RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HDX (Homo sapiens)

Ensembl gene IDs: ENSG00000165259

Ensembl transcript IDs: ENST00000297977.9, ENST00000373177.3, ENST00000449553.2, ENST00000465509.3, ENST00000472135.2, ENST00000506585.6

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGTTGTATATGGGGGCGACTCTTCATCTCATGGAGGAGTTGGTGTaGCTGGTACATTTAATCGTAATATCTGAGGCTCTGTTACTCTCT +
Preference number: 1 (lower is better)
Translates to: SLYMGATLHLMEELV*LVHLIVISEALLLS
Trigger: AGAGAGTAACAGAGCCTCAGATATTACGATTAAATGTACCAGTCACACCAACTCCTCCATGAGATGAAGAGTCGCCCCCATATACAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR CCA 90 bp AGGAGAGACTTGAAGGCCTGGAATTTGTTCATGCTACTTAATAAGTaGTTTCTAACTTCGTTGTATATGGGGGCGACTCTTCATCTCATG +
Preference number: 1 (lower is better)
Translates to: RRDLKAWNLFMLLNK*FLTSLYMGATLHLM
Trigger: CATGAGATGAAGAGTCGCCCCCATATACAACGAAGTTAGAAACCACTTATTAAGTAGCATGAACAAATTCCAGGCCTTCAAGTCTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR CCA 90 bp AAACTCAATGACTATGAAGCAGACCCTAGGAGAGACTTGAAGGCCTaGAATTTGTTCATGCTACTTAATAAGTGGTTTCTAACTTCGTTG +
Preference number: 1 (lower is better)
Translates to: KLNDYEADPRRDLKA*NLFMLLNKWFLTSL
Trigger: CAACGAAGTTAGAAACCACTTATTAAGTAGCATGAACAAATTCCAGGCCTTCAAGTCTCTCCTAGGGTCTGCTTCATAGTCATTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR TCA 90 bp TTGTTTGCAAAACTCCATATGGCTCAAGGAAGCATATCTGAACACTaGAATATTCCTACTAACAAAGGGACCATATCAGTAGTATGGCAG +
Preference number: 1 (lower is better)
Translates to: LFAKLHMAQGSISEH*NIPTNKGTISVVWQ
Trigger: CTGCCATACTACTGATATGGTCCCTTTGTTAGTAGGAATATTTCAGTGTTCAGATATGCTTCCTTGAGCCATATGGAGTTTTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR TCA 90 bp GTTTTCCCAACTAAAGAATACCAGGGCAACAGAATGCAGTTATCTTaGAATGCACACCTGTTACGAAGCCAAAAGACTGTATCATATATT +
Preference number: 1 (lower is better)
Translates to: VFPTKEYQGNRMQLS*NAHLLRSQKTVSYI
Trigger: AATATATGATACAGTCTTTTGGCTTCGTAACAGGTGTGCATTTCAAGATAACTGCATTCTGTTGCCCTGGTATTCTTTAGTTGGGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR CCA 90 bp GACTTGTCAGCAAGAAAAACTAACTATTGTTTGCAAAACTCCATATaGCTCAAGGAAGCATATCTGAACACTGAAATATTCCTACTAACA +
Preference number: 1 (lower is better)
Translates to: DLSARKTNYCLQNSI*LKEAYLNTEIFLLT
Trigger: TGTTAGTAGGAATATTTCAGTGTTCAGATATGCTTCCTTGAGCCATATGGAGTTTTGCAAACAATAGTTAGTTTTTCTTGCTGACAAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAATACTATCCTTGGCTaGTGGCTCTGTACAGGCCTC +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSNTILG*WLCTGL
Trigger: GAGGCCTGTACAGAGCCATCAGCCAAGGATAGTATT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTGGCTTCTGTCTCCCTaGGAGAGCCTTCAGATAGTA +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSWLLSP*ESLQIV
Trigger: TACTATCTGAAGGCTCTCTCAGGGAGACAGAAGCCA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTGGCTTCTGTCTCCCTaGGAGAGCCTTCAGATAGTA +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNWLLSP*ESLQIV
Trigger: TACTATCTGAAGGCTCTCTCAGGGAGACAGAAGCCA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACGTGTGTGTGGGAGGATaGGACACTTCAAGGGTAAAG +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNVCVGG*DTSRVK
Trigger: CTTTACCCTTGAAGTGTCCCATCCTCCCACACACAC...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCGACTCTTCATCTCATaGAGGAGTTGGTGTGACTGG +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSRLFIS*RSWCDW
Trigger: CCAGTCACACCAACTCCTCCATGAGATGAAGAGTCG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR CAA 90 bp TCACAAGTTAGTAGCCTCCTTGATTATAGCATTACAGAGCATAGCTaGGTGAAGAGCATGATACAGTGCTGTCTGCCAAGGAAAATACCA +
Preference number: 2 (lower is better)
Translates to: SQVSSLLDYSITEHS*VKSMIQCCLPRKIP
Trigger: TGGTATTTTCCTTGGCAGACAGCACTGTATCATGCTCTTCACCAAGCTATGCTCTGTAATGCTATAATCAAGGAGGCTACTAACTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAAATACTATCCTTGGCTaGTGGCTCTGTACAGGCCTC +
Preference number: 2 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRNTILG*WLCTGL
Trigger: GAGGCCTGTACAGAGCCATCAGCCAAGGATAGTATT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCAGAAACTTGATGGCTaGAACAGCCATCCAGCTACT +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNQKLDG*NSHPAT
Trigger: AGTAGCTGGATGGCTGTTTCAGCCATCAAGTTTCTG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTCGACTCTTCATCTCATaGAGGAGTTGGTGTGACTGG +
Preference number: 2 (lower is better)
Translates to: RGISFSSCYRIATFHFRSRLFIS*RSWCDW
Trigger: CCAGTCACACCAACTCCTCCATGAGATGAAGAGTCG...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTAATACTATCCTTGGCTaGTGGCTCTGTACAGGCCTC +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTNTILG*WLCTGL
Trigger: GAGGCCTGTACAGAGCCATCAGCCAAGGATAGTATT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACAGAAACTTGATGGCTaGAACAGCCATCCAGCTACT +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRQKLDG*NSHPAT
Trigger: AGTAGCTGGATGGCTGTTTCAGCCATCAAGTTTCTG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCTCTGCTGCTTTCTCTaGATGGAATTTGACTTGTCA +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSLCCFL*MEFDLS
Trigger: TGACAAGTCAAATTCCATTCAGAGAAAGCAGCAGAG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCATCCCCAGTTTCCATaGAGAGGCCAATTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSHPQFP*RGQFSF
Trigger: AAAAGAAAATTGGCCTCTTCATGGAAACTGGGGATG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACGCAGTTATCTTGAAATaGACACCTGTTACGAAGCCA +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNAVILK*TPVTKP
Trigger: TGGCTTCGTAACAGGTGTGCATTTCAAGATAACTGC...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCAGTCTACAGTGTGTTaGCATCTGGTACCTACTAAT +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNQSTVC*HLVPTN
Trigger: ATTAGTAGGTACCAGATGGCAACACACTGTAGACTG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCAGTCTACAGTGTGTTaGCATCTGGTACCTACTAAT +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSQSTVC*HLVPTN
Trigger: ATTAGTAGGTACCAGATGGCAACACACTGTAGACTG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTACCATGCAACACAATTaGACACTGCCAAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSTMQHN*TLPSHK
Trigger: TTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCCTCACAATAGATGTTaGTGTCTTTGGAGAAATGGC +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSPHNRC*CLWRNG
Trigger: GCCATTTCTCCAAAGACAGCAACATCTATTGTGAGG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAACTATCCCTTGGAAATaGGCTGAATCCGATTCCCAC +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRTIPWK*AESDSH
Trigger: GTGGGAATCGGATTCAGCCCATTTCCAAGGGATAGT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTACTATCCCTTGGAAATaGGCTGAATCCGATTCCCAC +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTTIPWK*AESDSH
Trigger: GTGGGAATCGGATTCAGCCCATTTCCAAGGGATAGT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGAAGAAACTATCCCTTaGAAATGGGCTGAATCCGAT +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSEETIP*KWAESD
Trigger: ATCGGATTCAGCCCATTTCCAAGGGATAGTTTCTTC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR CAA 90 bp AATGACTATGAAGCAGACCCTAGGAGAGACTTGAAGGCCTGGAATTaGTTCATGCTACTTAATAAGTGGTTTCTAACTTCGTTGTATATG +
Preference number: 2 (lower is better)
Translates to: NDYEADPRRDLKAWN*FMLLNKWFLTSLYM
Trigger: CATATACAACGAAGTTAGAAACCACTTATTAAGTAGCATGAACAAATTCCAGGCCTTCAAGTCTCTCCTAGGGTCTGCTTCATAGTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAGAATGCAGTTATCTTaGAATGCACACCTGTTACGA +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNRMQLS*NAHLLR
Trigger: TCGTAACAGGTGTGCATTTCAAGATAACTGCATTCT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAGAATGCAGTTATCTTaGAATGCACACCTGTTACGA +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSRMQLS*NAHLLR
Trigger: TCGTAACAGGTGTGCATTTCAAGATAACTGCATTCT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGGCCTCATATGGAAATaGGGTAAATTTTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSGLIWK*GKFCGK
Trigger: TTTGCCACAAAATTTACCTCATTTCCATATGAGGCC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTCTCTGCTGCTTTCTCTaGATGGAATTTGACTTGTCA +
Preference number: 2 (lower is better)
Translates to: RGISFSSCYRIATFHFRSLCCFL*MEFDLS
Trigger: TGACAAGTCAAATTCCATTCAGAGAAAGCAGCAGAG...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTACCATGCAACACAATTaGACACTGCCAAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: RGISFSSCYRIATFHFRSTMQHN*TLPSHK
Trigger: TTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAACCTATTTGTGTGTGTaGGAGGATGGGACACTTCAA +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRTYLCV*EDGTLQ
Trigger: TTGAAGTGTCCCATCCTCCCACACACACAAATAGGT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCATCTTTTGAGGTCTTaGTCGAATAAAGAGTACAGG +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSHLLRS*SNKEYR
Trigger: CCTGTACTCTTTATTCGACCAAGACCTCAAAAGATG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAGGCCTCATATGGAAATaGGGTAAATTTTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRGLIWK*GKFCGK
Trigger: TTTGCCACAAAATTTACCTCATTTCCATATGAGGCC...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTCAAGGAAGCATATCTaGACACTGAAATATTCCTAC +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSSRKHI*TLKYSY
Trigger: GTAGGAATATTTCAGTGTTCAGATATGCTTCCTTGA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCTCTGCTGCTTTCTCTaGATGGAATTTGACTTGTCA +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTLCCFL*MEFDLS
Trigger: TGACAAGTCAAATTCCATTCAGAGAAAGCAGCAGAG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCATCCCCAGTTTCCATaGAGAGGCCAATTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTHPQFP*RGQFSF
Trigger: AAAAGAAAATTGGCCTCTTCATGGAAACTGGGGATG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAGCAGTTATCTTGAAATaGACACCTGTTACGAAGCCA +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRAVILK*TPVTKP
Trigger: TGGCTTCGTAACAGGTGTGCATTTCAAGATAACTGC...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGGCAGTTATCTTGAAATaGACACCTGTTACGAAGCCA +
Preference number: 2 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMAVILK*TPVTKP
Trigger: TGGCTTCGTAACAGGTGTGCATTTCAAGATAACTGC...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACAGTCTACAGTGTGTTaGCATCTGGTACCTACTAAT +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRQSTVC*HLVPTN
Trigger: ATTAGTAGGTACCAGATGGCAACACACTGTAGACTG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACATTTCCTTCAGTTCCTaGTACAGAATAGCCACATTT +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNISFSS*YRIATF
Trigger: AAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAAT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACCTCACAATAGATGTTaGTGTCTTTGGAGAAATGGC +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRPHNRC*CLWRNG
Trigger: GCCATTTCTCCAAAGACAGCAACATCTATTGTGAGG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTTTGAATACTATCCTTaGCTGATGGCTCTGTACAGG +
Preference number: 2 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMFEYYP*LMALYR
Trigger: CCTGTACAGAGCCATCAGCCAAGGATAGTATTCAAA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCAGTGTGTTGCCATCTaGTACCTACTAATAATAGAA +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSQCVAI*YLLIIE
Trigger: TTCTATTATTAGTAGGTACCAGATGGCAACACACTG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACATGAAAGACTATCAGTaGGAGCTTACCTATTTGTGT +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNMKDYQ*ELTYLC
Trigger: ACACAAATAGGTAAGCTCCCACTGATAGTCTTTCAT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTATCACATGCTTGCAATaGCAATACAAAAATCCTGCT +
Preference number: 2 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSITCLQ*QYKNPA
Trigger: AGCAGGATTTTTGTATTGCCATTGCAAGCATGTGAT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTAGAATGCAGTTATCTTaGAATGCACACCTGTTACGA +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTRMQLS*NAHLLR
Trigger: TCGTAACAGGTGTGCATTTCAAGATAACTGCATTCT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTCAAGGAAGCATATCTaGACACTGAAATATTCCTAC +
Preference number: 2 (lower is better)
Translates to: RGISFSSCYRIATFHFRSSRKHI*TLKYSY
Trigger: GTAGGAATATTTCAGTGTTCAGATATGCTTCCTTGA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATTTAATCGTAATATCTaGGGCTCTGTTACTCTCTGC +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRFNRNI*GSVTLC
Trigger: GCAGAGAGTAACAGAGCCTCAGATATTACGATTAAA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCACCTACATTTTTGTTaGACTGTAGCCATTATATCT +
Preference number: 2 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNHLHFC*TVAIIS
Trigger: AGATATAATGGCTACAGTGCAACAAAAATGTAGGTG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACTTGGTAATACCATCTaGTACTCCAGAAAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRLGNTI*YSRKEE
Trigger: TTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATTGCAAAACTCCATATaGCTCAAGGAAGCATATCTG +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRLQNSI*LKEAYL
Trigger: CAGATATGCTTCCTTGAGCCATATGGAGTTTTGCAA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAGAGACTTGAAGGCCTaGAATTTGTTCATGCTACTT +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRRDLKA*NLFMLL
Trigger: AAGTAGCATGAACAAATTCCAGGCCTTCAAGTCTCT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACATCTTTTGAGGTCTTaGTCGAATAAAGAGTACAGG +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRHLLRS*SNKEYR
Trigger: CCTGTACTCTTTATTCGACCAAGACCTCAAAAGATG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTTCTCTGAATGGAATTTaGCTTGTCAGCAAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTSLNGI*LVSKKN
Trigger: GTTTTTCTTGCTGACAAGTCAAATTCCATTCAGAGA...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCTAATGGCTGATGCGTaGCAAATAAAATCTATAGTG +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTLMADA*QIKSIV
Trigger: CACTATAGATTTTATTTGTCACGCATCAGCCATTAG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTATTTCCTTCAGTTCCTaGTACAGAATAGCCACATTT +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTISFSS*YRIATF
Trigger: AAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAAT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATTCTGGCTTAAAAACTaGTTGGCTGTTCTAAGCTTA +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRFWLKN*LAVLSL
Trigger: TAAGCTTAGAACAGCCAAGCAGTTTTTAAGCCAGAA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCAGTGTGTTGCCATCTaGTACCTACTAATAATAGAA +
Preference number: 2 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTQCVAI*YLLIIE
Trigger: TTCTATTATTAGTAGGTACCAGATGGCAACACACTG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCAGTGTGTTGCCATCTaGTACCTACTAATAATAGAA +
Preference number: 2 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMQCVAI*YLLIIE
Trigger: TTCTATTATTAGTAGGTACCAGATGGCAACACACTG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAATGAAAGACTATCAGTaGGAGCTTACCTATTTGTGT +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRMKDYQ*ELTYLC
Trigger: ACACAAATAGGTAAGCTCCCACTGATAGTCTTTCAT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAATCACATGCTTGCAATaGCAATACAAAAATCCTGCT +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRITCLQ*QYKNPA
Trigger: AGCAGGATTTTTGTATTGCCATTGCAAGCATGTGAT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR GCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCACCTACATTTTTGTTaGACTGTAGCCATTATATCT +
Preference number: 2 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMHLHFC*TVAIIS
Trigger: AGATATAATGGCTACAGTGCAACAAAAATGTAGGTG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATTACATACACATTTCTaGCTTAAAAACTGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRLHTHF*LKNCLA
Trigger: AGCCAAGCAGTTTTTAAGCCAGAAATGTGTATGTAA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGACCCTAGGAGAGACTaGAAGGCCTGGAATTTGTTC +
Preference number: 3 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSDPRRD*KAWNLF
Trigger: GAACAAATTCCAGGCCTTCAAGTCTCTCCTAGGGTC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR CCA 72 bp GACTATGAAGCAGACCCTAGGAGAGACTTGAAGGCCTaGAATTTGTTCATGCTACTTAATAAGTGGTTTCTA +
Preference number: 3 (lower is better)
Translates to: DYEADPRRDLKA*NLFMLLNKWFL
Trigger: TAGAAACCACTTATTAAGTAGCATGAACAAATTCCAGGCCTTCAAGTCTCTCCTAGGGTCTGCTTCATAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACCAGAATGCAGTTATCTaGAAATGCACACCTGTTACG +
Preference number: 3 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYQNAVI*KCTPVT
Trigger: CGTAACAGGTGTGCATTTCAAGATAACTGCATTCTG...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAGAAAACTGGGTAGCTaGCCCATTTTAGGTGTGTAC +
Preference number: 3 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNRKLGS*PILGVY
Trigger: GTACACACCTAAAATGGGCAAGCTACCCAGTTTTCT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAACCATGCAACACAATaGCACACTGCCAAGTCACAA +
Preference number: 3 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNNHATQ*HTAKSQ
Trigger: TTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTGGTTTCTAACTTCGTaGTATATGGGGGCGACTCTT +
Preference number: 3 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSWFLTS*YMGATL
Trigger: AAGAGTCGCCCCCATATACAACGAAGTTAGAAACCA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTCTCAGCAGCTTACCTaGACTTCCTGTTTCATAACA +
Preference number: 3 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNSQQLT*TSCFIT
Trigger: TGTTATGAAACAGGAAGTCAAGGTAAGCTGCTGAGA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTCTCAGCAGCTTACCTaGACTTCCTGTTTCATAACA +
Preference number: 3 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSSQQLT*TSCFIT
Trigger: TGTTATGAAACAGGAAGTCAAGGTAAGCTGCTGAGA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTAGAAAACTGGGTAGCTaGCCCATTTTAGGTGTGTAC +
Preference number: 3 (lower is better)
Translates to: RGISFSSCYRIATFHFRSRKLGS*PILGVY
Trigger: GTACACACCTAAAATGGGCAAGCTACCCAGTTTTCT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACATTGGAAACAGAAACTaGATGGCTGAAACAGCCATC +
Preference number: 3 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNIGNRN*MAETAI
Trigger: GATGGCTGTTTCAGCCATCAAGTTTCTGTTTCCAAT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTGTGATGTTTACAGCTaGCTGAGAAATCCAATGTCC +
Preference number: 3 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSCDVYS*LRNPMS
Trigger: GGACATTGGATTTCTCAGCAAGCTGTAAACATCACA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGGAGAAATGGCTTCTTaGACATCTTTTGAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSGEMAS*TSFEVL
Trigger: CAAGACCTCAAAAGATGTCAAAGAAGCCATTTCTCC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR GCA 72 bp AGAATACCAGGGCAACAGAATGCAGTTATCTTGAAATaGACACCTGTTACGAAGCCAAAAGACTGTATCATA +
Preference number: 3 (lower is better)
Translates to: RIPGQQNAVILK*TPVTKPKDCII
Trigger: TATGATACAGTCTTTTGGCTTCGTAACAGGTGTGCATTTCAAGATAACTGCATTCTGTTGCCCTGGTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTAGAAAACTGGGTAGCTaGCCCATTTTAGGTGTGTAC +
Preference number: 3 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTRKLGS*PILGVY
Trigger: GTACACACCTAAAATGGGCAAGCTACCCAGTTTTCT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAACCATGCAACACAATaGCACACTGCCAAGTCACAA +
Preference number: 3 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRNHATQ*HTAKSQ
Trigger: TTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTAACCATGCAACACAATaGCACACTGCCAAGTCACAA +
Preference number: 3 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTNHATQ*HTAKSQ
Trigger: TTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATGGTTTCTAACTTCGTaGTATATGGGGGCGACTCTT +
Preference number: 3 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRWFLTS*YMGATL
Trigger: AAGAGTCGCCCCCATATACAACGAAGTTAGAAACCA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTGTGATGTTTACAGCTaGCTGAGAAATCCAATGTCC +
Preference number: 3 (lower is better)
Translates to: RGISFSSCYRIATFHFRSCDVYS*LRNPMS
Trigger: GGACATTGGATTTCTCAGCAAGCTGTAAACATCACA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTACAAAAATCCTGCTGTaGATAACTGACCTTAGGACA +
Preference number: 3 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSTKILL*ITDLRT
Trigger: TGTCCTAAGGTCAGTTATCAACAGCAGGATTTTTGT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACACAAAAATCCTGCTGTaGATAACTGACCTTAGGACA +
Preference number: 3 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNTKILL*ITDLRT
Trigger: TGTCCTAAGGTCAGTTATCAACAGCAGGATTTTTGT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR CCA 72 bp AACCAAAGTAGTATAACTCTTTTTGAATACTATCCTTaGCTGATGGCTCTGTACAGGCCTCATATGGAAATG +
Preference number: 3 (lower is better)
Translates to: NQSSITLFEYYP*LMALYRPHMEM
Trigger: CATTTCCATATGAGGCCTGTACAGAGCCATCAGCCAAGGATAGTATTCAAAAAGAGTTATACTACTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCAGAATGCAGTTATCTaGAAATGCACACCTGTTACG +
Preference number: 3 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTQNAVI*KCTPVT
Trigger: CGTAACAGGTGTGCATTTCAAGATAACTGCATTCTG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTATTGGAAACAGAAACTaGATGGCTGAAACAGCCATC +
Preference number: 3 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTIGNRN*MAETAI
Trigger: GATGGCTGTTTCAGCCATCAAGTTTCTGTTTCCAAT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR TCA 72 bp AAACTCCATATGGCTCAAGGAAGCATATCTGAACACTaGAATATTCCTACTAACAAAGGGACCATATCAGTA +
Preference number: 3 (lower is better)
Translates to: KLHMAQGSISEH*NIPTNKGTISV
Trigger: TACTGATATGGTCCCTTTGTTAGTAGGAATATTTCAGTGTTCAGATATGCTTCCTTGAGCCATATGGAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATCAAGCTGTAGCAACTaGATAAGCAATGCTGAAATG +
Preference number: 3 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRSSCSN*ISNAEM
Trigger: CATTTCAGCATTGCTTATCAAGTTGCTACAGCTTGA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATGGCTTAAAAACTGCTaGGCTGTTCTAAGCTTAAAG +
Preference number: 3 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRWLKNC*AVLSLK
Trigger: CTTTAAGCTTAGAACAGCCAAGCAGTTTTTAAGCCA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTACAAAAATCCTGCTGTaGATAACTGACCTTAGGACA +
Preference number: 3 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTTKILL*ITDLRT
Trigger: TGTCCTAAGGTCAGTTATCAACAGCAGGATTTTTGT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTTCACCTACATTTTTGTaGCACTGTAGCCATTATATC +
Preference number: 3 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTSPTFL*HCSHYI
Trigger: GATATAATGGCTACAGTGCAACAAAAATGTAGGTGA...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATCACCTACATTTTTGTaGCACTGTAGCCATTATATC +
Preference number: 3 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRSPTFL*HCSHYI
Trigger: GATATAATGGCTACAGTGCAACAAAAATGTAGGTGA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR TCA 72 bp GCTGTAGGAGAGAATATACCTATAGTTAATTTGCAATaGGAACCAAATAAGAAGGGGCTTAAATTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: AVGENIPIVNLQ*EPNKKGLKLKQ
Trigger: CTGCTTCAATTTAAGCCCCTTCTTATTTGGTTCTCATTGCAAATTAACTATAGGTATATTCTCTCCTACAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR GCA 72 bp TTAGGTATAGATAGTAATTTAACCATGCAACACAATTaGACACTGCCAAGTCACAAATATATGACACTGTGG +
Preference number: 3 (lower is better)
Translates to: LGIDSNLTMQHN*TLPSHKYMTLW
Trigger: CCACAGTGTCATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATCTATACCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACCCCAGATCAGGCCGCTaGTGGGGCAGGCGGATTCAG +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYPRSGR*WGRRIQ
Trigger: CTGAATCCGCCTGCCCCAGCAGCGGCCTGATCTGGG...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGATCAGGCCGCTGCTaGGGCAGGCGGATTCAGCGA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYRSGRC*GRRIQR
Trigger: TCGCTGAATCCGCCTGCCCCAGCAGCGGCCTGATCT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACCCAGATCAGGCCGCTaGTGGGGCAGGCGGATTCAG +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRPRSGR*WGRRIQ
Trigger: CTGAATCCGCCTGCCCCAGCAGCGGCCTGATCTGGG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAGATCAGGCCGCTGCTaGGGCAGGCGGATTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSRSGRC*GRRIQR
Trigger: TCGCTGAATCCGCCTGCCCCAGCAGCGGCCTGATCT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAGATCAGGCCGCTGCTaGGGCAGGCGGATTCAGCGA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNRSGRC*GRRIQR
Trigger: TCGCTGAATCCGCCTGCCCCAGCAGCGGCCTGATCT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGCAGGGCCTCCTCTTaGAGGTGGAACTTCAATCCC +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYSRASS*RWNFNP
Trigger: GGGATTGAAGTTCCACCTCCAAGAGGAGGCCCTGCT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTCTCGGTCACTGAACTaGGTGCGGTCCTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNSRSLN*VRSCSA
Trigger: AGCACTACAGGACCGCACTCAGTTCAGTGACCGAGA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACCTAAGTCTCGGTCACTaGACTGAGTGCGGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYLSLGH*TECGPV
Trigger: TACAGGACCGCACTCAGTTCAGTGACCGAGACTTAG...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACCCTTGGAAATGGGCTaGATCCGATTCCCACCACCC +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRPLEMG*IRFPPP
Trigger: GGGTGGTGGGAATCGGATTCAGCCCATTTCCAAGGG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGAACCAGACTCAGGCTaGTCAGAGAAATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYEPDSG*SEKSAG
Trigger: CCCTGCTGATTTCTCTGAGCAGCCTGAGTCTGGTTC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGTAGCTCGGGTGTGGTaGGGTTACGAAAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYVARVW*GYERNQ
Trigger: CTGATTCCTTTCGTAACCGCACCACACCCGAGCTAC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTCTCGGTCACTGAACTaGGTGCGGTCCTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSSRSLN*VRSCSA
Trigger: AGCACTACAGGACCGCACTCAGTTCAGTGACCGAGA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCTAAGTCTCGGTCACTaGACTGAGTGCGGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNLSLGH*TECGPV
Trigger: TACAGGACCGCACTCAGTTCAGTGACCGAGACTTAG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCCCTTGGAAATGGGCTaGATCCGATTCCCACCACCC +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMPLEMG*IRFPPP
Trigger: GGGTGGTGGGAATCGGATTCAGCCCATTTCCAAGGG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGCCCAGGCTGGTCATaGCATTGTCCCAATACTTCT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYSPGWS*HCPNTS
Trigger: AGAAGTATTGGGACAATGGCATGACCAGCCTGGGCT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACGAACCAGACTCAGGCTaGTCAGAGAAATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNEPDSG*SEKSAG
Trigger: CCCTGCTGATTTCTCTGAGCAGCCTGAGTCTGGTTC...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGTCCAAGAAGACTGCTaGCTTGAGGGTCGAGCAATA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYVQEDC*LEGRAI
Trigger: TATTGCTCGACCCTCAAGCCAGCAGTCTTCTTGGAC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAAACAGAGCCCAGGCTaGTCATGCCATTGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYKQSPG*SCHCPN
Trigger: ATTGGGACAATGGCATGACCAGCCTGGGCTCTGTTT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAACAATTTCCTTCTGCTaGGCTAGGCTTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRTISFC*ARLLWG
Trigger: GCCCCACAGAAGCCTAGCTCAGCAGAAGGAAATTGT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATCTCGGTCACTGAACTaGGTGCGGTCCTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRSRSLN*VRSCSA
Trigger: AGCACTACAGGACCGCACTCAGTTCAGTGACCGAGA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCTTCCTCTCCTGGTGTaGGTGCAGATAAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNLPLLV*VQIKNQ
Trigger: CTGGTTCTTTATCTGCACTCACACCAGGAGAGGAAG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCTTCCTCTCCTGGTGTaGGTGCAGATAAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSLPLLV*VQIKNQ
Trigger: CTGGTTCTTTATCTGCACTCACACCAGGAGAGGAAG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTGGTCCTCTTCCTTATaGGCCCTTGCATCATTCGGA +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSWSSSL*ALASFG
Trigger: TCCGAATGATGCAAGGGCTCATAAGGAAGAGGACCA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTGGTCCTCTTCCTTATaGGCCCTTGCATCATTCGGA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNWSSSL*ALASFG
Trigger: TCCGAATGATGCAAGGGCTCATAAGGAAGAGGACCA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACCAGAAACTTGATGGCTaGAACAGCCATCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYQKLDG*NSHPAT
Trigger: AGTAGCTGGATGGCTGTTTCAGCCATCAAGTTTCTG...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAGATGTCCAAGAAGACTaGTGGCTTGAGGGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRDVQED*WLEGRA
Trigger: TGCTCGACCCTCAAGCCAGCAGTCTTCTTGGACATC...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACATAGCTTGGTATCTGTaGTCTCATCGATGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYIAWYL*SHRCQL
Trigger: GAGCTGGCATCGATGAGAGCACAGATACCAAGCTAT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAGCCCAGGCTGGTCATaGCATTGTCCCAATACTTCT +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNSPGWS*HCPNTS
Trigger: AGAAGTATTGGGACAATGGCATGACCAGCCTGGGCT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAGTAGCTCGGGTGTGGTaGGGTTACGAAAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRVARVW*GYERNQ
Trigger: CTGATTCCTTTCGTAACCGCACCACACCCGAGCTAC...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACAGCGAGATTTTTCCTaGGTCTCCAGTGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRQRDFS*VSSAAS
Trigger: TGAAGCGGCACTGGAGACCCAGGAAAAATCTCGCTG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGATTCATCTCGGGTGTaGTGCGGTTACGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYDSSRV*CGYERN
Trigger: ATTCCTTTCGTAACCGCACCACACCCGAGATGAATC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297977.9
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGGCAAGGTTGTACTTTaGTTCTCAGCTCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYGKVVL*FSARRE
Trigger: TTCCCTTCGAGCTGAGAACCAAAGTACAACCTTGCC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTGGCATATTTCTTCCTaGTCCGGGCAAGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYWHISS*SGQGCT
Trigger: AGTACAACCTTGCCCGGACCAGGAAGAAATATGCCA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTAGCAGGGCCTCCTCTTaGAGGTGGAACTTCAATCCC +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTSRASS*RWNFNP
Trigger: GGGATTGAAGTTCCACCTCCAAGAGGAGGCCCTGCT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACACTATCCCTTGGAAATaGGCTGAATCCGATTCCCAC +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYTIPWK*AESDSH
Trigger: GTGGGAATCGGATTCAGCCCATTTCCAAGGGATAGT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTGTGATGTCTGGAGCTaGCAAAGAGGTTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNCDVWS*QRGSCC
Trigger: ACAACAGGAACCTCTTTGTCAGCTCCAGACATCACA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTGTGATGTCTGGAGCTaGCAAAGAGGTTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSCDVWS*QRGSCC
Trigger: ACAACAGGAACCTCTTTGTCAGCTCCAGACATCACA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAGAAGACTGCTGGCTTaGGGGTCGAGCAATATTAAC +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSRRLLA*GSSNIN
Trigger: GTTAATATTGCTCGACCCTCAAGCCAGCAGTCTTCT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAACAATTTCCTTCTGCTaGGCTAGGCTTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRTISFC*ARLLWG
Trigger: GCCCCACAGAAGCCTAGCTCAGCAGAAGGAAATTGT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTACAATTTCCTTCTGCTaGGCTAGGCTTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTTISFC*ARLLWG
Trigger: GCCCCACAGAAGCCTAGCTCAGCAGAAGGAAATTGT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACATCATCAGGCTCCAGTaGGGCATGATTGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYIIRLQ*GMIEIH
Trigger: ATGGATTTCAATCATGCCTCACTGGAGCCTGATGAT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTAATACTATCCTTGGCTaGTGGCTCTGTACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSNTILG*WLCTGL
Trigger: GAGGCCTGTACAGAGCCATCAGCCAAGGATAGTATT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCAGAAACTTGATGGCTaGAACAGCCATCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSQKLDG*NSHPAT
Trigger: AGTAGCTGGATGGCTGTTTCAGCCATCAAGTTTCTG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATGGCTTCTGTCTCCCTaGGAGAGCCTTCAGATAGTA +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRWLLSP*ESLQIV
Trigger: TACTATCTGAAGGCTCTCTCAGGGAGACAGAAGCCA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGGTCACTTCATATTCTaGCTGCCATCCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSGHFIF*LPSSIC
Trigger: GCAGATTGAGGATGGCAGTCAGAATATGAAGTGACC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAGATGTCCAAGAAGACTaGTGGCTTGAGGGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRDVQED*WLEGRA
Trigger: TGCTCGACCCTCAAGCCAGCAGTCTTCTTGGACATC...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGGAACCAGACTCAGGCTaGTCAGAGAAATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMEPDSG*SEKSAG
Trigger: CCCTGCTGATTTCTCTGAGCAGCCTGAGTCTGGTTC...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACACTTCATATTCTGACTaGCATCCTCAATCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYTSYSD*HPQSAC
Trigger: GCAGGCAGATTGAGGATGGCAGTCAGAATATGAAGT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCAGCGAGATTTTTCCTaGGTCTCCAGTGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTQRDFS*VSSAAS
Trigger: TGAAGCGGCACTGGAGACCCAGGAAAAATCTCGCTG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTGTCCAAGAAGACTGCTaGCTTGAGGGTCGAGCAATA +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSVQEDC*LEGRAI
Trigger: TATTGCTCGACCCTCAAGCCAGCAGTCTTCTTGGAC...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTGTGTGTGTGGGAGGATaGGACACTTCAAGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSVCVGG*DTSRVK
Trigger: CTTTACCCTTGAAGTGTCCCATCCTCCCACACACAC...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
3UTR CAA 72 bp TTGTTCATGCTACTTAATAAGTGGTTTCTAACTTCGTaGTATATGGGGGCGACTCTTCATCTCATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LFMLLNKWFLTS*YMGATLHLMEE
Trigger: CTCCTCCATGAGATGAAGAGTCGCCCCCATATACAACGAAGTTAGAAACCACTTATTAAGTAGCATGAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATGTGATGTCTGGAGCTaGCAAAGAGGTTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRCDVWS*QRGSCC
Trigger: ACAACAGGAACCTCTTTGTCAGCTCCAGACATCACA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTCATTGGGCTCTTCTTaGGAGCTTCCTTCAGACAAA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNSLGSS*ELPSDK
Trigger: TTTGTCTGAAGGAAGCTCTCAAGAAGAGCCCAATGA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTCATTGGGCTCTTCTTaGGAGCTTCCTTCAGACAAA +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSSLGSS*ELPSDK
Trigger: TTTGTCTGAAGGAAGCTCTCAAGAAGAGCCCAATGA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTGGTCCTCTTCCTTATaGGCCCTTGCATCATTCGGA +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMWSSSL*ALASFG
Trigger: TCCGAATGATGCAAGGGCTCATAAGGAAGAGGACCA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAGGCTCCAGTGAGGCATaGTTGAAATCCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRGSSEA*LKSISS
Trigger: AGAGGAAATGGATTTCAATCATGCCTCACTGGAGCC...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGAATACTATCCTTGGCTaGTGGCTCTGTACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMNTILG*WLCTGL
Trigger: GAGGCCTGTACAGAGCCATCAGCCAAGGATAGTATT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCAAGTCACAAATATATaGCACTGTGGGCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNQVTNI*HCGLRE
Trigger: CTCCCTAAGCCCACAGTGTCATATATTTGTGACTTG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTGGCTTCTGTCTCCCTaGGAGAGCCTTCAGATAGTA +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMWLLSP*ESLQIV
Trigger: TACTATCTGAAGGCTCTCTCAGGGAGACAGAAGCCA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACCATCCCCAGTTTCCATaGAGAGGCCAATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYHPQFP*RGQFSF
Trigger: AAAAGAAAATTGGCCTCTTCATGGAAACTGGGGATG...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATCATCTCGGGTGTGGTaGGGTTACGAAAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRSSRVW*GYERNQ
Trigger: CTGATTCCTTTCGTAACCGCACCACACCCGAGATGA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297977.9
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGAGGTTCCTGTTGTTaGTGTTCCAGATTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYRGSCC*CSRFRV
Trigger: AACTCTGAATCTGGAACAGCAACAACAGGAACCTCT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACACCATGCAACACAATTaGACACTGCCAAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYTMQHN*TLPSHK
Trigger: TTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAGTCCAAGAAGACTGCTaGCTTGAGGGTCGAGCAATA +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRVQEDC*LEGRAI
Trigger: TATTGCTCGACCCTCAAGCCAGCAGTCTTCTTGGAC...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGCCTACTTGATGAACTaGCTGGACTGTATATACCAG +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSAYLMN*LDCIYQ
Trigger: CTGGTATATACAGTCCAGCCAGTTCATCAAGTAGGC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTAAACAGAGCCCAGGCTaGTCATGCCATTGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTKQSPG*SCHCPN
Trigger: ATTGGGACAATGGCATGACCAGCCTGGGCTCTGTTT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAAACAGAGCCCAGGCTaGTCATGCCATTGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRKQSPG*SCHCPN
Trigger: ATTGGGACAATGGCATGACCAGCCTGGGCTCTGTTT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTCGGAACAACTTCATTaGGCTCTTCTTGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSSEQLH*ALLESF
Trigger: GAAGCTCTCAAGAAGAGCCCAATGAAGTTGTTCCGA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTGTGTGTGTGGGAGGATaGGACACTTCAAGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTVCVGG*DTSRVK
Trigger: CTTTACCCTTGAAGTGTCCCATCCTCCCACACACAC...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCGACTCTTCATCTCATaGAGGAGTTGGTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTRLFIS*RSWCDW
Trigger: CCAGTCACACCAACTCCTCCATGAGATGAAGAGTCG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGAAGAAACTATCCCTTaGAAATGGGCTGAATCCGAT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYEETIP*KWAESD
Trigger: ATCGGATTCAGCCCATTTCCAAGGGATAGTTTCTTC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAGAAGACTGCTGGCTTaGGGGTCGAGCAATATTAAC +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRRRLLA*GSSNIN
Trigger: GTTAATATTGCTCGACCCTCAAGCCAGCAGTCTTCT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCACACAGAAGGCTTTTaGGGTACTGTCATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNHTEGF*GTVISE
Trigger: TTCTGAAATGACAGTACCTCAAAAGCCTTCTGTGTG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGGGCTCCAGTGAGGCATaGTTGAAATCCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMGSSEA*LKSISS
Trigger: AGAGGAAATGGATTTCAATCATGCCTCACTGGAGCC...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGAATGCAGTTATCTTaGAATGCACACCTGTTACGA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYRMQLS*NAHLLR
Trigger: TCGTAACAGGTGTGCATTTCAAGATAACTGCATTCT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACAAGTCACAAATATATaGCACTGTGGGCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRQVTNI*HCGLRE
Trigger: CTCCCTAAGCCCACAGTGTCATATATTTGTGACTTG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTTTAATCGTAATATCTaGGGCTCTGTTACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYFNRNI*GSVTLC
Trigger: GCAGAGAGTAACAGAGCCTCAGATATTACGATTAAA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCATCCCCAGTTTCCATaGAGAGGCCAATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNHPQFP*RGQFSF
Trigger: AAAAGAAAATTGGCCTCTTCATGGAAACTGGGGATG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGGGTCACTTCATATTCTaGCTGCCATCCTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMGHFIF*LPSSIC
Trigger: GCAGATTGAGGATGGCAGTCAGAATATGAAGTGACC...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGCATTTTTACAGTGTaGTACTTGTCTTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYSIFTV*YLSLDR
Trigger: CCTGTCCAAAGACAAGTAGCACACTGTAAAAATGCT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAATAGCTTGGTATCTGTaGTCTCATCGATGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRIAWYL*SHRCQL
Trigger: GAGCTGGCATCGATGAGAGCACAGATACCAAGCTAT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTATAGCTTGGTATCTGTaGTCTCATCGATGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTIAWYL*SHRCQL
Trigger: GAGCTGGCATCGATGAGAGCACAGATACCAAGCTAT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTCTGACAGCAGTGCCTaGTGTTGTTCCTTATCATCA +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSSDSSA*CCSLSS
Trigger: TGATGATAAGGAACAACAGCAGGCACTGCTGTCAGA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACACCATGCAACACAATTaGACACTGCCAAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNTMQHN*TLPSHK
Trigger: TTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAAGAGCATGATACAGTaGTGTCTGCCAAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYKSMIQ*CLPRKI
Trigger: TATTTTCCTTGGCAGACAGCACTGTATCATGCTCTT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAACTTCATATTCTGACTaGCATCCTCAATCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRTSYSD*HPQSAC
Trigger: GCAGGCAGATTGAGGATGGCAGTCAGAATATGAAGT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTGCCTACTTGATGAACTaGCTGGACTGTATATACCAG +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSAYLMN*LDCIYQ
Trigger: CTGGTATATACAGTCCAGCCAGTTCATCAAGTAGGC...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACCAGTCTCCATTGCAATaGACAAACAATTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYQSPLQ*TNNFLL
Trigger: CAGAAGGAAATTGTTTGTCCATTGCAATGGAGACTG...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGGGCAAGGTTGTACTTTaGTTCTCAGCTCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMGKVVL*FSARRE
Trigger: TTCCCTTCGAGCTGAGAACCAAAGTACAACCTTGCC...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATGGCATATTTCTTCCTaGTCCGGGCAAGGTTGTACT +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRWHISS*SGQGCT
Trigger: AGTACAACCTTGCCCGGACCAGGAAGAAATATGCCA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATCGGAACAACTTCATTaGGCTCTTCTTGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRSEQLH*ALLESF
Trigger: GAAGCTCTCAAGAAGAGCCCAATGAAGTTGTTCCGA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTTTTCACATTATCTGTaGTTACTGCATGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYFSHYL*LLHGGP
Trigger: AGGACCACCATGCAGTAACCACAGATAATGTGAAAA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTACCTATTTGTGTGTGTaGGAGGATGGGACACTTCAA +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSTYLCV*EDGTLQ
Trigger: TTGAAGTGTCCCATCCTCCCACACACACAAATAGGT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGTACAGGGTATAATTaGGTCTCAGCCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYSTGYN*VSAFSS
Trigger: AGAAGAAAAGGCTGAGACCCAATTATACCCTGTACT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGATGTTGCTGTCTTTaGAGAAATGGCTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYRCCCL*RNGFFD
Trigger: GTCAAAGAAGCCATTTCTCCAAAGACAGCAACATCT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGTTTGTTTTCAGCAATaGTGTGTTGACTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYVCFQQ*CVDCRF
Trigger: GAACCTACAGTCAACACACCATTGCTGAAAACAAAC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGATTGTAGCTCGGGTGTaGTGCGGTTACGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMIVARV*CGYERN
Trigger: ATTCCTTTCGTAACCGCACCACACCCGAGCTACAAT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGGCTTATATGACCTTTaGATCCCAACTGGTTCAATT +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSGLYDL*IPTGSI
Trigger: AATTGAACCAGTTGGGATTCAAAGGTCATATAAGCC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTCATTGGGCTCTTCTTaGGAGCTTCCTTCAGACAAA +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMSLGSS*ELPSDK
Trigger: TTTGTCTGAAGGAAGCTCTCAAGAAGAGCCCAATGA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGATCATCAGGCTCCAGTaGGGCATGATTGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMIIRLQ*GMIEIH
Trigger: ATGGATTTCAATCATGCCTCACTGGAGCCTGATGAT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAATCATCAGGCTCCAGTaGGGCATGATTGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRIIRLQ*GMIEIH
Trigger: ATGGATTTCAATCATGCCTCACTGGAGCCTGATGAT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACACAAAGAAGATACACTaGATGAGGTATCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNTKKIH*MRYHQA
Trigger: AGCCTGATGATACCTCATTCAGTGTATCTTCTTTGT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTATATTCCCTCCAACTaGAATCACAAACTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYYIPSN*NHKLSE
Trigger: CTCAGAAAGTTTGTGATTTCAGTTGGAGGGAATATA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACGGCCTCATATGGAAATaGGGTAAATTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNGLIWK*GKFCGK
Trigger: TTTGCCACAAAATTTACCTCATTTCCATATGAGGCC...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCAAGTCACAAATATATaGCACTGTGGGCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMQVTNI*HCGLRE
Trigger: CTCCCTAAGCCCACAGTGTCATATATTTGTGACTTG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACATCCCCAGTTTCCATaGAGAGGCCAATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRHPQFP*RGQFSF
Trigger: AAAAGAAAATTGGCCTCTTCATGGAAACTGGGGATG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGATGTGGTTTTAAGGTaGCAGTATATTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYDVVLR*QYISEV
Trigger: TACCTCTGAAATATACTGTCACCTTAAAACCACATC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAATTATCTGTGGTTACTaGATGGTGGTCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRIICGY*MVVLFL
Trigger: AAGGAAGAGGACCACCATGCAGTAACCACAGATAAT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATCTGACAGCAGTGCCTaGTGTTGTTCCTTATCATCA +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRSDSSA*CCSLSS
Trigger: TGATGATAAGGAACAACAGCAGGCACTGCTGTCAGA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTGCAGTTATCTTGAAATaGACACCTGTTACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSAVILK*TPVTKP
Trigger: TGGCTTCGTAACAGGTGTGCATTTCAAGATAACTGC...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAACCATGCAACACAATTaGACACTGCCAAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRTMQHN*TLPSHK
Trigger: TTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTTCTGGCTTAAAAACTaGTTGGCTGTTCTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYFWLKN*LAVLSL
Trigger: TAAGCTTAGAACAGCCAAGCAGTTTTTAAGCCAGAA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCATCCTCAATCTGCCTaGTTTTGTTTACCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSHPQSA*FCLPLG
Trigger: TCCTAAAGGTAAACAAAAGCAGGCAGATTGAGGATG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCAGTCTCCATTGCAATaGACAAACAATTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNQSPLQ*TNNFLL
Trigger: CAGAAGGAAATTGTTTGTCCATTGCAATGGAGACTG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAAATCTCGAATAGCTTaGTATCTGTGCTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSKSRIA*YLCSHR
Trigger: TCGATGAGAGCACAGATACCAAGCTATTCGAGATTT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAAATCTCGAATAGCTTaGTATCTGTGCTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNKSRIA*YLCSHR
Trigger: TCGATGAGAGCACAGATACCAAGCTATTCGAGATTT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTCGGAACAACTTCATTaGGCTCTTCTTGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMSEQLH*ALLESF
Trigger: GAAGCTCTCAAGAAGAGCCCAATGAAGTTGTTCCGA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTTTTCACATTATCTGTaGTTACTGCATGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSFSHYL*LLHGGP
Trigger: AGGACCACCATGCAGTAACCACAGATAATGTGAAAA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATTTGAATACTATCCTTaGCTGATGGCTCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRFEYYP*LMALYR
Trigger: CCTGTACAGAGCCATCAGCCAAGGATAGTATTCAAA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACCAGTGTGTTGCCATCTaGTACCTACTAATAATAGAA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYQCVAI*YLLIIE
Trigger: TTCTATTATTAGTAGGTACCAGATGGCAACACACTG...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCTTGGTAATACCATCTaGTACTCCAGAAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSLGNTI*YSRKEE
Trigger: TTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACATGAAAGACTATCAGTaGGAGCTTACCTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYMKDYQ*ELTYLC
Trigger: ACACAAATAGGTAAGCTCCCACTGATAGTCTTTCAT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTTGCAAAACTCCATATaGCTCAAGGAAGCATATCTG +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSLQNSI*LKEAYL
Trigger: CAGATATGCTTCCTTGAGCCATATGGAGTTTTGCAA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAGAGACTTGAAGGCCTaGAATTTGTTCATGCTACTT +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSRDLKA*NLFMLL
Trigger: AAGTAGCATGAACAAATTCCAGGCCTTCAAGTCTCT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACATCACATGCTTGCAATaGCAATACAAAAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYITCLQ*QYKNPA
Trigger: AGCAGGATTTTTGTATTGCCATTGCAAGCATGTGAT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAGTACAGGGTATAATTaGGTCTCAGCCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNSTGYN*VSAFSS
Trigger: AGAAGAAAAGGCTGAGACCCAATTATACCCTGTACT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAGATGTTGCTGTCTTTaGAGAAATGGCTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSRCCCL*RNGFFD
Trigger: GTCAAAGAAGCCATTTCTCCAAAGACAGCAACATCT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTGAAGAAACTATCCCTTaGAAATGGGCTGAATCCGAT +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSEETIP*KWAESD
Trigger: ATCGGATTCAGCCCATTTCCAAGGGATAGTTTCTTC...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACGTTTGTTTTCAGCAATaGTGTGTTGACTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNVCFQQ*CVDCRF
Trigger: GAACCTACAGTCAACACACCATTGCTGAAAACAAAC...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGTTTGTTTTCAGCAATaGTGTGTTGACTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSVCFQQ*CVDCRF
Trigger: GAACCTACAGTCAACACACCATTGCTGAAAACAAAC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCACACAGAAGGCTTTTaGGGTACTGTCATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTHTEGF*GTVISE
Trigger: TTCTGAAATGACAGTACCTCAAAAGCCTTCTGTGTG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCACAGTAAGGTTTCCTaGAATCTGGTAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSHSKVS*NLVIVL
Trigger: CAAAACAATTACCAGATTTCAGGAAACCTTACTGTG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTACAAAGAAGATACACTaGATGAGGTATCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSTKKIH*MRYHQA
Trigger: AGCCTGATGATACCTCATTCAGTGTATCTTCTTTGT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTCTCTGAATGGAATTTaGCTTGTCAGCAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSSLNGI*LVSKKN
Trigger: GTTTTTCTTGCTGACAAGTCAAATTCCATTCAGAGA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACTCTGCTGCTTTCTCTaGATGGAATTTGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRLCCFL*MEFDLS
Trigger: TGACAAGTCAAATTCCATTCAGAGAAAGCAGCAGAG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTTTAATCGTAATATCTaGGGCTCTGTTACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSFNRNI*GSVTLC
Trigger: GCAGAGAGTAACAGAGCCTCAGATATTACGATTAAA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCTAATGGCTGATGCGTaGCAAATAAAATCTATAGTG +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSLMADA*QIKSIV
Trigger: CACTATAGATTTTATTTGTCACGCATCAGCCATTAG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTTAGTGACTAATGGCTaGTGCGTGACAAATAAAATC +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSLVTNG*CVTNKI
Trigger: GATTTTATTTGTCACGCATCAGCCATTAGTCACTAA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTGATGTGGTTTTAAGGTaGCAGTATATTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSDVVLR*QYISEV
Trigger: TACCTCTGAAATATACTGTCACCTTAAAACCACATC...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGAGAGGTTCCTGTTGTTaGTGTTCCAGATTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMRGSCC*CSRFRV
Trigger: AACTCTGAATCTGGAACAGCAACAACAGGAACCTCT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTGTTTGTTTGTTCCTTaGCTACTTGATGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSCLFVP*LLDELA
Trigger: AGCCAGTTCATCAAGTAGGCAAGGAACAAACAAACA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTATCTCCAGTCTCCATTaGAATGGACAAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSISSLH*NGQTIS
Trigger: GGAAATTGTTTGTCCATTGCAATGGAGACTGGAGAT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAATCTCCAGTCTCCATTaGAATGGACAAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRISSLH*NGQTIS
Trigger: GGAAATTGTTTGTCCATTGCAATGGAGACTGGAGAT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATTCCTTATGAGCCCTTaGATCATTCGGAACAACTTC +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRFLMSP*IIRNNF
Trigger: GAAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTTCCTTATGAGCCCTTaGATCATTCGGAACAACTTC +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMFLMSP*IIRNNF
Trigger: GAAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTTTCCTTATGAGCCCTTaGATCATTCGGAACAACTTC +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTFLMSP*IIRNNF
Trigger: GAAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAA...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGATTATCTGTGGTTACTaGATGGTGGTCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMIICGY*MVVLFL
Trigger: AAGGAAGAGGACCACCATGCAGTAACCACAGATAAT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTATTATCTGTGGTTACTaGATGGTGGTCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTIICGY*MVVLFL
Trigger: AAGGAAGAGGACCACCATGCAGTAACCACAGATAAT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTGCAGTTATCTTGAAATaGACACCTGTTACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTAVILK*TPVTKP
Trigger: TGGCTTCGTAACAGGTGTGCATTTCAAGATAACTGC...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCAGTCTACAGTGTGTTaGCATCTGGTACCTACTAAT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMQSTVC*HLVPTN
Trigger: ATTAGTAGGTACCAGATGGCAACACACTGTAGACTG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTATTTCCTTCAGTTCCTaGTACAGAATAGCCACATTT +
Preference number: 4 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSISFSS*YRIATF
Trigger: AAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAAT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTTCTGGCTTAAAAACTaGTTGGCTGTTCTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNFWLKN*LAVLSL
Trigger: TAAGCTTAGAACAGCCAAGCAGTTTTTAAGCCAGAA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCCTCACAATAGATGTTaGTGTCTTTGGAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMPHNRC*CLWRNG
Trigger: GCCATTTCTCCAAAGACAGCAACATCTATTGTGAGG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTAAGAGCATGATACAGTaGTGTCTGCCAAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSKSMIQ*CLPRKI
Trigger: TATTTTCCTTGGCAGACAGCACTGTATCATGCTCTT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACTGCCATCCTCAATCTaGCTGCTTTTGTTTACCTTT +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRLPSSI*LLLFTF
Trigger: AAAGGTAAACAAAAGCAGGCAGATTGAGGATGGCAG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCTGCCATCCTCAATCTaGCTGCTTTTGTTTACCTTT +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTLPSSI*LLLFTF
Trigger: AAAGGTAAACAAAAGCAGGCAGATTGAGGATGGCAG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTCTTTCTTCTCTTATTaGCAACCCACGTCCATATAT +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNSFFSY*QPTSIY
Trigger: ATATATGGACGTGGGTTGGCAATAAGAGAAGAAAGA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAAAATCTCGAATAGCTTaGTATCTGTGCTCTCATCGA +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRKSRIA*YLCSHR
Trigger: TCGATGAGAGCACAGATACCAAGCTATTCGAGATTT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTTTTGAATACTATCCTTaGCTGATGGCTCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTFEYYP*LMALYR
Trigger: CCTGTACAGAGCCATCAGCCAAGGATAGTATTCAAA...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATTTGAATACTATCCTTaGCTGATGGCTCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRFEYYP*LMALYR
Trigger: CCTGTACAGAGCCATCAGCCAAGGATAGTATTCAAA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACTTGGTAATACCATCTaGTACTCCAGAAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRLGNTI*YSRKEE
Trigger: TTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATTGCAAAACTCCATATaGCTCAAGGAAGCATATCTG +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRLQNSI*LKEAYL
Trigger: CAGATATGCTTCCTTGAGCCATATGGAGTTTTGCAA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTCATCTTTTGAGGTCTTaGTCGAATAAAGAGTACAGG +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSHLLRS*SNKEYR
Trigger: CCTGTACTCTTTATTCGACCAAGACCTCAAAAGATG...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGTAGTACTAGTAAAATaGGATGCAGGATTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYVVLVK*DAGLLK
Trigger: TTTTAGCAATCCTGCATCCCATTTTACTAGTACTAC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATTTTCTTTGCGTGATTaGATACTGAGTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRFSLRD*ILSFQH
Trigger: ATGCTGGAAACTCAGTATTCAATCACGCAAAGAAAA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTTTTCTTTGCGTGATTaGATACTGAGTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSFSLRD*ILSFQH
Trigger: ATGCTGGAAACTCAGTATTCAATCACGCAAAGAAAA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTGGCTTATATGACCTTTaGATCCCAACTGGTTCAATT +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTGLYDL*IPTGSI
Trigger: AATTGAACCAGTTGGGATTCAAAGGTCATATAAGCC...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGGGCTTATATGACCTTTaGATCCCAACTGGTTCAATT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMGLYDL*IPTGSI
Trigger: AATTGAACCAGTTGGGATTCAAAGGTCATATAAGCC...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACACAGTAAGGTTTCCTaGAATCTGGTAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRHSKVS*NLVIVL
Trigger: CAAAACAATTACCAGATTTCAGGAAACCTTACTGTG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGAGAATGCAGTTATCTTaGAATGCACACCTGTTACGA +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMRMQLS*NAHLLR
Trigger: TCGTAACAGGTGTGCATTTCAAGATAACTGCATTCT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTGGCCTCATATGGAAATaGGGTAAATTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTGLIWK*GKFCGK
Trigger: TTTGCCACAAAATTTACCTCATTTCCATATGAGGCC...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATCAAGGAAGCATATCTaGACACTGAAATATTCCTAC +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRSRKHI*TLKYSY
Trigger: GTAGGAATATTTCAGTGTTCAGATATGCTTCCTTGA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTCTCTGAATGGAATTTaGCTTGTCAGCAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSSLNGI*LVSKKN
Trigger: GTTTTTCTTGCTGACAAGTCAAATTCCATTCAGAGA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTTTTAATCGTAATATCTaGGGCTCTGTTACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTFNRNI*GSVTLC
Trigger: GCAGAGAGTAACAGAGCCTCAGATATTACGATTAAA...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACTAATGGCTGATGCGTaGCAAATAAAATCTATAGTG +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRLMADA*QIKSIV
Trigger: CACTATAGATTTTATTTGTCACGCATCAGCCATTAG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTTAGTGACTAATGGCTaGTGCGTGACAAATAAAATC +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSLVTNG*CVTNKI
Trigger: GATTTTATTTGTCACGCATCAGCCATTAGTCACTAA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAGCATTTTTACAGTGTaGTACTTGTCTTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRSIFTV*YLSLDR
Trigger: CCTGTCCAAAGACAAGTAGCACACTGTAAAAATGCT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTAGCATTTTTACAGTGTaGTACTTGTCTTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTSIFTV*YLSLDR
Trigger: CCTGTCCAAAGACAAGTAGCACACTGTAAAAATGCT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTATCTCCAGTCTCCATTaGAATGGACAAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTISSLH*NGQTIS
Trigger: GGAAATTGTTTGTCCATTGCAATGGAGACTGGAGAT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAATTTCCTTCAGTTCCTaGTACAGAATAGCCACATTT +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRISFSS*YRIATF
Trigger: AAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAAT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAAGAGCATGATACAGTaGTGTCTGCCAAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRKSMIQ*CLPRKI
Trigger: TATTTTCCTTGGCAGACAGCACTGTATCATGCTCTT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCATCCTCAATCTGCCTaGTTTTGTTTACCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTHPQSA*FCLPLG
Trigger: TCCTAAAGGTAAACAAAAGCAGGCAGATTGAGGATG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCAGTCTCCATTGCAATaGACAAACAATTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTQSPLQ*TNNFLL
Trigger: CAGAAGGAAATTGTTTGTCCATTGCAATGGAGACTG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTACTCCGTAATGGATTaGTATTACTGTACATTGTAC +
Preference number: 4 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNYSVMD*YYCTLY
Trigger: GTACAATGTACAGTAATACCAATCCATTACGGAGTA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTTTTCACATTATCTGTaGTTACTGCATGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMFSHYL*LLHGGP
Trigger: AGGACCACCATGCAGTAACCACAGATAATGTGAAAA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACAGTGTGTTGCCATCTaGTACCTACTAATAATAGAA +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRQCVAI*YLLIIE
Trigger: TTCTATTATTAGTAGGTACCAGATGGCAACACACTG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTCAGTGTGTTGCCATCTaGTACCTACTAATAATAGAA +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSQCVAI*YLLIIE
Trigger: TTCTATTATTAGTAGGTACCAGATGGCAACACACTG...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCTTGGTAATACCATCTaGTACTCCAGAAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMLGNTI*YSRKEE
Trigger: TTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAATGAAAGACTATCAGTaGGAGCTTACCTATTTGTGT +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRMKDYQ*ELTYLC
Trigger: ACACAAATAGGTAAGCTCCCACTGATAGTCTTTCAT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTAGAGACTTGAAGGCCTaGAATTTGTTCATGCTACTT +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTRDLKA*NLFMLL
Trigger: AAGTAGCATGAACAAATTCCAGGCCTTCAAGTCTCT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAGTACAGGGTATAATTaGGTCTCAGCCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRSTGYN*VSAFSS
Trigger: AGAAGAAAAGGCTGAGACCCAATTATACCCTGTACT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAGATGTTGCTGTCTTTaGAGAAATGGCTTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRRCCCL*RNGFFD
Trigger: GTCAAAGAAGCCATTTCTCCAAAGACAGCAACATCT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTGTGCACACTGTAATATaGGCTGAAAGCAATTTTTAC +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTVHTVI*AESNFY
Trigger: GTAAAAATTGCTTTCAGCTCATATTACAGTGTGCAC...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297977.9
ENST00000373177.3
CDS-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAGTGCACACTGTAATATaGGCTGAAAGCAATTTTTAC +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRVHTVI*AESNFY
Trigger: GTAAAAATTGCTTTCAGCTCATATTACAGTGTGCAC...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297977.9
ENST00000373177.3
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTTTTCTTTGCGTGATTaGATACTGAGTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMFSLRD*ILSFQH
Trigger: ATGCTGGAAACTCAGTATTCAATCACGCAAAGAAAA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACACAGTAAGGTTTCCTaGAATCTGGTAATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRHSKVS*NLVIVL
Trigger: CAAAACAATTACCAGATTTCAGGAAACCTTACTGTG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATATATTCCCTCCAACTaGAATCACAAACTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRYIPSN*NHKLSE
Trigger: CTCAGAAAGTTTGTGATTTCAGTTGGAGGGAATATA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTCTCTGAATGGAATTTaGCTTGTCAGCAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMSLNGI*LVSKKN
Trigger: GTTTTTCTTGCTGACAAGTCAAATTCCATTCAGAGA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR TCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTGATGTGGTTTTAAGGTaGCAGTATATTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTDVVLR*QYISEV
Trigger: TACCTCTGAAATATACTGTCACCTTAAAACCACATC...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTCACCTACATTTTTGTTaGACTGTAGCCATTATATCT +
Preference number: 4 (lower is better)
Translates to: RGISFSSCYRIATFHFRSHLHFC*TVAIIS
Trigger: AGATATAATGGCTACAGTGCAACAAAAATGTAGGTG...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGACACCTACATTTTTGTTaGACTGTAGCCATTATATCT +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRHLHFC*TVAIIS
Trigger: AGATATAATGGCTACAGTGCAACAAAAATGTAGGTG...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR GCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTTTCTGGCTTAAAAACTaGTTGGCTGTTCTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTFWLKN*LAVLSL
Trigger: TAAGCTTAGAACAGCCAAGCAGTTTTTAAGCCAGAA...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTATCACATGCTTGCAATaGCAATACAAAAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTITCLQ*QYKNPA
Trigger: AGCAGGATTTTTGTATTGCCATTGCAAGCATGTGAT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAGTAGTACTAGTAAAATaGGATGCAGGATTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRVVLVK*DAGLLK
Trigger: TTTTAGCAATCCTGCATCCCATTTTACTAGTACTAC...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTTACATACACATTTCTaGCTTAAAAACTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMLHTHF*LKNCLA
Trigger: AGCCAAGCAGTTTTTAAGCCAGAAATGTGTATGTAA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTTTACATACACATTTCTaGCTTAAAAACTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTLHTHF*LKNCLA
Trigger: AGCCAAGCAGTTTTTAAGCCAGAAATGTGTATGTAA...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CCA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAGTAGTACTAGTAAAATaGGATGCAGGATTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRVVLVK*DAGLLK
Trigger: TTTTAGCAATCCTGCATCCCATTTTACTAGTACTAC...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS CCA 90 bp GTGCGGTTACGAAAGGAATCAGCGGAACCCAGATCAGGCCGCTGCTaGGGCAGGCGGATTCAGCGAGATTTTTCCTGGGTCTCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VRLRKESAEPRSGRC*GRRIQRDFSWVSSA
Trigger: GGCACTGGAGACCCAGGAAAAATCTCGCTGAATCCGCCTGCCCCAGCAGCGGCCTGATCTGGGTTCCGCTGATTCCTTTCGTAACCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000465509.3
ENST00000506585.6
CDS GCA 90 bp GTGGTGCGGTTACGAAAGGAATCAGCGGAACCCAGATCAGGCCGCTaGTGGGGCAGGCGGATTCAGCGAGATTTTTCCTGGGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: VVRLRKESAEPRSGR*WGRRIQRDFSWVSS
Trigger: ACTGGAGACCCAGGAAAAATCTCGCTGAATCCGCCTGCCCCAGCAGCGGCCTGATCTGGGTTCCGCTGATTCCTTTCGTAACCGCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000465509.3
ENST00000506585.6
CDS CCA 90 bp AGATCAGGCCGCTGCTGGGGCAGGCGGATTCAGCGAGATTTTTCCTaGGTCTCCAGTGCCGCTTCAGACAATGAAATCAGCGTGTCCGAT +
Preference number: 5 (lower is better)
Translates to: RSGRCWGRRIQRDFS*VSSAASDNEISVSD
Trigger: ATCGGACACGCTGATTTCATTGTCTGAAGCGGCACTGGAGACCCAGGAAAAATCTCGCTGAATCCGCCTGCCCCAGCAGCGGCCTGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449553.2
CDS TCA 90 bp AGCATCTCCAGTCTCCATTGCAATGGACAAACAATTTCCTTCTGCTaGGCTAGGCTTCTGTGGGGCATTTCCTCCCAGAATTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SISSLHCNGQTISFC*ARLLWGISSQNSLG
Trigger: CCCCAGAGAATTCTGGGAGGAAATGCCCCACAGAAGCCTAGCTCAGCAGAAGGAAATTGTTTGTCCATTGCAATGGAGACTGGAGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CCA 90 bp AATAGCTTGGTATCTGTGCTCTCATCGATGCCAGCTCTTCCTCTCTaGCATATTCATCCTCAGCATCTCCAGTCTCCATTGCAATGGACA +
Preference number: 5 (lower is better)
Translates to: NSLVSVLSSMPALPL*HIHPQHLQSPLQWT
Trigger: TGTCCATTGCAATGGAGACTGGAGATGCTGAGGATGAATATGCCAGAGAGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CCA 90 bp CTCAGCTCGAAGGGAACTGCCACTTTCATAAAATCTCGAATAGCTTaGTATCTGTGCTCTCATCGATGCCAGCTCTTCCTCTCTGGCATA +
Preference number: 5 (lower is better)
Translates to: LSSKGTATFIKSRIA*YLCSHRCQLFLSGI
Trigger: TATGCCAGAGAGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATTCGAGATTTTATGAAAGTGGCAGTTCCCTTCGAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS GCA 90 bp ATTATCTGTGGTTACTGCATGGTGGTCCTCTTCCTTATGAGCCCTTaGATCATTCGGAACAACTTCATTGGGCTCTTCTTGAGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: IICGYCMVVLFLMSP*IIRNNFIGLFLRAS
Trigger: GGAAGCTCTCAAGAAGAGCCCAATGAAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAAGAGGACCACCATGCAGTAACCACAGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS GCA 90 bp AAGGGAACTGCCACTTTCATAAAATCTCGAATAGCTTGGTATCTGTaGTCTCATCGATGCCAGCTCTTCCTCTCTGGCATATTCATCCTC +
Preference number: 5 (lower is better)
Translates to: KGTATFIKSRIAWYL*SHRCQLFLSGIFIL
Trigger: GAGGATGAATATGCCAGAGAGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATTCGAGATTTTATGAAAGTGGCAGTTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGGGCAAGGTTGTACTTaGGTTCTCAGCTCGAAGGGA +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYGQGCT*VLSSKG
Trigger: TCCCTTCGAGCTGAGAACCAAAGTACAACCTTGCCC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACCTGGTCCGGGCAAGGTaGTACTTTGGTTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNLVRAR*YFGSQL
Trigger: GAGCTGAGAACCAAAGTACAACCTTGCCCGGACCAG...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 90 bp GGGTCGAGCAATATTAACCACATTTCTGACTGTGATGTCTGGAGCTaGCAAAGAGGTTCCTGTTGTTGCTGTTCCAGATTCAGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: GSSNINHISDCDVWS*QRGSCCCCSRFRVL
Trigger: AAGAACTCTGAATCTGGAACAGCAACAACAGGAACCTCTTTGTCAGCTCCAGACATCACAGTCAGAAATGTGGTTAATATTGCTCGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS TCA 90 bp CTTGCCTACTTGATGAACTGGCTGGACTGTATATACCAGTTACAATaGCATCATTATTGGCAGATGTCCAAGAAGACTGCTGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LAYLMNWLDCIYQLQ*HHYWQMSKKTAGLR
Trigger: CCTCAAGCCAGCAGTCTTCTTGGACATCTGCCAATAATGATGTCATTGTAACTGGTATATACAGTCCAGCCAGTTCATCAAGTAGGCAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS TCA 90 bp GGCATTTCCTCCCAGAATTCTCTGGGGGTAATCGCTAACTGCCAATaGAAACACTTCACGGATTTCCAAGTTTTGTGTTCTACAGTAAGG +
Preference number: 5 (lower is better)
Translates to: GISSQNSLGVIANCQ*KHFTDFQVLCSTVR
Trigger: CCTTACTGTAGAACACAAAACTTGGAAATCCGTGAAGTGTTTTCATTGGCAGTTAGCGATTACCCCCAGAGAATTCTGGGAGGAAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS GCA 90 bp ACTTTCATAAAATCTCGAATAGCTTGGTATCTGTGCTCTCATCGATaGCAGCTCTTCCTCTCTGGCATATTCATCCTCAGCATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: TFIKSRIAWYLCSHR*QLFLSGIFILSISS
Trigger: ACTGGAGATGCTGAGGATGAATATGCCAGAGAGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATTCGAGATTTTATGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACGACCCTAGGAGAGACTaGAAGGCCTGGAATTTGTTC +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYDPRRD*KAWNLF
Trigger: GAACAAATTCCAGGCCTTCAAGTCTCTCCTAGGGTC...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 90 bp TACAATGACATCATTATTGGCAGATGTCCAAGAAGACTGCTGGCTTaGGGGTCGAGCAATATTAACCACATTTCTGACTGTGATGTCTGG +
Preference number: 5 (lower is better)
Translates to: YNDIIIGRCPRRLLA*GSSNINHISDCDVW
Trigger: CCAGACATCACAGTCAGAAATGTGGTTAATATTGCTCGACCCTCAAGCCAGCAGTCTTCTTGGACATCTGCCAATAATGATGTCATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS TCA 90 bp AAGTTATGTAATGCTGGGCCTGTGTGTTCAGGCTTATATGACCTTTaGATCCCAACTGGTTCAATTTTACAAGGTCGGTGGCACACAGAA +
Preference number: 5 (lower is better)
Translates to: KLCNAGPVCSGLYDL*IPTGSILQGRWHTE
Trigger: TTCTGTGTGCCACCGACCTTGTAAAATTGAACCAGTTGGGATTCAAAGGTCATATAAGCCTGAACACACAGGCCCAGCATTACATAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACTGGTCCGGGCAAGGTaGTACTTTGGTTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRLVRAR*YFGSQL
Trigger: GAGCTGAGAACCAAAGTACAACCTTGCCCGGACCAG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTCTGGTCCGGGCAAGGTaGTACTTTGGTTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTLVRAR*YFGSQL
Trigger: GAGCTGAGAACCAAAGTACAACCTTGCCCGGACCAG...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACGACCCTAGGAGAGACTaGAAGGCCTGGAATTTGTTC +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNDPRRD*KAWNLF
Trigger: GAACAAATTCCAGGCCTTCAAGTCTCTCCTAGGGTC...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 90 bp TTCTCTTATTGCCAACCCACGTCCATATATGGTCACTTCATATTCTaGCTGCCATCCTCAATCTGCCTGCTTTTGTTTACCTTTAGGAGT +
Preference number: 5 (lower is better)
Translates to: FSYCQPTSIYGHFIF*LPSSICLLLFTFRS
Trigger: ACTCCTAAAGGTAAACAAAAGCAGGCAGATTGAGGATGGCAGTCAGAATATGAAGTGACCATATATGGACGTGGGTTGGCAATAAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506585.6
CDS GCA 90 bp ATACCAGTTACAATGACATCATTATTGGCAGATGTCCAAGAAGACTaGTGGCTTGAGGGTCGAGCAATATTAACCACATTTCTGACTGTG +
Preference number: 5 (lower is better)
Translates to: IPVTMTSLLADVQED*WLEGRAILTTFLTV
Trigger: CACAGTCAGAAATGTGGTTAATATTGCTCGACCCTCAAGCCAGCAGTCTTCTTGGACATCTGCCAATAATGATGTCATTGTAACTGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACATCTTTCTTCTCTTATaGCCAACCCACGTCCTGACT +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYIFLLL*PTHVLT
Trigger: AGTCAGGACGTGGGTTGGCAATAAGAGAAGAAAGAT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297977.9
ENST00000373177.3
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAAGAGGTTCCTGTTGTaGCTGTTCCAGATTCAGAGT +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYKRFLL*LFQIQS
Trigger: ACTCTGAATCTGGAACAGCAACAACAGGAACCTCTT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTTGTTCCTTGCCTACTaGATGAACTGGCTGGACTGT +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNLFLAY*MNWLDC
Trigger: ACAGTCCAGCCAGTTCATCAAGTAGGCAAGGAACAA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAGGGCAAGGTTGTACTTaGGTTCTCAGCTCGAAGGGA +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRGQGCT*VLSSKG
Trigger: TCCCTTCGAGCTGAGAACCAAAGTACAACCTTGCCC...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTGGGCAAGGTTGTACTTaGGTTCTCAGCTCGAAGGGA +
Preference number: 5 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTGQGCT*VLSSKG
Trigger: TCCCTTCGAGCTGAGAACCAAAGTACAACCTTGCCC...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAGGCTGGTCATGCCATaGTCCCAATACTTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSRLVMP*SQYFLR
Trigger: CCTTAAGAAGTATTGGGACAATGGCATGACCAGCCT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAGGCTGGTCATGCCATaGTCCCAATACTTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNRLVMP*SQYFLR
Trigger: CCTTAAGAAGTATTGGGACAATGGCATGACCAGCCT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTTCATTGGGCTCTTCTaGAGAGCTTCCTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYFIGLF*RASFRQ
Trigger: TTGTCTGAAGGAAGCTCTCAAGAAGAGCCCAATGAA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACAGAAAACTGGGTAGCTaGCCCATTTTAGGTGTGTAC +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYRKLGS*PILGVY
Trigger: GTACACACCTAAAATGGGCAAGCTACCCAGTTTTCT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTGGTTTCTAACTTCGTaGTATATGGGGGCGACTCTT +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYWFLTS*YMGATL
Trigger: AAGAGTCGCCCCCATATACAACGAAGTTAGAAACCA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS CCA 90 bp TTACTACTCATCTTTCTTCTCTTATTGCCAACCCACGTCCATATATaGTCACTTCATATTCTGACTGCCATCCTCAATCTGCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LLLIFLLLLPTHVHI*SLHILTAILNLPAF
Trigger: AAAAGCAGGCAGATTGAGGATGGCAGTCAGAATATGAAGTGACCATATATGGACGTGGGTTGGCAATAAGAGAAGAAAGATGAGTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATTGTTCCTTGCCTACTaGATGAACTGGCTGGACTGT +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRLFLAY*MNWLDC
Trigger: ACAGTCCAGCCAGTTCATCAAGTAGGCAAGGAACAA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTTTACAGTGTGCTACTaGTCTTTGGACAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYFTVCY*SLDRNV
Trigger: CACATTCCTGTCCAAAGACAAGTAGCACACTGTAAA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACACGGATTTCCAAGTTTaGTGTTCTACAGTAAGGGTC +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYTDFQV*CSTVRV
Trigger: GACCCTTACTGTAGAACACAAAACTTGGAAATCCGT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAAGGCTGGTCATGCCATaGTCCCAATACTTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRRLVMP*SQYFLR
Trigger: CCTTAAGAAGTATTGGGACAATGGCATGACCAGCCT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCTTCCTTATGAGCCCTaGCATCATTCGGAACAACTT +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSLPYEP*HHSEQL
Trigger: AAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAAG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTCAGCAGTGCCTGCTGTaGTTCCTTATCATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSQQCLL*FLIISF
Trigger: AAAGCTGATGATAAGGAACAACAGCAGGCACTGCTG...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAACCATGCAACACAATaGCACACTGCCAAGTCACAA +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSNHATQ*HTAKSQ
Trigger: TTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACATTGGAAACAGAAACTaGATGGCTGAAACAGCCATC +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYIGNRN*MAETAI
Trigger: GATGGCTGTTTCAGCCATCAAGTTTCTGTTTCCAAT...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGGACCCTAGGAGAGACTaGAAGGCCTGGAATTTGTTC +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMDPRRD*KAWNLF
Trigger: GAACAAATTCCAGGCCTTCAAGTCTCTCCTAGGGTC...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAATCTTTCTTCTCTTATaGCCAACCCACGTCCTGACT +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRIFLLL*PTHVLT
Trigger: AGTCAGGACGTGGGTTGGCAATAAGAGAAGAAAGAT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297977.9
ENST00000373177.3
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTAAGAGGTTCCTGTTGTaGCTGTTCCAGATTCAGAGT +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSKRFLL*LFQIQS
Trigger: ACTCTGAATCTGGAACAGCAACAACAGGAACCTCTT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAACAAAGAGGTTCCTGTaGTTGCTGTTCCAGATTCAG +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRTKRFL*LLFQIQ
Trigger: CTGAATCTGGAACAGCAACAACAGGAACCTCTTTGT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTGCACACAGAAGGCTTTaGAGGTACTGTCATTTCAGA +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSAHRRL*RYCHFR
Trigger: TCTGAAATGACAGTACCTCAAAAGCCTTCTGTGTGC...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAAAATCTCGAATAGCTaGGTATCTGTGCTCTCATCG +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSKISNS*VSVLSS
Trigger: CGATGAGAGCACAGATACCAAGCTATTCGAGATTTT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATTCATTGGGCTCTTCTaGAGAGCTTCCTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRFIGLF*RASFRQ
Trigger: TTGTCTGAAGGAAGCTCTCAAGAAGAGCCCAATGAA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACAGCAGTGCCTGCTGTaGTTCCTTATCATCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRQQCLL*FLIISF
Trigger: AAAGCTGATGATAAGGAACAACAGCAGGCACTGCTG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTCAGAATGCAGTTATCTaGAAATGCACACCTGTTACG +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSQNAVI*KCTPVT
Trigger: CGTAACAGGTGTGCATTTCAAGATAACTGCATTCTG...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp TTTCTTCTATGGGTCTTGGTAATACCATCTGGTACTCCAGAAAGGAAGAACTACTCAAGCTGTAGCAACTaGATAAGCAATGCTGAAATG +
Preference number: 5 (lower is better)
Translates to: FLLWVLVIPSGTPERKNYSSCSN*ISNAEM
Trigger: CATTTCAGCATTGCTTATCAAGTTGCTACAGCTTGA...GTAGTTCTTCCTTTCTGGAGTACCAGATGGTATTACCAAGACCCATAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTATTGGAAACAGAAACTaGATGGCTGAAACAGCCATC +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSIGNRN*MAETAI
Trigger: GATGGCTGTTTCAGCCATCAAGTTTCTGTTTCCAAT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATGGTTTCTAACTTCGTaGTATATGGGGGCGACTCTT +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRWFLTS*YMGATL
Trigger: AAGAGTCGCCCCCATATACAACGAAGTTAGAAACCA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACGGAGAAATGGCTTCTTaGACATCTTTTGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNGEMAS*TSFEVL
Trigger: CAAGACCTCAAAAGATGTCAAAGAAGCCATTTCTCC...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTTCAGCAATGGTGTGTaGACTGTAGGTTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNFSNGV*TVGSQV
Trigger: AACTTGTGAACCTACAGTCAACACACCATTGCTGAA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 90 bp CAGAAGCTTGTACTGAAGAGTTTCCATAGTTTTTCTTTGCGTGATTaGATACTGAGTTTCCAGCATTTAGCACACTTGTCTGTCTTGACA +
Preference number: 5 (lower is better)
Translates to: QKLVLKSFHSFSLRD*ILSFQHLAHLSVLT
Trigger: TGTCAAGACAGACAAGTGTGCTAAATGCTGGAAACTCAGTATTCAATCACGCAAAGAAAAACTATGGAAACTCTTCAGTACAAGCTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAAGAGGTTCCTGTTGTaGCTGTTCCAGATTCAGAGT +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRKRFLL*LFQIQS
Trigger: ACTCTGAATCTGGAACAGCAACAACAGGAACCTCTT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTACAAAGAGGTTCCTGTaGTTGCTGTTCCAGATTCAG +
Preference number: 5 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTTKRFL*LLFQIQ
Trigger: CTGAATCTGGAACAGCAACAACAGGAACCTCTTTGT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGACAAAGAGGTTCCTGTaGTTGCTGTTCCAGATTCAG +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMTKRFL*LLFQIQ
Trigger: CTGAATCTGGAACAGCAACAACAGGAACCTCTTTGT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACACAATGACATCATTATaGGCAGATGTCCAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNTMTSL*ADVQED
Trigger: GTCTTCTTGGACATCTGCCAATAATGATGTCATTGT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATTTACAGTGTGCTACTaGTCTTTGGACAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRFTVCY*SLDRNV
Trigger: CACATTCCTGTCCAAAGACAAGTAGCACACTGTAAA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAACGGATTTCCAAGTTTaGTGTTCTACAGTAAGGGTC +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRTDFQV*CSTVRV
Trigger: GACCCTTACTGTAGAACACAAAACTTGGAAATCCGT...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTTTCATTGGGCTCTTCTaGAGAGCTTCCTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTFIGLF*RASFRQ
Trigger: TTGTCTGAAGGAAGCTCTCAAGAAGAGCCCAATGAA...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCTTCCTTATGAGCCCTaGCATCATTCGGAACAACTT +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMLPYEP*HHSEQL
Trigger: AAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAAG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGACTTCCTTATGAGCCCTaGCATCATTCGGAACAACTT +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRLPYEP*HHSEQL
Trigger: AAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAAG...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTCAGAATGCAGTTATCTaGAAATGCACACCTGTTACG +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSQNAVI*KCTPVT
Trigger: CGTAACAGGTGTGCATTTCAAGATAACTGCATTCTG...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATCTCAGCAGCTTACCTaGACTTCCTGTTTCATAACA +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRSQQLT*TSCFIT
Trigger: TGTTATGAAACAGGAAGTCAAGGTAAGCTGCTGAGA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTATTGGAAACAGAAACTaGATGGCTGAAACAGCCATC +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSIGNRN*MAETAI
Trigger: GATGGCTGTTTCAGCCATCAAGTTTCTGTTTCCAAT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTGGTTTCTAACTTCGTaGTATATGGGGGCGACTCTT +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMWFLTS*YMGATL
Trigger: AAGAGTCGCCCCCATATACAACGAAGTTAGAAACCA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACTGGCTTAAAAACTGCTaGGCTGTTCTAAGCTTAAAG +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNWLKNC*AVLSLK
Trigger: CTTTAAGCTTAGAACAGCCAAGCAGTTTTTAAGCCA...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGAGGAGAAATGGCTTCTTaGACATCTTTTGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRGEMAS*TSFEVL
Trigger: CAAGACCTCAAAAGATGTCAAAGAAGCCATTTCTCC...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AAGAGTACAGGGTATAATTGGGTCTCAGCCTTTTCTTCTCCAACAATAACAAACAAGTTAGTAGCCTCCTaGATTATAGCATTACAGAGC +
Preference number: 5 (lower is better)
Translates to: KSTGYNWVSAFSSPTITNKLVAS*IIALQS
Trigger: GCTCTGTAATGCTATAATCAAGGAGGCTACTAACTT...GTTTGTTATTGTTGGAGAAGAAAAGGCTGAGACCCAATTATACCCTGTACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTAAGTTAGTAGCCTCCTaGATTATAGCATTACAGAGC +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSKLVAS*IIALQS
Trigger: GCTCTGTAATGCTATAATCAAGGAGGCTACTAACTT...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTCAATCTGCCTGCTTTaGTTTACCTTTAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSSICLL*FTFRSS
Trigger: AGAACTCCTAAAGGTAAACAAAAGCAGGCAGATTGA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS CCA 90 bp CTTTGTTGTTCTACAGTAAATACAGAACGTAGATTCATCCATATATaGTCACTTCATATTCTGACTGCCATCCTCAATCTGCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LCCSTVNTERRFIHI*SLHILTAILNLPAF
Trigger: AAAAGCAGGCAGATTGAGGATGGCAGTCAGAATATGAAGTGACCATATATGGATGAATCTACGTTCTGTATTTACTGTAGAACAACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373177.3
CDS-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTACGGATTTCCAAGTTTaGTGTTCTACAGTAAGGGTC +
Preference number: 5 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTTDFQV*CSTVRV
Trigger: GACCCTTACTGTAGAACACAAAACTTGGAAATCCGT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGAAAATCTCGAATAGCTaGGTATCTGTGCTCTCATCG +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMKISNS*VSVLSS
Trigger: CGATGAGAGCACAGATACCAAGCTATTCGAGATTTT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAAAAATCTCGAATAGCTaGGTATCTGTGCTCTCATCG +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRKISNS*VSVLSS
Trigger: CGATGAGAGCACAGATACCAAGCTATTCGAGATTTT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGCAGAATGCAGTTATCTaGAAATGCACACCTGTTACG +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMQNAVI*KCTPVT
Trigger: CGTAACAGGTGTGCATTTCAAGATAACTGCATTCTG...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGTAGACAATATTTCTGGAATAACACAACTGTAATACGGAAGAAGGGCAGGAGTTCACCTACATTTTTGTaGCACTGTAGCCATTATATC +
Preference number: 5 (lower is better)
Translates to: SRQYFWNNTTVIRKKGRSSPTFL*HCSHYI
Trigger: GATATAATGGCTACAGTGCAACAAAAATGTAGGTGA...ACTCCTGCCCTTCTTCCGTATTACAGTTGTGTTATTCCAGAAATATTGTCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AACTACAAAGAACAGTCTACAGTGTGTTGCCATCTGGTACCTACTAATAATAGATCAAGCTGTAGCAACTaGATAAGCAATGCTGAAATG +
Preference number: 5 (lower is better)
Translates to: NYKEQSTVCCHLVPTNNRSSCSN*ISNAEM
Trigger: CATTTCAGCATTGCTTATCAAGTTGCTACAGCTTGA...TCTATTATTAGTAGGTACCAGATGGCAACACACTGTAGACTGTTCTTTGTAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTGTGATGTTTACAGCTaGCTGAGAAATCCAATGTCC +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMCDVYS*LRNPMS
Trigger: GGACATTGGATTTCTCAGCAAGCTGTAAACATCACA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTGGCTTAAAAACTGCTaGGCTGTTCTAAGCTTAAAG +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSWLKNC*AVLSLK
Trigger: CTTTAAGCTTAGAACAGCCAAGCAGTTTTTAAGCCA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTAAGTTAGTAGCCTCCTaGATTATAGCATTACAGAGC +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSKLVAS*IIALQS
Trigger: GCTCTGTAATGCTATAATCAAGGAGGCTACTAACTT...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATTCAGCAATGGTGTGTaGACTGTAGGTTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRFSNGV*TVGSQV
Trigger: AACTTGTGAACCTACAGTCAACACACCATTGCTGAA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGTTCAGCAATGGTGTGTaGACTGTAGGTTCACAAGTT +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMFSNGV*TVGSQV
Trigger: AACTTGTGAACCTACAGTCAACACACCATTGCTGAA...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 90 bp CACCTGTTACGAAGCCAAAAGACTGTATCATATATTCCCTCCAACTaGAATCACAAACTTTCTGAGACATTTTTCTCTGACAAAGAAGAT +
Preference number: 5 (lower is better)
Translates to: HLLRSQKTVSYIPSN*NHKLSETFFSDKED
Trigger: ATCTTCTTTGTCAGAGAAAAATGTCTCAGAAAGTTTGTGATTTCAGTTGGAGGGAATATATGATACAGTCTTTTGGCTTCGTAACAGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTACAATGACATCATTATaGGCAGATGTCCAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTTMTSL*ADVQED
Trigger: GTCTTCTTGGACATCTGCCAATAATGATGTCATTGT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAACAATGACATCATTATaGGCAGATGTCCAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRTMTSL*ADVQED
Trigger: GTCTTCTTGGACATCTGCCAATAATGATGTCATTGT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTTCACCTACATTTTTGTaGCACTGTAGCCATTATATC +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSSPTFL*HCSHYI
Trigger: GATATAATGGCTACAGTGCAACAAAAATGTAGGTGA...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGACAAAAATCCTGCTGTaGATAACTGACCTTAGGACA +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMTKILL*ITDLRT
Trigger: TGTCCTAAGGTCAGTTATCAACAGCAGGATTTTTGT...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGAACAAAAATCCTGCTGTaGATAACTGACCTTAGGACA +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRTKILL*ITDLRT
Trigger: TGTCCTAAGGTCAGTTATCAACAGCAGGATTTTTGT...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp AGAGGTATTTCCTTCAGTTCCTGCTACAGAATAGCCACATTTCATTTTAGAAGTGTTTCTCTTAAAATTTaGTCCAGAGATTGTAGCTCG +
Preference number: 5 (lower is better)
Translates to: RGISFSSCYRIATFHFRSVSLKI*SRDCSS
Trigger: CGAGCTACAATCTCTGGACAAAATTTTAAGAGAAAC...ACTTCTAAAATGAAATGTGGCTATTCTGTAGCAGGAACTGAAGGAAATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp GGTACTGATAACTCCCTTAAAAAGCTAACCTATCACATGTTTGCATGTTTAAGATCAATCTGCCTGCTTTaGTTTACCTTTAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: GTDNSLKKLTYHMFACLRSICLL*FTFRSS
Trigger: AGAACTCCTAAAGGTAAACAAAAGCAGGCAGATTGA...TCTTAAACATGCAAACATGTGATAGGTTAGCTTTTTAAGGGAGTTATCAGTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS-3UTR CAA 90 bp CCAACTTCAAAGAGAAATCTACCCATTTACCTAACATTTAGATACAGTGGTACTATCTTTCTTCTCTTATaGCCAACCCACGTCCATATA +
Preference number: 5 (lower is better)
Translates to: PTSKRNLPIYLTFRYSGTIFLLL*PTHVHI
Trigger: TATATGGACGTGGGTTGGCAATAAGAGAAGAAAGAT...AGTACCACTGTATCTAAATGTTAGGTAAATGGGTAGATTTCTCTTTGAAGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506585.6
CDS-3UTR CAA 90 bp GATAGTAATTTAACCATGCAACACAATTGCACACTGCCAAGTCACAAATATATGGTTTCTCTTAAAATTTaGTCCAGAGATTGTAGCTCG +
Preference number: 5 (lower is better)
Translates to: DSNLTMQHNCTLPSHKYMVSLKI*SRDCSS
Trigger: CGAGCTACAATCTCTGGACAAAATTTTAAGAGAAAC...CATATATTTGTGACTTGGCAGTGTGCAATTGTGTTGCATGGTTAAATTACTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS CCA 72 bp CGAAAGGAATCAGCGGAACCCAGATCAGGCCGCTGCTaGGGCAGGCGGATTCAGCGAGATTTTTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RKESAEPRSGRC*GRRIQRDFSWV
Trigger: GACCCAGGAAAAATCTCGCTGAATCCGCCTGCCCCAGCAGCGGCCTGATCTGGGTTCCGCTGATTCCTTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000465509.3
ENST00000506585.6
CDS GCA 72 bp TTACGAAAGGAATCAGCGGAACCCAGATCAGGCCGCTaGTGGGGCAGGCGGATTCAGCGAGATTTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: LRKESAEPRSGR*WGRRIQRDFSW
Trigger: CCAGGAAAAATCTCGCTGAATCCGCCTGCCCCAGCAGCGGCCTGATCTGGGTTCCGCTGATTCCTTTCGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000465509.3
ENST00000506585.6
CDS CCA 72 bp CGCTGCTGGGGCAGGCGGATTCAGCGAGATTTTTCCTaGGTCTCCAGTGCCGCTTCAGACAATGAAATCAGC +
Preference number: 6 (lower is better)
Translates to: RCWGRRIQRDFS*VSSAASDNEIS
Trigger: GCTGATTTCATTGTCTGAAGCGGCACTGGAGACCCAGGAAAAATCTCGCTGAATCCGCCTGCCCCAGCAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449553.2
CDS CAA 72 bp GTGAATTTGGCATATTTCTTCCTGGTCCGGGCAAGGTaGTACTTTGGTTCTCAGCTCGAAGGGAACTGCCAC +
Preference number: 6 (lower is better)
Translates to: VNLAYFFLVRAR*YFGSQLEGNCH
Trigger: GTGGCAGTTCCCTTCGAGCTGAGAACCAAAGTACAACCTTGCCCGGACCAGGAAGAAATATGCCAAATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CAA 72 bp TTCTCTCTACAAACAGAGCCCAGGCTGGTCATGCCATaGTCCCAATACTTCTTAAGGGTGGCTAAGTCTCGG +
Preference number: 6 (lower is better)
Translates to: FSLQTEPRLVMP*SQYFLRVAKSR
Trigger: CCGAGACTTAGCCACCCTTAAGAAGTATTGGGACAATGGCATGACCAGCCTGGGCTCTGTTTGTAGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS GCA 72 bp GGTTACTGCATGGTGGTCCTCTTCCTTATGAGCCCTTaGATCATTCGGAACAACTTCATTGGGCTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: GYCMVVLFLMSP*IIRNNFIGLFL
Trigger: CAAGAAGAGCCCAATGAAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAAGAGGACCACCATGCAGTAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS CAA 72 bp TGGCATATTTCTTCCTGGTCCGGGCAAGGTTGTACTTaGGTTCTCAGCTCGAAGGGAACTGCCACTTTCATA +
Preference number: 6 (lower is better)
Translates to: WHISSWSGQGCT*VLSSKGTATFI
Trigger: TATGAAAGTGGCAGTTCCCTTCGAGCTGAGAACCAAAGTACAACCTTGCCCGGACCAGGAAGAAATATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CAA 90 bp TCTCAGCTCGAAGGGAACTGCCACTTTCATAAAATCTCGAATAGCTaGGTATCTGTGCTCTCATCGATGCCAGCTCTTCCTCTCTGGCAT +
Preference number: 6 (lower is better)
Translates to: SQLEGNCHFHKISNS*VSVLSSMPALPLWH
Trigger: ATGCCAGAGAGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATTCGAGATTTTATGAAAGTGGCAGTTCCCTTCGAGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CAA 90 bp GCTTCAATTTTCTCTCTACAAACAGAGCCCAGGCTGGTCATGCCATaGTCCCAATACTTCTTAAGGGTGGCTAAGTCTCGGTCACTGAAC +
Preference number: 6 (lower is better)
Translates to: ASIFSLQTEPRLVMP*SQYFLRVAKSRSLN
Trigger: GTTCAGTGACCGAGACTTAGCCACCCTTAAGAAGTATTGGGACAATGGCATGACCAGCCTGGGCTCTGTTTGTAGAGAGAAAATTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS CAA 90 bp CATTATCTGTGGTTACTGCATGGTGGTCCTCTTCCTTATGAGCCCTaGCATCATTCGGAACAACTTCATTGGGCTCTTCTTGAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: HYLWLLHGGPLPYEP*HHSEQLHWALLESF
Trigger: GAAGCTCTCAAGAAGAGCCCAATGAAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAAGAGGACCACCATGCAGTAACCACAGATAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 72 bp TACTTCTTAAGGGTGGCTAAGTCTCGGTCACTGAACTaGGTGCGGTCCTGTAGTGCTCTTTTTCTAGAACAC +
Preference number: 6 (lower is better)
Translates to: YFLRVAKSRSLN*VRSCSALFLEH
Trigger: GTGTTCTAGAAAAAGAGCACTACAGGACCGCACTCAGTTCAGTGACCGAGACTTAGCCACCCTTAAGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 72 bp TTATCTGTGGTTACTGCATGGTGGTCCTCTTCCTTATaGGCCCTTGCATCATTCGGAACAACTTCATTGGGC +
Preference number: 6 (lower is better)
Translates to: LSVVTAWWSSSL*ALASFGTTSLG
Trigger: GCCCAATGAAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAAGAGGACCACCATGCAGTAACCACAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS GCA 72 bp AAATCTCGAATAGCTTGGTATCTGTGCTCTCATCGATaGCAGCTCTTCCTCTCTGGCATATTCATCCTCAGC +
Preference number: 6 (lower is better)
Translates to: KSRIAWYLCSHR*QLFLSGIFILS
Trigger: GCTGAGGATGAATATGCCAGAGAGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATTCGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS GCA 72 bp TTAAAATTTTGTCCAGAGATTGTAGCTCGGGTGTGGTaGGGTTACGAAAGGAATCAGCGGAACCCAGATCAG +
Preference number: 6 (lower is better)
Translates to: LKFCPEIVARVW*GYERNQRNPDQ
Trigger: CTGATCTGGGTTCCGCTGATTCCTTTCGTAACCGCACCACACCCGAGCTACAATCTCTGGACAAAATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS CCA 72 bp CTCTTAAAATTTTGTCCAGAGATTGTAGCTCGGGTGTaGTGCGGTTACGAAAGGAATCAGCGGAACCCAGAT +
Preference number: 6 (lower is better)
Translates to: LLKFCPEIVARV*CGYERNQRNPD
Trigger: ATCTGGGTTCCGCTGATTCCTTTCGTAACCGCACCACACCCGAGCTACAATCTCTGGACAAAATTTTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS CAA 72 bp TGGTTACTGCATGGTGGTCCTCTTCCTTATGAGCCCTaGCATCATTCGGAACAACTTCATTGGGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: WLLHGGPLPYEP*HHSEQLHWALL
Trigger: AAGAAGAGCCCAATGAAGTTGTTCCGAATGATGCAAGGGCTCATAAGGAAGAGGACCACCATGCAGTAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 72 bp AATGCTGGGCCTGTGTGTTCAGGCTTATATGACCTTTaGATCCCAACTGGTTCAATTTTACAAGGTCGGTGG +
Preference number: 6 (lower is better)
Translates to: NAGPVCSGLYDL*IPTGSILQGRW
Trigger: CCACCGACCTTGTAAAATTGAACCAGTTGGGATTCAAAGGTCATATAAGCCTGAACACACAGGCCCAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS GCA 72 bp GCCACTTTCATAAAATCTCGAATAGCTTGGTATCTGTaGTCTCATCGATGCCAGCTCTTCCTCTCTGGCATA +
Preference number: 6 (lower is better)
Translates to: ATFIKSRIAWYL*SHRCQLFLSGI
Trigger: TATGCCAGAGAGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATTCGAGATTTTATGAAAGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CCA 72 bp AAGGGAACTGCCACTTTCATAAAATCTCGAATAGCTTaGTATCTGTGCTCTCATCGATGCCAGCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: KGTATFIKSRIA*YLCSHRCQLFL
Trigger: GAGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATTCGAGATTTTATGAAAGTGGCAGTTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CAA 72 bp GAAGGGAACTGCCACTTTCATAAAATCTCGAATAGCTaGGTATCTGTGCTCTCATCGATGCCAGCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: EGNCHFHKISNS*VSVLSSMPALP
Trigger: AGGAAGAGCTGGCATCGATGAGAGCACAGATACCAAGCTATTCGAGATTTTATGAAAGTGGCAGTTCCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CAA 90 bp GATGAACTGGCTGGACTGTATATACCAGTTACAATGACATCATTATaGGCAGATGTCCAAGAAGACTGCTGGCTTGAGGGTCGAGCAATA +
Preference number: 6 (lower is better)
Translates to: DELAGLYIPVTMTSL*ADVQEDCWLEGRAI
Trigger: TATTGCTCGACCCTCAAGCCAGCAGTCTTCTTGGACATCTGCCAATAATGATGTCATTGTAACTGGTATATACAGTCCAGCCAGTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS CAA 90 bp TCACCATTTGTGAATTTGGCATATTTCTTCCTGGTCCGGGCAAGGTaGTACTTTGGTTCTCAGCTCGAAGGGAACTGCCACTTTCATAAA +
Preference number: 6 (lower is better)
Translates to: SPFVNLAYFFLVRAR*YFGSQLEGNCHFHK
Trigger: TTTATGAAAGTGGCAGTTCCCTTCGAGCTGAGAACCAAAGTACAACCTTGCCCGGACCAGGAAGAAATATGCCAAATTCACAAATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS CAA 72 bp GCTGGACTGTATATACCAGTTACAATGACATCATTATaGGCAGATGTCCAAGAAGACTGCTGGCTTGAGGGT +
Preference number: 6 (lower is better)
Translates to: AGLYIPVTMTSL*ADVQEDCWLEG
Trigger: ACCCTCAAGCCAGCAGTCTTCTTGGACATCTGCCAATAATGATGTCATTGTAACTGGTATATACAGTCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS CAA 90 bp TCCCAATCCAAGTCCGAACTATTTCACAGTCAACATTTAATTCAGTaGCCACAGCTTCAATTTTCTCTCTACAAACAGAGCCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: SQSKSELFHSQHLIQ*PQLQFSLYKQSPGW
Trigger: CCAGCCTGGGCTCTGTTTGTAGAGAGAAAATTGAAGCTGTGGCAACTGAATTAAATGTTGACTGTGAAATAGTTCGGACTTGGATTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6
CDS TCA 72 bp ATCATTATTGGCAGATGTCCAAGAAGACTGCTGGCTTaGGGGTCGAGCAATATTAACCACATTTCTGACTGT +
Preference number: 6 (lower is better)
Translates to: IIIGRCPRRLLA*GSSNINHISDC
Trigger: ACAGTCAGAAATGTGGTTAATATTGCTCGACCCTCAAGCCAGCAGTCTTCTTGGACATCTGCCAATAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS TCA 72 bp TCAATTTTACAAGGTCGGTGGCACACAGAAGGCTTTTaGGGTACTGTCATTTCAGAAGCTTGTACTGAAGAG +
Preference number: 6 (lower is better)
Translates to: SILQGRWHTEGF*GTVISEACTEE
Trigger: CTCTTCAGTACAAGCTTCTGAAATGACAGTACCTCAAAAGCCTTCTGTGTGCCACCGACCTTGTAAAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS TCA 72 bp TCCCAGAATTCTCTGGGGGTAATCGCTAACTGCCAATaGAAACACTTCACGGATTTCCAAGTTTTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: SQNSLGVIANCQ*KHFTDFQVLCS
Trigger: AGAACACAAAACTTGGAAATCCGTGAAGTGTTTTCATTGGCAGTTAGCGATTACCCCCAGAGAATTCTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000472135.2
ENST00000506585.6
CDS GCA 72 bp GTCACTTCATATTCTGACTGCCATCCTCAATCTGCCTaGTTTTGTTTACCTTTAGGAGTTCTGAGGGAGTTT +
Preference number: 6 (lower is better)
Translates to: VTSYSDCHPQSA*FCLPLGVLREF
Trigger: AAACTCCCTCAGAACTCCTAAAGGTAAACAAAAGCAGGCAGATTGAGGATGGCAGTCAGAATATGAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS CAA 90 bp CTTTTGTTTACCTTTAGGAGTTCTGAGGGAGTTTCTCTTAAAATTTaGTCCAGAGATTGTAGCTCGGGTGTGGTGCGGTTACGAAAGGAA +
Preference number: 6 (lower is better)
Translates to: LLFTFRSSEGVSLKI*SRDCSSGVVRLRKE
Trigger: TTCCTTTCGTAACCGCACCACACCCGAGCTACAATCTCTGGACAAAATTTTAAGAGAAACTCCCTCAGAACTCCTAAAGGTAAACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373177.3
ENST00000506585.6
CDS CAA 90 bp GCTGTTCCAGATTCAGAGTTCTTACTACTCATCTTTCTTCTCTTATaGCCAACCCACGTCCATATATGGTCACTTCATATTCTGACTGCC +
Preference number: 6 (lower is better)
Translates to: AVPDSEFLLLIFLLL*PTHVHIWSLHILTA
Trigger: GGCAGTCAGAATATGAAGTGACCATATATGGACGTGGGTTGGCAATAAGAGAAGAAAGATGAGTAGTAAGAACTCTGAATCTGGAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506585.6
CDS TCA 72 bp AATATTAACCACATTTCTGACTGTGATGTCTGGAGCTaGCAAAGAGGTTCCTGTTGTTGCTGTTCCAGATTC +
Preference number: 6 (lower is better)
Translates to: NINHISDCDVWS*QRGSCCCCSRF
Trigger: GAATCTGGAACAGCAACAACAGGAACCTCTTTGTCAGCTCCAGACATCACAGTCAGAAATGTGGTTAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS GCA 72 bp ACAATGACATCATTATTGGCAGATGTCCAAGAAGACTaGTGGCTTGAGGGTCGAGCAATATTAACCACATTT +
Preference number: 6 (lower is better)
Translates to: TMTSLLADVQED*WLEGRAILTTF
Trigger: AAATGTGGTTAATATTGCTCGACCCTCAAGCCAGCAGTCTTCTTGGACATCTGCCAATAATGATGTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS CCA 72 bp ATCTTTCTTCTCTTATTGCCAACCCACGTCCATATATaGTCACTTCATATTCTGACTGCCATCCTCAATCTG +
Preference number: 6 (lower is better)
Translates to: IFLLLLPTHVHI*SLHILTAILNL
Trigger: CAGATTGAGGATGGCAGTCAGAATATGAAGTGACCATATATGGACGTGGGTTGGCAATAAGAGAAGAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506585.6
CDS TCA 72 bp TTGATGAACTGGCTGGACTGTATATACCAGTTACAATaGCATCATTATTGGCAGATGTCCAAGAAGACTGCT +
Preference number: 6 (lower is better)
Translates to: LMNWLDCIYQLQ*HHYWQMSKKTA
Trigger: AGCAGTCTTCTTGGACATCTGCCAATAATGATGTCATTGTAACTGGTATATACAGTCCAGCCAGTTCATCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS TCA 72 bp ATTCAGGTTTATTTAGTCATTGGAGGGTCTCTTGCCTaGCCAACGATGAATAAGCTTTCACATGTATACAGT +
Preference number: 6 (lower is better)
Translates to: IQVYLVIGGSLA*PTMNKLSHVYS
Trigger: ACTGTATACATGTGAAAGCTTATTCATCGTTGGTCAGGCAAGAGACCCTCCAATGACTAAATAAACCTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465509.3
CDS TCA 72 bp GTACTGAAGAGTTTCCATAGTTTTTCTTTGCGTGATTaGATACTGAGTTTCCAGCATTTAGCACACTTGTCT +
Preference number: 6 (lower is better)
Translates to: VLKSFHSFSLRD*ILSFQHLAHLS
Trigger: AGACAAGTGTGCTAAATGCTGGAAACTCAGTATTCAATCACGCAAAGAAAAACTATGGAAACTCTTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000449553.2
ENST00000472135.2
ENST00000506585.6
CDS CAA 72 bp AAGTCCGAACTATTTCACAGTCAACATTTAATTCAGTaGCCACAGCTTCAATTTTCTCTCTACAAACAGAGC +
Preference number: 6 (lower is better)
Translates to: KSELFHSQHLIQ*PQLQFSLYKQS
Trigger: GCTCTGTTTGTAGAGAGAAAATTGAAGCTGTGGCAACTGAATTAAATGTTGACTGTGAAATAGTTCGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297977.9
ENST00000373177.3
ENST00000506585.6