACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp CATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGTGCCTGGTAGGCTTGAGTCATTaGAAAGTAGCCCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HTREVRGTGQAQEVNQCLVGLSH*KVAPCQ
Trigger: CTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTAC...CAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACAAGACTGGTGCTCTCTaGTCAGGTGCTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDKTGAL*SGAAVE
Trigger: CTCCACTGCAGCACCTGATCAGAGAGCACCAGTCTT...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR TCA 90 bp GAGAAGAGAATCAGCATACTGTTGGGACACAGCAGGTACCACTGCCTTCTGAAGGCCCGAGCAGCACTGTaGTGCACAGCATCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: EKRISILLGHSRYHCLLKARAAL*CTASAC
Trigger: ACAGGCAGATGCTGTGCATCACAGTGCTGCTCGGGC...CTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAACAGTATGCTGATTCTCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GTACTGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGCATaGTGTCACGACCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: VLLSLPRDGKGSCRSDAHFEVLA*CHDRCQ
Trigger: CTGACATCGGTCGTGACATCATGCAAGAACTTCAAA...GTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR TCA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGTGGTGGGATCTTCACTaGTTTGTTAACCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLWWDLH*FVNPGS
Trigger: ACTCCCAGGGTTAACAAATCAGTGAAGATCCCACCA...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TGCAGCTCTGCTTGCAGCTTGCTAGAAATACAACTTGGTAACAACAGGAGATTGGATTGCTTCCCGCGGTaGCTCCCGCGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: CSSACSLLEIQLGNNRRLDCFPR*LPRLHG
Trigger: TCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATC...CAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGCAGGTGGATCTCGGTaGGGGCGGAGCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEAGGSR*GRSCCH
Trigger: ATGACAGCAGCTCCGCCCGCACCGAGATCCACCTGC...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGGCAGGTGGATCTCGGTaGGGGCGGAGCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPAGGSR*GRSCCH
Trigger: ATGACAGCAGCTCCGCCCGCACCGAGATCCACCTGC...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGCCGGGGCCACGCCACTaGCCTCGCTGTAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LVYVHPQCCREENQHTVGPGPRH*PRCSSR
Trigger: CCGAGAACTACAGCGAGGGCAGTGGCGTGGCCCCGG...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGGCCAGTGACTGGGGCTaGCTCTATTTCACCACTGGA +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGASDWG*LYFTTG
Trigger: TCCAGTGGTGAAATAGAGGCAGCCCCAGTCACTGGC...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCTGTCAGGTTGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTTGCACCAAGAAGACTGGTaGTCTCTGATCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVRLPRDQAALARTFRDLHQEDW*SLIRCC
Trigger: GCAGCACCTGATCAGAGAGCACCAGTCTTCTTGGTG...CAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR GCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAACAGACCCGTACTaGTCTCTCTTCCCCGGGACG +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGSTDPY*SLFPGT
Trigger: CGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCTGTGGGCTGTGGGGTaGTCCAGTGTCATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVLWAVG*SSVISL
Trigger: GAGGGAGATGACACTGGAGCACCCCACAGCCCACAG...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGTGTGTCTCCAGTTGGTaGCTGGATGCTGCCCATGTG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGCVSSW*LDAAHV
Trigger: CACATGGGCAGCATCCAGGCACCAACTGGAGACACA...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCAGTCGCATGGGGGATaGTTCGTAGGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIQSHGG*FVGASC
Trigger: GCAGGAAGCACCTACGAACCATCCCCCATGCGACTG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGGCCTCCAGTCGCATaGGGGATGGTTCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRRPPVA*GMVRRC
Trigger: GCACCTACGAACCATCCCCCATGCGACTGGAGGCCT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACAGGCCTCTGGCAAGATaGAAGACAGGGCATCACAGG +
Preference number: 4 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDRPLAR*KTGHHR
Trigger: CCTGTGATGCCCTGTCTTCCATCTTGCCAGAGGCCT...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGTGCCTGGCAGATTTaGGTCCGTAGGCTGACACAG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGSAWQI*VRRLTQ
Trigger: CTGTGTCAGCCTACGGACCCAAATCTGCCAGGCACT...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGGAGGTCCGAGGCACTaGCCAAGCTCAAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGGGPRH*PSSRGE
Trigger: TTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCTGGTCTCTTTCCTGTaGGCTGTGGGGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGILVSFL*AVGCSS
Trigger: ACTGGAGCACCCCACAGCCCACAGGAAAGAGACCAG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGGCCATTCTGACCATCTaGTCTCTTTCCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FPGTERAAADLMRTLKFLAILTI*SLSCGL
Trigger: CAGCCCACAGGAAAGAGACCAGATGGTCAGAATGGC...CAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGTGGCAGGGAAGGTaGTCAGGGGAACACGGGCAC +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMVWQGR*SGEHGH
Trigger: GTGCCCGTGTTCCCCTGACCACCTTCCCTGCCACAC...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR CAA 72 bp AGGGCCCGTGAAGTTGCAGCTTTCACTAAGCGATTCTaGCTGTCATTCAGCCCGAGCAGCACTGTGATGCAC +
Preference number: 4 (lower is better)
Translates to: RAREVAAFTKRF*LSFSPSSTVMH
Trigger: GTGCATCACAGTGCTGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 72 bp GGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTaGAAGTTCTTGCATGATGTCACGACCGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: GTERAAADLMRT*KFLHDVTTDVR
Trigger: CCTGACATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR TCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGGTACTGCAGCTCTCCTaGCTTCAGGATCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGVLQLS*LQDQTE
Trigger: CTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTAC...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCTCTGCCTGTGCCAGTaGCTGGGGCTGCCTCTATTT +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSLCLCQ*LGLPLF
Trigger: AAATAGAGGCAGCCCCAGTCACTGGCACAGGCAGAG...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGACTCTGCCTGTGCCAGTaGCTGGGGCTGCCTCTATTT +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRLCLCQ*LGLPLF
Trigger: AAATAGAGGCAGCCCCAGTCACTGGCACAGGCAGAG...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGGAGGTGAGGGGTTGCTaGATTGCTATTACCGAGTCC +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGEVRGC*IAITES
Trigger: GGACTCGGTAATAGCAATTCAGCAACCCCTCACCTC...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAACCAATCAGGAGGGCTaGGGTGAGGGGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGTNQEG*GEGLLN
Trigger: ATTCAGCAACCCCTCACCTCAGCCCTCCTGATTGGT...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGCCAGCATCGCTACCTaGACAGGAATCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQASIAT*TGILLG
Trigger: CCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGC...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp ATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCCGAGCAGCACTGTaGTGCACAGCATCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: IFPLSSRVSFIQGRSEALARAAL*CTASAC
Trigger: ACAGGCAGATGCTGTGCATCACAGTGCTGCTCGGGC...CAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCAGGTGGATCTCGGTaGGGGCGGAGCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYAGGSR*GRSCCH
Trigger: ATGACAGCAGCTCCGCCCGCACCGAGATCCACCTGC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGGCTGTATTAAGCCTGTaGCCAGTTCTTCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FQIRAYWSTDPYCSLFPGAVLSL*PVLPEA
Trigger: AGCTTCTGGAAGAACTGGGCACAGGCTTAATACAGC...CCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGGGGCCCGGACTGCATTaGTTTTTACCTTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLGPGLH*FLPCLY
Trigger: ATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCC...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGTCCAAGGGCCCGGACTaGATTGCTTTTTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQSKGPD*IAFYLV
Trigger: GACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGA...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp AGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGGCAGGGCGCAGAGCCTaGCAGACAAGAGGCGAAACC +
Preference number: 4 (lower is better)
Translates to: RECVSVVYVSKGSPLKGLAGRRA*QTRGET
Trigger: GGTTTCGCCTCTTGTCTGCCAGGCTCTGCGCCCTGC...CAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR CCA 90 bp GTACTGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACAAATGGTGGATAAGCTaGCTCACTTTGCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: VLLSLPRDGKGSCRSDAHKWWIS*LTLLTR
Trigger: TCTTGTCAGCAAAGTGAGCCAGCTTATCCACCATTT...GTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp CACGGGCACTCCAGAAGCTCGGAGCAGCAGCTCATCAGCTGTGAGGCACCGTCACTGTTAAGTAAATGGTaGATAAGCTGGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: HGHSRSSEQQLISCEAPSLLSKW*ISWLTL
Trigger: CAAAGTGAGCCAGCTTATCCACCATTTACTTAACAG...TGACGGTGCCTCACAGCTGATGAGCTGCTGCTCCGAGCTTCTGGAGTGCCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCAGTCGCATGGGGGATaGTTCGTAGGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSQSHGG*FVGASC
Trigger: GCAGGAAGCACCTACGAACCATCCCCCATGCGACTG...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGAGGCCTCCAGTCGCATaGGGGATGGTTCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMRPPVA*GMVRRC
Trigger: GCACCTACGAACCATCCCCCATGCGACTGGAGGCCT...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GCAGAGCCAGCATCGCTACCTGAACAGGAATCCTCCTTGGGCAGTACGACAATGCTCCATGAAGCTGAATaGATGGATCTGCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: AEPASLPEQESSLGSTTMLHEAE*MDLLPP
Trigger: TGGGGGAAGCAGATCCATCCATTCAGCTTCATGGAG...CATTGTCGTACTGCCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACATTGCTGAAGGCCTCTaGCAAGATGGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDIAEGL*QDGRQG
Trigger: GCCCTGTCTTCCATCTTGCCAGAGGCCTTCAGCAAT...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CCA 90 bp GGCAGGGAAGGTGGTCAGGGGAACACGGGCACTCCAGAAGCTCGGAGCAGCAGCATTCCAAAAAGTCTATaGTGTCTTCACTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GREGGQGNTGTPEARSSSIPKSL*CLHSSV
Trigger: TACAGAAGAGTGAAGACACCATAGACTTTTTGGAAT...GCTGCTGCTCCGAGCTTCTGGAGTGCCCGTGTTCCCCTGACCACCTTCCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAGTGCCTGGCAGATTTaGGTCCGTAGGCTGACACAG +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGISAWQI*VRRLTQ
Trigger: CTGTGTCAGCCTACGGACCCAAATCTGCCAGGCACT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGGAGGTCCGAGGCACTaGCCAAGCTCAAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSGGPRH*PSSRGE
Trigger: TTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCC...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GCAGCTTTCACTAAGCGATTCTTGCTGTCATTCAGCCCGAGCAGCACTGTGATGCTTTCCTGTGGGCTGTaGGGTGCTCCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: AAFTKRFLLSFSPSSTVMLSCGL*GAPVSS
Trigger: AGATGACACTGGAGCACCCCACAGCCCACAGGAAAG...CATCACAGTGCTGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCTGGTCTCTTTCCTGTaGGCTGTGGGGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSLVSFL*AVGCSS
Trigger: ACTGGAGCACCCCACAGCCCACAGGAAAGAGACCAG...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCACTGGTCTCTTTCCTGTaGGCTGTGGGGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLSYKGGPRHWPSSRGESLVSFL*AVGCSS
Trigger: ACTGGAGCACCCCACAGCCCACAGGAAAGAGACCAG...TGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
3UTR CAA 72 bp GCAGAGCCAGCATCGCTACCTGAACAGGAATCCTCCTaGGGCAGTACGACAATGGAAATGCAGAGTCGAATG +
Preference number: 4 (lower is better)
Translates to: AEPASLPEQESS*GSTTMEMQSRM
Trigger: CATTCGACTCTGCATTTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 72 bp GGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTaGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTC +
Preference number: 4 (lower is better)
Translates to: GVSMLTIRVSVR*PRDQAALARTF
Trigger: GAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR TCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCGTTCGCCCATCATACTaGGGAAGCGGAGTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIVRPSY*GSGVGY
Trigger: ATACCCAACTCCGCTTCCTCAGTATGATGGGCGAAC...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTCTCTGCCTGTGCCAGTaGCTGGGGCTGCCTCTATTT +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESLCLCQ*LGLPLF
Trigger: AAATAGAGGCAGCCCCAGTCACTGGCACAGGCAGAG...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCTCCAACTGGAAGAACTaGAGGATGAGGAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: AVTNAFQIRAYWSTDPYCSNWKN*RMRRLH
Trigger: ATGGAGTCTCCTCATCCTTCAGTTCTTCCAGTTGGA...GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGAGGTGAGGGGTTGCTaGATTGCTATTACCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGEVRGC*IAITES
Trigger: GGACTCGGTAATAGCAATTCAGCAACCCCTCACCTC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAACCAATCAGGAGGGCTaGGGTGAGGGGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRTNQEG*GEGLLN
Trigger: ATTCAGCAACCCCTCACCTCAGCCCTCCTGATTGGT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAAATGCAGAGTCGAATaGGCCAGCAGGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIKCRVE*ASRALK
Trigger: CTTCAGAGCCCTGCTGGCTCATTCGACTCTGCATTT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATAAGACTGGTGCTCTCTaGTCAGGTGCTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: NPTDLMLKLRSSYCRLRHKTGAL*SGAAVE
Trigger: CTCCACTGCAGCACCTGATCAGAGAGCACCAGTCTT...ATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGCATTCGGCAGATTGCTaGAGGCCTCTGGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQHSADC*RPLARW
Trigger: CCATCTTGCCAGAGGCCTTCAGCAATCTGCCGAATG...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR TCA 90 bp CTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCCTGGTGTTTCCATGTTaGCAATCAGAGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LFPGTERAAADLMRTLKFLVFPC*QSECLS
Trigger: TGACAGACACTCTGATTGTCAACATGGAAACACCAG...GAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR TCA 90 bp GAGAAGAGAATCAGCATACTGTTGGGACACAGCAGGTACCACTGCCTTCTGAAGCCAGGACAAACTGGCTaGACTGCAGCTCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: EKRISILLGHSRYHCLLKPGQTG*TAALLA
Trigger: TGCAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGG...CTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAACAGTATGCTGATTCTCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp TTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGTCCTTTAGTGTATGTAGCAGCTCATCAGCTGTaGGGCACCGTCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: LWRHVPRHMRSFCPLVYVAAHQL*GTVSIL
Trigger: AAGGATGCTGACGGTGCCTCACAGCTGATGAGCTGC...TACATACACTAAAGGACAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTCATTCGGCAGATTGCTaGAGGCCTCCAGTCGCATGG +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGHSADC*RPPVAW
Trigger: CCATGCGACTGGAGGCCTTCAGCAATCTGCCGAATG...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAACATTCGGCAGATTGCTaGAGGCCTCCAGTCGCATGG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEHSADC*RPPVAW
Trigger: CCATGCGACTGGAGGCCTTCAGCAATCTGCCGAATG...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAAGAGGCGAAACCCATTaGCTCGCTCAGGGATTGCTT +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGRGETH*LAQGLL
Trigger: AAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCT...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGGACATTTGGAGCCATTaGAGTACACCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGDIWSH*STPELP
Trigger: TGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTC...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATTAAGAGTCCGGTGTTaGCTAGCAGCTCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGLRVRC*LAALGG
Trigger: ACCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACCAAGTGTTCCCTTCATaGAGGTTCACTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDQVFPS*RFTLPV
Trigger: CACAGGCAGAGTGAACCTGCATGAAGGGAACACTTG...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCAAGTGTTCCCTTCATaGAGGTTCACTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGQVFPS*RFTLPV
Trigger: CACAGGCAGAGTGAACCTGCATGAAGGGAACACTTG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTACACTGACTGTGGGCTaGCAAGTTCAGGCGTATCAG +
Preference number: 4 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPTLTVG*QVQAYQ
Trigger: CTGATACGCCTGAACTTGGCAGCCCACAGTCAGTGT...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATTCGTAGGTGCTTCCTaGTGCAGAGCCAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRFVGAS*CRASIA
Trigger: AGCGATGCTGGCTCTGCAGCAGGAAGCACCTACGAA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACGGGTGTTCTGAATTCTaGAGGGCTCTGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDGCSEF*RALGKG
Trigger: TCCTTTACCCAGAGCCCTGCAGAATTCAGAACACCC...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR GCA 90 bp TCTGTCAGGTTGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTTGTCACTAAGCGATTCTTaGTGTCATTCAGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SVRLPRDQAALARTFRDLSLSDS*CHSARA
Trigger: TGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGA...CAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR GCA 90 bp AGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGCATGATGTCACGACCGACGGAAAGGGCAGCTaGAGATCTGATGCGCACTTT +
Preference number: 4 (lower is better)
Translates to: RAAADLMRTLKFLHDVTTDGKGS*RSDAHF
Trigger: AAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTC...GGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR GCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTCAACAGACCCGTACTaGTCTCTCTTCCCCGGGACG +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESSTDPY*SLFPGT
Trigger: CGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGA...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGTCAACAGACCCGTACTaGTCTCTCTTCCCCGGGACG +
Preference number: 4 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPSTDPY*SLFPGT
Trigger: CGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGA...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATCTGTGGGCTGTGGGGTaGTCCAGTGTCATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYLWAVG*SSVISL
Trigger: GAGGGAGATGACACTGGAGCACCCCACAGCCCACAG...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGTGTCTCCAGTTGGTaGCTGGATGCTGCCCATGTG +
Preference number: 4 (lower is better)
Translates to: PYSHSVQGFLSYKGGPRHCVSSW*LDAAHV
Trigger: CACATGGGCAGCATCCAGGCACCAACTGGAGACACA...GTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp CTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGCACCACCAAGAAGACTaGTGCTCTCTGATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGSGVSMLTIRVSVRLPRHHQED*CSLIRC
Trigger: GCACCTGATCAGAGAGCACCAGTCTTCTTGGTGGTG...CCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CCA 90 bp CCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTCACAGGCGCTCGCCTaGAGAGTTGGGTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PYSHSVQGFLSYKGGPRHSQALA*RVGCSE
Trigger: TTCAGAACACCCAACTCTCCAGGCGAGCGCCTGTGA...GTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTAGGCCTCTGGCAAGATaGAAGACAGGGCATCACAGG +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSRPLAR*KTGHHR
Trigger: CCTGTGATGCCCTGTCTTCCATCTTGCCAGAGGCCT...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGGGACCAGGCTGCTTTaGCTCGAACATTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGGTRLL*LEHSET
Trigger: AGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCAGATCCGAGCATACTaGTCAACAGACCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIQIRAY*STDPYC
Trigger: GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TGTAAAGCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGCAGATCCGAGCATACTaGTCAACAGACCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: CKAVTNAFQIRAYWSTDPQIRAY*STDPYC
Trigger: GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTG...CGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGCTTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGACAGATCCGAGCATACTaGTCAACAGACCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGQIRAY*STDPYC
Trigger: GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTG...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGACTTTCCTGTGGGCTGTaGGGTGCTCCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRLSCGL*GAPVSS
Trigger: AGATGACACTGGAGCACCCCACAGCCCACAGGAAAG...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCCAGATCCGAGCACTGGTCTCTTTCCTGTaGGCTGTGGGGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: MVSSLFCKAVTNAFQIRALVSFL*AVGCSS
Trigger: ACTGGAGCACCCCACAGCCCACAGGAAAGAGACCAG...TGCTCGGATCTGGAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCATCACAGGGTCAGGTaGGCTCAACTTAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGHHRVR*AQLSFL
Trigger: CAGGAAACTAAGTTGAGCCCACCTGACCCTGTGATG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp GCCCCTAAGATGAAATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCCACAGCAGCTTTATaGAGGCACGTGCCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: APKMKSHRSYAQAQVFLLPTAAL*RHVPRH
Trigger: ATGCCTGGGCACGTGCCTCCATAAAGCTGCTGTGGG...CAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATTTCATCTTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGTTCTCGGAGATGAGCTaGTCGAAGAGCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVFSEMS*SKSRWI
Trigger: GATCCACCTGCTCTTCGATCAGCTCATCTCCGAGAA...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATTCTCGGAGATGAGCTaGTCGAAGAGCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRFSEMS*SKSRWI
Trigger: GATCCACCTGCTCTTCGATCAGCTCATCTCCGAGAA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGTAGTTCTCGGAGATaGGCTGATCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGICSSRR*ADRRAG
Trigger: ACCTGCTCTTCGATCAGCTCATCTCCGAGAACTACA...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGTACTGCAGCTCTCCTaGCTTCAGGATCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSVLQLS*LQDQTE
Trigger: CTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTAC...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGCTGTCCTGGCACACTaGGACATAAGTTTGCCATAC +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGAVLAH*DISLPY
Trigger: GTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACGACAATGGAAATGCAGAGTCGAATGAGCCAGCAGGGCTCTGAAGACCCCTTACTGACTCACTACTGCTaGCCCTTTTCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: TTMEMQSRMSQQGSEDPLLTHYC*PFSNWK
Trigger: CTTCCAGTTGGAAAAGGGTCAGCAGTAGTGAGTCAG...TAAGGGGTCTTCAGAGCCCTGCTGGCTCATTCGACTCTGCATTTCCATTGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGAGGTGAGGGGTTGCTaGATTGCTATTACCGAGTCC +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVEVRGC*IAITES
Trigger: GGACTCGGTAATAGCAATTCAGCAACCCCTCACCTC...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGAAATGCAGAGTCGAATaGGCCAGCAGGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQKCRVE*ASRALK
Trigger: CTTCAGAGCCCTGCTGGCTCATTCGACTCTGCATTT...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCCAGCATCGCTACCTaGACAGGAATCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYASIAT*TGILLG
Trigger: CCCAAGGAGGATTCCTGTTCAGGTAGCGATGCTGGC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GTGCTCTCTGATCAGGTGCTGCAGTGGAGTCTGGTTTATACTGCTGTATTAAGCCATTCGGCAGATTGCTaGAGGCCTCTGGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: VLSDQVLQWSLVYTAVLSHSADC*RPLARW
Trigger: CCATCTTGCCAGAGGCCTTCAGCAATCTGCCGAATG...GCTTAATACAGCAGTATAAACCAGACTCCACTGCAGCACCTGATCAGAGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCTTCTAAAAAGCCCATaGTGGCCCTTCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGILLKSP*WPFWLC
Trigger: ACACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGACTTCTAAAAAGCCCATaGTGGCCCTTCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGLLKSP*WPFWLC
Trigger: ACACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAG...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCACGAACCGACAACTTaGACAGCAGCCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGHEPTT*TAAIFS
Trigger: AGAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GCTGTTCATCAACAATTACCTGAATCAAGCTGTATAAAAGAGAGAGTGTGTGTCCCGGGGCCACGCCACTaGCCTCGCTGTAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: AVHQQLPESSCIKERVCVPGPRH*PRCSSR
Trigger: CCGAGAACTACAGCGAGGGCAGTGGCGTGGCCCCGG...GACACACACTCTCTCTTTTATACAGCTTGATTCAGGTAATTGTTGATGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR GCA 90 bp AGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGCATGATGTCACGACCGCAGTACACCAGAGCTaGCAGGGCTTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: RAAADLMRTLKFLHDVTTAVHQS*QGLKNF
Trigger: GAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGC...GGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AGACTCCCAGGGCCCGTGAAGTTGCAGCTTTCACTAAGCGATTCTTGCTGTCATGACATTTGGAGCCATTaGAGTACACCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RLPGPVKLQLSLSDSCCHDIWSH*STPELP
Trigger: TGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTC...ATGACAGCAAGAATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGGGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATTAAGAGTCCGGTGTTaGCTAGCAGCTCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRLRVRC*LAALGG
Trigger: ACCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTGCCAGTGACTGGGGCTaGCTCTATTTCACCACTGGA +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESASDWG*LYFTTG
Trigger: TCCAGTGGTGAAATAGAGGCAGCCCCAGTCACTGGC...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCCAGATCCGAGCAGCCAGTGACTGGGGCTaGCTCTATTTCACCACTGGA +
Preference number: 4 (lower is better)
Translates to: MVSSLFCKAVTNAFQIRAASDWG*LYFTTG
Trigger: TCCAGTGGTGAAATAGAGGCAGCCCCAGTCACTGGC...TGCTCGGATCTGGAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGCCAGTGACTGGGGCTaGCTCTATTTCACCACTGGA +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKASDWG*LYFTTG
Trigger: TCCAGTGGTGAAATAGAGGCAGCCCCAGTCACTGGC...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CCTGTATTACAACCTGACTCCTCGGCTCCTGGATGCACAGGTCAGATGTTCCAACAAGTGTTCCCTTCATaGAGGTTCACTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PVLQPDSSAPGCTGQMFQQVFPS*RFTLPV
Trigger: CACAGGCAGAGTGAACCTGCATGAAGGGAACACTTG...TTGGAACATCTGACCTGTGCATCCAGGAGCCGAGGAGTCAGGTTGTAATACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGACAAGTGTTCCCTTCATaGAGGTTCACTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGQVFPS*RFTLPV
Trigger: CACAGGCAGAGTGAACCTGCATGAAGGGAACACTTG...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTGATGCGCACTTTGAAGTTCTTGCATGATGTCACGACCGATGTCAGGGCATTGACACTGACTGTGGGCTaGCAAGTTCAGGCGTATCAG +
Preference number: 4 (lower is better)
Translates to: LMRTLKFLHDVTTDVRALTLTVG*QVQAYQ
Trigger: CTGATACGCCTGAACTTGGCAGCCCACAGTCAGTGT...CAATGCCCTGACATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGGAGGGGTTGCTGAATTaGTATTACCGAGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGEGLLN*YYRVQK
Trigger: CTTCTGGACTCGGTAATAGCAATTCAGCAACCCCTC...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTTCGTAGGTGCTTCCTaGTGCAGAGCCAGCATCGCT +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESFVGAS*CRASIA
Trigger: AGCGATGCTGGCTCTGCAGCAGGAAGCACCTACGAA...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTGATCTGCTTCCCCCATaGACTTGCAAATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPDLLPP*TCKSPL
Trigger: GAGAGGTGATTTGCAAGTGCATGGGGGAAGCAGATC...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp GCAGCTTTCACTAAGCGATTCTTGCTGTCATTCAGCCCGAGCAGCACTGTGATGTGCTCTCTGATCAGGTaGTGCAGTGGAGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: AAFTKRFLLSFSPSSTVMCSLIR*CSGVWF
Trigger: AAACCAGACTCCACTGCAGCACCTGATCAGAGAGCA...CATCACAGTGCTGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAAAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGTGATGCACAGCATCTaGCTGTCATTCGGCAGATTG +
Preference number: 4 (lower is better)
Translates to: LGSGVSMLTIRVSVRLPRVMHSI*LSFGRL
Trigger: CAATCTGCCGAATGACAGGCAGATGCTGTGCATCAC...CCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR GCA 90 bp GTTAACCCTGGGAGTGCCCCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGTCACTAAGCGATTCTTaGTGTCATTCAGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: VNPGSAPCDPDESKQTARSLSDS*CHSARA
Trigger: TGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGA...CCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGGGGCACTCCCAGGGTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCAAGAGGTGAATCAGTaGCTGGCAGATTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSQEVNQ*LADLGP
Trigger: CGGACCCAAATCTGCCAGGCACTGATTCACCTCTTG...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCAAGAGGTGAATCAGTaGCTGGCAGATTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVQEVNQ*LADLGP
Trigger: CGGACCCAAATCTGCCAGGCACTGATTCACCTCTTG...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGTGTGTCTCCAGTTGGTaGCTGGATGCTGCCCATGTG +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMCVSSW*LDAAHV
Trigger: CACATGGGCAGCATCCAGGCACCAACTGGAGACACA...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCTCAGGTCTTCCTACTaGCGCCTTCGACATCTAGAA +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGILRSSY*RLRHLE
Trigger: TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGGCAGGGCGCAGAGCCTaGCAGACAAGAGGCGAAACC +
Preference number: 4 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLAGRRA*QTRGET
Trigger: GGTTTCGCCTCTTGTCTGCCAGGCTCTGCGCCCTGC...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGCTGTTAAGTAAATGGTaGATAAGCTGGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: CSLFPGTERAAADLMRTLLLSKW*ISWLTL
Trigger: CAAAGTGAGCCAGCTTATCCACCATTTACTTAACAG...CAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp CTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGAATTCTGCAGGGCTCTaGGTAAAGGACCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LGSGVSMLTIRVSVRLPRNSAGL*VKDRSA
Trigger: TGCTGAACGGTCCTTTACCCAGAGCCCTGCAGAATT...CCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CCA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGGACCAGGCTGCTTTaGCTCGAACATTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQGTRLL*LEHSET
Trigger: AGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCC...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CCA 90 bp GCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCCTCTTCCTGGAAACTTaGGTCTGGTGTTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: AVTNAFQIRAYWSTDPYCLFLET*VWCFHV
Trigger: AACATGGAAACACCAGACCCAAGTTTCCAGGAAGAG...GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp TCTGTCAGGTTGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTTGCTCTTCCTGGAAACTTaGGTCTGGTGTTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: SVRLPRDQAALARTFRDLLFLET*VWCFHV
Trigger: AACATGGAAACACCAGACCCAAGTTTCCAGGAAGAG...CAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CCA 90 bp GATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAGTAGAAATTAGGGCCTaGATAGACTCCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: DPSILVNRPVLLSLPRDGVEIRA*IDSSMI
Trigger: AATCATTGAGGAGTCTATCCAGGCCCTAATTTCTAC...TCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp ATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGCTTTCCTGTGGGCTGTaGGGTGCTCCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: IFPLSSRVSFIQGRSEALLSCGL*GAPVSS
Trigger: AGATGACACTGGAGCACCCCACAGCCCACAGGAAAG...CAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAACTTTCCTGTGGGCTGTaGGGTGCTCCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLELSCGL*GAPVSS
Trigger: AGATGACACTGGAGCACCCCACAGCCCACAGGAAAG...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AGGTTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGACCATGGCCAGTGCTATaGAGTCACTCCAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLEGPACWELTLVIGLWGPWPVL*SHSKGG
Trigger: ACCACCTTTGGAGTGACTCCATAGCACTGGCCATGG...TCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGGAATCAGCATACTGTTaGGACACAGCAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGESAYC*DTAGTT
Trigger: AGTGGTACCTGCTGTGTCCCAACAGTATGCTGATTC...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp CCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGTAGTTCTCGGAGATaGGCTGATCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PYSHSVQGFLSYKGGPRHCSSRR*ADRRAG
Trigger: ACCTGCTCTTCGATCAGCTCATCTCCGAGAACTACA...GTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CCTGTATTACAACCTGACTCCTCGGCTCCTGGATGCACAGGTCAGATGTTCCAATCTGGGAGGTACTTTTaGCATTTGGAGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: PVLQPDSSAPGCTGQMFQSGRYF*HLEPLQ
Trigger: CTGCAATGGCTCCAAATGTCAAAAGTACCTCCCAGA...TTGGAACATCTGACCTGTGCATCCAGGAGCCGAGGAGTCAGGTTGTAATACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGTACTGCAGCTCTCCTaGCTTCAGGATCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEVLQLS*LQDQTE
Trigger: CTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTAC...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGGGAGTCCGTGAAACATaGATTTCTTTAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQGVRET*ISLAQL
Trigger: TAGCTGTGCTAAAGAAATTCATGTTTCACGGACTCC...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGTCCAGGGAGTCCGTaGAACATGAATTTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGSPGSP*NMNFFS
Trigger: GCTAAAGAAATTCATGTTTCACGGACTCCCTGGACT...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGTTCGCCCATCATACTaGGGAAGCGGAGTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGVRPSY*GSGVGY
Trigger: ATACCCAACTCCGCTTCCTCAGTATGATGGGCGAAC...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCCAACTGGAAGAACTaGAGGATGAGGAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGISNWKN*RMRRLH
Trigger: ATGGAGTCTCCTCATCCTTCAGTTCTTCCAGTTGGA...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTAGCATCAGAAAAGTCTaGCTCACTACTGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPSIRKV*LTTADP
Trigger: AGGGTCAGCAGTAGTGAGTCAGACTTTTCTGATGCT...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GCCCCTAAGATGAAATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGAAATGCAGAGTCGAATaGGCCAGCAGGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: APKMKSHRSYAQAQVFLLKCRVE*ASRALK
Trigger: CTTCAGAGCCCTGCTGGCTCATTCGACTCTGCATTT...CAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATTTCATCTTAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAAATGCAGAGTCGAATaGGCCAGCAGGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKKCRVE*ASRALK
Trigger: CTTCAGAGCCCTGCTGGCTCATTCGACTCTGCATTT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGTTTGAAGTTCTTGCATaGTGTCACGACCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGFEVLA*CHDRCQ
Trigger: CTGACATCGGTCGTGACATCATGCAAGAACTTCAAA...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGTCCTTTAGTGTATGTAGCCAAGCTCAAGAGGTaGATCAGTGCCTGGCAGATT +
Preference number: 4 (lower is better)
Translates to: LWRHVPRHMRSFCPLVYVAKLKR*ISAWQI
Trigger: AATCTGCCAGGCACTGATTCACCTCTTGAGCTTGGC...TACATACACTAAAGGACAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCCAAGCTCAAGAGGTaGATCAGTGCCTGGCAGATT +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGAKLKR*ISAWQI
Trigger: AATCTGCCAGGCACTGATTCACCTCTTGAGCTTGGC...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTaGATCAGTGCCTGGCAGATT +
Preference number: 4 (lower is better)
Translates to: IFPLSSRVSFIQGRSEALAKLKR*ISAWQI
Trigger: AATCTGCCAGGCACTGATTCACCTCTTGAGCTTGGC...CAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR TCA 90 bp TGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCCAAGCTCAAGAGGTaGATCAGTGCCTGGCAGATT +
Preference number: 4 (lower is better)
Translates to: WTIFPLSSRVSFIQGRSEAKLKR*ISAWQI
Trigger: AATCTGCCAGGCACTGATTCACCTCTTGAGCTTGGC...CTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR TCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTGCCAAGCTCAAGAGGTaGATCAGTGCCTGGCAGATT +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESAKLKR*ISAWQI
Trigger: AATCTGCCAGGCACTGATTCACCTCTTGAGCTTGGC...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGTTTGCTGCGTCTGTCTaGGACAGGGAAAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: LGSGVSMLTIRVSVRLPRFAASV*DREKAH
Trigger: ATGTGCTTTTTCCCTGTCTCAGACAGACGCAGCAAA...CCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591683.1
CDS-3UTR GCA 90 bp ATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCCAGATCCGAGCAAGAGGCGAAACCCATTaGCTCGCTCAGGGATTGCTT +
Preference number: 4 (lower is better)
Translates to: MVSSLFCKAVTNAFQIRARGETH*LAQGLL
Trigger: AAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCT...TGCTCGGATCTGGAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAGGCGAAACCCATTaGCTCGCTCAGGGATTGCTT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLERGETH*LAQGLL
Trigger: AAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGCAGTACACCAGAGCTaGCAGGGCTTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSAVHQS*QGLKNF
Trigger: GAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGC...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGCAGTACACCAGAGCTaGCAGGGCTTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVAVHQS*QGLKNF
Trigger: GAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGC...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGACATTTGGAGCCATTaGAGTACACCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVDIWSH*STPELP
Trigger: TGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTC...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGGCACTGGATTCTGATTaGTGTGGTTTGATAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FPGTERAAADLMRTLKFLALDSD*CGLIGV
Trigger: AACACCTATCAAACCACAGCAATCAGAATCCAGTGC...CAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTCATTTTACTCTGCATaGCTCCTTCAGCATCAGAAA +
Preference number: 4 (lower is better)
Translates to: LFPGTERAAADLMRTLKFSFYSA*LLQHQK
Trigger: TTTCTGATGCTGAAGGAGGCATGCAGAGTAAAATGA...GAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAACACTGACTGTGGGCTaGCAAGTTCAGGCGTATCAG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLETLTVG*QVQAYQ
Trigger: CTGATACGCCTGAACTTGGCAGCCCACAGTCAGTGT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGGAAGAACATGGCTGTTaGAGAAGTAGTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQEEHGC*RSSWTS
Trigger: TGAAGTCCAACTACTTCTGCAACAGCCATGTTCTTC...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGCTTCCCCCATGCACTTaGAAATCACCTCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQLPPCT*KSPLQA
Trigger: AGCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAG...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACGAGTCTGGTTTATACTaGTGTATTAAGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDESGLY*CIKPVP
Trigger: GGGCACAGGCTTAATACAGCAGTATAAACCAGACTC...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR GCA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGTGCTCTCTGATCAGGTaGTGCAGTGGAGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQCSLIR*CSGVWF
Trigger: AAACCAGACTCCACTGCAGCACCTGATCAGAGAGCA...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR GCA 90 bp TTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGAGGTGGGTGTTCTGAATTCTaGAGGGCTCTGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LEGPACWELTLVIGLWGGGCSEF*RALGKG
Trigger: TCCTTTACCCAGAGCCCTGCAGAATTCAGAACACCC...ACCTCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGTGATGCACAGCATCTaGCTGTCATTCGGCAGATTG +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSVMHSI*LSFGRL
Trigger: CAATCTGCCGAATGACAGGCAGATGCTGTGCATCAC...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AAACAAACGGCCAGGATCTCTTCTAAAAAGCCCATGATGGCCCTTCTGGCTGTGTCCAAGGGCCCGGACTaGATTGCTTTTTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: KQTARISSKKPMMALLAVSKGPD*IAFYLV
Trigger: GACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGA...CACAGCCAGAAGGGCCATCATGGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGACGGAAAGGGCAGCTaGAGATCTGATGCGCACTTT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEDGKGS*RSDAHF
Trigger: AAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTC...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGACGGAAAGGGCAGCTaGAGATCTGATGCGCACTTT +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMDGKGS*RSDAHF
Trigger: AAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTC...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCTCAGGTCTTCCTACTaGCGCCTTCGACATCTAGAA +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVLRSSY*RLRHLE
Trigger: TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAG...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGTCCTTTAGTGTATGTATCCTCGGCTCCTGGATaGACAGGTCAGATGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LWRHVPRHMRSFCPLVYVSSAPG*TGQMFQ
Trigger: TTGGAACATCTGACCTGTGCATCCAGGAGCCGAGGA...TACATACACTAAAGGACAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCCCTCAAAGCCCGTCTaGTTGGCCTGTATTACAACC +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKPSKPV*LACITT
Trigger: GGTTGTAATACAGGCCAAGCAGACGGGCTTTGAGGG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TCTGTCAGGTTGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTTGCATCAATATTGCATTTaGTGCGTCTGTCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: SVRLPRDQAALARTFRDLHQYCI*CVCLRQ
Trigger: CTGTCTCAGACAGACGCAGCAAATGCAATATTGATG...CAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591683.1
CDS-3UTR GCA 90 bp TTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGTACCTCATTTTACTCTaGATGCCTCCTTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: FPGTERAAADLMRTLKFLYLILL*MPPSAS
Trigger: TGATGCTGAAGGAGGCATGCAGAGTAAAATGAGGTA...CAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGACCAGTCGGCAAGCCTaGACAAGAAGAGCACTAACG +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMTSRQA*TRRALT
Trigger: CGTTAGTGCTCTTCTTGTCCAGGCTTGCCGACTGGT...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAACCAGTCGGCAAGCCTaGACAAGAAGAGCACTAACG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLETSRQA*TRRALT
Trigger: CGTTAGTGCTCTTCTTGTCCAGGCTTGCCGACTGGT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTCAGGTAAAGGTGCGTaGGTGGACACTATAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESSGKGA*VDTIAP
Trigger: GGGAGCTATAGTGTCCACCCACGCACCTTTACCTGA...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGACTCCATGAAGCTGAATaGATGGATCTGCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRLHEAE*MDLLPP
Trigger: TGGGGGAAGCAGATCCATCCATTCAGCTTCATGGAG...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTGATCAGGTGCTGCAGTaGAGTCTGGTTTATACTGCT +
Preference number: 4 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPDQVLQ*SLVYTA
Trigger: AGCAGTATAAACCAGACTCCACTGCAGCACCTGATC...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGATCAGGTGCTGCAGTaGAGTCTGGTTTATACTGCT +
Preference number: 4 (lower is better)
Translates to: LGSGVSMLTIRVSVRLPRDQVLQ*SLVYTA
Trigger: AGCAGTATAAACCAGACTCCACTGCAGCACCTGATC...CCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAATTGCTGAAGGCCTCTaGCAAGATGGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEIAEGL*QDGRQG
Trigger: GCCCTGTCTTCCATCTTGCCAGAGGCCTTCAGCAAT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGACCAGGCTGCTTTaGCTCGAACATTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGGTRLL*LEHSET
Trigger: AGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCC...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCTCTTCCTGGAAACTTaGGTCTGGTGTTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGLFLET*VWCFHV
Trigger: AACATGGAAACACCAGACCCAAGTTTCCAGGAAGAG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTCAGATCCGAGCATACTaGTCAACAGACCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESQIRAY*STDPYC
Trigger: GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTG...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAAAGTAGCCCCTTGCCAGAAGCCATTCTGACCATCTaGTCTCTTTCCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LQAPSSRLESLKSSPLPEAILTI*SLSCGL
Trigger: CAGCCCACAGGAAAGAGACCAGATGGTCAGAATGGC...TTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCCATTCTGACCATCTaGTCTCTTTCCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGAILTI*SLSCGL
Trigger: CAGCCCACAGGAAAGAGACCAGATGGTCAGAATGGC...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTACTGCTCCATCGGACTTTCATaGCAGCTTCTTGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: AVTNAFQIRAYWSTDPYCSIGLS*QLLVFI
Trigger: GATAAAGACAAGAAGCTGCCATGAAAGTCCGATGGA...GCAGTACGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587314.1
CDS-3UTR TCA 90 bp GAGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTTTCTCGGAGATGAGCTaGTCGAAGAGCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: ERVCVCRLCVKRITSKGPFSEMS*SKSRWI
Trigger: GATCCACCTGCTCTTCGATCAGCTCATCTCCGAGAA...AGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAATGTAGTTCTCGGAGATaGGCTGATCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLECSSRR*ADRRAG
Trigger: ACCTGCTCTTCGATCAGCTCATCTCCGAGAACTACA...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTGCTGTCCTGGCACACTaGGACATAAGTTTGCCATAC +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESAVLAH*DISLPY
Trigger: GTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGC...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAAAGTAGCCCCTTGCCAGAAGCTGTCCTGGCACACTaGGACATAAGTTTGCCATAC +
Preference number: 4 (lower is better)
Translates to: LQAPSSRLESLKSSPLPEAVLAH*DISLPY
Trigger: GTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGC...TTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp GTTAACCCTGGGAGTGCCCCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGGGAGTCCGTGAAACATaGATTTCTTTAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: VNPGSAPCDPDESKQTARGVRET*ISLAQL
Trigger: TAGCTGTGCTAAAGAAATTCATGTTTCACGGACTCC...CCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGGGGCACTCCCAGGGTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCGGAAGAACTGAAGGATaGGGAGACTCCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIGRTEG*GDSIFF
Trigger: GAAAAAGATGGAGTCTCCTCATCCTTCAGTTCTTCC...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGGAAGAACTGAAGGATaGGGAGACTCCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGGRTEG*GDSIFF
Trigger: GAAAAAGATGGAGTCTCCTCATCCTTCAGTTCTTCC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCTGACTCACTACTGCTaGCCCTTTTCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMLTHYC*PFSNWK
Trigger: CTTCCAGTTGGAAAAGGGTCAGCAGTAGTGAGTCAG...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAGAAAGAAACTGCTTTaGGCCTTCCAAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIRKKLL*AFQDGR
Trigger: TCTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AGACTCCCAGGGCCCGTGAAGTTGCAGCTTTCACTAAGCGATTCTTGCTGTCATAGAAAGAAACTGCTTTaGGCCTTCCAAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: RLPGPVKLQLSLSDSCCHRKKLL*AFQDGR
Trigger: TCTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCT...ATGACAGCAAGAATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGGGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCAAGAGTGTGAGACTTaGCACACGAACATTAACATC +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGQECET*HTNINI
Trigger: GATGTTAATGTTCGTGTGTCAAGTCTCACACTCTTG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TGCAGCTCTGCTTGCAGCTTGCTAGAAATACAACTTGGTAACAACAGGAGATTGACCAATCAGGAGGGCTaGGGTGAGGGGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: CSSACSLLEIQLGNNRRLTNQEG*GEGLLN
Trigger: ATTCAGCAACCCCTCACCTCAGCCCTCCTGATTGGT...CAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp CAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCCTTGGAAAGACTGGTGCTCTCTaGTCAGGTGCTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QISKGPDCIAFYLVFILGKTGAL*SGAAVE
Trigger: CTCCACTGCAGCACCTGATCAGAGAGCACCAGTCTT...TCCAAGGATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGAGGGTTGCAGAAAATaGAGCAAATTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSEGCRK*SKFPRA
Trigger: GGCCCTTGGAAATTTGCTTCATTTTCTGCAACCCTC...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGAGGGTTGCAGAAAATaGAGCAAATTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FLSYKGGPRHWPSSRGESEGCRK*SKFPRA
Trigger: GGCCCTTGGAAATTTGCTTCATTTTCTGCAACCCTC...TGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATTTGAAGTTCTTGCATaGTGTCACGACCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGFEVLA*CHDRCQ
Trigger: CTGACATCGGTCGTGACATCATGCAAGAACTTCAAA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTTCTTCTGTAAAGCGGTaGCCAATGCATTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSSSVKR*PMHSRS
Trigger: GGATCTGGAATGCATTGGTCACCGCTTTACAGAAGA...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTGATGCGCACTTTGAAGTTCTTGCATGATGTCACGACCGATGTCAGGGCATTGTCTTCTGTAAAGCGGTaGCCAATGCATTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LMRTLKFLHDVTTDVRALSSVKR*PMHSRS
Trigger: GGATCTGGAATGCATTGGTCACCGCTTTACAGAAGA...CAATGCCCTGACATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR TCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGTCTTCTGTAAAGCGGTaGCCAATGCATTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVSSVKR*PMHSRS
Trigger: GGATCTGGAATGCATTGGTCACCGCTTTACAGAAGA...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATGGTGGGATCTTCACTaGTTTGTTAACCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRWWDLH*FVNPGS
Trigger: ACTCCCAGGGTTAACAAATCAGTGAAGATCCCACCA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGGCCTGTATTACAACCTaGCTCCTCGGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LVYVHPQCCREENQHTVGACITT*LLGSWM
Trigger: CATCCAGGAGCCGAGGAGTCAGGTTGTAATACAGGC...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGACACGAACCGACAACTTaGACAGCAGCCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRHEPTT*TAAIFS
Trigger: AGAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTG...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTGAATCAAGCTGTATAAAAGATTGCTTCCCGCGGTaGCTCCCGCGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: TGNPSAVHQQLPESSCIKDCFPR*LPRLHG
Trigger: TCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATC...TTTTATACAGCTTGATTCAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR GCA 90 bp ATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAAAACAAAAGACATCTGTaGAACTCTCTAATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: IRAYWSTDPYCSLFPGTENKRHL*NSLMLQ
Trigger: TTGCAGCATTAGAGAGTTGCACAGATGTCTTTTGTT...TTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGAGGTGAGGGGTTGCTGAATTaGTATTACCGAGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LEGPACWELTLVIGLWGGEGLLN*YYRVQK
Trigger: CTTCTGGACTCGGTAATAGCAATTCAGCAACCCCTC...ACCTCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAACTTCCCCCATGCACTTaGAAATCACCTCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLELPPCT*KSPLQA
Trigger: AGCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAG...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGTGATGCACAGCATCTaGCTGTCATTCGGCAGATTG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEVMHSI*LSFGRL
Trigger: CAATCTGCCGAATGACAGGCAGATGCTGTGCATCAC...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAAAGTAGCCCCTTGCCAGAAGTGATGCACAGCATCTaGCTGTCATTCGGCAGATTG +
Preference number: 4 (lower is better)
Translates to: LQAPSSRLESLKSSPLPEVMHSI*LSFGRL
Trigger: CAATCTGCCGAATGACAGGCAGATGCTGTGCATCAC...TTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATCACTAAGCGATTCTTaGTGTCATTCAGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRSLSDS*CHSARA
Trigger: TGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGTGCATTTGCTGCGTCTaGAACAAATATGACATCCTG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGCICCV*NKYDIL
Trigger: CAGGATGTCATATTTGTTGCAGACGCAGCAAATGCA...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTTCCAAGGGCCCGGACTaGATTGCTTTTTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGSKGPD*IAFYLV
Trigger: GACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGA...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTCCAAGGGCCCGGACTaGATTGCTTTTTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKSKGPD*IAFYLV
Trigger: GACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGA...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATCAAGAGGTGAATCAGTaGCTGGCAGATTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYQEVNQ*LADLGP
Trigger: CGGACCCAAATCTGCCAGGCACTGATTCACCTCTTG...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCTCAGGTCTTCCTACTaGCGCCTTCGACATCTAGAA +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMLRSSY*RLRHLE
Trigger: TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAG...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AGGTTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGAGCTGAACTGCAGCTCTaGTTGCAGCTTGCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: RLEGPACWELTLVIGLWGAELQL*LQLARN
Trigger: ATTTCTAGCAAGCTGCAAGCAGAGCTGCAGTTCAGC...TCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGAAAATGGAAGACACCTaGCTTTACACGTGTATTTTA +
Preference number: 4 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLKMEDT*LYTCIL
Trigger: TAAAATACACGTGTAAAGGCAGGTGTCTTCCATTTT...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATTGGTCGAGAAGCACTaGATTCTGATTGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGLVEKH*ILIAVV
Trigger: AACCACAGCAATCAGAATCCAGTGCTTCTCGACCAA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCACAGGCACGTGTCTTTaGAGAAGGGTCTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGITGTCL*RRVFQC
Trigger: ACATTGAAAGACCCTTCTCCAAAGACACGTGCCTGT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGTTGAGCCTTCCAAGATaGCAGATAAAACTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGLSLPR*QIKLAE
Trigger: CTCTGCAAGTTTTATCTGCCATCTTGGAAGGCTCAA...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGTAAAAGCCCTTCTGTaGTCACTGGTATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGVKALL*SLVSSA
Trigger: TGCTGAAGATACCAGTGACCACAGAAGGGCTTTTAC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCGTAAAAGCCCTTCTGTaGTCACTGGTATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIVKALL*SLVSSA
Trigger: TGCTGAAGATACCAGTGACCACAGAAGGGCTTTTAC...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATTCAGGTAAAGGTGCGTaGGTGGACACTATAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYSGKGA*VDTIAP
Trigger: GGGAGCTATAGTGTCCACCCACGCACCTTTACCTGA...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AGACTCCCAGGGCCCGTGAAGTTGCAGCTTTCACTAAGCGATTCTTGCTGTCATAACAGGAATCCTCCTTaGGCAGTACGACAATGGAAA +
Preference number: 4 (lower is better)
Translates to: RLPGPVKLQLSLSDSCCHNRNPP*AVRQWK
Trigger: TTTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTT...ATGACAGCAAGAATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGGGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAATGAAGCTGAATGGATaGATCTGCTTCCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRMKLNG*ICFPHA
Trigger: TGCATGGGGGAAGCAGATCCATCCATTCAGCTTCAT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTTCCATCGGACTTTCATaGCAGCTTCTGTTAGAACAG +
Preference number: 4 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPSIGLS*QLLLEQ
Trigger: CTGTTCTAACAGAAGCTGCCATGAAAGTCCGATGGA...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCATCGGACTTTCATaGCAGCTTCTGTTAGAACAG +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGSIGLS*QLLLEQ
Trigger: CTGTTCTAACAGAAGCTGCCATGAAAGTCCGATGGA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAAAGGGATTCCAAAAAGTCTATaGTGTCTTCACTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: EHTGQQTRTALSSPGRKGIPKSL*CLHSSV
Trigger: TACAGAAGAGTGAAGACACCATAGACTTTTTGGAAT...CCCTTTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp TGCAGCTCTGCTTGCAGCTTGCTAGAAATACAACTTGGTAACAACAGGAGATTGCTTTCCTGTGGGCTGTaGGGTGCTCCAGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: CSSACSLLEIQLGNNRRLLSCGL*GAPVSS
Trigger: AGATGACACTGGAGCACCCCACAGCCCACAGGAAAG...CAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCCATTCTGACCATCTaGTCTCTTTCCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYAILTI*SLSCGL
Trigger: CAGCCCACAGGAAAGAGACCAGATGGTCAGAATGGC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
3UTR CAA 72 bp CCATCAAGTAGGCTTGAGTCATTGAAAAGTAGCCCCTaGCCAGAAGAGTCAATACCTGTAAGGCCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PSSRLESLKSSP*PEESIPVRPPV
Trigger: GACTGGAGGCCTTACAGGTATTGACTCTTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 72 bp AGGGAAAAAGCACATAGACTCCCAGGGCCCGTGAAGTaGCAGCTTTCACTAAGCGATTCTTGCTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: REKAHRLPGPVK*QLSLSDSCCHS
Trigger: TGAATGACAGCAAGAATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGGGAGTCTATGTGCTTTTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATTGTAGTTCTCGGAGATaGGCTGATCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYCSSRR*ADRRAG
Trigger: ACCTGCTCTTCGATCAGCTCATCTCCGAGAACTACA...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTTCTGGGAGGTACTTTTaGCATTTGGAGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGSGRYF*HLEPLQ
Trigger: CTGCAATGGCTCCAAATGTCAAAAGTACCTCCCAGA...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000184956.11
ENST00000585976.5
CDS-3UTR TCA 90 bp ATGTACTGCAGCTCTCCTGACTTCAGGATCAGACTGAGCCAAGTCACTCAACTTTCTGGGAGGTACTTTTaGCATTTGGAGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: MYCSSPDFRIRLSQVTQLSGRYF*HLEPLQ
Trigger: CTGCAATGGCTCCAAATGTCAAAAGTACCTCCCAGA...AAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR TCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTACTTCAGGATCAGACTaGGCCAAGTCACTCAACTTC +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGTSGSD*AKSLNF
Trigger: GAAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGT...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAACTTCAGGATCAGACTaGGCCAAGTCACTCAACTTC +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLETSGSD*AKSLNF
Trigger: GAAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAAGTACTGCAGCTCTCCTaGCTTCAGGATCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: ECVSVVYVSKGSPLKGLKVLQLS*LQDQTE
Trigger: CTCAGTCTGATCCTGAAGTCAGGAGAGCTGCAGTAC...TTTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCTGTCCTGGCACACTaGGACATAAGTTTGCCATAC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYAVLAH*DISLPY
Trigger: GTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGGAGTCCGTGAAACATaGATTTCTTTAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGGVRET*ISLAQL
Trigger: TAGCTGTGCTAAAGAAATTCATGTTTCACGGACTCC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGTCCAGGGAGTCCGTaGAACATGAATTTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRSPGSP*NMNFFS
Trigger: GCTAAAGAAATTCATGTTTCACGGACTCCCTGGACT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAAGTCCAGGGAGTCCGTaGAACATGAATTTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: FLSYKGGPRHWPSSRGESSPGSP*NMNFFS
Trigger: GCTAAAGAAATTCATGTTTCACGGACTCCCTGGACT...TGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGGTTCGCCCATCATACTaGGGAAGCGGAGTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LVYVHPQCCREENQHTVGVRPSY*GSGVGY
Trigger: ATACCCAACTCCGCTTCCTCAGTATGATGGGCGAAC...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGAAGCACTGGATTCTaGTTGCTGTGGTTTGATAGG +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRRSTGF*LLWFDR
Trigger: CCTATCAAACCACAGCAATCAGAATCCAGTGCTTCT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTTCCAACTGGAAGAACTaGAGGATGAGGAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGSNWKN*RMRRLH
Trigger: ATGGAGTCTCCTCATCCTTCAGTTCTTCCAGTTGGA...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGAGCATCAGAAAAGTCTaGCTCACTACTGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMSIRKV*LTTADP
Trigger: AGGGTCAGCAGTAGTGAGTCAGACTTTTCTGATGCT...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTAGCATCAGAAAAGTCTaGCTCACTACTGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGSIRKV*LTTADP
Trigger: AGGGTCAGCAGTAGTGAGTCAGACTTTTCTGATGCT...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTAGAAAGAAACTGCTTTaGGCCTTCCAAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSRKKLL*AFQDGR
Trigger: TCTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCT...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTAGGCACTTAATTATCTaGGTAACGGTCTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPRHLII*VTVCED
Trigger: ATCCTCACAGACCGTTACTCAGATAATTAAGTGCCT...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GAGAAGAGAATCAGCATACTGTTGGGACACAGCAGGTACCACTGCCTTCTGAAGCTTTGGTCAGCAGGCTaGGTTTTAGACGATCATAAG +
Preference number: 4 (lower is better)
Translates to: EKRISILLGHSRYHCLLKLWSAG*VLDDHK
Trigger: CTTATGATCGTCTAAAACTCAGCCTGCTGACCAAAG...CTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAACAGTATGCTGATTCTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCTTTGGTCAGCAGGCTaGGTTTTAGACGATCATAAG +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVLWSAG*VLDDHK
Trigger: CTTATGATCGTCTAAAACTCAGCCTGCTGACCAAAG...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TCTGTCAGGTTGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTTGAGACTTGTCTTCAAGTaGCATCAATATTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: SVRLPRDQAALARTFRDLRLVFK*HQYCIC
Trigger: GCAAATGCAATATTGATGTCACTTGAAGACAAGTCT...CAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR TCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCTGGTGTTTCCATGTTaGCAATCAGAGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVLVFPC*QSECLS
Trigger: TGACAGACACTCTGATTGTCAACATGGAAACACCAG...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGCTGGTGTTTCCATGTTaGCAATCAGAGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQLVFPC*QSECLS
Trigger: TGACAGACACTCTGATTGTCAACATGGAAACACCAG...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR TCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGAGGGTTGCAGAAAATaGAGCAAATTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKEGCRK*SKFPRA
Trigger: GGCCCTTGGAAATTTGCTTCATTTTCTGCAACCCTC...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGAGGGTTGCAGAAAATaGAGCAAATTTCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGEGCRK*SKFPRA
Trigger: GGCCCTTGGAAATTTGCTTCATTTTCTGCAACCCTC...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCACTCCAAAGGTGGTTaGGCCCTCTGTGAAAATTTA +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSHSKGG*ALCENL
Trigger: TAAATTTTCACAGAGGGCTCAACCACCTTTGGAGTG...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCACGAACCGACAACTTaGACAGCAGCCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKHEPTT*TAAIFS
Trigger: AGAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAATTAAGAGTCCGGTGTTaGCTAGCAGCTCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ECVSVVYVSKGSPLKGLKLRVRC*LAALGG
Trigger: ACCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAA...TTTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR GCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTGCCATACAATGTACTaGAGCTCTCCTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESCHTMY*SSPDFR
Trigger: CCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCA...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCGCACTGGATTCTGATTaGTGTGGTTTGATAGGTGTT +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIALDSD*CGLIGV
Trigger: AACACCTATCAAACCACAGCAATCAGAATCCAGTGC...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGATGGCAGATAAAACTTaGAGAGCACAGGCACGTGTC +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKMADKT*RAQARV
Trigger: GACACGTGCCTGTGCTCTGCAAGTTTTATCTGCCAT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGAAGAACATGGCTGTTaGAGAAGTAGTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGEEHGC*RSSWTS
Trigger: TGAAGTCCAACTACTTCTGCAACAGCCATGTTCTTC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGAGGGGTTGCTGAATTaGTATTACCGAGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKEGLLN*YYRVQK
Trigger: CTTCTGGACTCGGTAATAGCAATTCAGCAACCCCTC...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGCTGTATTAAGCCTGTaGCCAGTTCTTCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKAVLSL*PVLPEA
Trigger: AGCTTCTGGAAGAACTGGGCACAGGCTTAATACAGC...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATTGCTCTCTGATCAGGTaGTGCAGTGGAGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYCSLIR*CSGVWF
Trigger: AAACCAGACTCCACTGCAGCACCTGATCAGAGAGCA...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGCACCAAGAAGACTGGTaGTCTCTGATCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVYVHPQCCREENQHTVGHQEDW*SLIRCC
Trigger: GCAGCACCTGATCAGAGAGCACCAGTCTTCTTGGTG...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTTCACTAAGCGATTCTTaGTGTCATTCAGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGSLSDS*CHSARA
Trigger: TGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGA...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAATCACTAAGCGATTCTTaGTGTCATTCAGCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLESLSDS*CHSARA
Trigger: TGCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGA...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATGCATTTGCTGCGTCTaGAACAAATATGACATCCTG +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGCICCV*NKYDIL
Trigger: CAGGATGTCATATTTGTTGCAGACGCAGCAAATGCA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAGGGCCCGGACTGCATTaGTTTTTACCTTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRGPGLH*FLPCLY
Trigger: ATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCC...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGAGGTTTTTCTGAGACTAAATaGCCTCAAAGCCCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LEGPACWELTLVIGLWGGFSETK*PQSPSA
Trigger: AGCAGACGGGCTTTGAGGGCATTTAGTCTCAGAAAA...ACCTCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAACTGCAGCTCTGCTTaGAGCTTGCTAGAAATACAA +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGINCSSA*SLLEIQ
Trigger: TTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCAGTT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp AGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAACCAGTCGGCAAGCCTaGACAAGAAGAGCACTAACG +
Preference number: 4 (lower is better)
Translates to: RVCVCRLCVKRITSKGPETSRQA*TRRALT
Trigger: CGTTAGTGCTCTTCTTGTCCAGGCTTGCCGACTGGT...TTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR CCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAAATGGTGGATAAGCTaGCTCACTTTGCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIKWWIS*LTLLTR
Trigger: TCTTGTCAGCAAAGTGAGCCAGCTTATCCACCATTT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCTGTTAAGTAAATGGTaGATAAGCTGGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGLLSKW*ISWLTL
Trigger: CAAAGTGAGCCAGCTTATCCACCATTTACTTAACAG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTTTGGTCGAGAAGCACTaGATTCTGATTGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSLVEKH*ILIAVV
Trigger: AACCACAGCAATCAGAATCCAGTGCTTCTCGACCAA...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGTTGGTCGAGAAGCACTaGATTCTGATTGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVLVEKH*ILIAVV
Trigger: AACCACAGCAATCAGAATCCAGTGCTTCTCGACCAA...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCCTCTATTTCACCACTaGATTCCTTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NPTDLMLKLRSSYCRLRHPLFHH*IPFPPP
Trigger: AGGAGGAGGAAAAGGAATCCAGTGGTGAAATAGAGG...ATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGTAAAAGCCCTTCTGTaGTCACTGGTATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVVKALL*SLVSSA
Trigger: TGCTGAAGATACCAGTGACCACAGAAGGGCTTTTAC...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTTGTTGCAGAAGTAGTTaGACTTCAGGTAAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSCCRSS*TSGKGA
Trigger: CGCACCTTTACCTGAAGTCCAACTACTTCTGCAACA...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGATCAGGTGCTGCAGTaGAGTCTGGTTTATACTGCT +
Preference number: 4 (lower is better)
Translates to: WTIFPLSSRVSFIQGRSEDQVLQ*SLVYTA
Trigger: AGCAGTATAAACCAGACTCCACTGCAGCACCTGATC...CTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp GTGGACACTATAGCTCCCAAGAGTGTGAGACTTGACACACGAACATTAACATCTGGGACCAGGCTGCTTTaGCTCGAACATTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: VDTIAPKSVRLDTRTLTSGTRLL*LEHSET
Trigger: AGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCC...AGATGTTAATGTTCGTGTGTCAAGTCTCACACTCTTGGGAGCTATAGTGTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGAGGTCTCTTCCTGGAAACTTaGGTCTGGTGTTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: LEGPACWELTLVIGLWGGLFLET*VWCFHV
Trigger: AACATGGAAACACCAGACCCAAGTTTCCAGGAAGAG...ACCTCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCTCTTCCTGGAAACTTaGGTCTGGTGTTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSLFLET*VWCFHV
Trigger: AACATGGAAACACCAGACCCAAGTTTCCAGGAAGAG...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATCCATCGGACTTTCATaGCAGCTTCTGTTAGAACAG +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRSIGLS*QLLLEQ
Trigger: CTGTTCTAACAGAAGCTGCCATGAAAGTCCGATGGA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGTGGGCCAGGACAAACTaGCTGAACTGCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLWARTN*LNCSSA
Trigger: AGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCA...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp CCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGATCTCTTCTAAAAAGCCCTCTGGGAGGTACTTTTaGCATTTGGAGCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: PCDPDESKQTARISSKKPSGRYF*HLEPLQ
Trigger: CTGCAATGGCTCCAAATGTCAAAAGTACCTCCCAGA...GGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATACTTCAGGATCAGACTaGGCCAAGTCACTCAACTTC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYTSGSD*AKSLNF
Trigger: GAAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGTCCGTGAAACATaGATTTCTTTAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVGVRET*ISLAQL
Trigger: TAGCTGTGCTAAAGAAATTCATGTTTCACGGACTCC...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAGAAGCACTGGATTCTaGTTGCTGTGGTTTGATAGG +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKRSTGF*LLWFDR
Trigger: CCTATCAAACCACAGCAATCAGAATCCAGTGCTTCT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAAGCACTGGATTCTaGTTGCTGTGGTTTGATAGG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLERSTGF*LLWFDR
Trigger: CCTATCAAACCACAGCAATCAGAATCCAGTGCTTCT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATTCCAACTGGAAGAACTaGAGGATGAGGAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYSNWKN*RMRRLH
Trigger: ATGGAGTCTCCTCATCCTTCAGTTCTTCCAGTTGGA...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGCTGACTCACTACTGCTaGCCCTTTTCCAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LVYVHPQCCREENQHTVGLTHYC*PFSNWK
Trigger: CTTCCAGTTGGAAAAGGGTCAGCAGTAGTGAGTCAG...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GCCCCTAAGATGAAATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGAGAAAGAAACTGCTTTaGGCCTTCCAAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: APKMKSHRSYAQAQVFLLRKKLL*AFQDGR
Trigger: TCTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCT...CAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATTTCATCTTAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTAGGCACTTAATTATCTaGGTAACGGTCTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSRHLII*VTVCED
Trigger: ATCCTCACAGACCGTTACTCAGATAATTAAGTGCCT...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCTTTGGTCAGCAGGCTaGGTTTTAGACGATCATAAG +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKLWSAG*VLDDHK
Trigger: CTTATGATCGTCTAAAACTCAGCCTGCTGACCAAAG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGGTAGGCTTGAGTCATTaGAAAGTAGCCCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVYVHPQCCREENQHTVGVGLSH*KVAPCQ
Trigger: CTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTAC...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp CACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCAGACTTGTCTTCAAGTaGCATCAATATTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: HSVQGFLSYKGGPRHWPSRLVFK*HQYCIC
Trigger: GCAAATGCAATATTGATGTCACTTGAAGACAAGTCT...GCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAACTGGTGTTTCCATGTTaGCAATCAGAGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLELVFPC*QSECLS
Trigger: TGACAGACACTCTGATTGTCAACATGGAAACACCAG...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAATTTGAAGTTCTTGCATaGTGTCACGACCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEFEVLA*CHDRCQ
Trigger: CTGACATCGGTCGTGACATCATGCAAGAACTTCAAA...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATTCTTCTGTAAAGCGGTaGCCAATGCATTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYSSVKR*PMHSRS
Trigger: GGATCTGGAATGCATTGGTCACCGCTTTACAGAAGA...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATTGGTGGGATCTTCACTaGTTTGTTAACCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYWWDLH*FVNPGS
Trigger: ACTCCCAGGGTTAACAAATCAGTGAAGATCCCACCA...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAAGTTAGAGGCGAAACCCATTaGCTCGCTCAGGGATTGCTT +
Preference number: 4 (lower is better)
Translates to: CVSVVYVSKGSPLKGLKVRGETH*LAQGLL
Trigger: AAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCT...AACTTTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR GCA 90 bp ACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTGAATCAAGCTGTATAAAAGCAGGTGGATCTCGGTaGGGGCGGAGCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TGNPSAVHQQLPESSCIKAGGSR*GRSCCH
Trigger: ATGACAGCAGCTCCGCCCGCACCGAGATCCACCTGC...TTTTATACAGCTTGATTCAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR GCA 90 bp AAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCCAGTTAAGAGTCCGGTGTTaGCTAGCAGCTCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KKSMVSSLFCKAVTNAFQLRVRC*LAALGG
Trigger: ACCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAA...CTGGAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp GAGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTTGCCATACAATGTACTaGAGCTCTCCTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: ERVCVCRLCVKRITSKGPCHTMY*SSPDFR
Trigger: CCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCA...AGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR GCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTCATTTTACTCTGCATaGCTCCTTCAGCATCAGAAA +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGISFYSA*LLQHQK
Trigger: TTTCTGATGCTGAAGGAGGCATGCAGAGTAAAATGA...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGACCTCATTTTACTCTaGATGCCTCCTTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEDLILL*MPPSAS
Trigger: TGATGCTGAAGGAGGCATGCAGAGTAAAATGAGGTC...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTGACCTCATTTTACTCTaGATGCCTCCTTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESDLILL*MPPSAS
Trigger: TGATGCTGAAGGAGGCATGCAGAGTAAAATGAGGTC...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATATGGCAGATAAAACTTaGAGAGCACAGGCACGTGTC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYMADKT*RAQARV
Trigger: GACACGTGCCTGTGCTCTGCAAGTTTTATCTGCCAT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGATCTCTTCTAAAAAGCCCATGGCAGATAAAACTTaGAGAGCACAGGCACGTGTC +
Preference number: 4 (lower is better)
Translates to: PCDPDESKQTARISSKKPMADKT*RAQARV
Trigger: GACACGTGCCTGTGCTCTGCAAGTTTTATCTGCCAT...GGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACGAAGAACATGGCTGTTaGAGAAGTAGTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: PYSHSVQGFLSYKGGPRHEEHGC*RSSWTS
Trigger: TGAAGTCCAACTACTTCTGCAACAGCCATGTTCTTC...GTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TGCACTTGCAAATCACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAAGATCTGCTTCCCCCATaGACTTGCAAATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: CTCKSPLQAPSSRLESLKDLLPP*TCKSPL
Trigger: GAGAGGTGATTTGCAAGTGCATGGGGGAAGCAGATC...TTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTGATTTGCAAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCCTTGGAGGGTGTTCTGAATTCTaGAGGGCTCTGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: QISKGPDCIAFYLVFILGGCSEF*RALGKG
Trigger: TCCTTTACCCAGAGCCCTGCAGAATTCAGAACACCC...TCCAAGGATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGGGGCCCGGACTGCATTaGTTTTTACCTTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPGPGLH*FLPCLY
Trigger: ATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCC...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTATCCCACAGATCTTATaGTCAAGCTCAGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGIPQIL*SSSGLP
Trigger: AGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGAT...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATCACAGCAGGTACCACTaGCTTCTGAAGTTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYHSRYH*LLKFLE
Trigger: CTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTG...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp GCCCCTAAGATGAAATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGGTACACCCACAATGCTaGAGAGAAGAGAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: APKMKSHRSYAQAQVFLLVHPQC*REENQH
Trigger: ATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTAC...CAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATTTCATCTTAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCCTCTATTTCACCACTaGATTCCTTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKPLFHH*IPFPPP
Trigger: AGGAGGAGGAAAAGGAATCCAGTGGTGAAATAGAGG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAACCTCTATTTCACCACTaGATTCCTTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEPLFHH*IPFPPP
Trigger: AGGAGGAGGAAAAGGAATCCAGTGGTGAAATAGAGG...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAACAGGCACGTGTCTTTaGAGAAGGGTCTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLETGTCL*RRVFQC
Trigger: ACATTGAAAGACCCTTCTCCAAAGACACGTGCCTGT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATTGAGCCTTCCAAGATaGCAGATAAAACTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRLSLPR*QIKLAE
Trigger: CTCTGCAAGTTTTATCTGCCATCTTGGAAGGCTCAA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCATTGAGCCTTCCAAGATaGCAGATAAAACTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FLSYKGGPRHWPSSRGESLSLPR*QIKLAE
Trigger: CTCTGCAAGTTTTATCTGCCATCTTGGAAGGCTCAA...TGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGTGTTGCAGAAGTAGTTaGACTTCAGGTAAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: WTIFPLSSRVSFIQGRSECCRSS*TSGKGA
Trigger: CGCACCTTTACCTGAAGTCCAACTACTTCTGCAACA...CTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAATGTTGCAGAAGTAGTTaGACTTCAGGTAAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLECCRSS*TSGKGA
Trigger: CGCACCTTTACCTGAAGTCCAACTACTTCTGCAACA...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTAACAGGAATCCTCCTTaGGCAGTACGACAATGGAAA +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESNRNPP*AVRQWK
Trigger: TTTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTT...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAACAGGAATCCTCCTTaGGCAGTACGACAATGGAAA +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLENRNPP*AVRQWK
Trigger: TTTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGCACCACCAAGAAGACTaGTGCTCTCTGATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLHHQED*CSLIRC
Trigger: GCACCTGATCAGAGAGCACCAGTCTTCTTGGTGGTG...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp ATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGCTCTTCCTGGAAACTTaGGTCTGGTGTTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: IFPLSSRVSFIQGRSEALLFLET*VWCFHV
Trigger: AACATGGAAACACCAGACCCAAGTTTCCAGGAAGAG...CAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTGTCTTTATTGTCAGTaGCTTCCTTTCCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESCLYCQ*LPFPTA
Trigger: TGCTGTGGGGAAAGGAAGCCACTGACAATAAAGACA...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR CAA 72 bp TCACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATaGAAAAGTAGCCCCTTGCCAGAAGAGTCAATACCT +
Preference number: 4 (lower is better)
Translates to: SPLQAPSSRLES*KSSPLPEESIP
Trigger: AGGTATTGACTCTTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 72 bp AGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTaGTCTTCAAGTGACATCAATATTGCATTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RDQAALARTFRD*SSSDINIAFAA
Trigger: CGCAGCAAATGCAATATTGATGTCACTTGAAGACAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TACGGCTGTCCTGGCACACTGAGACATAAGTTTGCCATACAATGTACTGCAGCTGGAGTCCGTGAAACATaGATTTCTTTAGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: YGCPGTLRHKFAIQCTAAGVRET*ISLAQL
Trigger: TAGCTGTGCTAAAGAAATTCATGTTTCACGGACTCC...AGCTGCAGTACATTGTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGCCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR TCA 90 bp GAGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTAGTCCAGGGAGTCCGTaGAACATGAATTTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: ERVCVCRLCVKRITSKGPSPGSP*NMNFFS
Trigger: GCTAAAGAAATTCATGTTTCACGGACTCCCTGGACT...AGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGAAGAACTGAAGGATaGGGAGACTCCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYGRTEG*GDSIFF
Trigger: GAAAAAGATGGAGTCTCCTCATCCTTCAGTTCTTCC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAATCAGGAATAAAAGCTaGCCAGTAGCCATAAAGAAC +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRIRNKS*PVAIKN
Trigger: GTTCTTTATGGCTACTGGTCAGCTTTTATTCCTGAT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGCACTTAATTATCTaGGTAACGGTCTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLERHLII*VTVCED
Trigger: ATCCTCACAGACCGTTACTCAGATAATTAAGTGCCT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCAAGAGTGTGAGACTTaGCACACGAACATTAACATC +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKQECET*HTNINI
Trigger: GATGTTAATGTTCGTGTGTCAAGTCTCACACTCTTG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAACAAGAGTGTGAGACTTaGCACACGAACATTAACATC +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEQECET*HTNINI
Trigger: GATGTTAATGTTCGTGTGTCAAGTCTCACACTCTTG...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp TGCATTTGCTGCGTCTGCAACAAATATGACATCCTGTCTGAGACAGGGAAAAAGTCTTCTGTAAAGCGGTaGCCAATGCATTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: CICCVCNKYDILSETGKKSSVKR*PMHSRS
Trigger: GGATCTGGAATGCATTGGTCACCGCTTTACAGAAGA...CTTTTTCCCTGTCTCAGACAGGATGTCATATTTGTTGCAGACGCAGCAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp GTGGACACTATAGCTCCCAAGAGTGTGAGACTTGACACACGAACATTAACATCTCACGAACCGACAACTTaGACAGCAGCCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VDTIAPKSVRLDTRTLTSHEPTT*TAAIFS
Trigger: AGAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTG...AGATGTTAATGTTCGTGTGTCAAGTCTCACACTCTTGGGAGCTATAGTGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTAGCCGAAATAGTATATaGCAACAGGAAATCCAAGTG +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSSRNSI*QQEIQV
Trigger: CACTTGGATTTCCTGTTGGCATATACTATTTCGGCT...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTAACAGGACAGGAGACATTTGGAGCCATTaGAGTACACCAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MPTGNPSAVHQQLPNRTGDIWSH*STPELP
Trigger: TGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTC...TCCTGTCCTGTTAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR GCA 90 bp CAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCCTTGGATGCCATACAATGTACTaGAGCTCTCCTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: QISKGPDCIAFYLVFILGCHTMY*SSPDFR
Trigger: CCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCA...TCCAAGGATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGCACTGGATTCTGATTaGTGTGGTTTGATAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKALDSD*CGLIGV
Trigger: AACACCTATCAAACCACAGCAATCAGAATCCAGTGC...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTGCACTGGATTCTGATTaGTGTGGTTTGATAGGTGTT +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESALDSD*CGLIGV
Trigger: AACACCTATCAAACCACAGCAATCAGAATCCAGTGC...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGACCTCATTTTACTCTaGATGCCTCCTTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYDLILL*MPPSAS
Trigger: TGATGCTGAAGGAGGCATGCAGAGTAAAATGAGGTC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGAAGAACATGGCTGTTaGAGAAGTAGTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMEEHGC*RSSWTS
Trigger: TGAAGTCCAACTACTTCTGCAACAGCCATGTTCTTC...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGAGTCTGGTTTATACTaGTGTATTAAGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYESGLY*CIKPVP
Trigger: GGGCACAGGCTTAATACAGCAGTATAAACCAGACTC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TTGCCAGAAGAGTCAATACCTGTAAGGCCTCCAGTCGCATGGGGGATGGTTCGTCATCAATATTGCATTTaGTGCGTCTGCAACAAATAT +
Preference number: 4 (lower is better)
Translates to: LPEESIPVRPPVAWGMVRHQYCI*CVCNKY
Trigger: ATATTTGTTGCAGACGCAGCAAATGCAATATTGATG...ACGAACCATCCCCCATGCGACTGGAGGCCTTACAGGTATTGACTCTTCTGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGGCCCGGACTGCATTaGTTTTTACCTTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYGPGLH*FLPCLY
Trigger: ATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCAAATACATTTCCCATTaGATAACAAGCATTCCATCG +
Preference number: 4 (lower is better)
Translates to: HSVQGFLSYKGGPRHWPSKYISH*ITSIPS
Trigger: CGATGGAATGCTTGTTATGCAATGGGAAATGTATTT...GCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR GCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGTATGTACACCCACAATaGTGCAGAGAAGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMYVHPQ*CREENQ
Trigger: CTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATA...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTAAATGGTGGATAAGCTaGCTCACTTTGCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGKWWIS*LTLLTR
Trigger: TCTTGTCAGCAAAGTGAGCCAGCTTATCCACCATTT...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGTTGGGTATAACACCGTaGGCATCTCTATGTTTAGTC +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMLGITP*ASLCLV
Trigger: GACTAAACATAGAGATGCCCACGGTGTTATACCCAA...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGTTGGGTATAACACCGTaGGCATCTCTATGTTTAGTC +
Preference number: 4 (lower is better)
Translates to: IFPLSSRVSFIQGRSEALLGITP*ASLCLV
Trigger: GACTAAACATAGAGATGCCCACGGTGTTATACCCAA...CAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTTTGGGTATAACACCGTaGGCATCTCTATGTTTAGTC +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGLGITP*ASLCLV
Trigger: GACTAAACATAGAGATGCCCACGGTGTTATACCCAA...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCTTTTTATTCAAAGTTaGTCGAGAAGCACTGGATTC +
Preference number: 4 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGILFIQS*SRSTGF
Trigger: GAATCCAGTGCTTCTCGACCAACTTTGAATAAAAAG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ACGACAATGGAAATGCAGAGTCGAATGAGCCAGCAGGGCTCTGAAGACCCCTTACTTTTTATTCAAAGTTaGTCGAGAAGCACTGGATTC +
Preference number: 4 (lower is better)
Translates to: TTMEMQSRMSQQGSEDPLLFIQS*SRSTGF
Trigger: GAATCCAGTGCTTCTCGACCAACTTTGAATAAAAAG...TAAGGGGTCTTCAGAGCCCTGCTGGCTCATTCGACTCTGCATTTCCATTGTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATACAGGCACGTGTCTTTaGAGAAGGGTCTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYTGTCL*RRVFQC
Trigger: ACATTGAAAGACCCTTCTCCAAAGACACGTGCCTGT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGTTGAGCCTTCCAAGATaGCAGATAAAACTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMLSLPR*QIKLAE
Trigger: CTCTGCAAGTTTTATCTGCCATCTTGGAAGGCTCAA...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TGCATTTGCTGCGTCTGCAACAAATATGACATCCTGTCTGAGACAGGGAAAAAGATGAAGCTGAATGGATaGATCTGCTTCCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: CICCVCNKYDILSETGKKMKLNG*ICFPHA
Trigger: TGCATGGGGGAAGCAGATCCATCCATTCAGCTTCAT...CTTTTTCCCTGTCTCAGACAGGATGTCATATTTGTTGCAGACGCAGCAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTAGGGAACATTCAATATaGGTGTCTTTGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESREHSI*VSLLCL
Trigger: CAAGCACAGCAAAGACACCCATATTGAATGTTCCCT...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR CAA 72 bp AGGACAAACTGGCTGAACTGCAGCTCTGCTTGCAGCTaGCTAGAAATACAACTTGGTAACAACAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: RTNWLNCSSACS*LEIQLGNNRRL
Trigger: CAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GGAACTACACTGATGAATAGCCGAAATAGTATATGCCAACAGGAAATCCAAGTGGCTGTCCTGGCACACTaGGACATAAGTTTGCCATAC +
Preference number: 4 (lower is better)
Translates to: GTTLMNSRNSICQQEIQVAVLAH*DISLPY
Trigger: GTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGC...CACTTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR TCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGAGTCCAGGGAGTCCGTaGAACATGAATTTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LVYVHPQCCREENQHTVGSPGSP*NMNFFS
Trigger: GCTAAAGAAATTCATGTTTCACGGACTCCCTGGACT...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAATCAGGAATAAAAGCTaGCCAGTAGCCATAAAGAAC +
Preference number: 4 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEIRNKS*PVAIKN
Trigger: GTTCTTTATGGCTACTGGTCAGCTTTTATTCCTGAT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGATCTCTTCTAAAAAGCCCAGGCACTTAATTATCTaGGTAACGGTCTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PCDPDESKQTARISSKKPRHLII*VTVCED
Trigger: ATCCTCACAGACCGTTACTCAGATAATTAAGTGCCT...GGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CATCGGACTTTCATGGCAGCTTCTGTTAGAACAGTAGAAATTAGGGCCTGGATACTTTGGTCAGCAGGCTaGGTTTTAGACGATCATAAG +
Preference number: 4 (lower is better)
Translates to: HRTFMAASVRTVEIRAWILWSAG*VLDDHK
Trigger: CTTATGATCGTCTAAAACTCAGCCTGCTGACCAAAG...TATCCAGGCCCTAATTTCTACTGTTCTAACAGAAGCTGCCATGAAAGTCCGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGAGACTTGTCTTCAAGTaGCATCAATATTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVRLVFK*HQYCIC
Trigger: GCAAATGCAATATTGATGTCACTTGAAGACAAGTCT...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGACTTGTCTTCAAGTaGCATCAATATTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRRLVFK*HQYCIC
Trigger: GCAAATGCAATATTGATGTCACTTGAAGACAAGTCT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp CATCGGACTTTCATGGCAGCTTCTGTTAGAACAGTAGAAATTAGGGCCTGGATATTTGAAGTTCTTGCATaGTGTCACGACCGATGTCAG +
Preference number: 4 (lower is better)
Translates to: HRTFMAASVRTVEIRAWIFEVLA*CHDRCQ
Trigger: CTGACATCGGTCGTGACATCATGCAAGAACTTCAAA...TATCCAGGCCCTAATTTCTACTGTTCTAACAGAAGCTGCCATGAAAGTCCGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAGCCGAAATAGTATATaGCAACAGGAAATCCAAGTG +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKSRNSI*QQEIQV
Trigger: CACTTGGATTTCCTGTTGGCATATACTATTTCGGCT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGCCGAAATAGTATATaGCAACAGGAAATCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPSRNSI*QQEIQV
Trigger: CACTTGGATTTCCTGTTGGCATATACTATTTCGGCT...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CCAGGAACTACACTGATGAATAGCCGAAATAGTATATGCCAACAGGAAATCCAAGCAGTACACCAGAGCTaGCAGGGCTTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: PGTTLMNSRNSICQQEIQAVHQS*QGLKNF
Trigger: GAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGC...TTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGTTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR GCA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGTGCCATACAATGTACTaGAGCTCTCCTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLCHTMY*SSPDFR
Trigger: CCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCA...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp GCCCCTAAGATGAAATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGTCATTTTACTCTGCATaGCTCCTTCAGCATCAGAAA +
Preference number: 4 (lower is better)
Translates to: APKMKSHRSYAQAQVFLLSFYSA*LLQHQK
Trigger: TTTCTGATGCTGAAGGAGGCATGCAGAGTAAAATGA...CAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATTTCATCTTAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTCATTTTACTCTGCATaGCTCCTTCAGCATCAGAAA +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESSFYSA*LLQHQK
Trigger: TTTCTGATGCTGAAGGAGGCATGCAGAGTAAAATGA...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAACAAAAGACATCTGTaGAACTCTCTAATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRNKRHL*NSLMLQ
Trigger: TTGCAGCATTAGAGAGTTGCACAGATGTCTTTTGTT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATTGCATTTGCTGCGTCTaGAACAAATATGACATCCTG +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYCICCV*NKYDIL
Trigger: CAGGATGTCATATTTGTTGCAGACGCAGCAAATGCA...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CATCTCCCTCTGCTCCTGATTTTAAAAACTGTAGAATATAGGACTGGACCATATCAAGAGGTGAATCAGTaGCTGGCAGATTTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: HLPLLLILKTVEYRTGPYQEVNQ*LADLGP
Trigger: CGGACCCAAATCTGCCAGGCACTGATTCACCTCTTG...ATATGGTCCAGTCCTATATTCTACAGTTTTTAAAATCAGGAGCAGAGGGAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR GCA 90 bp GCCCCTAAGATGAAATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCAATATGGGTGTCTTTaGTGTGCTTGCAGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: APKMKSHRSYAQAQVFLLQYGCL*CACSLN
Trigger: ATTAAGACTGCAAGCACAGCAAAGACACCCATATTG...CAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATTTCATCTTAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATAAATGGTGGATAAGCTaGCTCACTTTGCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYKWWIS*LTLLTR
Trigger: TCTTGTCAGCAAAGTGAGCCAGCTTATCCACCATTT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAATGGTGGATAAGCTaGCTCACTTTGCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: RECVSVVYVSKGSPLKGLKWWIS*LTLLTR
Trigger: TCTTGTCAGCAAAGTGAGCCAGCTTATCCACCATTT...CAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590587.1
ENST00000592664.1
CDS-3UTR CCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTCTGTTAAGTAAATGGTaGATAAGCTGGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGLLSKW*ISWLTL
Trigger: CAAAGTGAGCCAGCTTATCCACCATTTACTTAACAG...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTAATCTGTTAAGTAAATaGTGGATAAGCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSNLLSK*WISWLT
Trigger: AGTGAGCCAGCTTATCCACCATTTACTTAACAGATT...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTAGAAATTAGGGCCTaGATAGACTCCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMVEIRA*IDSSMI
Trigger: AATCATTGAGGAGTCTATCCAGGCCCTAATTTCTAC...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGTAGAAATTAGGGCCTaGATAGACTCCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGVEIRA*IDSSMI
Trigger: AATCATTGAGGAGTCTATCCAGGCCCTAATTTCTAC...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGTAGAAATTAGGGCCTaGATAGACTCCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKVEIRA*IDSSMI
Trigger: AATCATTGAGGAGTCTATCCAGGCCCTAATTTCTAC...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAATTCCAATAAATCGTTaGTGCTCAGTAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGIPINR*CSVEKC
Trigger: GCATTTTTCTACTGAGCACCAACGATTTATTGGAAT...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATAGGTACTTTGACATTTaGAGCCATTGCAGTACACCA +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYRYFDI*SHCSTP
Trigger: TGGTGTACTGCAATGGCTCCAAATGTCAAAGTACCT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613428.4
CDS-3UTR TCA 90 bp ACTACACTGATGAATAGCCGAAATAGTATATGCCAACAGGAAATCCAAGTGCTGACTTCAGGATCAGACTaGGCCAAGTCACTCAACTTC +
Preference number: 4 (lower is better)
Translates to: TTLMNSRNSICQQEIQVLTSGSD*AKSLNF
Trigger: GAAGTTGAGTGACTTGGCTCAGTCTGATCCTGAAGT...CAGCACTTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR TCA 90 bp CGTAGGCTGACACAGTACTTGAATTCCAAAAAGTCTATGGTGTCTTCACTCTTCCTGGTGTTTCCATGTTaGCAATCAGAGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RRLTQYLNSKKSMVSSLFLVFPC*QSECLS
Trigger: TGACAGACACTCTGATTGTCAACATGGAAACACCAG...GAAGAGTGAAGACACCATAGACTTTTTGGAATTCAAGTACTGTGTCAGCCTACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR TCA 90 bp TGCAGCTCTGCTTGCAGCTTGCTAGAAATACAACTTGGTAACAACAGGAGATTGTTTCTGCCCCTAAGATaGAATCCCACAGATCTTATG +
Preference number: 4 (lower is better)
Translates to: CSSACSLLEIQLGNNRRLFLPLR*NPTDLM
Trigger: CATAAGATCTGTGGGATTTCATCTTAGGGGCAGAAA...CAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp TTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGTCCTTTAGTGTATGTACATCAAATGAAACCATaGGGCCACTTCACAAATATT +
Preference number: 4 (lower is better)
Translates to: LWRHVPRHMRSFCPLVYVHQMKP*GHFTNI
Trigger: AATATTTGTGAAGTGGCCTCATGGTTTCATTTGATG...TACATACACTAAAGGACAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTGTTTTCCTGCACATaGACATTAACATCCACATCA +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKLFSCT*TLTSTS
Trigger: TGATGTGGATGTTAATGTTCATGTGCAGGAAAACAA...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GAGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTCTTGTAACTTTTCCTTaGACTAACCAGACATTGGCA +
Preference number: 4 (lower is better)
Translates to: ERVCVCRLCVKRITSKGPLVTFP*TNQTLA
Trigger: TGCCAATGTCTGGTTAGTTCAAGGAAAAGTTACAAG...AGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590587.1
ENST00000592664.1
CDS-3UTR GCA 90 bp AAATGCCAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATAGAGGCGAAACCCATTaGCTCGCTCAGGGATTGCTT +
Preference number: 4 (lower is better)
Translates to: KCQEATTKNVFKRRKFQDRGETH*LAQGLL
Trigger: AAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCT...ATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTGGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAACAAAAGACATCTGTaGAACTCTCTAATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKNKRHL*NSLMLQ
Trigger: TTGCAGCATTAGAGAGTTGCACAGATGTCTTTTGTT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGAACAAAAGACATCTGTaGAACTCTCTAATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMNKRHL*NSLMLQ
Trigger: TTGCAGCATTAGAGAGTTGCACAGATGTCTTTTGTT...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTCATCAGACGGAAAGGGCAGCTaGAGATCTGATGCGCACTTT +
Preference number: 4 (lower is better)
Translates to: QEATTKNVFKRRKFQDSSDGKGS*RSDAHF
Trigger: AAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTC...TGATGAATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAATCTGTTAAGTAAATaGTGGATAAGCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKNLLSK*WISWLT
Trigger: AGTGAGCCAGCTTATCCACCATTTACTTAACAGATT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp TCCAAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCTTGGTCGAGAAGCACTaGATTCTGATTGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SKKSMVSSLFCKAVTNAFLVEKH*ILIAVV
Trigger: AACCACAGCAATCAGAATCCAGTGCTTCTCGACCAA...GAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCTTTTTATTCAAAGTTaGTCGAGAAGCACTGGATTC +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKLFIQS*SRSTGF
Trigger: GAATCCAGTGCTTCTCGACCAACTTTGAATAAAAAG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp ATGAAGCAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCCCTCTATTTCACCACTaGATTCCTTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: MKQISKGPDCIAFYLVFIPLFHH*IPFPPP
Trigger: AGGAGGAGGAAAAGGAATCCAGTGGTGAAATAGAGG...GATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTGCTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TCCAAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCACAGGCACGTGTCTTTaGAGAAGGGTCTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: SKKSMVSSLFCKAVTNAFTGTCL*RRVFQC
Trigger: ACATTGAAAGACCCTTCTCCAAAGACACGTGCCTGT...GAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp AAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCCAGGTAAAAGCCCTTCTGTaGTCACTGGTATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KKSMVSSLFCKAVTNAFQVKALL*SLVSSA
Trigger: TGCTGAAGATACCAGTGACCACAGAAGGGCTTTTAC...CTGGAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp CAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTCATCATCAGGTAAAGGTGCGTaGGTGGACACTATAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QEATTKNVFKRRKFQDSSSGKGA*VDTIAP
Trigger: GGGAGCTATAGTGTCCACCCACGCACCTTTACCTGA...TGATGAATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAATTCCAAAAAGTCTATaGTGTCTTCACTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRIPKSL*CLHSSV
Trigger: TACAGAAGAGTGAAGACACCATAGACTTTTTGGAAT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTCATCAGCCATTCTGACCATCTaGTCTCTTTCCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QEATTKNVFKRRKFQDSSAILTI*SLSCGL
Trigger: CAGCCCACAGGAAAGAGACCAGATGGTCAGAATGGC...TGATGAATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCATATATTTAGTGTGTaGGATCACATTCTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVHIFSV*DHILLK
Trigger: CTTTAGGAGAATGTGATCCCACACACTAAATATATG...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
3UTR CAA 72 bp CTGTGTGCTGATTTTCATCAGCTTAAGTTGTCTTTATaGTCAGTGGCTTCCTTTCCCCACAGCAGCTTTATG +
Preference number: 4 (lower is better)
Translates to: LCADFHQLKLSL*SVASFPHSSFM
Trigger: CATAAAGCTGCTGTGGGGAAAGGAAGCCACTGACAATAAAGACAACTTAAGCTGATGAAAATCAGCACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp TTCTGCAAATGTGGGTTTTTCTATATGAGAGGGTTGCAGAAAATGAAGCAAATTTTCTCGGAGATGAGCTaGTCGAAGAGCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: FCKCGFFYMRGLQKMKQIFSEMS*SKSRWI
Trigger: GATCCACCTGCTCTTCGATCAGCTCATCTCCGAGAA...AATTTGCTTCATTTTCTGCAACCCTCTCATATAGAAAAACCCACATTTGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TTCTGCAAATGTGGGTTTTTCTATATGAGAGGGTTGCAGAAAATGAAGCAAATTGTTCGCCCATCATACTaGGGAAGCGGAGTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: FCKCGFFYMRGLQKMKQIVRPSY*GSGVGY
Trigger: ATACCCAACTCCGCTTCCTCAGTATGATGGGCGAAC...AATTTGCTTCATTTTCTGCAACCCTCTCATATAGAAAAACCCACATTTGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TCTTTATCCTTGGATGCTTCTATAGCTGATCGTAACATTTTCAAGAGCAGGAGAAGCATCAGAAAAGTCTaGCTCACTACTGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: SLSLDASIADRNIFKSRRSIRKV*LTTADP
Trigger: AGGGTCAGCAGTAGTGAGTCAGACTTTTCTGATGCT...TCTCCTGCTCTTGAAAATGTTACGATCAGCTATAGAAGCATCCAAGGATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CGTAGGCTGACACAGTACTTGAATTCCAAAAAGTCTATGGTGTCTTCACTCTTCCAAGAGTGTGAGACTTaGCACACGAACATTAACATC +
Preference number: 4 (lower is better)
Translates to: RRLTQYLNSKKSMVSSLFQECET*HTNINI
Trigger: GATGTTAATGTTCGTGTGTCAAGTCTCACACTCTTG...GAAGAGTGAAGACACCATAGACTTTTTGGAATTCAAGTACTGTGTCAGCCTACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATAGACTTGTCTTCAAGTaGCATCAATATTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYRLVFK*HQYCIC
Trigger: GCAAATGCAATATTGATGTCACTTGAAGACAAGTCT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR TCA 90 bp GAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAACTTGTAACTTTTCCTTaGACTAACCAGACATTGGCA +
Preference number: 4 (lower is better)
Translates to: ECVSVVYVSKGSPLKGLKLVTFP*TNQTLA
Trigger: TGCCAATGTCTGGTTAGTTCAAGGAAAAGTTACAAG...TTTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590587.1
ENST00000592664.1
CDS-3UTR GCA 90 bp CCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTGAATCAAGCTGTATACACGAACCGACAACTTaGACAGCAGCCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PTGNPSAVHQQLPESSCIHEPTT*TAAIFS
Trigger: AGAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTG...TATACAGCTTGATTCAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR GCA 90 bp AAAAGGTGGCAAAACAACCATATATTTAGTGTGTGGGATCACATTCTCCTAAAGGCAGTACACCAGAGCTaGCAGGGCTTGAAGAATTTC +
Preference number: 4 (lower is better)
Translates to: KRWQNNHIFSVWDHILLKAVHQS*QGLKNF
Trigger: GAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGC...CTTTAGGAGAATGTGATCCCACACACTAAATATATGGTTGTTTTGCCACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TCTTTATCCTTGGATGCTTCTATAGCTGATCGTAACATTTTCAAGAGCAGGAGAGAGGGGTTGCTGAATTaGTATTACCGAGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLSLDASIADRNIFKSRREGLLN*YYRVQK
Trigger: CTTCTGGACTCGGTAATAGCAATTCAGCAACCCCTC...TCTCCTGCTCTTGAAAATGTTACGATCAGCTATAGAAGCATCCAAGGATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AAATGCCAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATCTGAATGGATGGATCTaGTTCCCCCATGCACTTGCA +
Preference number: 4 (lower is better)
Translates to: KCQEATTKNVFKRRKFQDLNGWI*FPHALA
Trigger: TGCAAGTGCATGGGGGAAGCAGATCCATCCATTCAG...ATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTGGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TCCAAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCTGCATTTGCTGCGTCTaGAACAAATATGACATCCTG +
Preference number: 4 (lower is better)
Translates to: SKKSMVSSLFCKAVTNAFCICCV*NKYDIL
Trigger: CAGGATGTCATATTTGTTGCAGACGCAGCAAATGCA...GAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCATCAATATTGCATTTaGTGCGTCTGCAACAAATAT +
Preference number: 4 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKHQYCI*CVCNKY
Trigger: ATATTTGTTGCAGACGCAGCAAATGCAATATTGATG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCATCAATATTGCATTTaGTGCGTCTGCAACAAATAT +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMHQYCI*CVCNKY
Trigger: ATATTTGTTGCAGACGCAGCAAATGCAATATTGATG...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGAAATACATTTCCCATTaGATAACAAGCATTCCATCG +
Preference number: 4 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMKYISH*ITSIPS
Trigger: CGATGGAATGCTTGTTATGCAATGGGAAATGTATTT...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTAAATACATTTCCCATTaGATAACAAGCATTCCATCG +
Preference number: 4 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGKYISH*ITSIPS
Trigger: CGATGGAATGCTTGTTATGCAATGGGAAATGTATTT...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTCCAATAAATCGTTGGTaGTCAGTAGAAAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESPINRW*SVEKCK
Trigger: TTTGCATTTTTCTACTGAGCACCAACGATTTATTGG...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp AAAAGGTGGCAAAACAACCATATATTTAGTGTGTGGGATCACATTCTCCTAAAGAATTCTGCAGGGCTCTaGGTAAAGGACCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KRWQNNHIFSVWDHILLKNSAGL*VKDRSA
Trigger: TGCTGAACGGTCCTTTACCCAGAGCCCTGCAGAATT...CTTTAGGAGAATGTGATCCCACACACTAAATATATGGTTGTTTTGCCACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATTCCAAAAAGTCTATaGTGTCTTCACTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESIPKSL*CLHSSV
Trigger: TACAGAAGAGTGAAGACACCATAGACTTTTTGGAAT...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CCA 90 bp CTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAAAGTAGCCCCTTGCCAGAAATTCCAAAAAGTCTATaGTGTCTTCACTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LQAPSSRLESLKSSPLPEIPKSL*CLHSSV
Trigger: TACAGAAGAGTGAAGACACCATAGACTTTTTGGAAT...TTCTGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587003.5
3UTR CAA 72 bp ATATTCTATCAATGGAAAATTGAGCCTTTAGTGAACTaGAATACCCTGTTCCCCAATCACTGCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: IFYQWKIEPLVN*NTLFPNHCPES
Trigger: GCTCTCTGGGCAGTGATTGGGGAACAGGGTATTCAAGTTCACTAAAGGCTCAATTTTCCATTGATAGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp ACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTGAATCAAGCTGTATAAAATGTAGTTCTCGGAGATaGGCTGATCGAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGNPSAVHQQLPESSCIKCSSRR*ADRRAG
Trigger: ACCTGCTCTTCGATCAGCTCATCTCCGAGAACTACA...TTTTATACAGCTTGATTCAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR TCA 90 bp GCATTGCTTTTTACCTTGTCTTTATCCTTGGATGCTTCTATAGCTGATCGTAACAGAAGCACTGGATTCTaGTTGCTGTGGTTTGATAGG +
Preference number: 4 (lower is better)
Translates to: ALLFTLSLSLDASIADRNRSTGF*LLWFDR
Trigger: CCTATCAAACCACAGCAATCAGAATCCAGTGCTTCT...GTTACGATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp GCATTGCTTTTTACCTTGTCTTTATCCTTGGATGCTTCTATAGCTGATCGTAACGGAAGAACTGAAGGATaGGGAGACTCCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: ALLFTLSLSLDASIADRNGRTEG*GDSIFF
Trigger: GAAAAAGATGGAGTCTCCTCATCCTTCAGTTCTTCC...GTTACGATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGATCAGGAATAAAAGCTaGCCAGTAGCCATAAAGAAC +
Preference number: 4 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLIRNKS*PVAIKN
Trigger: GTTCTTTATGGCTACTGGTCAGCTTTTATTCCTGAT...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp AAAAGGTGGCAAAACAACCATATATTTAGTGTGTGGGATCACATTCTCCTAAAGATGGCAGATAAAACTTaGAGAGCACAGGCACGTGTC +
Preference number: 4 (lower is better)
Translates to: KRWQNNHIFSVWDHILLKMADKT*RAQARV
Trigger: GACACGTGCCTGTGCTCTGCAAGTTTTATCTGCCAT...CTTTAGGAGAATGTGATCCCACACACTAAATATATGGTTGTTTTGCCACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp TTCTGCAAATGTGGGTTTTTCTATATGAGAGGGTTGCAGAAAATGAAGCAAATTCTGAATGGATGGATCTaGTTCCCCCATGCACTTGCA +
Preference number: 4 (lower is better)
Translates to: FCKCGFFYMRGLQKMKQILNGWI*FPHALA
Trigger: TGCAAGTGCATGGGGGAAGCAGATCCATCCATTCAG...AATTTGCTTCATTTTCTGCAACCCTCTCATATAGAAAAACCCACATTTGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATAAATACATTTCCCATTaGATAACAAGCATTCCATCG +
Preference number: 4 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYKYISH*ITSIPS
Trigger: CGATGGAATGCTTGTTATGCAATGGGAAATGTATTT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR GCA 90 bp AAATGCCAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTTAGAAGGCCCTGCTTaGTGGGAGTTAACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KCQEATTKNVFKRRKFQDLEGPA*WELTLV
Trigger: AACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAA...ATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp CTGAGACATAAGTTTGCCATACAATGTACTGCAGCTCTCCTGACTTCAGGATCATTTTATGGACATGTATaGTCACCTGAATCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LRHKFAIQCTAALLTSGSFYGHV*SPESSC
Trigger: ACAGCTTGATTCAGGTGAGCATACATGTCCATAAAA...TGATCCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCAAACTTATGTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR CCA 90 bp ATATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTAACAGGACAGAAATGGTGGATAAGCTaGCTCACTTTGCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: ICQQEIQVLFINNYLTGQKWWIS*LTLLTR
Trigger: TCTTGTCAGCAAAGTGAGCCAGCTTATCCACCATTT...CTGTCCTGTTAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR CCA 90 bp TGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAAGTTCTGTTAAGTAAATGGTaGATAAGCTGGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: CVSVVYVSKGSPLKGLKVLLSKW*ISWLTL
Trigger: CAAAGTGAGCCAGCTTATCCACCATTTACTTAACAG...AACTTTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590587.1
ENST00000592664.1
CDS-3UTR CCA 90 bp GTGGACACTATAGCTCCCAAGAGTGTGAGACTTGACACACGAACATTAACATCTAATCTGTTAAGTAAATaGTGGATAAGCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: VDTIAPKSVRLDTRTLTSNLLSK*WISWLT
Trigger: AGTGAGCCAGCTTATCCACCATTTACTTAACAGATT...AGATGTTAATGTTCGTGTGTCAAGTCTCACACTCTTGGGAGCTATAGTGTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CCA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGCTTTTTATTCAAAGTTaGTCGAGAAGCACTGGATTC +
Preference number: 4 (lower is better)
Translates to: LVYVHPQCCREENQHTVGLFIQS*SRSTGF
Trigger: GAATCCAGTGCTTCTCGACCAACTTTGAATAAAAAG...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp TCTTTATCCTTGGATGCTTCTATAGCTGATCGTAACATTTTCAAGAGCAGGAGATCCATCGGACTTTCATaGCAGCTTCTGTTAGAACAG +
Preference number: 4 (lower is better)
Translates to: SLSLDASIADRNIFKSRRSIGLS*QLLLEQ
Trigger: CTGTTCTAACAGAAGCTGCCATGAAAGTCCGATGGA...TCTCCTGCTCTTGAAAATGTTACGATCAGCTATAGAAGCATCCAAGGATAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR TCA 90 bp ATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTAACAGGACAGGAACATGTATGCTCACCTaGATCAAGCTGTATAAAAGA +
Preference number: 4 (lower is better)
Translates to: MPTGNPSAVHQQLPNRTGTCMLT*IKLYKR
Trigger: TCTTTTATACAGCTTGATTCAGGTGAGCATACATGT...TCCTGTCCTGTTAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR GCA 90 bp CCAGGAACTACACTGATGAATAGCCGAAATAGTATATGCCAACAGGAAATCCAAAGCCGAAATAGTATATaGCAACAGGAAATCCAAGTG +
Preference number: 4 (lower is better)
Translates to: PGTTLMNSRNSICQQEIQSRNSI*QQEIQV
Trigger: CACTTGGATTTCCTGTTGGCATATACTATTTCGGCT...TTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGTTCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR GCA 90 bp TGCAGCTCTGCTTGCAGCTTGCTAGAAATACAACTTGGTAACAACAGGAGATTGCATCAATATTGCATTTaGTGCGTCTGCAACAAATAT +
Preference number: 4 (lower is better)
Translates to: CSSACSLLEIQLGNNRRLHQYCI*CVCNKY
Trigger: ATATTTGTTGCAGACGCAGCAAATGCAATATTGATG...CAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp ATATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTAACAGGACAGCTGTTAAGTAAATGGTaGATAAGCTGGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: ICQQEIQVLFINNYLTGQLLSKW*ISWLTL
Trigger: CAAAGTGAGCCAGCTTATCCACCATTTACTTAACAG...CTGTCCTGTTAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR CCA 90 bp TGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAAGTTAATCTGTTAAGTAAATaGTGGATAAGCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: CVSVVYVSKGSPLKGLKVNLLSK*WISWLT
Trigger: AGTGAGCCAGCTTATCCACCATTTACTTAACAGATT...AACTTTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590587.1
ENST00000592664.1
CDS-3UTR CCA 90 bp AAATGCCAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTGTTGCAGAAGTAGTTaGACTTCAGGTAAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: KCQEATTKNVFKRRKFQDCCRSS*TSGKGA
Trigger: CGCACCTTTACCTGAAGTCCAACTACTTCTGCAACA...ATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTGGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR TCA 90 bp GCATTGCTTTTTACCTTGTCTTTATCCTTGGATGCTTCTATAGCTGATCGTAACATCAGGAATAAAAGCTaGCCAGTAGCCATAAAGAAC +
Preference number: 4 (lower is better)
Translates to: ALLFTLSLSLDASIADRNIRNKS*PVAIKN
Trigger: GTTCTTTATGGCTACTGGTCAGCTTTTATTCCTGAT...GTTACGATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR GCA 90 bp CGTAGGCTGACACAGTACTTGAATTCCAAAAAGTCTATGGTGTCTTCACTCTTCAAATACATTTCCCATTaGATAACAAGCATTCCATCG +
Preference number: 4 (lower is better)
Translates to: RRLTQYLNSKKSMVSSLFKYISH*ITSIPS
Trigger: CGATGGAATGCTTGTTATGCAATGGGAAATGTATTT...GAAGAGTGAAGACACCATAGACTTTTTGGAATTCAAGTACTGTGTCAGCCTACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CCA 90 bp CAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTCATCATTGGGTATAACACCGTaGGCATCTCTATGTTTAGTC +
Preference number: 4 (lower is better)
Translates to: QEATTKNVFKRRKFQDSSLGITP*ASLCLV
Trigger: GACTAAACATAGAGATGCCCACGGTGTTATACCCAA...TGATGAATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CCA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGAACAACAGGAGATTGTaGACACACTATTTTTCGTTA +
Preference number: 4 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLNNRRL*THYFSL
Trigger: TAACGAAAAATAGTGTGTCCACAATCTCCTGTTGTT...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR GCA 90 bp CAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTCATCATTTCTAGAGGTGCTATaGCTTCATTGTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QEATTKNVFKRRKFQDSSFLEVL*LHCFPA
Trigger: TGCAGGAAAACAATGAAGGCATAGCACCTCTAGAAA...TGATGAATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS TCA 90 bp CGTCCTCCGGGGCCACGCCACTGCCCTCGCTGTAGTTCTCGGAGATaGGCTGATCGAAGAGCAGGTGGATCTCGGTGCGGGCGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RPPGPRHCPRCSSRR*ADRRAGGSRCGRSC
Trigger: GCAGCTCCGCCCGCACCGAGATCCACCTGCTCTTCGATCAGCTCATCTCCGAGAACTACAGCGAGGGCAGTGGCGTGGCCCCGGAGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS GCA 90 bp GAGCCTGGCAGACAAGAGGCGAAACCCATTGCCTCGCTCAGGGATTaGTTCCCGCGGTGCCTCCCGCGGCTGCACGGAAGGCCACGAACC +
Preference number: 5 (lower is better)
Translates to: EPGRQEAKPIASLRD*FPRCLPRLHGRPRT
Trigger: GGTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTTGTCTGCCAGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS CCA 90 bp CGGTGCGGGCGGAGCTGCTGTCATCCGGGCGCAGGGCGCAGAGCCTaGCAGACAAGAGGCGAAACCCATTGCCTCGCTCAGGGATTGCTT +
Preference number: 5 (lower is better)
Translates to: RCGRSCCHPGAGRRA*QTRGETHCLAQGLL
Trigger: AAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTTGTCTGCCAGGCTCTGCGCCCTGCGCCCGGATGACAGCAGCTCCGCCCGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS TCA 90 bp GTCTCTCCGGGGCCACGCCACTGCCCTCGCTGTAGTTCTCGGAGATaGGCTGATCGAAGAGCAGGTGGATCTCGGTGCGGGCGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VSPGPRHCPRCSSRR*ADRRAGGSRCGRSC
Trigger: GCAGCTCCGCCCGCACCGAGATCCACCTGCTCTTCGATCAGCTCATCTCCGAGAACTACAGCGAGGGCAGTGGCGTGGCCCCGGAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585712.1
CDS GCA 90 bp CAAGAGGCGAAACCCATTGCCTCGCTCAGGGATTGCTTCCCGCGGTaGCTCCCGCGGCTGCACGGAAGGCCACGAACCGACAACTTGCAC +
Preference number: 5 (lower is better)
Translates to: QEAKPIASLRDCFPR*LPRLHGRPRTDNLH
Trigger: GTGCAAGTTGTCGGTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GGCAGGGAAGGTGGTCAGGGGAACACGGGCACTCCAGAAGCTCGGAGCAGCAGCCAGAGCTGCCAGGGCTaGAAGAATTTCCCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GREGGQGNTGTPEARSSSQSCQG*KNFPVC
Trigger: ACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTG...GCTGCTGCTCCGAGCTTCTGGAGTGCCCGTGTTCCCCTGACCACCTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CACGGGCACTCCAGAAGCTCGGAGCAGCAGCTCATCAGCTGTGAGGCACCGTCAAGGGACCAGGCTGCTTaGGCTCGAACATTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: HGHSRSSEQQLISCEAPSRDQAA*ARTFRD
Trigger: GTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCT...TGACGGTGCCTCACAGCTGATGAGCTGCTGCTCCGAGCTTCTGGAGTGCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTTGCCTCGCTCAGGGATaGCTTCCCGCGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSCLAQG*LPAVPP
Trigger: GGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCA...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCTGTCAGGTTGCCCAGGGACCAGGCTGCTTTGGCTCGAACATTCAGAGACTTGAGAGTGTCTGTCAGGTaGCCCAGGGACCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SVRLPRDQAALARTFRDLRVSVR*PRDQAA
Trigger: AGCAGCCTGGTCCCTGGGCAACCTGACAGACACTCT...CAAGTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCTGGGCAACCTGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS GCA 90 bp TTCTTGCTGTCATTCAGCCCGAGCAGCACTGTGATGCACAGCATCTaGCTGTCATTCGGCAGATTGCTGAAGGCCTCCAGTCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: FLLSFSPSSTVMHSI*LSFGRLLKASSRMG
Trigger: CCCCATGCGACTGGAGGCCTTCAGCAATCTGCCGAATGACAGGCAGATGCTGTGCATCACAGTGCTGCTCGGGCTGAATGACAGCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGTGCCTCGCTCAGGGATaGCTTCCCGCGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMCLAQG*LPAVPP
Trigger: GGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCA...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTGCCTCGCTCAGGGATaGCTTCCCGCGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKCLAQG*LPAVPP
Trigger: GGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCA...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CACGGGCACTCCAGAAGCTCGGAGCAGCAGCTCATCAGCTGTGAGGCACCGTCAAGGGCCCGGACTGCATaGCTTTTTACCTTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: HGHSRSSEQQLISCEAPSRARTA*LFTLSL
Trigger: TAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCT...TGACGGTGCCTCACAGCTGATGAGCTGCTGCTCCGAGCTTCTGGAGTGCCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGGGGATCTTCACTGATTaGTTAACCCTGGGAGTGCCC +
Preference number: 5 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLGIFTD*LTLGVP
Trigger: GGGCACTCCCAGGGTTAACAAATCAGTGAAGATCCC...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGTGCCTGCAGAGCTGCCAGGGCTaGAAGAATTTCCCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: HTREVRGTGQAQEVNQCLQSCQG*KNFPVC
Trigger: ACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTG...CAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGATTAAGAGTCCGGTGTaGCCTAGCAGCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQIKSPV*PSSSGR
Trigger: CCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAAT...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp TTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGATTAAGAGTCCGGTGTaGCCTAGCAGCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: FPGTERAAADLMRTLKFLIKSPV*PSSSGR
Trigger: CCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAAT...CAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAGAGTGTCTGTCAGGTaGCCCAGGGACCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIRVSVR*PRDQAA
Trigger: AGCAGCCTGGTCCCTGGGCAACCTGACAGACACTCT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGGCTGTGTCTCCAGTaGGTGCCTGGATGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIWLCLQ*VPGCCP
Trigger: TGGGCAGCATCCAGGCACCAACTGGAGACACAGCCA...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGCCACGAACCGACAACTaGCACAGCAGCCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQPRTDN*HSSHLF
Trigger: GAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTGG...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp GAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAATGCCTCGCTCAGGGATaGCTTCCCGCGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: ECVSVVYVSKGSPLKGLKCLAQG*LPAVPP
Trigger: GGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCA...TTTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR CAA 90 bp GTTAACCCTGGGAGTGCCCCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGACTGAGGAAGCGGAGTaGGGTATAACACCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: VNPGSAPCDPDESKQTARTEEAE*GITPWA
Trigger: TGCCCACGGTGTTATACCCAACTCCGCTTCCTCAGT...CCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGGGGCACTCCCAGGGTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TCGCATCCTGTGCAGCTGGGCCAGGACAAACTGGCTGAACTGCAGCTCTGCTTGCAGAAAGAAACTGCTTaGAGCCTTCCAAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: SHPVQLGQDKLAELQLCLQKETA*SLPRWQ
Trigger: CTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCTG...CAAGCAGAGCTGCAGTTCAGCCAGTTTGTCCTGGCCCAGCTGCACAGGATGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCAGTGCCTGGAACAGGAATCCTCCTaGGGCAGTACGACAATGGAA +
Preference number: 5 (lower is better)
Translates to: HTREVRGTGQAQEVNQCLEQESS*GSTTME
Trigger: TTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTTC...CAGGCACTGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAGTAGGCTTGAGTCATaGAAAAGTAGCCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: CSLFPGTERAAADLMRTLSRLES*KSSPLP
Trigger: TGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACT...CAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACCTGTCATTCGGCAGATaGCTGAAGGCCTCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDLSFGR*LKASGK
Trigger: CTTGCCAGAGGCCTTCAGCAATCTGCCGAATGACAG...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CAA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACCCAGGGCCCGTGAAGTaGCAGCTTTCACTAAGCGAT +
Preference number: 5 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDPGPVK*QLSLSD
Trigger: ATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGG...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CAA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACAGGGACCAGGCTGCTTaGGCTCGAACATTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDRDQAA*ARTFRD
Trigger: GTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCT...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CAA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGAGTGTCTGTCAGGTaGCCCAGGGACCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRRVSVR*PRDQAA
Trigger: AGCAGCCTGGTCCCTGGGCAACCTGACAGACACTCT...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACAGAGTGTCTGTCAGGTaGCCCAGGGACCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PYSHSVQGFLSYKGGPRHRVSVR*PRDQAA
Trigger: AGCAGCCTGGTCCCTGGGCAACCTGACAGACACTCT...GTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CAA 90 bp GTACTGCTCTCTCTTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTCTGGTGTTTCCATGTaGACAATCAGAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: VLLSLPRDGKGSCRSDAHSGVSM*TIRVSV
Trigger: GACAGACACTCTGATTGTCAACATGGAAACACCAGA...GTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAAGAGAGAGCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CAA 90 bp AGGTTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGATGGCTGTGTCTCCAGTaGGTGCCTGGATGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: RLEGPACWELTLVIGLWGWLCLQ*VPGCCP
Trigger: TGGGCAGCATCCAGGCACCAACTGGAGACACAGCCA...TCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATGGCTGTGTCTCCAGTaGGTGCCTGGATGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRWLCLQ*VPGCCP
Trigger: TGGGCAGCATCCAGGCACCAACTGGAGACACAGCCA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS TCA 90 bp GACACCAAGTGTTCCCTTCATGCAGGTTCACTCTGCCTGTGCCAGTaGCTGGGGCTGCCTCTATTTCACCACTGGATTCCTTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: DTKCSLHAGSLCLCQ*LGLPLFHHWIPFPP
Trigger: AGGAGGAAAAGGAATCCAGTGGTGAAATAGAGGCAGCCCCAGTCACTGGCACAGGCAGAGTGAACCTGCATGAAGGGAACACTTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000587003.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCCAGTGCCTCGCTCAGGGATaGCTTCCCGCGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: KKSMVSSLFCKAVTNAFQCLAQG*LPAVPP
Trigger: GGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCA...CTGGAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAAAGAGGCGAAACCCATaGCCTCGCTCAGGGATTGCT +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGKRRNP*PRSGIA
Trigger: AGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTT...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ACGACAATGGAAATGCAGAGTCGAATGAGCCAGCAGGGCTCTGAAGACCCCTTAAAGAGGCGAAACCCATaGCCTCGCTCAGGGATTGCT +
Preference number: 5 (lower is better)
Translates to: TTMEMQSRMSQQGSEDPLKRRNP*PRSGIA
Trigger: AGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTT...TAAGGGGTCTTCAGAGCCCTGCTGGCTCATTCGACTCTGCATTTCCATTGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCATTAAGAGTCCGGTGTaGCCTAGCAGCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIIKSPV*PSSSGR
Trigger: CCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAAT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CCTGTATTACAACCTGACTCCTCGGCTCCTGGATGCACAGGTCAGATGTTCCAACTGTCATTCGGCAGATaGCTGAAGGCCTCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: PVLQPDSSAPGCTGQMFQLSFGR*LKASGK
Trigger: CTTGCCAGAGGCCTTCAGCAATCTGCCGAATGACAG...TTGGAACATCTGACCTGTGCATCCAGGAGCCGAGGAGTCAGGTTGTAATACAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTCCAGGGCCCGTGAAGTaGCAGCTTTCACTAAGCGAT +
Preference number: 5 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPPGPVK*QLSLSD
Trigger: ATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGG...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGACCAGGGCCCGTGAAGTaGCAGCTTTCACTAAGCGAT +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGPGPVK*QLSLSD
Trigger: ATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGG...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAGGGACCAGGCTGCTTaGGCTCGAACATTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIRDQAA*ARTFRD
Trigger: GTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAGTGTCTGTCAGGTaGCCCAGGGACCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLERVSVR*PRDQAA
Trigger: AGCAGCCTGGTCCCTGGGCAACCTGACAGACACTCT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGTGGCTGTGTCTCCAGTaGGTGCCTGGATGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: IFPLSSRVSFIQGRSEALWLCLQ*VPGCCP
Trigger: TGGGCAGCATCCAGGCACCAACTGGAGACACAGCCA...CAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGAGAATCAGCATACTGTaGGGACACAGCAGGTACCAC +
Preference number: 5 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQRISIL*GHSRYH
Trigger: GTGGTACCTGCTGTGTCCCAACAGTATGCTGATTCT...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGAAGAGGCGAAACCCATaGCCTCGCTCAGGGATTGCT +
Preference number: 5 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVKRRNP*PRSGIA
Trigger: AGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTT...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGACAGAGCTGCCAGGGCTaGAAGAATTTCCCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGQSCQG*KNFPVC
Trigger: ACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTG...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCAGAGCTGCCAGGGCTaGAAGAATTTCCCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIQSCQG*KNFPVC
Trigger: ACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTACTGAGGAAGCGGAGTaGGGTATAACACCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSTEEAE*GITPWA
Trigger: TGCCCACGGTGTTATACCCAACTCCGCTTCCTCAGT...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGATCTGGTTCCAGACTTaGGTCAGCAGGCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQIWFQT*VSRLSF
Trigger: AAAACTCAGCCTGCTGACCAAAGTCTGGAACCAGAT...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGCGCTCGCCTGGAGAGTaGGGTGTTCTGAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQRSPGE*GVLNSA
Trigger: TGCAGAATTCAGAACACCCAACTCTCCAGGCGAGCG...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CAA 90 bp CTGATGCGCACTTTGAAGTTCTTGCATGATGTCACGACCGATGTCAGGGCATTGAGGGACCAGGCTGCTTaGGCTCGAACATTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LMRTLKFLHDVTTDVRALRDQAA*ARTFRD
Trigger: GTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCT...CAATGCCCTGACATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TTCCCCGGGACGGAAAGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGAGGGCCCGGACTGCATaGCTTTTTACCTTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: FPGTERAAADLMRTLKFLRARTA*LFTLSL
Trigger: TAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCT...CAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCTTTCCGTCCCGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp ATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAAGATCTGATGCGCACTTaGAAGTTCTTGCATGATGTC +
Preference number: 5 (lower is better)
Translates to: IRAYWSTDPYCSLFPGTEDLMRT*KFLHDV
Trigger: GACATCATGCAAGAACTTCAAAGTGCGCATCAGATC...TTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CAA 90 bp AGGTTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGAACTCTGGTTATTGGATaGTGGGGAGGTGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RLEGPACWELTLVIGLWGTLVIG*WGGVAG
Trigger: CCCTGCCACACCTCCCCACAATCCAATAACCAGAGT...TCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp GATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGATTTCATGGCAGCTTCTaGTCTTTATCCTTGGATGCT +
Preference number: 5 (lower is better)
Translates to: DPSILVNRPVLLSLPRDGFHGSF*SLSLDA
Trigger: AGCATCCAAGGATAAAGACAAGAAGCTGCCATGAAA...TCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587314.1
CDS GCA 90 bp CTGGGAGGTACTTTGACATTTGGAGCCATTGCAGTACACCAGAGCTaGCAGGGCTTGAAGAATTTCCCTGTGTGTCCAGGAACTACACTG +
Preference number: 5 (lower is better)
Translates to: LGGTLTFGAIAVHQS*QGLKNFPVCPGTTL
Trigger: CAGTGTAGTTCCTGGACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTCAAAGTACCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613428.4
CDS-3UTR CAA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCCACGAACCGACAACTaGCACAGCAGCCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVPRTDN*HSSHLF
Trigger: GAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTGG...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGAAGAGGCGAAACCCATaGCCTCGCTCAGGGATTGCT +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKKRRNP*PRSGIA
Trigger: AGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGCTCTGGGAGGTACTTTaGACATTTGGAGCCATTGCA +
Preference number: 5 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGLWEVL*TFGAIA
Trigger: TGCAATGGCTCCAAATGTCAAAAGTACCTCCCAGAG...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000184956.11
ENST00000585976.5
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGATTAAGAGTCCGGTGTaGCCTAGCAGCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKIKSPV*PSSSGR
Trigger: CCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAAT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GCCCCTAAGATGAAATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGACTGAGGAAGCGGAGTaGGGTATAACACCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: APKMKSHRSYAQAQVFLLTEEAE*GITPWA
Trigger: TGCCCACGGTGTTATACCCAACTCCGCTTCCTCAGT...CAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATTTCATCTTAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTACTGAGGAAGCGGAGTaGGGTATAACACCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGTEEAE*GITPWA
Trigger: TGCCCACGGTGTTATACCCAACTCCGCTTCCTCAGT...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGTTCCTCCTCCTCTCCTaGCTGGATTTTCTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQFLLLS*LDFLWF
Trigger: AAACCAAAGAAAATCCAGCAAGGAGAGGAGGAGGAA...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGACACAGGCACGTGTCTTaGGAGAAGGGTCTTTCAATG +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGHRHVS*EKGLSM
Trigger: CATTGAAAGACCCTTCTCCAAAGACACGTGCCTGTG...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCCAGAAAGAAACTGCTTaGAGCCTTCCAAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: HSVQGFLSYKGGPRHWPSQKETA*SLPRWQ
Trigger: CTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCTG...GCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGGTTCCAGACTTaGGTCAGCAGGCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGIWFQT*VSRLSF
Trigger: AAAACTCAGCCTGCTGACCAAAGTCTGGAACCAGAT...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TTTCCCCACAGCAGCTTTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGTTGAAAAGTAGCCCCTaGCCAGAAGAGTCAATACCT +
Preference number: 5 (lower is better)
Translates to: FPHSSFMEARAQAYEELLLKSSP*PEESIP
Trigger: AGGTATTGACTCTTCTGGCAAGGGGCTACTTTTCAA...CAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAAAGCTGCTGTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTCGCTCGCCTGGAGAGTaGGGTGTTCTGAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESRSPGE*GVLNSA
Trigger: TGCAGAATTCAGAACACCCAACTCTCCAGGCGAGCG...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGTTCACTAAGCGATTCTaGCTGTCATTCAGCCCGAGC +
Preference number: 5 (lower is better)
Translates to: LGSGVSMLTIRVSVRLPRFTKRF*LSFSPS
Trigger: GCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAA...CCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CAA 90 bp TGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGCCAGGGCCCGTGAAGTaGCAGCTTTCACTAAGCGAT +
Preference number: 5 (lower is better)
Translates to: WTIFPLSSRVSFIQGRSEPGPVK*QLSLSD
Trigger: ATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGG...CTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp GATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGACGAACATTCAGAGACTaGTCTTCAAGTGACATCAAT +
Preference number: 5 (lower is better)
Translates to: DPSILVNRPVLLSLPRDGRTFRD*SSSDIN
Trigger: ATTGATGTCACTTGAAGACAAGTCTCTGAATGTTCG...TCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGAGGGACCAGGCTGCTTaGGCTCGAACATTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMRDQAA*ARTFRD
Trigger: GTCTCTGAATGTTCGAGCCAAAGCAGCCTGGTCCCT...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCCCCAATCACTGCCCAGAGAGCAGTTTCTGAGCAGCCAACATGTCAGAGGCAGGATCTGATGCGCACTTaGAAGTTCTTGCATGATGTC +
Preference number: 5 (lower is better)
Translates to: SPITAQRAVSEQPTCQRQDLMRT*KFLHDV
Trigger: GACATCATGCAAGAACTTCAAAGTGCGCATCAGATC...CTGCCTCTGACATGTTGGCTGCTCAGAAACTGCTCTCTGGGCAGTGATTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAGGGATCTTCACTGATTaGTTAACCCTGGGAGTGCCC +
Preference number: 5 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRGIFTD*LTLGVP
Trigger: GGGCACTCCCAGGGTTAACAAATCAGTGAAGATCCC...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCGCTCTGGGAGGTACTTaGACATTTGGAGCCATTGCA +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIALGGT*TFGAIA
Trigger: TGCAATGGCTCCAAATGTCAAAGTACCTCCCAGAGC...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613428.4
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCCACGAACCGACAACTaGCACAGCAGCCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKPRTDN*HSSHLF
Trigger: GAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTGG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GAGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTAAGAGGCGAAACCCATaGCCTCGCTCAGGGATTGCT +
Preference number: 5 (lower is better)
Translates to: ERVCVCRLCVKRITSKGPKRRNP*PRSGIA
Trigger: AGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTT...AGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCTCTGGGAGGTACTTTaGACATTTGGAGCCATTGCA +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGILWEVL*TFGAIA
Trigger: TGCAATGGCTCCAAATGTCAAAAGTACCTCCCAGAG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000184956.11
ENST00000585976.5
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTGATTGCTGTGGTTaGATAGGTGTTCGCCCATCA +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGSDCCG*IGVRPS
Trigger: TGATGGGCGAACACCTATCAAACCACAGCAATCAGA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AGACTCCCAGGGCCCGTGAAGTTGCAGCTTTCACTAAGCGATTCTTGCTGTCATTCTGATTGCTGTGGTTaGATAGGTGTTCGCCCATCA +
Preference number: 5 (lower is better)
Translates to: RLPGPVKLQLSLSDSCCHSDCCG*IGVRPS
Trigger: TGATGGGCGAACACCTATCAAACCACAGCAATCAGA...ATGACAGCAAGAATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGGGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGACACAGGCACGTGTCTTaGGAGAAGGGTCTTTCAATG +
Preference number: 5 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRHRHVS*EKGLSM
Trigger: CATTGAAAGACCCTTCTCCAAAGACACGTGCCTGTG...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAAAGGGGATCATAAGGTGCATTaGATACTAAATTTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: EHTGQQTRTALSSPGRKGDHKVH*ILNLQG
Trigger: GCCTTGCAAATTTAGTATCAAATGCACCTTATGATC...CCCTTTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCTTCCCCCATGCACTaGCAAATCACCTCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYASPMH*QITSPS
Trigger: GCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAGC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CCTGTATTACAACCTGACTCCTCGGCTCCTGGATGCACAGGTCAGATGTTCCAAGTTCTTCCAGAAGCTTaGCTCCATGAAGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: PVLQPDSSAPGCTGQMFQVLPEA*LHEAEW
Trigger: CCATTCAGCTTCATGGAGCAAAGCTTCTGGAAGAAC...TTGGAACATCTGACCTGTGCATCCAGGAGCCGAGGAGTCAGGTTGTAATACAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp AGGTTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGATTCACTAAGCGATTCTaGCTGTCATTCAGCCCGAGC +
Preference number: 5 (lower is better)
Translates to: RLEGPACWELTLVIGLWGFTKRF*LSFSPS
Trigger: GCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAA...TCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGATTCACTAAGCGATTCTaGCTGTCATTCAGCCCGAGC +
Preference number: 5 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRFTKRF*LSFSPS
Trigger: GCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAA...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATCCAGGGCCCGTGAAGTaGCAGCTTTCACTAAGCGAT +
Preference number: 5 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYPGPVK*QLSLSD
Trigger: ATCGCTTAGTGAAAGCTGCAACTTCACGGGCCCTGG...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ATGAAGCAAATTTCCAAGGGCCCGGACTGCATTGCTTTTTACCTTGTCTTTATCAGAGTGTCTGTCAGGTaGCCCAGGGACCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: MKQISKGPDCIAFYLVFIRVSVR*PRDQAA
Trigger: AGCAGCCTGGTCCCTGGGCAACCTGACAGACACTCT...GATAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCTTGGAAATTTGCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCTGGTGTTTCCATGTaGACAATCAGAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: HSVQGFLSYKGGPRHWPSSGVSM*TIRVSV
Trigger: GACAGACACTCTGATTGTCAACATGGAAACACCAGA...GCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CAA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACTCTGGTGTTTCCATGTaGACAATCAGAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDSGVSM*TIRVSV
Trigger: GACAGACACTCTGATTGTCAACATGGAAACACCAGA...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CAA 90 bp GCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGTCTGGTGTTTCCATGTaGACAATCAGAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: AQAQVFLLPPSTSRKYGGSGVSM*TIRVSV
Trigger: GACAGACACTCTGATTGTCAACATGGAAACACCAGA...CCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TGTAAAGCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGACTCTTCCTGGAAACTaGGGTCTGGTGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: CKAVTNAFQIRAYWSTDPTLPGN*GLVFPC
Trigger: ACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGT...CGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGCTTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CAA 90 bp CTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGACTCTTCCTGGAAACTaGGGTCTGGTGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: LGSGVSMLTIRVSVRLPRTLPGN*GLVFPC
Trigger: ACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGT...CCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCAGGGCCCGGACTGCATaGCTTTTTACCTTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIRARTA*LFTLSL
Trigger: TAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCT...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGACGCACTTTGAAGTTCTaGCATGATGTCACGACCGAT +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGRTLKF*HDVTTD
Trigger: ATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCG...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTGGGATCTTCACTGATTaGTTAACCCTGGGAGTGCCC +
Preference number: 5 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESGIFTD*LTLGVP
Trigger: GGGCACTCCCAGGGTTAACAAATCAGTGAAGATCCC...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ATCCGAGCATACTGGTCAACAGACCCGTACTGCTCTCTCTTCCCCGGGACGGAATTGGCGAACTTTAGCTaGGTAAGACCTTTCATAACT +
Preference number: 5 (lower is better)
Translates to: IRAYWSTDPYCSLFPGTELANFS*VRPFIT
Trigger: AGTTATGAAAGGTCTTACCAAGCTAAAGTTCGCCAA...TTCCGTCCCGGGGAAGAGAGAGCAGTACGGGTCTGTTGACCAGTATGCTCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS GCA 90 bp GATCAGACTGAGCCAAGTCACTCAACTTCATTAAGAGTCCGGTGTTaGCTAGCAGCTCTGGGAGGTACTTTGACATTTGGAGCCATTGCA +
Preference number: 5 (lower is better)
Translates to: DQTEPSHSTSLRVRC*LAALGGTLTFGAIA
Trigger: TGCAATGGCTCCAAATGTCAAAGTACCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAATGAAGTTGAGTGACTTGGCTCAGTCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613428.4
CDS-3UTR CAA 90 bp TTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCACTCTGGGAGGTACTTTaGACATTTGGAGCCATTGCA +
Preference number: 5 (lower is better)
Translates to: FLSYKGGPRHWPSSRGESLWEVL*TFGAIA
Trigger: TGCAATGGCTCCAAATGTCAAAAGTACCTCCCAGAG...TGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTCACAGGCACGTGTCTTaGGAGAAGGGTCTTTCAATG +
Preference number: 5 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESHRHVS*EKGLSM
Trigger: CATTGAAAGACCCTTCTCCAAAGACACGTGCCTGTG...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGACAGAAAGAAACTGCTTaGAGCCTTCCAAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: HRSYAQAQVFLLPPSTSRQKETA*SLPRWQ
Trigger: CTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCTG...TCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTATCTGGTTCCAGACTTaGGTCAGCAGGCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSIWFQT*VSRLSF
Trigger: AAAACTCAGCCTGCTGACCAAAGTCTGGAACCAGAT...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGAACAGGAATCCTCCTaGGGCAGTACGACAATGGAA +
Preference number: 5 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEEQESS*GSTTME
Trigger: TTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTTC...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGAACAGGAATCCTCCTaGGGCAGTACGACAATGGAA +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKEQESS*GSTTME
Trigger: TTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTTC...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CATCGGACTTTCATGGCAGCTTCTGTTAGAACAGTAGAAATTAGGGCCTGGATAGCTTCCCCCATGCACTaGCAAATCACCTCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: HRTFMAASVRTVEIRAWIASPMH*QITSPS
Trigger: GCTTGGAGAGGTGATTTGCAAGTGCATGGGGGAAGC...TATCCAGGCCCTAATTTCTACTGTTCTAACAGAAGCTGCCATGAAAGTCCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTTCACTAAGCGATTCTaGCTGTCATTCAGCCCGAGC +
Preference number: 5 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESFTKRF*LSFSPS
Trigger: GCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAA...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACCAAGTGACATCAATATaGCATTTGCTGCGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDQVTSI*HLLRLQ
Trigger: TTGCAGACGCAGCAAATGCAATATTGATGTCACTTG...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp AAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTACTCTTCCTGGAAACTaGGGTCTGGTGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: KLRSSYCRLRHLESMVGSTLPGN*GLVFPC
Trigger: ACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGT...AGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTGATGCGCACTTTGAAGTTCTTGCATGATGTCACGACCGATGTCAGGGCATTGCGCACTTTGAAGTTCTaGCATGATGTCACGACCGAT +
Preference number: 5 (lower is better)
Translates to: LMRTLKFLHDVTTDVRALRTLKF*HDVTTD
Trigger: ATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCG...CAATGCCCTGACATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CAA 90 bp AGGGCAGCTGCAGATCTGATGCGCACTTTGAAGTTCTTGCATGATGTCACGACCGATCTGATGCGCACTTaGAAGTTCTTGCATGATGTC +
Preference number: 5 (lower is better)
Translates to: RAAADLMRTLKFLHDVTTDLMRT*KFLHDV
Trigger: GACATCATGCAAGAACTTCAAAGTGCGCATCAGATC...GGTCGTGACATCATGCAAGAACTTCAAAGTGCGCATCAGATCTGCAGCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CAA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACACATCAATATTGCATTaGCTGCGTCTGTCTGAGACA +
Preference number: 5 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDTSILH*LRLSET
Trigger: TGTCTCAGACAGACGCAGCAAATGCAATATTGATGT...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591683.1
CDS-3UTR CAA 90 bp GGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGGGACCAAGTGACATCAATATaGCATTTGCTGCGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: GSGVSMLTIRVSVRLPRDQVTSI*HLLRLS
Trigger: AGACAGACGCAGCAAATGCAATATTGATGTCACTTG...GTCCCTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591683.1
CDS TCA 90 bp CTGGATTCTGATTGCTGTGGTTTGATAGGTGTTCGCCCATCATACTaGGGAAGCGGAGTTGGGTATAACACCGTGGGCATCTCTATGTTT +
Preference number: 5 (lower is better)
Translates to: LDSDCCGLIGVRPSY*GSGVGYNTVGISMF
Trigger: AAACATAGAGATGCCCACGGTGTTATACCCAACTCCGCTTCCTCAGTATGATGGGCGAACACCTATCAAACCACAGCAATCAGAATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000587003.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TGCACTTGCAAATCACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAACCACGAACCGACAACTaGCACAGCAGCCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: CTCKSPLQAPSSRLESLKPRTDN*HSSHLF
Trigger: GAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTGG...TTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTGATTTGCAAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATTGGAAACAGACATTTaGGTAGGGCTCCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGLETDI*VGLLQI
Trigger: TATTTGGAGGAGCCCTACCAAAATGTCTGTTTCCAA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TGTAAAGCGGTGACCAATGCATTCCAGATCCGAGCATACTGGTCAACAGACCCGTTGGAAACAGACATTTaGGTAGGGCTCCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: CKAVTNAFQIRAYWSTDPLETDI*VGLLQI
Trigger: TATTTGGAGGAGCCCTACCAAAATGTCTGTTTCCAA...CGGGTCTGTTGACCAGTATGCTCGGATCTGGAATGCATTGGTCACCGCTTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGTCTGATTGCTGTGGTTaGATAGGTGTTCGCCCATCA +
Preference number: 5 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMSDCCG*IGVRPS
Trigger: TGATGGGCGAACACCTATCAAACCACAGCAATCAGA...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTCAGAAAGAAACTGCTTaGAGCCTTCCAAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGQKETA*SLPRWQ
Trigger: CTGCCATCTTGGAAGGCTCAAAGCAGTTTCTTTCTG...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCCAAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCCGCTCGCCTGGAGAGTaGGGTGTTCTGAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: SKKSMVSSLFCKAVTNAFRSPGE*GVLNSA
Trigger: TGCAGAATTCAGAACACCCAACTCTCCAGGCGAGCG...GAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TCCAAAAAGTCTATGGTGTCTTCACTCTTCTGTAAAGCGGTGACCAATGCATTCCTGTCATTCGGCAGATaGCTGAAGGCCTCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: SKKSMVSSLFCKAVTNAFLSFGR*LKASGK
Trigger: CTTGCCAGAGGCCTTCAGCAATCTGCCGAATGACAG...GAATGCATTGGTCACCGCTTTACAGAAGAGTGAAGACACCATAGACTTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CCTTGTGATCCAGATGAGTCAAAACAAACGGCCAGGATCTCTTCTAAAAAGCCCTTCACTAAGCGATTCTaGCTGTCATTCAGCCCGAGC +
Preference number: 5 (lower is better)
Translates to: PCDPDESKQTARISSKKPFTKRF*LSFSPS
Trigger: GCTCGGGCTGAATGACAGCAAGAATCGCTTAGTGAA...GGGCTTTTTAGAAGAGATCCTGGCCGTTTGTTTTGACTCATCTGGATCACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TTTCCCCACAGCAGCTTTATGGAGGCACGTGCCCAGGCATATGAGGAGCTTCTGACATCAATATTGCATTaGCTGCGTCTGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: FPHSSFMEARAQAYEELLTSILH*LRLQQI
Trigger: TATTTGTTGCAGACGCAGCAAATGCAATATTGATGT...CAGAAGCTCCTCATATGCCTGGGCACGTGCCTCCATAAAGCTGCTGTGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCCAAGTGACATCAATATaGCATTTGCTGCGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIQVTSI*HLLRLQ
Trigger: TTGCAGACGCAGCAAATGCAATATTGATGTCACTTG...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AGGTTAGAAGGCCCTGCTTGCTGGGAGTTAACTCTGGTTATTGGATTGTGGGGATCTGGTGTTTCCATGTaGACAATCAGAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: RLEGPACWELTLVIGLWGSGVSM*TIRVSV
Trigger: GACAGACACTCTGATTGTCAACATGGAAACACCAGA...TCCCCACAATCCAATAACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTACTCTTCCTGGAAACTaGGGTCTGGTGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESTLPGN*GLVFPC
Trigger: ACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGT...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGGGCCCGGACTGCATaGCTTTTTACCTTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLERARTA*LFTLSL
Trigger: TAAAGACAAGGTAAAAAGCAATGCAGTCCGGGCCCT...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCGCACTTTGAAGTTCTaGCATGATGTCACGACCGAT +
Preference number: 5 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMRTLKF*HDVTTD
Trigger: ATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCG...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TGCAGCTCTGCTTGCAGCTTGCTAGAAATACAACTTGGTAACAACAGGAGATTGGTTAGAAGGCCCTGCTaGCTGGGAGTTAACTCTGGT +
Preference number: 5 (lower is better)
Translates to: CSSACSLLEIQLGNNRRLVRRPC*LGVNSG
Trigger: ACCAGAGTTAACTCCCAGCAAGCAGGGCCTTCTAAC...CAATCTCCTGTTGTTACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp ACACTGAGACATAAGTTTGCCATACAATGTACTGCAGCTCTCCTGACTTCAGGACCCCACCCCAAGGTCTaGCTCACTTCTTCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: TLRHKFAIQCTAALLTSGPHPKV*LTSSSL
Trigger: TAAAGAGGAAGAAGTGAGCAAGACCTTGGGGTGGGG...TCCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCAAACTTATGTCTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR CAA 90 bp GAGAGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTAAAGGGCCTGAAAGTTaGATCAACGTAGGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: ERVCVCRLCVKRITSKGPKGPES*INVGAF
Trigger: GAAGGCCCCTACGTTGATCAAACTTTCAGGCCCTTT...AGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590587.1
ENST00000592664.1
CDS-3UTR CAA 90 bp ATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTAACAGGACAGGACAGAGCTGCCAGGGCTaGAAGAATTTCCCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: MPTGNPSAVHQQLPNRTGQSCQG*KNFPVC
Trigger: ACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTG...TCCTGTCCTGTTAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTTCCTCCTCCTCTCCTaGCTGGATTTTCTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKFLLLS*LDFLWF
Trigger: AAACCAAAGAAAATCCAGCAAGGAGAGGAGGAGGAA...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ACTGGACCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGTTCCTCCTCCTCTCCTaGCTGGATTTTCTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: TGPYSHSVQGFLSYKGGPFLLLS*LDFLWF
Trigger: AAACCAAAGAAAATCCAGCAAGGAGAGGAGGAGGAA...CGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAATTCCTCCTCCTCTCCTaGCTGGATTTTCTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEFLLLS*LDFLWF
Trigger: AAACCAAAGAAAATCCAGCAAGGAGAGGAGGAGGAA...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATTGGCGAACTTTAGCTaGGTAAGACCTCATTTTACT +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGLANFS*VRPHFT
Trigger: AGTAAAATGAGGTCTTACCAAGCTAAAGTTCGCCAA...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTTCTGGTGTTTCCATGTaGACAATCAGAGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGSGVSM*TIRVSV
Trigger: GACAGACACTCTGATTGTCAACATGGAAACACCAGA...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATACTCTTCCTGGAAACTaGGGTCTGGTGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYTLPGN*GLVFPC
Trigger: ACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGATCTGATGCGCACTTaGAAGTTCTTGCATGATGTC +
Preference number: 5 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMDLMRT*KFLHDV
Trigger: GACATCATGCAAGAACTTCAAAGTGCGCATCAGATC...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAGATCTGATGCGCACTTaGAAGTTCTTGCATGATGTC +
Preference number: 5 (lower is better)
Translates to: TDLMLKLRSSYCRLRHLEDLMRT*KFLHDV
Trigger: GACATCATGCAAGAACTTCAAAGTGCGCATCAGATC...TTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GCCCCTAAGATGAAATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGGAGCCTTTAGTGAACTaGAATACCCTGTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: APKMKSHRSYAQAQVFLLEPLVN*NTLFPN
Trigger: ATTGGGGAACAGGGTATTCAAGTTCACTAAAGGCTC...CAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATTTCATCTTAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp AGAGTGTGTGTCTGTCGTTTATGTGTCAAAAGGATCACCTCTAAAGGGCCTGAAAAAGGGCCTGAAAGTTaGATCAACGTAGGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RVCVCRLCVKRITSKGPEKGPES*INVGAF
Trigger: GAAGGCCCCTACGTTGATCAAACTTTCAGGCCCTTT...TTCAGGCCCTTTAGAGGTGATCCTTTTGACACATAAACGACAGACACACACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590587.1
ENST00000592664.1
CDS-3UTR CAA 90 bp ATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTGAATCAAGCTGTCCACGAACCGACAACTaGCACAGCAGCCATCTTTTC +
Preference number: 5 (lower is better)
Translates to: MPTGNPSAVHQQLPESSCPRTDN*HSSHLF
Trigger: GAAAAGATGGCTGCTGTGCAAGTTGTCGGTTCGTGG...ACAGCTTGATTCAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR CAA 90 bp CTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGTTGGAAACAGACATTTaGGTAGGGCTCCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: LMLKLRSSYCRLRHLESMLETDI*VGLLQI
Trigger: TATTTGGAGGAGCCCTACCAAAATGTCTGTTTCCAA...CATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGTTGGCGAACTTTAGCTaGGTAAGACCTCATTTTACT +
Preference number: 5 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVLANFS*VRPHFT
Trigger: AGTAAAATGAGGTCTTACCAAGCTAAAGTTCGCCAA...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CGTAGGCTGACACAGTACTTGAATTCCAAAAAGTCTATGGTGTCTTCACTCTTCCACAGGCACGTGTCTTaGGAGAAGGGTCTTTCAATG +
Preference number: 5 (lower is better)
Translates to: RRLTQYLNSKKSMVSSLFHRHVS*EKGLSM
Trigger: CATTGAAAGACCCTTCTCCAAAGACACGTGCCTGTG...GAAGAGTGAAGACACCATAGACTTTTTGGAATTCAAGTACTGTGTCAGCCTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp GTTGGGACACAGCAGGTACCACTGCCTTCTGAAGTTTCTAGAGGTGCTATGCCTGATCATAAGGTGCATTaGATACTAAATTTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: VGTQQVPLPSEVSRGAMPDHKVH*ILNLQG
Trigger: GCCTTGCAAATTTAGTATCAAATGCACCTTATGATC...AGGCATAGCACCTCTAGAAACTTCAGAAGGCAGTGGTACCTGCTGTGTCCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCGATCATAAGGTGCATTaGATACTAAATTTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIDHKVH*ILNLQG
Trigger: GCCTTGCAAATTTAGTATCAAATGCACCTTATGATC...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGAGATCATAAGGTGCATTaGATACTAAATTTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: LKLRSSYCRLRHLESMVGDHKVH*ILNLQG
Trigger: GCCTTGCAAATTTAGTATCAAATGCACCTTATGATC...TCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGGAACAGGAATCCTCCTaGGGCAGTACGACAATGGAA +
Preference number: 5 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLEQESS*GSTTME
Trigger: TTCCATTGTCGTACTGCCCAAGGAGGATTCCTGTTC...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGCGAACATTCAGAGACTaGTCTTCAAGTGACATCAAT +
Preference number: 5 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVRTFRD*SSSDIN
Trigger: ATTGATGTCACTTGAAGACAAGTCTCTGAATGTTCG...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp ACTTGGGTCTGGTGTTTCCATGTTGACAATCAGAGTGTCTGTCAGGTTGCCCAGCGAACATTCAGAGACTaGTCTTCAAGTGACATCAAT +
Preference number: 5 (lower is better)
Translates to: TWVWCFHVDNQSVCQVAQRTFRD*SSSDIN
Trigger: ATTGATGTCACTTGAAGACAAGTCTCTGAATGTTCG...CTGGGCAACCTGACAGACACTCTGATTGTCAACATGGAAACACCAGACCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000591683.1
CDS-3UTR CAA 90 bp CCATATTCCCACTCAGTTCAAGGGTTTCTTTCATACAAGGGAGGTCCGAGGCACACCTTGTCTTTATCCTaGGATGCTTCTATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: PYSHSVQGFLSYKGGPRHTLSLS*DASIAD
Trigger: ATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGT...GTGCCTCGGACCTCCCTTGTATGAAAGAAACCCTTGAACTGAGTGGGAATATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp AATCCCACAGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATGCATTGCTTTTTACCTaGTCTTTATCCTTGGATGCT +
Preference number: 5 (lower is better)
Translates to: NPTDLMLKLRSSYCRLRHALLFT*SLSLDA
Trigger: AGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC...ATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCTGTGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTTTCATCAGCTTAAGTaGTCTTTATTGTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: QAQVFLLPPSTSRKYGGIFHQLK*SLLSVA
Trigger: AGCCACTGACAATAAAGACAACTTAAGCTGATGAAA...GATCCCACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp CGAAATAGTATATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTAATTAAGAGTCCGGTGTaGCCTAGCAGCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RNSICQQEIQVLFINNYLIKSPV*PSSSGR
Trigger: CCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAAT...TAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCATATACTATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR CAA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGTCTTTTTATTCAAAGTaGGTCGAGAAGCACTGGATT +
Preference number: 5 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVSFYSK*VEKHWI
Trigger: AATCCAGTGCTTCTCGACCAACTTTGAATAAAAAGA...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTTTGGCGAACTTTAGCTaGGTAAGACCTCATTTTACT +
Preference number: 5 (lower is better)
Translates to: YAQAQVFLLPPSTSRKYGLANFS*VRPHFT
Trigger: AGTAAAATGAGGTCTTACCAAGCTAAAGTTCGCCAA...ACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TGCACTTGCAAATCACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAATTGAAAAGTAGCCCCTaGCCAGAAGAGTCAATACCT +
Preference number: 5 (lower is better)
Translates to: CTCKSPLQAPSSRLESLKLKSSP*PEESIP
Trigger: AGGTATTGACTCTTCTGGCAAGGGGCTACTTTTCAA...TTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTGATTTGCAAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CTGCACATGAACATTAACATCCACATCAGGATCTGGAAACCTTTACAGAAGCTGAGTAGGCTTGAGTCATaGAAAAGTAGCCCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LHMNINIHIRIWKPLQKLSRLES*KSSPLP
Trigger: TGGCAAGGGGCTACTTTTCAATGACTCAAGCCTACT...CAGCTTCTGTAAAGGTTTCCAGATCCTGATGTGGATGTTAATGTTCATGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp ATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGGTGACATCAATATTGCATTaGCTGCGTCTGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: MLKLRSSYCRLRHLESMVTSILH*LRLQQI
Trigger: TATTTGTTGCAGACGCAGCAAATGCAATATTGATGT...CACCATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATCAAGTGACATCAATATaGCATTTGCTGCGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYQVTSI*HLLRLQ
Trigger: TTGCAGACGCAGCAAATGCAATATTGATGTCACTTG...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGCGAACATTCAGAGACTaGTCTTCAAGTGACATCAAT +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKRTFRD*SSSDIN
Trigger: ATTGATGTCACTTGAAGACAAGTCTCTGAATGTTCG...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp CGTAGGCTGACACAGTACTTGAATTCCAAAAAGTCTATGGTGTCTTCACTCTTCACTCTTCCTGGAAACTaGGGTCTGGTGTTTCCATGT +
Preference number: 5 (lower is better)
Translates to: RRLTQYLNSKKSMVSSLFTLPGN*GLVFPC
Trigger: ACATGGAAACACCAGACCCAAGTTTCCAGGAAGAGT...GAAGAGTGAAGACACCATAGACTTTTTGGAATTCAAGTACTGTGTCAGCCTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587003.5
ENST00000587314.1
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGACCTTGTCTTTATCCTaGGATGCTTCTATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKTLSLS*DASIAD
Trigger: ATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTGCATTGCTTTTTACCTaGTCTTTATCCTTGGATGCT +
Preference number: 5 (lower is better)
Translates to: DLMLKLRSSYCRLRHLESALLFT*SLSLDA
Trigger: AGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC...ACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TTAGTGTATGTACACCCACAATGCTGCAGAGAAGAGAATCAGCATACTGTTGGGAGCTCTGCTTGCAGCTaGCTAGAAATACAACTTGGT +
Preference number: 5 (lower is better)
Translates to: LVYVHPQCCREENQHTVGSSACS*LEIQLG
Trigger: ACCAAGTTGTATTTCTAGCAAGCTGCAAGCAGAGCT...CCCAACAGTATGCTGATTCTCTTCTCTGCAGCATTGTGGGTGTACATACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATCTTAAGTTGTCTTTATaGTCAGTGGCTTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYLKLSL*SVASFP
Trigger: GGGAAAGGAAGCCACTGACAATAAAGACAACTTAAG...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp TTTCTTTCATACAAGGGAGGTCCGAGGCACTGGCCAAGCTCAAGAGGTGAATCATTCTTGTCTTTATCCTaGGATGCTTCTATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: FLSYKGGPRHWPSSRGESFLSLS*DASIAD
Trigger: ATCAGCTATAGAAGCATCCAAGGATAAAGACAAGAA...TGATTCACCTCTTGAGCTTGGCCAGTGCCTCGGACCTCCCTTGTATGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587314.1
CDS GCA 90 bp CCTGTGTGTCCAGGAACTACACTGATGAATAGCCGAAATAGTATATaGCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACGTGGTG +
Preference number: 5 (lower is better)
Translates to: PVCPGTTLMNSRNSI*QQEIQVLFINNYVV
Trigger: CACCACGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCATATACTATTTCGGCTATTCATCAGTGTAGTTCCTGGACACACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593097.5
CDS-3UTR CAA 90 bp ATATGCCAACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTAACAGGACAGCTCTGGGAGGTACTTTaGACATTTGGAGCCATTGCA +
Preference number: 5 (lower is better)
Translates to: ICQQEIQVLFINNYLTGQLWEVL*TFGAIA
Trigger: TGCAATGGCTCCAAATGTCAAAAGTACCTCCCAGAG...CTGTCCTGTTAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR CAA 90 bp ACACTGAGACATAAGTTTGCCATACAATGTACTGCAGCTCTCCTGACTTCAGGATTGGAAACAGACATTTaGGTAGGGCTCCTCCAAATA +
Preference number: 5 (lower is better)
Translates to: TLRHKFAIQCTAALLTSGLETDI*VGLLQI
Trigger: TATTTGGAGGAGCCCTACCAAAATGTCTGTTTCCAA...TCCTGAAGTCAGGAGAGCTGCAGTACATTGTATGGCAAACTTATGTCTCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590587.1
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTCTTTTTATTCAAAGTaGGTCGAGAAGCACTGGATT +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKSFYSK*VEKHWI
Trigger: AATCCAGTGCTTCTCGACCAACTTTGAATAAAAAGA...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GTGCTCTCTGATCAGGTGCTGCAGTGGAGTCTGGTTTATACTGCTGTATTAAGCTCTTTTTATTCAAAGTaGGTCGAGAAGCACTGGATT +
Preference number: 5 (lower is better)
Translates to: VLSDQVLQWSLVYTAVLSSFYSK*VEKHWI
Trigger: AATCCAGTGCTTCTCGACCAACTTTGAATAAAAAGA...GCTTAATACAGCAGTATAAACCAGACTCCACTGCAGCACCTGATCAGAGAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp AGATCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGACATCAATATTGCATTaGCTGCGTCTGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: RSYAQAQVFLLPPSTSRKTSILH*LRLQQI
Trigger: TATTTGTTGCAGACGCAGCAAATGCAATATTGATGT...CTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATACCTTGTCTTTATCCTaGGATGCTTCTATAGCTGAT +
Preference number: 5 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYTLSLS*DASIAD
Trigger: ATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGT...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp TCTTATGCTCAAGCTCAGGTCTTCCTACTGCCGCCTTCGACATCTAGAAAGTATGCATTGCTTTTTACCTaGTCTTTATCCTTGGATGCT +
Preference number: 5 (lower is better)
Translates to: SYAQAQVFLLPPSTSRKYALLFT*SLSLDA
Trigger: AGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC...ATACTTTCTAGATGTCGAAGGCGGCAGTAGGAAGACCTGAGCTTGAGCATAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS-3UTR CAA 90 bp GCATTGCTTTTTACCTTGTCTTTATCCTTGGATGCTTCTATAGCTGATCGTAACATCTGGTTCCAGACTTaGGTCAGCAGGCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: ALLFTLSLSLDASIADRNIWFQT*VSRLSF
Trigger: AAAACTCAGCCTGCTGACCAAAGTCTGGAACCAGAT...GTTACGATCAGCTATAGAAGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp CATCTCCCTCTGCTCCTGATTTTAAAAACTGTAGAATATAGGACTGGACCATATGTTCTTCCAGAAGCTTaGCTCCATGAAGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: HLPLLLILKTVEYRTGPYVLPEA*LHEAEW
Trigger: CCATTCAGCTTCATGGAGCAAAGCTTCTGGAAGAAC...ATATGGTCCAGTCCTATATTCTACAGTTTTTAAAATCAGGAGCAGAGGGAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TGCACTTGCAAATCACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAAGCATTGCTTTTTACCTaGTCTTTATCCTTGGATGCT +
Preference number: 5 (lower is better)
Translates to: CTCKSPLQAPSSRLESLKALLFT*SLSLDA
Trigger: AGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGC...TTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTGATTTGCAAGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp ACAGGAAATCCAAGTGCTGTTCATCAACAATTACCTGAATCAAGCTGTATAAAACCCCACCCCAAGGTCTaGCTCACTTCTTCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: TGNPSAVHQQLPESSCIKPHPKV*LTSSSL
Trigger: TAAAGAGGAAGAAGTGAGCAAGACCTTGGGGTGGGG...TTTTATACAGCTTGATTCAGGTAATTGTTGATGAACAGCACTTGGATTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592664.1
CDS-3UTR CAA 90 bp TGCACTTGCAAATCACCTCTCCAAGCTCCATCAAGTAGGCTTGAGTCATTGAAAACATCAATATTGCATTaGCTGCGTCTGCAACAAATA +
Preference number: 5 (lower is better)
Translates to: CTCKSPLQAPSSRLESLKTSILH*LRLQQI
Trigger: TATTTGTTGCAGACGCAGCAAATGCAATATTGATGT...TTTCAATGACTCAAGCCTACTTGATGGAGCTTGGAGAGGTGATTTGCAAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp TTCTGCAAATGTGGGTTTTTCTATATGAGAGGGTTGCAGAAAATGAAGCAAATTCGCACTTTGAAGTTCTaGCATGATGTCACGACCGAT +
Preference number: 5 (lower is better)
Translates to: FCKCGFFYMRGLQKMKQIRTLKF*HDVTTD
Trigger: ATCGGTCGTGACATCATGCAAGAACTTCAAAGTGCG...AATTTGCTTCATTTTCTGCAACCCTCTCATATAGAAAAACCCACATTTGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587003.5
CDS-3UTR CAA 90 bp AAAAGGTGGCAAAACAACCATATATTTAGTGTGTGGGATCACATTCTCCTAAAGCGAACATTCAGAGACTaGTCTTCAAGTGACATCAAT +
Preference number: 5 (lower is better)
Translates to: KRWQNNHIFSVWDHILLKRTFRD*SSSDIN
Trigger: ATTGATGTCACTTGAAGACAAGTCTCTGAATGTTCG...CTTTAGGAGAATGTGATCCCACACACTAAATATATGGTTGTTTTGCCACCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS-3UTR CAA 90 bp AAATGCCAAGAAGCTACTACTAAGAATGTATTCAAGAGACGGAAGTTCCAAGATTCTTTTTATTCAAAGTaGGTCGAGAAGCACTGGATT +
Preference number: 5 (lower is better)
Translates to: KCQEATTKNVFKRRKFQDSFYSK*VEKHWI
Trigger: AATCCAGTGCTTCTCGACCAACTTTGAATAAAAAGA...ATCTTGGAACTTCCGTCTCTTGAATACATTCTTAGTAGTAGCTTCTTGGCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000184956.11
CDS GCA 72 bp GATCGAAGAGCAGGTGGATCTCGGTGCGGGCGGAGCTaGTGTCATCCGGGCGCAGGGCGCAGAGCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: DRRAGGSRCGRS*CHPGAGRRAWQ
Trigger: CTGCCAGGCTCTGCGCCCTGCGCCCGGATGACAGCAGCTCCGCCCGCACCGAGATCCACCTGCTCTTCGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS GCA 72 bp AAACCCATTGCCTCGCTCAGGGATTGCTTCCCGCGGTaGCTCCCGCGGCTGCACGGAAGGCCACGAACCGAC +
Preference number: 6 (lower is better)
Translates to: KPIASLRDCFPR*LPRLHGRPRTD
Trigger: GTCGGTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCAATGGGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS CCA 72 bp CGGAGCTGCTGTCATCCGGGCGCAGGGCGCAGAGCCTaGCAGACAAGAGGCGAAACCCATTGCCTCGCTCAG +
Preference number: 6 (lower is better)
Translates to: RSCCHPGAGRRA*QTRGETHCLAQ
Trigger: CTGAGCGAGGCAATGGGTTTCGCCTCTTGTCTGCCAGGCTCTGCGCCCTGCGCCCGGATGACAGCAGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS CAA 90 bp AGAGCCTGGCAGACAAGAGGCGAAACCCATTGCCTCGCTCAGGGATaGCTTCCCGCGGTGCCTCCCGCGGCTGCACGGAAGGCCACGAAC +
Preference number: 6 (lower is better)
Translates to: RAWQTRGETHCLAQG*LPAVPPAAARKATN
Trigger: GTTCGTGGCCTTCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTTGTCTGCCAGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS GCA 72 bp AGACAAGAGGCGAAACCCATTGCCTCGCTCAGGGATTaGTTCCCGCGGTGCCTCCCGCGGCTGCACGGAAGG +
Preference number: 6 (lower is better)
Translates to: RQEAKPIASLRD*FPRCLPRLHGR
Trigger: CCTTCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTTGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS CAA 72 bp CAGACAAGAGGCGAAACCCATTGCCTCGCTCAGGGATaGCTTCCCGCGGTGCCTCCCGCGGCTGCACGGAAG +
Preference number: 6 (lower is better)
Translates to: QTRGETHCLAQG*LPAVPPAAARK
Trigger: CTTCCGTGCAGCCGCGGGAGGCACCGCGGGAAGCAATCCCTGAGCGAGGCAATGGGTTTCGCCTCTTGTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS TCA 72 bp GGGCCACGCCACTGCCCTCGCTGTAGTTCTCGGAGATaGGCTGATCGAAGAGCAGGTGGATCTCGGTGCGGG +
Preference number: 6 (lower is better)
Translates to: GPRHCPRCSSRR*ADRRAGGSRCG
Trigger: CCCGCACCGAGATCCACCTGCTCTTCGATCAGCTCATCTCCGAGAACTACAGCGAGGGCAGTGGCGTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000184956.11
ENST00000585712.1
ENST00000585976.5
ENST00000587003.5
ENST00000591074.1
ENST00000592664.1
ENST00000593097.5
ENST00000593228.5
ENST00000613428.4
CDS CCA 72 bp CGGCAGATTGCTGAAGGCCTCCAGTCGCATGGGGGATaGTTCGTAGGTGCTTCCTGCTGCAGAGCCAGCATC +
Preference number: 6 (lower is better)
Translates to: RQIAEGLQSHGG*FVGASCCRASI
Trigger: GATGCTGGCTCTGCAGCAGGAAGCACCTACGAACCATCCCCCATGCGACTGGAGGCCTTCAGCAATCTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585976.5
ENST00000613428.4
CDS TCA 72 bp GAAGAATGGTGTAAACTCGGGAGGCGGAGCTTGCTGTaGGCTGAGATCGCGCCACACTCCAGCCTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: EEWCKLGRRSLL*AEIAPHSSLGN
Trigger: GTTGCCCAGGCTGGAGTGTGGCGCGATCTCAGCTCACAGCAAGCTCCGCCTCCCGAGTTTACACCATTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591074.1
ENST00000593097.5
CDS GCA 72 bp TCATTCAGCCCGAGCAGCACTGTGATGCACAGCATCTaGCTGTCATTCGGCAGATTGCTGAAGGCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: SFSPSSTVMHSI*LSFGRLLKASS
Trigger: ACTGGAGGCCTTCAGCAATCTGCCGAATGACAGGCAGATGCTGTGCATCACAGTGCTGCTCGGGCTGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585976.5
ENST00000613428.4
CDS TCA 72 bp GATTGCTGTGGTTTGATAGGTGTTCGCCCATCATACTaGGGAAGCGGAGTTGGGTATAACACCGTGGGCATC +
Preference number: 6 (lower is better)
Translates to: DCCGLIGVRPSY*GSGVGYNTVGI
Trigger: GATGCCCACGGTGTTATACCCAACTCCGCTTCCTCAGTATGATGGGCGAACACCTATCAAACCACAGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000587003.5
ENST00000613428.4
CDS GCA 72 bp AGCAGCTCTGGGAGGTACTTTGACATTTGGAGCCATTaGAGTACACCAGAGCTGCCAGGGCTTGAAGAATTT +
Preference number: 6 (lower is better)
Translates to: SSSGRYFDIWSH*STPELPGLEEF
Trigger: AAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTCAAAGTACCTCCCAGAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613428.4
CDS CCA 72 bp CATCATACTGAGGAAGCGGAGTTGGGTATAACACCGTaGGCATCTCTATGTTTAGTCCAGGGAGTCCGTGAA +
Preference number: 6 (lower is better)
Translates to: HHTEEAELGITP*ASLCLVQGVRE
Trigger: TTCACGGACTCCCTGGACTAAACATAGAGATGCCCACGGTGTTATACCCAACTCCGCTTCCTCAGTATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000587003.5
ENST00000613428.4
CDS CAA 90 bp CTGCCGCCTTCGACATCTAGAAAGTATGGTGGGATCTTCACTGATTaGTTAACCCTGGGAGTGCCCCTTGTGATCCAGATGAGTCAAAAC +
Preference number: 6 (lower is better)
Translates to: LPPSTSRKYGGIFTD*LTLGVPLVIQMSQN
Trigger: GTTTTGACTCATCTGGATCACAAGGGGCACTCCCAGGGTTAACAAATCAGTGAAGATCCCACCATACTTTCTAGATGTCGAAGGCGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS GCA 72 bp GAGCCAAGTCACTCAACTTCATTAAGAGTCCGGTGTTaGCTAGCAGCTCTGGGAGGTACTTTGACATTTGGA +
Preference number: 6 (lower is better)
Translates to: EPSHSTSLRVRC*LAALGGTLTFG
Trigger: TCCAAATGTCAAAGTACCTCCCAGAGCTGCTAGGCAACACCGGACTCTTAATGAAGTTGAGTGACTTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613428.4
CDS CAA 90 bp ACTTTGACATTTGGAGCCATTGCAGTACACCAGAGCTGCCAGGGCTaGAAGAATTTCCCTGTGTGTCCAGGAACTACACTGATGAATAGC +
Preference number: 6 (lower is better)
Translates to: TLTFGAIAVHQSCQG*KNFPVCPGTTLMNS
Trigger: GCTATTCATCAGTGTAGTTCCTGGACACACAGGGAAATTCTTCAAGCCCTGGCAGCTCTGGTGTACTGCAATGGCTCCAAATGTCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613428.4
CDS CAA 72 bp TCGACATCTAGAAAGTATGGTGGGATCTTCACTGATTaGTTAACCCTGGGAGTGCCCCTTGTGATCCAGATG +
Preference number: 6 (lower is better)
Translates to: STSRKYGGIFTD*LTLGVPLVIQM
Trigger: CATCTGGATCACAAGGGGCACTCCCAGGGTTAACAAATCAGTGAAGATCCCACCATACTTTCTAGATGTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000613428.4
CDS GCA 72 bp ATAGCCGAAATAGTATATGCCAACAGGAAATCCAAGTaGTGTTCATCAACAATTACGTGGTGGCGGGTGCCT +
Preference number: 6 (lower is better)
Translates to: IAEIVYANRKSK*CSSTITWWRVP
Trigger: AGGCACCCGCCACCACGTAATTGTTGATGAACAGCACTTGGATTTCCTGTTGGCATATACTATTTCGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593097.5
CDS TCA 72 bp CTTTTTATTCAAAGTTGGTCGAGAAGCACTGGATTCTaGTTGCTGTGGTTTGATAGGTGTTCGCCCATCATA +
Preference number: 6 (lower is better)
Translates to: LFIQSWSRSTGF*LLWFDRCSPII
Trigger: TATGATGGGCGAACACCTATCAAACCACAGCAATCAGAATCCAGTGCTTCTCGACCAACTTTGAATAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000184956.11
ENST00000585976.5
ENST00000587003.5
ENST00000613428.4
CDS GCA 72 bp GTAAGACCTTTCATAACTACCTCATTTTACTCTGCATaGCTCCTTCAGCATCAGAAAAGTCTGACTCACTAC +
Preference number: 6 (lower is better)
Translates to: VRPFITTSFYSA*LLQHQKSLTHY
Trigger: GTAGTGAGTCAGACTTTTCTGATGCTGAAGGAGGCATGCAGAGTAAAATGAGGTAGTTATGAAAGGTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587003.5