RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HDLBP (Homo sapiens)

Ensembl gene IDs: ENSG00000115677

Ensembl transcript IDs: ENST00000310931.10, ENST00000310931.9, ENST00000373292.8, ENST00000391975.5, ENST00000391976.6, ENST00000413241.5, ENST00000417540.5, ENST00000420451.5, ENST00000422080.5, ENST00000422933.5, ENST00000423693.5, ENST00000425989.5, ENST00000426343.5, ENST00000427007.5, ENST00000427183.6, ENST00000427487.5, ENST00000428482.5, ENST00000430918.5, ENST00000441124.5, ENST00000442714.5, ENST00000442730.1, ENST00000444092.5, ENST00000449504.5, ENST00000449864.5, ENST00000452065.5, ENST00000452931.1, ENST00000453141.5, ENST00000458564.5, ENST00000459788.1, ENST00000460826.1, ENST00000462130.1, ENST00000467435.1, ENST00000470482.5, ENST00000470710.1, ENST00000471294.1, ENST00000476807.5, ENST00000477477.1, ENST00000479169.5, ENST00000479894.1, ENST00000483086.1, ENST00000484412.1, ENST00000487169.5, ENST00000488013.1, ENST00000488923.1, ENST00000490697.1, ENST00000496569.1, ENST00000498595.5

Found 1220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGGATGGCCTGTaGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: PGPAPRGWPAQPDGL*AGWKCPLPLQMGLL
Trigger: CAGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 90 bp GCTCCTAGGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTaGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTGGCCACTGAC +
Preference number: 1 (lower is better)
Translates to: APRGWPAQPDGLWAG*KCPLPLQMGLLATD
Trigger: GTCAGTGGCCAGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCCTAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 90 bp CACTCCCACTCCAGATGGGCCTGCTGGCCACTGACCCACCTGTGCTaGGGGAGAGCGCCAGCCTCCAGCTTAGGTACACGGCGCCCACCC +
Preference number: 1 (lower is better)
Translates to: HSHSRWACWPLTHLC*GRAPASSLGTRRPP
Trigger: GGGTGGGCGCCGTGTACCTAAGCTGGAGGCTGGCGCTCTCCCTCAGCACAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGAGTGGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 90 bp GTGCCTACCACCTTGCCTCCAGGCTCCACTCACCAGACCTCAGGCTaGGGGTCTGGCAGTGGAGGTAGGGGCAGGGACCCTTGGTGCTTT +
Preference number: 1 (lower is better)
Translates to: VPTTLPPGSTHQTSG*GSGSGGRGRDPWCF
Trigger: AAAGCACCAAGGGTCCCTGCCCCTACCTCCACTGCCAGACCCTCAGCCTGAGGTCTGGTGAGTGGAGCCTGGAGGCAAGGTGGTAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 90 bp CAGCTCCAGGAACCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTaGACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: QLQEPASCCPLPGLP*TLTPVLRRSGSWRR
Trigger: CCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGGTTCCTGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 90 bp AGACACTGTGACGGCCACAGGGGACCCAGATGGTGCCTACCACCTTaGCTCCAGGCTCCACTCACCAGACCTCAGGCTGAGGGTCTGGCA +
Preference number: 1 (lower is better)
Translates to: RHCDGHRGPRWCLPP*LQAPLTRPQAEGLA
Trigger: TGCCAGACCCTCAGCCTGAGGTCTGGTGAGTGGAGCCTGGAGGCAAGGTGGTAGGCACCATCTGGGTCCCCTGTGGCCGTCACAGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 90 bp TCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTaGTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTA +
Preference number: 1 (lower is better)
Translates to: SESRVSRHPAAWSAF*STSCSRPHAIVSAL
Trigger: TAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 90 bp CAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTaGTCTGCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATC +
Preference number: 1 (lower is better)
Translates to: QMPPSESRVSRHPAA*SAFCSTSCSRPHAI
Trigger: GATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 90 bp ACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATaGCACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAG +
Preference number: 1 (lower is better)
Translates to: TRKPETRAPSSALTA*HRCLPRRAGSLGIQ
Trigger: CTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 90 bp GGGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATaGAGATGGGGAAGAGGTGACAGCCCTTCCCCACTGGCCTCCCCC +
Preference number: 1 (lower is better)
Translates to: GSWKQAANRTEFQNS*RWGRGDSPSPLASP
Trigger: GGGGGAGGCCAGTGGGGAAGGGCTGTCACCTCTTCCCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 90 bp CCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTaGACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGG +
Preference number: 1 (lower is better)
Translates to: PDTCAEALWQLEEAD*TPQTGLSGPRETGR
Trigger: CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 90 bp GTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATaGTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACCGTGAAAAC +
Preference number: 1 (lower is better)
Translates to: VSRHPAAWSAFCSTS*SRPHAIVSALDREN
Trigger: GTTTTCACGGTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 90 bp GGTCTTCCTTGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTaGAGGAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAA +
Preference number: 1 (lower is better)
Translates to: GLPCTLTPVLRRSGS*RRLIALHKQDCLDQ
Trigger: TTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCAAGGAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 90 bp GCCCAGGGCTGTCCTGACAGCACAGACGCTTCAGGGAGACAGGCCTaGGGACAGTCATGTCATCACCCTTGCAACAACCACCCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: AQGCPDSTDASGRQA*GQSCHHPCNNHPKE
Trigger: TTCCTTTGGGTGGTTGTTGCAAGGGTGATGACATGACTGTCCCCAGGCCTGTCTCCCTGAAGCGTCTGTGCTGTCAGGACAGCCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 90 bp ATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGAGGCGCTCTaGCAGCTGGAGGAGGCTGATTGCACTCCACAAACAGGACTGTCT +
Preference number: 1 (lower is better)
Translates to: IARSSLHPDTCAEAL*QLEEADCTPQTGLS
Trigger: AGACAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 90 bp TTTACCATTCCTGTAAACAGGCCCATTCAGGGCTGCCTGAGCAAATaGGGACTTGCCGAGGCAGCTGCAACTAGACTTGGGCTAAGCCGT +
Preference number: 1 (lower is better)
Translates to: FTIPVNRPIQGCLSK*GLAEAAATRLGLSR
Trigger: ACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTTTACAGGAATGGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 90 bp GACGCTTCAGGGAGACAGGCCTGGGGACAGTCATGTCATCACCCTTaGAACAACCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGA +
Preference number: 1 (lower is better)
Translates to: DASGRQAWGQSCHHP*NNHPKEKRALNSLG
Trigger: TCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGGTTGTTGCAAGGGTGATGACATGACTGTCCCCAGGCCTGTCTCCCTGAAGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 90 bp TATGACACTGTAGAAAAGACAGGAGGAACCCGCTGCGATGGAGATTaGGGGGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAA +
Preference number: 1 (lower is better)
Translates to: YDTVEKTGGTRCDGD*GELEASSQQDRVPE
Trigger: TTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCCCCCCAATCTCCATCGCAGCGGGTTCCTCCTGTCTTTTCTACAGTGTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 90 bp TTCCAATCCCAATTTACCATTCCTGTAAACAGGCCCATTCAGGGCTaGCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAACTAGACTT +
Preference number: 1 (lower is better)
Translates to: FQSQFTIPVNRPIQG*LSKWGLAEAAATRL
Trigger: AAGTCTAGTTGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTTTACAGGAATGGTAAATTGGGATTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 90 bp AAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTaGCGGACACAGATAAGGATGTTAAGACCAGAAAACCAGAGACTA +
Preference number: 1 (lower is better)
Translates to: KYLGQDNSLAAQSPP*RTQIRMLRPENQRL
Trigger: TAGTCTCTGGTTTTCTGGTCTTAACATCCTTATCTGTGTCCGCCACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 90 bp CCGTCTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTaGGTTATTCAACTGAGAGTGAGGTGTCAAGGCGGAAGCGACTGT +
Preference number: 1 (lower is better)
Translates to: PSGSTQEFESEDDQA*VIQLRVRCQGGSDC
Trigger: ACAGTCGCTTCCGCCTTGACACCTCACTCTCAGTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGGGGCACGGCCAGGCCTaGAGGAGCGGCCGCACACAC +
Preference number: 2 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGGHGQA*RSGRTH
Trigger: GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCC...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTCAGTGGAGCAGGTCCTaGGCGGGCACGGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAQWSRS*AGTARP
Trigger: AGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTG...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTaGTGGCCACTGACCCACCTG +
Preference number: 2 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSHSRWA*WPLTHL
Trigger: CAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGAGTG...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTAGGGGCAGGGACCCTTaGTGCTTTCAGACCCCACGG +
Preference number: 2 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPARGRDP*CFQTPR
Trigger: CCGTGGGGTCTGAAAGCACCAAGGGTCCCTGCCCCT...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTGGGAGGGGCTGCAGGTaGTGTGAAGAAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAGRGCR*CEEEPS
Trigger: GCTGGGCTCTTCTTCACACCACCTGCAGCCCCTCCC...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGCACCAGACCTCAGGCTaGGGGTCTGGCAGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPHQTSG*GSGSGG
Trigger: ACCTCCACTGCCAGACCCTCAGCCTGAGGTCTGGTG...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCAGCTCCAGGAACCTaGCTCCTGCTGTCCATTGCC +
Preference number: 2 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGPAPGT*LLLSIA
Trigger: GGCAATGGACAGCAGGAGGCAGGTTCCTGGAGCTGG...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCGGCCTGTGGGCGGGGTaGAAGTGCCCACTCCCACTC +
Preference number: 2 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLGLWAG*KCPLPL
Trigger: GAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCC...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCAAACCATTGTGTGGTTaGGTTTGGGTCAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLKPLCG*VWVSRL
Trigger: CAGCCTGCTGACCCAAACCCAACCACACAATGGTTT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.9
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
3UTR-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGTGTGCTGAGGCGCTCTaGCAGCTGGAGGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPCAEAL*QLEEAD
Trigger: ATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACA...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAGCCTGCACAGCCGGATaGCCTGTGGGCGGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAACTAG*PVGGVE
Trigger: TTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGC...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.9
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
3UTR-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.9
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
3UTR-3UTR CCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCCACTCCCACTCCAGATaGGCCTGCTGGCCACTGACC +
Preference number: 2 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLHSHSR*ACWPLT
Trigger: GGTCAGTGGCCAGCAGGCCCATCTGGAGTGGGAGTG...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACAGTGGAGCAGGTCCTaGGCGGGCACGGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: DVKTRKPETRAPSSALTAQWSRS*AGTARP
Trigger: AGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAGGGAGGGGCTGCAGGTaGTGTGAAGAAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAGRGCR*CEEEPS
Trigger: GCTGGGCTCTTCTTCACACCACCTGCAGCCCCTCCC...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTAAAATCAGGACTGCCTaGGAACCCGTCACCCTCTGC +
Preference number: 2 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSKIRTA*EPVTLC
Trigger: GCAGAGGGTGACGGGTTCTCAGGCAGTCCTGATTTT...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACTGACCCACCTGTGCTaGGGGAGAGCGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: DVKTRKPETRAPSSALTALTHLC*GRAPAS
Trigger: GGAGGCTGGCGCTCTCCCTCAGCACAGGTGGGTCAG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCTGGGGTGGCACTAACTaGACAGAGACCACTCCACGC +
Preference number: 2 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLWGGTN*TETTPR
Trigger: GCGTGGAGTGGTCTCTGTGCAGTTAGTGCCACCCCA...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGACAAACAGGACTGTCTaGACCAAGGGAAACTGGCAG +
Preference number: 2 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPTNRTV*TKGNWQ
Trigger: CTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGT...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCCTGCACAGCCGGATaGCCTGTGGGCGGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: KDVKTRKPETRAPSSALTACTAG*PVGGVE
Trigger: TTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGC...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACGCAGCTGGAGGAGGCTaGTTGCACTCCACAAACAGG +
Preference number: 2 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDAAGGG*LHSTNR
Trigger: CCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGC...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTCACCAGACCTCAGGCTaGGGGTCTGGCAGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPHQTSG*GSGSGG
Trigger: ACCTCCACTGCCAGACCCTCAGCCTGAGGTCTGGTG...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGCTCGGCCCTAGACCGTaGAAACTGCCAGTCACCCGG +
Preference number: 2 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGLGPRP*KLPVTR
Trigger: CCGGGTGACTGGCAGTTTTCACGGTCTAGGGCCGAG...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGAATCCTAGCCACGGCTaGGGAGCTCTCGTGATGAAG +
Preference number: 2 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLNPSHG*GALVMK
Trigger: CTTCATCACGAGAGCTCCGCAGCCGTGGCTAGGATT...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: VLNSGAGPERARPGLEERRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.9
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
3UTR-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGGGGCACGGCCAGGCCTaGAGGAGCGGCCGCACACAC +
Preference number: 2 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVGHGQA*RSGRTH
Trigger: GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCC...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310931.9
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
3UTR-3UTR CCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATCCAGATGGGCCTGCTaGCCACTGACCCACCTGTGC +
Preference number: 2 (lower is better)
Translates to: DVKTRKPETRAPSSALTASRWAC*PLTHLC
Trigger: GCACAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGA...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGCCTGCTCCTAGGGGCTaGCCTGCACAGCCGGATGGC +
Preference number: 2 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLPAPRG*PAQPDG
Trigger: GCCATCCGGCTGTGCAGGCCAGCCCCTAGGAGCAGG...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCAGTGGAGCAGGTCCTaGGCGGGCACGGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVQWSRS*AGTARP
Trigger: AGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.9
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
3UTR-3UTR GCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTAGGGGACCCAGATGGTaGCTACCACCTTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPRGPRW*LPPCLQ
Trigger: CTGGAGGCAAGGTGGTAGGCACCATCTGGGTCCCCT...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGTGGGCGGGGTGGAAGTaGCCACTCCCACTCCAGATG +
Preference number: 2 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSWAGWK*PLPLQM
Trigger: CATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCA...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACATCCAGATGGGCCTGCTaGCCACTGACCCACCTGTGC +
Preference number: 2 (lower is better)
Translates to: KDVKTRKPETRAPSSALTSRWAC*PLTHLC
Trigger: GCACAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGA...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATGGCCTGTGGGCGGGGTaGAAGTGCCCACTCCCACTC +
Preference number: 2 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNGLWAG*KCPLPL
Trigger: GAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCC...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACGGCATCCAGCGGCGTaGTCTGCATTCTGCTCTACC +
Preference number: 2 (lower is better)
Translates to: DVKTRKPETRAPSSALTARHPAA*SAFCST
Trigger: GGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACCTGGAGGAGGCTGATTaGACTCCACAAACAGGACTG +
Preference number: 2 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDLEEAD*TPQTGL
Trigger: CAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAG...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACCTCCTGCTGTCCATTaGCAGGTCTTCCTTGCACCC +
Preference number: 2 (lower is better)
Translates to: DVKTRKPETRAPSSALTAPPAVH*QVFLAP
Trigger: GGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGGGGACCCAGATGGTaGCTACCACCTTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSRGPRW*LPPCLQ
Trigger: CTGGAGGCAAGGTGGTAGGCACCATCTGGGTCCCCT...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGTGGGGTGGCACTAACTaGACAGAGACCACTCCACGC +
Preference number: 2 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGWGGTN*TETTPR
Trigger: GCGTGGAGTGGTCTCTGTGCAGTTAGTGCCACCCCA...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCACAAACAGGACTGTCTaGACCAAGGGAAACTGGCAG +
Preference number: 2 (lower is better)
Translates to: QGLSASSGVVCILLYLMLTNRTV*TKGNWQ
Trigger: CTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGT...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGCACAGGGGACCCAGATaGTGCCTACCACCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSHRGPR*CLPPCL
Trigger: GAGGCAAGGTGGTAGGCACCATCTGGGTCCCCTGTG...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACACACAGGGGACCCAGATaGTGCCTACCACCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: KDVKTRKPETRAPSSALTHRGPR*CLPPCL
Trigger: GAGGCAAGGTGGTAGGCACCATCTGGGTCCCCTGTG...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGTCCAGATGGGCCTGCTaGCCACTGACCCACCTGTGC +
Preference number: 2 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLSRWAC*PLTHLC
Trigger: GCACAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGA...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTAAAATCAGGACTGCCTaGGAACCCGTCACCCTCTGC +
Preference number: 2 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPKIRTA*EPVTLC
Trigger: GCAGAGGGTGACGGGTTCTCAGGCAGTCCTGATTTT...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGCCTCCTGCTGTCCATTaGCAGGTCTTCCTTGCACCC +
Preference number: 2 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSPPAVH*QVFLAP
Trigger: GGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGG...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATTGGGCGGGGTGGAAGTaGCCACTCCCACTCCAGATG +
Preference number: 2 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNWAGWK*PLPLQM
Trigger: CATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCA...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACACTAGACCGTGAAAACTaGCAGTCACCCGGGACCTGC +
Preference number: 2 (lower is better)
Translates to: KDVKTRKPETRAPSSALTLDREN*QSPGTC
Trigger: GCAGGTCCCGGGTGACTGGCAGTTTTCACGGTCTAG...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGCTAGACCGTGAAAACTaGCAGTCACCCGGGACCTGC +
Preference number: 2 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVLDREN*QSPGTC
Trigger: GCAGGTCCCGGGTGACTGGCAGTTTTCACGGTCTAG...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTTGGACCAAGGGAAACTaGCAGGAGGGAGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPWTKGN*QEGGGK
Trigger: TTTCCCACCTCCCTCCTGCCAGTTTCCCTTGGTCCA...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGGCAGCTGGAGGAGGCTaGTTGCACTCCACAAACAGG +
Preference number: 2 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLAAGGG*LHSTNR
Trigger: CCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGC...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCCATTCAGGGCTGCCTaGGCAAATGGGGACTTGCCG +
Preference number: 2 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNPFRAA*ANGDLP
Trigger: CGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGCTGGAGGAGGCTGATTaGACTCCACAAACAGGACTG +
Preference number: 2 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGLEEAD*TPQTGL
Trigger: CAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAG...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGCCTCCTGCTGTCCATTaGCAGGTCTTCCTTGCACCC +
Preference number: 2 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLPPAVH*QVFLAP
Trigger: GGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGG...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGACCTCCCCCAACCTGTaGGCATCTCAATCACAGCAG +
Preference number: 2 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVTSPNL*ASQSQQ
Trigger: CTGCTGTGATTGAGATGCGCACAGGTTGGGGGAGGT...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGTGGACCAAGGGAAACTaGCAGGAGGGAGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSWTKGN*QEGGGK
Trigger: TTTCCCACCTCCCTCCTGCCAGTTTCCCTTGGTCCA...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATTGTGCTGAGGCGCTCTaGCAGCTGGAGGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNCAEAL*QLEEAD
Trigger: ATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACA...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACACAAGAGACGGGTGTGTaGGGTGGCACTAACTGCACA +
Preference number: 2 (lower is better)
Translates to: KDVKTRKPETRAPSSALTQETGV*GGTNCT
Trigger: TGTGCAGTTAGTGCCACCCCACACACCCGTCTCTTG...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCCACTCCACGCCGGCTaGGGTAGAAAGAAGGCAACT +
Preference number: 2 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNPLHAG*GRKKAT
Trigger: AGTTGCCTTCTTTCTACCTCAGCCGGCGTGGAGTGG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGTTGCCAGGTCTTCCTTaGACCCTGACACCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: PPKGKESAEQFRKGLASKLPGLP*TLTPVL
Trigger: CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAA...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATTGGGGTGGCACTAACTaGACAGAGACCACTCCACGC +
Preference number: 2 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNWGGTN*TETTPR
Trigger: GCGTGGAGTGGTCTCTGTGCAGTTAGTGCCACCCCA...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.9
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
3UTR-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGTGGACCAAGGGAAACTaGCAGGAGGGAGGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLWTKGN*QEGGGK
Trigger: TTTCCCACCTCCCTCCTGCCAGTTTCCCTTGGTCCA...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGGGAAGGGCTGTGAGATaGATGGGCGTGAGTCAGCTT +
Preference number: 2 (lower is better)
Translates to: PPKGKESAEQFRKGLASKGRAVR*MGVSQL
Trigger: AAGCTGACTCACGCCCATCCATCTCACAGCCCTTCC...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATAATCCTAGCCACGGCTaGGGAGCTCTCGTGATGAAG +
Preference number: 2 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNNPSHG*GALVMK
Trigger: CTTCATCACGAGAGCTCCGCAGCCGTGGCTAGGATT...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACCACTCCAGATGGGCCTaGTGGCCACTGACCCACCTG +
Preference number: 2 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNHSRWA*WPLTHL
Trigger: CAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGAGTG...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR GCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACTGGGCGGGGTGGAAGTaGCCACTCCCACTCCAGATG +
Preference number: 2 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNWAGWK*PLPLQM
Trigger: CATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCA...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGTTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATACAAACAGGACTGTCTaGACCAAGGGAAACTGGCAG +
Preference number: 2 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNTNRTV*TKGNWQ
Trigger: CTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGT...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACCGGCATCCAGCGGCGTaGTCTGCATTCTGCTCTACC +
Preference number: 2 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNRHPAA*SAFCST
Trigger: GGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCG...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR TCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACCCACTCCACGCCGGCTaGGGTAGAAAGAAGGCAACT +
Preference number: 2 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNPLHAG*GRKKAT
Trigger: AGTTGCCTTCTTTCTACCTCAGCCGGCGTGGAGTGG...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.9
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
3UTR-3UTR CCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACTTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 72 bp GGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTaGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: GWPAQPDGLWAG*KCPLPLQMGLL
Trigger: CAGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 72 bp GCTCCTAGGGGCTGGCCTGCACAGCCGGATGGCCTGTaGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATG +
Preference number: 3 (lower is better)
Translates to: APRGWPAQPDGL*AGWKCPLPLQM
Trigger: CATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCCTAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 72 bp TCCAGATGGGCCTGCTGGCCACTGACCCACCTGTGCTaGGGGAGAGCGCCAGCCTCCAGCTTAGGTACACGG +
Preference number: 3 (lower is better)
Translates to: SRWACWPLTHLC*GRAPASSLGTR
Trigger: CCGTGTACCTAAGCTGGAGGCTGGCGCTCTCCCTCAGCACAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 72 bp CCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTaGTCTGCATTCTGCTCTACCTCATGCTCTAGGCCC +
Preference number: 3 (lower is better)
Translates to: PSESRVSRHPAA*SAFCSTSCSRP
Trigger: GGGCCTAGAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 72 bp GCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATaGTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTG +
Preference number: 3 (lower is better)
Translates to: ACAERGHGFRRG*SPTRKQLPTQL
Trigger: CAACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
3UTR GCA 72 bp CATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATaGTCTAGGCCCCATGCCATCGTCTCGGCCCTAGAC +
Preference number: 3 (lower is better)
Translates to: HPAAWSAFCSTS*SRPHAIVSALD
Trigger: GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 72 bp AGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTaGTCTACCTCATGCTCTAGGCCCCATGCCATCGTC +
Preference number: 3 (lower is better)
Translates to: RVSRHPAAWSAF*STSCSRPHAIV
Trigger: GACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CAA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACATGGTGCCTACCACCTaGCCTCCAGGCTCCACTCAC +
Preference number: 3 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDMVPTT*PPGSTH
Trigger: GTGAGTGGAGCCTGGAGGCAAGGTGGTAGGCACCAT...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 72 bp CTTTCAGACCCCACGGCAGGTAAAATCAGGACTGCCTaGGAACCCGTCACCCTCTGCCTCTCAGGTCACCCC +
Preference number: 3 (lower is better)
Translates to: LSDPTAGKIRTA*EPVTLCLSGHP
Trigger: GGGGTGACCTGAGAGGCAGAGGGTGACGGGTTCTCAGGCAGTCCTGATTTTACCTGCCGTGGGGTCTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 72 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTaGAGGAGGCTGATTGCACTCCACAAACAGGACTGT +
Preference number: 3 (lower is better)
Translates to: CTLTPVLRRSGS*RRLIALHKQDC
Trigger: ACAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CAA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTGAAGAGGGCAAACGTTaGGCTTTTATAAAGTCAAGG +
Preference number: 3 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAEEGKR*AFIKSR
Trigger: CCTTGACTTTATAAAAGCCAAACGTTTGCCCTCTTC...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 72 bp TGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTaGACTCCACAAACAGGACTGTCTGGACCAAGGGAA +
Preference number: 3 (lower is better)
Translates to: CAEALWQLEEAD*TPQTGLSGPRE
Trigger: TTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CAA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGATGGTGCCTACCACCTaGCCTCCAGGCTCCACTCAC +
Preference number: 3 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSMVPTT*PPGSTH
Trigger: GTGAGTGGAGCCTGGAGGCAAGGTGGTAGGCACCAT...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 72 bp GTGGCACTAACTGCACAGAGACCACTCCACGCCGGCTaGGGTAGAAAGAAGGCAACTGAACACACAGCAGCT +
Preference number: 3 (lower is better)
Translates to: VALTAQRPLHAG*GRKKATEHTAA
Trigger: AGCTGCTGTGTGTTCAGTTGCCTTCTTTCTACCTCAGCCGGCGTGGAGTGGTCTCTGTGCAGTTAGTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 72 bp AAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATaGAGATGGGGAAGAGGTGACAGCCCTTCCCCACTG +
Preference number: 3 (lower is better)
Translates to: KQAANRTEFQNS*RWGRGDSPSPL
Trigger: CAGTGGGGAAGGGCTGTCACCTCTTCCCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 72 bp CAATTTACCATTCCTGTAAACAGGCCCATTCAGGGCTaGCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: QFTIPVNRPIQG*LSKWGLAEAAA
Trigger: TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTTTACAGGAATGGTAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR GCA 72 bp AGTAGACAGATCCCGGGAAAGGCAGGAAAAGGGCCTTaGTTTCTTTCCCTGTTTCCTAAGCCGTGGTCACCC +
Preference number: 3 (lower is better)
Translates to: SRQIPGKAGKGP*FLSLFPKPWSP
Trigger: GGGTGACCACGGCTTAGGAAACAGGGAAAGAAAGCAAGGCCCTTTTCCTGCCTTTCCCGGGATCTGTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 72 bp AACCACCAGAAACATCTCAATCAAGAGACGGGTGTGTaGGGTGGCACTAACTGCACAGAGACCACTCCACGC +
Preference number: 3 (lower is better)
Translates to: NHQKHLNQETGV*GGTNCTETTPR
Trigger: GCGTGGAGTGGTCTCTGTGCAGTTAGTGCCACCCCACACACCCGTCTCTTGATTGAGATGTTTCTGGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR-3UTR CAA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAGAAGAGGGCAAACGTTaGGCTTTTATAAAGTCAAGG +
Preference number: 3 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAEEGKR*AFIKSR
Trigger: CCTTGACTTTATAAAAGCCAAACGTTTGCCCTCTTC...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR CCA 72 bp GGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTaGCGGACACAGATAAGGATGTTAAGACCAGAAAAC +
Preference number: 3 (lower is better)
Translates to: GQDNSLAAQSPP*RTQIRMLRPEN
Trigger: GTTTTCTGGTCTTAACATCCTTATCTGTGTCCGCCACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 72 bp TTTCCCTGTTTCCTAAGCCGTGGTCACCCTAGCCTATaGAGCTGGAAGCTATATTCCTTCCAATCCCAATTT +
Preference number: 3 (lower is better)
Translates to: FPCFLSRGHPSL*SWKLYSFQSQF
Trigger: AAATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGCTTAGGAAACAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
3UTR TCA 72 bp TCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTaGGTTATTCAACTGAGAGTGAGGTGTCAAGGCGGA +
Preference number: 3 (lower is better)
Translates to: STQEFESEDDQA*VIQLRVRCQGG
Trigger: TCCGCCTTGACACCTCACTCTCAGTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310931.9
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCCGTCGGCCCCACGTaGCGTGCGCGCAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPVGPT*RARSQS
Trigger: GGATTGGCTGCGCGCACGTCACGTGGGGCCGACGGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391976.6
CDS-3UTR GCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCCGCCCGCTGGTCCTaGCGCTGGCTTACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPARWS*RWLTRP
Trigger: GGGGCGAGTAAGCCAGCGGCAGGACCAGCGGGCGGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCGGAGCCCCGTCACAGTaGCGCAGTTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLGAPSQ*RSWGLG
Trigger: CCCCAGACCCCAACTGCGTCACTGTGACGGGGCTCC...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCGCCGCACTCCTCCATaGTGGAGCGGATCAGACGGC +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLRRTPP*WSGSDG
Trigger: GCCGTCTGATCCGCTCCATCATGGAGGAGTGCGGCG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGCCTCTGCGGATaGCGAAGTGGCGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLPGLCG*RSGGGA
Trigger: AGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAATGATGCGGGCGTaGACGCGGTGGTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPMMRA*TRWSSG
Trigger: CCCGCTGGACCACCGCGTTCACGCCCGCATCATTGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTGCCGCGGGCACCAATaGTGCGGGCGTGAACGCGGT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQCRGHQ*CGRERG
Trigger: ACCGCGTTCACGCCCGCATCATTGGTGCCCGCGGCA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGTCTCGCTTGGCCTGCTaGACGCCCTGTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLSRLAC*TPCGSP
Trigger: GGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGA...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGCCTGCACAGCCGGATaGCCTGTGGGCGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLACTAG*PVGGVE
Trigger: TTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCCTGGCCTCTGCGGATaGCGAAGTGGCGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSPGLCG*RSGGGA
Trigger: AGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGG...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCTGGCCTCTGCGGATaGCGAAGTGGCGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPGLCG*RSGGGA
Trigger: AGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACCTGCTGCACGCCCTGTaGGTCCCCCTCGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHLLHAL*VPLDAD
Trigger: ATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAG...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCTGCTGCACGCCCTGTaGGTCCCCCTCGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQLLHAL*VPLDAD
Trigger: ATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCTGCTGCACGCCCTGTaGGTCCCCCTCGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLLLHAL*VPLDAD
Trigger: ATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAGGGGCAGGGACCCTTaGTGCTTTCAGACCCCACGG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLRGRDP*CFQTPR
Trigger: CCGTGGGGTCTGAAAGCACCAAGGGTCCCTGCCCCT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTGGGCCCCCGCCCGCTaGTCCTGCCGCTGGCTTACT +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEWAPAR*SCRWLT
Trigger: AGTAAGCCAGCGGCAGGACCAGCGGGCGGGGGCCCA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCTTCCACGGGAAAGTaGATGTGGACCCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPSTGK*MWTPPH
Trigger: GTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCCTTCCACGGGAAAGTaGATGTGGACCCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLPSTGK*MWTPPH
Trigger: GTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCAGATGGGGAAGAGGTaGCAGCCCTTCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLQMGKR*QPFPTG
Trigger: GCCAGTGGGGAAGGGCTGTCACCTCTTCCCCATCTG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTCTCGCTTGGCCTGCTaGACGCCCTGTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEESRLAC*TPCGSP
Trigger: GGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCTCCAGCTCCTTCTGTaGCTCTCGGACGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLLQLLL*LSDGVL
Trigger: GAGGACGCCGTCCGAGAGGCACAGAAGGAGCTGGAG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGGCCCGGTCCAAATTTaGAGCGAGGCCCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQGPVQI*SEARDG
Trigger: GCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGAGCCTTCTCACTGCTaGTGGCGGTCCAGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLEPSHC*WRSRVR
Trigger: ACGCACCCTGGACCGCCAGCAGCAGTGAGAAGGCTC...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCGAGCCTTCTCACTGCTaGTGGCGGTCCAGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSEPSHC*WRSRVR
Trigger: ACGCACCCTGGACCGCCAGCAGCAGTGAGAAGGCTC...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGGGGCACGGCCAGGCCTaGAGGAGCGGCCGCACACAC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERGHGQA*RSGRTH
Trigger: GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCC...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGGGAGGGGCTGCAGGTaGTGTGAAGAAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLGRGCR*CEEEPS
Trigger: GCTGGGCTCTTCTTCACACCACCTGCAGCCCCTCCC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCTCCCCCGTGGAGGTaGAGTAGACAGATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPPPWR*SRQIPG
Trigger: TCCCGGGATCTGTCTACTCCACCTCCACGGGGGAGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCCAATGATGAAACGGTaGAGCCAGGAAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLPMMKR*SQEGAA
Trigger: CGCCGCCCCTTCCTGGCTTCACCGTTTCATCATTGG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGGCCCTTGGTGCCAATaGGGGAGTTGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLGPWCQ*GSCAAW
Trigger: CCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACCAGCCGCAGGGAAGATaGCACGTGCTCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHQPQGR*HVLQCC
Trigger: ACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTG...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCAGAGCGTGGGAAGCTaGCCATCACCCCGCCATACT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLQSVGS*PSPRHT
Trigger: AGTATGGCGGGGTGATGGTCAGCTTCCCACGCTCTG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGACGAAGTGGCGGTGGTaGTTGGGGTCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQTKWRW*LGSTSM
Trigger: CATGCTGGTGGACCCCAAGCACCACCGCCACTTCGT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCAGGGGACCCAGATGGTaGCTACCACCTTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLRGPRW*LPPCLQ
Trigger: CTGGAGGCAAGGTGGTAGGCACCATCTGGGTCCCCT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTCCCGCCCGCTGGTCCTaGCGCTGGCTTACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSPARWS*RWLTRP
Trigger: GGGGCGAGTAAGCCAGCGGCAGGACCAGCGGGCGGG...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCCAGCAGCTCTCGCTTaGCCTGCTGCACGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEPAALA*PAARPV
Trigger: CACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCGCAGCTTGGCAGGGATaGAGACCTCTACCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLAAWQG*RPLPRL
Trigger: TAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGC...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGAGTGGCGGTGGTGCTTaGGGTCCACCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLSGGGA*GPPAWS
Trigger: ACTCCATGCTGGTGGACCCCAAGCACCACCGCCACT...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCTGTGTGCCAGAGCGTaGGAAGCTGACCATCACCCC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLLCARA*EADHHP
Trigger: GGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCAGCAGTCCAGCCTTaGCCCGGTCCAAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLPAVQP*PGPNLQ
Trigger: CTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCTCTGGAAGGTGCCTTaGCCTCTTCGTGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLLWKVP*PLRVLG
Trigger: CCCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACAGGGGACCCAGATaGTGCCTACCACCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSHRGPR*CLPPCL
Trigger: GAGGCAAGGTGGTAGGCACCATCTGGGTCCCCTGTG...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAGCATCCAGCTTTCCTaGCACCATGATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLSIQLS*HHDGEA
Trigger: GGCCTCTCCATCATGGTGTCAGGAAAGCTGGATGCT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCTCGGCAGAGATaGGTAAGACTTCATGGCGAG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLPARQR*VRLHGE
Trigger: CTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCGACAGAGGAGACGGTaGAGCTATTGGCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLRQRRR*SYWPWH
Trigger: ATGCCAAGGCCAATAGCTTCACCGTCTCCTCTGTCG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR GCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCGCGTGCCTGTCTCCTaGATGATCTCGCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLRVPVS*MISPTS
Trigger: ACTGGTTGGCGAGATCATGCAGGAGACAGGCACGCG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCGCGTGCCTGTCTCCTaGATGATCTCGCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSRVPVS*MISPTS
Trigger: ACTGGTTGGCGAGATCATGCAGGAGACAGGCACGCG...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTTCTCCTCCGCCAGATaGAGGAGCTGCTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHFSSAR*RSCFLA
Trigger: GGCCAAGAAGCAGCTCCTGCATCTGGCGGAGGAGAA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGAGGGAAGATGACACGTaGTCCAGTGCTGTCGCGCAC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLREDDT*SSAVAH
Trigger: GTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCT...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCGGTGACAGGAACCAATaGCTCCAGAGCTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLGDRNQ*LQSFLG
Trigger: GCCAAGGAAGCTCTGGAGGCATTGGTTCCTGTCACC...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACGCGATGATGTCAGACTaGAGCTCAGGTGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHAMMSD*SSGAGT
Trigger: TGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGC...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAATCCTAGCCACGGCTaGGGAGCTCTCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLNPSHG*GALVMK
Trigger: CTTCATCACGAGAGCTCCGCAGCCGTGGCTAGGATT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCTAGACCGTGAAAACTaGCAGTCACCCGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLLDREN*QSPGTC
Trigger: GCAGGTCCCGGGTGACTGGCAGTTTTCACGGTCTAG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCGGGGTCATCTGGGCGTaGGATCTGGATTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLGVIWA*DLDFGC
Trigger: GCAACCAAAATCCAGATCCCACGCCCAGATGACCCC...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGCAGCTTGGCAGGGATaGAGACCTCTACCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLAAWQG*RPLPRL
Trigger: TAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGCAGTCCAGCCTTaGCCCGGTCCAAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPAVQP*PGPNLQ
Trigger: CTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGGCCTGCACAGCCGGATaGCCTGTGGGCGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPACTAG*PVGGVE
Trigger: TTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGC...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCTGCTCCTAGGGGCTaGCCTGCACAGCCGGATGGC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERPAPRG*PAQPDG
Trigger: GCCATCCGGCTGTGCAGGCCAGCCCCTAGGAGCAGG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCATCCAGCTTTCCTaGCACCATGATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHSIQLS*HHDGEA
Trigger: GGCCTCTCCATCATGGTGTCAGGAAAGCTGGATGCT...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCTGCTCGGCAGAGATaGGTAAGACTTCATGGCGAG +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPARQR*VRLHGE
Trigger: CTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCTCAGAGATGCTGTCTaGGGGTGGGATCTCAACGGA +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQLRDAV*GWDLNG
Trigger: TCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR TCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTTCCACGGGAAAGTaGATGTGGACCCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGPSTGK*MWTPPH
Trigger: GTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGG...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCACTGGCTCTGTACTGTaGACTGCGTTCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLTGSVL*TAFSSL
Trigger: CAGAGAGGAGAACGCAGTTCACAGTACAGAGCCAGT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCACAGTGGAGCAGGTCCTaGGCGGGCACGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIAQWSRS*AGTARP
Trigger: AGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTG...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAAAATCAGGACTGCCTaGGAACCCGTCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHKIRTA*EPVTLC
Trigger: GCAGAGGGTGACGGGTTCTCAGGCAGTCCTGATTTT...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTCACCAGACCTCAGGCTaGGGGTCTGGCAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAHQTSG*GSGSGG
Trigger: ACCTCCACTGCCAGACCCTCAGCCTGAGGTCTGGTG...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCACTGTCAGGAGGGATaGGCACGGACACCTTGTACT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQHCQEG*ARTPCT
Trigger: AGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGGTGACAGGAACCAATaGCTCCAGAGCTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLGDRNQ*LQSFLG
Trigger: GCCAAGGAAGCTCTGGAGGCATTGGTTCCTGTCACC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGAATCCTAGCCACGGCTaGGGAGCTCTCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLNPSHG*GALVMK
Trigger: CTTCATCACGAGAGCTCCGCAGCCGTGGCTAGGATT...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCAGGCCCATTCAGGGCTaGCTGAGCAAATGGGGACTT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLRPIQG*LSKWGL
Trigger: AAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp TGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAAGACACCAAGCCCGCCTaGCCGCCCACCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CQEPVQREDTASGGDAPQDTKPA*PPTLPG
Trigger: CCCAGGGAGGGTGGGCGGGCAGGCGGGCTTGGTGTC...TTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGGCATCCTTGTAGGTTaGAGGGTCGCTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQGILVG*RVALLF
Trigger: GAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGGTCATCTGGGCGTaGGATCTGGATTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLGVIWA*DLDFGC
Trigger: GCAACCAAAATCCAGATCCCACGCCCAGATGACCCC...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCAGCAGCTCTCGCTTaGCCTGCTGCACGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERPAALA*PAARPV
Trigger: CACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGGGAGTTGTGCAGCTTaGCAGGGATGGAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQGSCAA*QGWRPL
Trigger: TAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGATGACGAAGTGGCGGTaGTGCTTGGGGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEMTKWR*CLGSTS
Trigger: GCTGGTGGACCCCAAGCACCACCGCCACTTCGTCAT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCTGTGTGCCAGAGCGTaGGAAGCTGACCATCACCCC +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEELCARA*EADHHP
Trigger: GGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCTTCTCACTGCTGCTaGCGGTCCAGGGTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERPSHCC*RSRVRP
Trigger: GGGACGCACCCTGGACCGCCAGCAGCAGTGAGAAGG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCTGAGCCCCAAAGCTaGGAAATTCCTCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPEPQS*EIPQSC
Trigger: GCAGCTCTGAGGAATTTCCCAGCTTTGGGGCTCAGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCTGAGCCCCAAAGCTaGGAAATTCCTCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPEPQS*EIPQSC
Trigger: GCAGCTCTGAGGAATTTCCCAGCTTTGGGGCTCAGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTCCCGCCCACCCTCCCTaGGACCCAGGAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: DTASGGDAPQLASSFRRSPAHPP*DPGGQK
Trigger: CTTCTGCCCTCCTGGGTCCCAGGGAGGGTGGGCGGG...ACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACGCTTTCCTGACACCATaGTGGAGAGGCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHAFLTP*WRGLGL
Trigger: AAGACCAAGGCCTCTCCATCATGGTGTCAGGAAAGC...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCTTCCGAGCTTTCATaGCAGCATCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPSELS*QHPAFL
Trigger: CAGGAAAGCTGGATGCTGTCATGAAAGCTCGGAAGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCTTCCGAGCTTTCATaGCAGCATCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPSELS*QHPAFL
Trigger: CAGGAAAGCTGGATGCTGTCATGAAAGCTCGGAAGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGTGATCTTGATCTaGTTGCTGGGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPVILI*LLGSSG
Trigger: CCCAGATGACCCCAGCAATCAGATCAAGATCACTGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTCATAAATCTTCTTaGTGCGAGCCACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLPHKSS*CEPQPE
Trigger: CTCAGGCTGTGGCTCGCATCAAGAAGATTTATGAGG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTTGGCATCTGCTGAGTaGTTTTGGCCAGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQLASAE*FWPGSA
Trigger: GGCAGAACCTGGCCAAAATCACTCAGCAGATGCCAA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTGTCTTCGCCCTCTGTaGACTCGATGTGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLCLRPL*TRCEPL
Trigger: CAAAGGTTCACATCGAGTTCACAGAGGGCGAAGACA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTCAGAGCGTGGGAAGCTaGCCATCACCCCGCCATACT +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAQSVGS*PSPRHT
Trigger: AGTATGGCGGGGTGATGGTCAGCTTCCCACGCTCTG...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGGAGCCCCGTCACAGTaGCGCAGTTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ERTRLQEGMLPNSQAASDGAPSQ*RSWGLG
Trigger: CCCCAGACCCCAACTGCGTCACTGTGACGGGGCTCC...GTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGGCAGCTGGAGGAGGCTaGTTGCACTCCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEAAGGG*LHSTNR
Trigger: CCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGC...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCATTCAGGGCTGCCTaGGCAAATGGGGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGPFRAA*ANGDLP
Trigger: CGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGG...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGTGCCCAGGGCTGTCCTaGCAGCACAGACGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPCPGLS*QHRRFR
Trigger: CCTGAAGCGTCTGTGCTGTCAGGACAGCCCTGGGCA...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGTGGGTCCCCCTCGATaGGGATCAAATTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLVGPPR*GSNCSS
Trigger: AGAAGAGCAATTTGATCCGCATCGAGGGGGACCCAC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGTGGGTCCCCCTCGATaGGGATCAAATTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQVGPPR*GSNCSS
Trigger: AGAAGAGCAATTTGATCCGCATCGAGGGGGACCCAC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCGTGAAACTCTTGGTTTaGTTCTCCTCCGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLVKLLV*FSSARC
Trigger: GCATCTGGCGGAGGAGAAGCAAACCAAGAGTTTCAC...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCAATGCGTTTCTTGGCTaGCTCCACACAGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLNAFLG*LHTVLG
Trigger: GCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCATT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGACTGCAGCTCAGGTaGCGGGACATGTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHRLQLR*RDMYVH
Trigger: GTGAACATACATGTCCCGGCACCTGAGCTGCAGTCT...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACGGTTTCATGTATACCTaGAGCGCCTCACTGTCCACC +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHGFMYT*SASLST
Trigger: GGTGGACAGTGAGGCGCTGCAGGTATACATGAAACC...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTCCAGCTCCAGGAACCTaGCTCCTGCTGTCCATTGCC +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAPAPGT*LLLSIA
Trigger: GGCAATGGACAGCAGGAGGCAGGTTCCTGGAGCTGG...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCACTCCAGATGGGCCTaGTGGCCACTGACCCACCTG +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERHSRWA*WPLTHL
Trigger: CAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGAGTG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCGCGTGGTCTGCATTCTaGTCTACCTCATGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSAWSAF*STSCSR
Trigger: CCTAGAGCATGAGGTAGAGCAGAATGCAGACCACGC...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGCCGCCTCTGTCAGCCTaGCAGCTTTTGTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPPPLSA*QLLSWA
Trigger: GGCCCACGACAAAAGCTGGCAGGCTGACAGAGGCGG...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTCTGCTGCACGCCCTGTaGGTCCCCCTCGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSLLHAL*VPLDAD
Trigger: ATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAG...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCTGCGGATGACGAAGTaGCGGTGGTGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERLRMTK*RWCLGS
Trigger: GGACCCCAAGCACCACCGCCACTTCGTCATCCGCAG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCTGAATGCGTTTCTTaGCTGCCTCCACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPECVS*LPPHSP
Trigger: AGGACTGTGTGGAGGCAGCCAAGAAACGCATTCAGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGATGGTAATTTGGTCCTaGGGCTGGTTCCCATCGTCC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQMVIWS*GWFPSS
Trigger: GGACGATGGGAACCAGCCCCAGGACCAAATTACCAT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTGGGGCTCCGCTCTGTaGGAAGCGAATGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEWGSAL*EANVHL
Trigger: AAGGTGGACATTCGCTTCCCACAGAGCGGAGCCCCA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGTGTGCTGAGGCGCTCTaGCAGCTGGAGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGCAEAL*QLEEAD
Trigger: ATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACA...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGAGGGGCAGGGACCCTTaGTGCTTTCAGACCCCACGG +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPRGRDP*CFQTPR
Trigger: CCGTGGGGTCTGAAAGCACCAAGGGTCCCTGCCCCT...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCACAGGGGACCCAGATaGTGCCTACCACCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGHRGPR*CLPPCL
Trigger: GAGGCAAGGTGGTAGGCACCATCTGGGTCCCCTGTG...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGGGGAGGGGCTGCAGGTaGTGTGAAGAAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERGRGCR*CEEEPS
Trigger: GCTGGGCTCTTCTTCACACCACCTGCAGCCCCTCCC...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGTTCCTTCTCTCCAGTaGAGACAATCTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQVPSLQ*RQSLSG
Trigger: ACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAAC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGACCTTTGGCATCTGCTaGGTGATTTTGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQTFGIC*VILARF
Trigger: GAACCTGGCCAAAATCACTCAGCAGATGCCAAAGGT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCACCTTTGGCATCTGCTaGGTGATTTTGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLTFGIC*VILARF
Trigger: GAACCTGGCCAAAATCACTCAGCAGATGCCAAAGGT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTGTCTTCGCCCTCTGTaGACTCGATGTGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQCLRPL*TRCEPL
Trigger: CAAAGGTTCACATCGAGTTCACAGAGGGCGAAGACA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCACTTGTGGTCGATGTTaGTCTCCACATAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLTCGRC*SPHSPS
Trigger: GGATGGACTATGTGGAGATCAACATCGACCACAAGT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTTGGCCAGGTCTTTCTaGATAGACAGAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLLARSF*IDRILL
Trigger: GAGCAGGATTCTGTCTATTCAGAAAGACCTGGCCAA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCCGCCGCACTCCTCCATaGTGGAGCGGATCAGACGGC +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLRRTPP*WSGSDG
Trigger: GCCGTCTGATCCGCTCCATCATGGAGGAGTGCGGCG...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCGCGGATGTCAACAGTaGAACTCTTGGTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLRGCQQ*NSWFAS
Trigger: AGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTCCTCAATGATCTCCTaGATGCGTTTCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQSSMIS*MRFLAA
Trigger: GGCAGCCAAGAAACGCATTCAGGAGATCATTGAGGA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGTGCCGCGGGCACCAATaGTGCGGGCGTGAACGCGGT +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLCRGHQ*CGRERG
Trigger: ACCGCGTTCACGCCCGCATCATTGGTGCCCGCGGCA...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCATTCCTCCTCCAGATTaGGGATGTGGTCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLIPPPD*GCGRWL
Trigger: AAGCCATCGACCACATCCTCAATCTGGAGGAGGAAT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCTCTCGCTTGGCCTGCTaGACGCCCTGTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLSRLAC*TPCGSP
Trigger: GGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGA...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCATCTCGCTTGGCCTGCTaGACGCCCTGTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAASRLAC*TPCGSP
Trigger: GGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGA...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGACGAAGTGGCGGTGGTaGTTGGGGTCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERTKWRW*LGSTSM
Trigger: CATGCTGGTGGACCCCAAGCACCACCGCCACTTCGT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACCTCTGTACTGTGAACTaGGTTCTCCTCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHLCTVN*VLLSVW
Trigger: CCAGACAGAGAGGAGAACGCAGTTCACAGTACAGAG...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGAAAGCCCGGTCCTCCTaGTCGGCCTGTAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERKARSS*SACSSF
Trigger: GAAGGAGCTACAGGCCGAGCAGGAGGACCGGGCTTT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTTGGGGTGGCACTAACTaGACAGAGACCACTCCACGC +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAWGGTN*TETTPR
Trigger: GCGTGGAGTGGTCTCTGTGCAGTTAGTGCCACCCCA...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTCACTCCAGATGGGCCTaGTGGCCACTGACCCACCTG +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSHSRWA*WPLTHL
Trigger: CAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGAGTG...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGGCTCCAGCGGGTTCCTaGGCACTTTCCAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERAPAGS*ALSRQA
Trigger: TGCTTGCCTGGAAAGTGCCCAGGAACCCGCTGGAGC...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCAGAGGCCTTGGTCTTTaGCCAAAGACAGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLRGLGL*PKTAPS
Trigger: ACTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGATTGCTGGGGTCATCTaGGCGTGGGATCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLIAGVI*AWDLDF
Trigger: AAAATCCAGATCCCACGCCCAGATGACCCCAGCAAT...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAATGAGGTGCCTGTaGAACTTGTGGTCGATGTTG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPMRCL*NLWSML
Trigger: CAACATCGACCACAAGTTCCACAGGCACCTCATTGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCAATGAGGTGCCTGTaGAACTTGTGGTCGATGTTG +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPMRCL*NLWSML
Trigger: CAACATCGACCACAAGTTCCACAGGCACCTCATTGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGGGGAGTTGTGCAGCTTaGCAGGGATGGAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEGSCAA*QGWRPL
Trigger: TAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCC...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTGGGGTCCACCAGCATaGAGTCTTCCACCACATTAT +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHWGPPA*SLPPHY
Trigger: ATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGAGTGGCGGTGGTGCTTaGGGTCCACCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERSGGGA*GPPAWS
Trigger: ACTCCATGCTGGTGGACCCCAAGCACCACCGCCACT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCATTTGGTCCTGGGGCTaGTTCCCATCGTCCTTATCA +
Preference number: 4 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSIWSWG*FPSSLS
Trigger: TGATAAGGACGATGGGAACCAGCCCCAGGACCAAAT...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGAAACCATTGTGTGGTTaGGTTTGGGTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQKPLCG*VWVSRL
Trigger: CAGCCTGCTGACCCAAACCCAACCACACAATGGTTT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGAAACCATTGTGTGGTTaGGTTTGGGTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLKPLCG*VWVSRL
Trigger: CAGCCTGCTGACCCAAACCCAACCACACAATGGTTT...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCATGCCAGCTTTTGTCGTaGGCCCCCGCCCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAACQLLS*APARWS
Trigger: GGACCAGCGGGCGGGGGCCCACGACAAAAGCTGGCA...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTTAGAGTGGCAACTTTaGTTTGTTGCGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHLEWQL*FVAEPA
Trigger: GGCTGGTTCCGCAACAAATCAAAGTTGCCACTCTAA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCACCAGTTCTCTGCATaGTCTCAAGGCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLHQFSA*SQGRFL
Trigger: CAAAAATCTGCCTTGAGATCATGCAGAGAACTGGTG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGGCTTTCCTGACACCATaGTGGAGAGGCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEAFLTP*WRGLGL
Trigger: AAGACCAAGGCCTCTCCATCATGGTGTCAGGAAAGC...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGACTTGTGGTCGATGTTaGTCTCCACATAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQTCGRC*SPHSPS
Trigger: GGATGGACTATGTGGAGATCAACATCGACCACAAGT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGTTGGCCAGGTCTTTCTaGATAGACAGAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLLARSF*IDRILL
Trigger: GAGCAGGATTCTGTCTATTCAGAAAGACCTGGCCAA...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTTGGCCAGGTCTTTCTaGATAGACAGAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHLARSF*IDRILL
Trigger: GAGCAGGATTCTGTCTATTCAGAAAGACCTGGCCAA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGCGGATGTCAACAGTaGAACTCTTGGTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLRGCQQ*NSWFAS
Trigger: AGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCGCGGATGTCAACAGTaGAACTCTTGGTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLRGCQQ*NSWFAS
Trigger: AGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCGCGGATGTCAACAGTaGAACTCTTGGTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSRGCQQ*NSWFAS
Trigger: AGAAGCAAACCAAGAGTTTCACTGTTGACATCCGCG...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCTTCCAGGTCCTCAATaGTCTCCTGAATGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQLPGPQ*SPECVS
Trigger: AGAAACGCATTCAGGAGATCATTGAGGACCTGGAAG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCATTCTAATGTCACCTaGGCTTCCAGGTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQHSNVT*ASRSSM
Trigger: CATTGAGGACCTGGAAGCTCAGGTGACATTAGAATG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGAACCTTTGGGGCCCATaGCAGATCGATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLNLWGP*QIDGIS
Trigger: AGAAATTCCATCGATCTGTCATGGGCCCCAAAGGTT...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAACCTTTGGGGCCCATaGCAGATCGATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHNLWGP*QIDGIS
Trigger: AGAAATTCCATCGATCTGTCATGGGCCCCAAAGGTT...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCAGTGGAGCAGGTCCTaGGCGGGCACGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTQWSRS*AGTARP
Trigger: AGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGTACGCTCATTTTCCATaGGAGATGCAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLYAHFP*EMQAPA
Trigger: TGCTGGAGCTTGCATCTCGCATGGAAAATGAGCGTA...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTGCCAGATGCAGGAGCTaGTTCTTGGCCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAARCRS*FLAFST
Trigger: TGTGGAGAAGGCCAAGAAGCAGCTCCTGCATCTGGC...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGTTCTCCTCCGCCAGATaGAGGAGCTGCTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPFSSAR*RSCFLA
Trigger: GGCCAAGAAGCAGCTCCTGCATCTGGCGGAGGAGAA...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTACGAAGTGGCGGTGGTaGTTGGGGTCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSTKWRW*LGSTSM
Trigger: CATGCTGGTGGACCCCAAGCACCACCGCCACTTCGT...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCACTCATCCATCATCTTaGGGATCCCACTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLTHPSS*GSHFLS
Trigger: AGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACCGCACGCCTCACCCCTaGCTCATCTCTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDRTPHP*LISAQG
Trigger: GCCCTGGGCAGAGATGAGGCAGGGGTGAGGCGTGCG...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCTGCAACGGAACTCATaGTTGATCTCACACCTACAC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQLQRNS*LISHLH
Trigger: GTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCTCCAGCGGGTTCCTaGGCACTTTCCAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSAPAGS*ALSRQA
Trigger: TGCTTGCCTGGAAAGTGCCCAGGAACCCGCTGGAGC...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCAGCGATGAAGGGGTaGAATGCCTTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPAMKG*NAFSTS
Trigger: AGAAGTAGAAAAGGCATTCCACCCCTTCATCGCTGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGCGATGAAGGGGTaGAATGCCTTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPAMKG*NAFSTS
Trigger: AGAAGTAGAAAAGGCATTCCACCCCTTCATCGCTGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGAATTTGTGGTATTCTaGCTTGGCGCGGATGTCAAC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLEFVVF*LGADVN
Trigger: GTTGACATCCGCGCCAAGCCAGAATACCACAAATTC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGATCTCCCGCAAGACCTaGCCTCTGCGGATGACGAAG +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPISRKT*PLRMTK
Trigger: CTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGAT...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCTGCTCATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCCTTCTCACTGCTGCTaGCGGTCCAGGGTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: AAHVRSLCRERTRLQEGMPSHCC*RSRVRP
Trigger: GGGACGCACCCTGGACCGCCAGCAGCAGTGAGAAGG...CATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACATGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGGGGCACGGCCAGGCCTaGAGGAGCGGCCGCACACAC +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGGHGQA*RSGRTH
Trigger: GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCC...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGTCAGGGAGACAGGCCTaGGGACAGTCATGTCATCAC +
Preference number: 4 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGSGRQA*GQSCHH
Trigger: GTGATGACATGACTGTCCCCAGGCCTGTCTCCCTGA...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGGGTACATGGAACACCTaGGTGATGACAGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEGTWNT*VMTEAL
Trigger: CAAGGCTTCTGTCATCACTCAGGTGTTCCATGTACC...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCACCAGTTCTCTGCATaGTCTCAAGGCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQHQFSA*SQGRFL
Trigger: CAAAAATCTGCCTTGAGATCATGCAGAGAACTGGTG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTCCAGTGATCTTGATCTaGTTGCTGGGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAPVILI*LLGSSG
Trigger: CCCAGATGACCCCAGCAATCAGATCAAGATCACTGG...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTTATACGGCCCAGCGATaGAGGGGTGGAATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAYTAQR*RGGMPF
Trigger: AAAAGGCATTCCACCCCTTCATCGCTGGGCCGTATA...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGTGCCTGTCTCCTGCATaGTCTCGCCAACCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGCLSPA*SRQPVY
Trigger: ATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCA...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGGTTCCTTCTCTCCAGTaGAGACAATCTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEVPSLQ*RQSLSG
Trigger: ACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAAC...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCCTCATAAATCTTCTTaGTGCGAGCCACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEPHKSS*CEPQPE
Trigger: CTCAGGCTGTGGCTCGCATCAAGAAGATTTATGAGG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTGCCCTTGGGCCCAATaGCATACTTGTGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEECPWAQ*HTCVGI
Trigger: AATCCCAACACAAGTATGTCATTGGGCCCAAGGGCA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCACCCTTCTGCCCAATaGTTGTGCGATGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLHPSAQ*LCDEIF
Trigger: AAAGATTTCATCGCACAATCATTGGGCAGAAGGGTG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGAACGGTGTCGCTTCCTaGACCTTCCACGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPNGVAS*TFHGKV
Trigger: CACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTT...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCACAGCCGCAGGGAAGATaGCACGTGCTCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIAQPQGR*HVLQCC
Trigger: ACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTG...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGGGTTCTGTTCTTTTTaGTCATTATCGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQGFCSF*SLSFGA
Trigger: GGCCCCAAACGATAATGATCAAAAAGAACAGAACCC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCTGACCCACCTGTGCTaGGGGAGAGCGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTLTHLC*GRAPAS
Trigger: GGAGGCTGGCGCTCTCCCTCAGCACAGGTGGGTCAG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCCCATTCAGGGCTGCCTaGGCAAATGGGGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLPFRAA*ANGDLP
Trigger: CGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGG...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCGCAGAAGCCCGCATCTaGCCTTCTCACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VQREDTASGGDAPQLASSAEARI*PSHCCW
Trigger: CCAGCAGCAGTGAGAAGGTCAGATGCGGGCTTCTGC...GCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR GCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGATTTTGGCCAGGTTCTaGCCTTTCTTGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQILARF*PFLPMM
Trigger: CATCATTGGCAAGAAAGGGCAGAACCTGGCCAAAAT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGCACTGTCAGGAGGGATaGGCACGGACACCTTGTACT +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPHCQEG*ARTPCT
Trigger: AGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTG...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACAGCTCTCGCTTGGCCTaGTGCACGCCCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDSSRLA*CTPCGS
Trigger: GGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCT...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGATTTTCCATGCGAGATaGAAGCTCCAGCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEIFHAR*KLQQLS
Trigger: CGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAAT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCTCTGTACTGTGAACTaGGTTCTCCTCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEELCTVN*VLLSVW
Trigger: CCAGACAGAGAGGAGAACGCAGTTCACAGTACAGAG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGGAGCCTTCTCACTGCTaGTGGCGGTCCAGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLEPSHC*WRSRVR
Trigger: ACGCACCCTGGACCGCCAGCAGCAGTGAGAAGGCTC...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGTGGGCGGGGTGGAAGTaGCCACTCCCACTCCAGATG +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLWAGWK*PLPLQM
Trigger: CATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCA...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTCAGCAAAACTCTCTTaGGTCAAAACTGCAACGGAA +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLSAKLS*VKTATE
Trigger: TTCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGGGCATCCTTGTAGGTTaGAGGGTCGCTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPGILVG*RVALLF
Trigger: GAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCC...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGATGATGGAGAGGCCTTaGTCTTTGGCCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEMMERP*SLAKDS
Trigger: GCTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCAT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGTCTGGGCGTGGGATCTaGATTTTGGTTGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLSGRGI*ILVAVF
Trigger: AAAAACTGCAACCAAAATCCAGATCCCACGCCCAGA...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTCTGGGCGTGGGATCTaGATTTTGGTTGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLSGRGI*ILVAVF
Trigger: AAAAACTGCAACCAAAATCCAGATCCCACGCCCAGA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGATTGCTGGGGTCATCTaGGCGTGGGATCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEIAGVI*AWDLDF
Trigger: AAAATCCAGATCCCACGCCCAGATGACCCCAGCAAT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCTGGAAGGTCGATTTTaGTGTTGCTTTCTTCACGAA +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLLEGRF*CCFLHE
Trigger: TTCGTGAAGAAAGCAACACCAAAATCGACCTTCCAG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGATGGTGATCAGGTCCTaGTCCTTGTCCTCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERMVIRS*SLSSAA
Trigger: TGCGGCTGAGGACAAGGACCAGGACCTGATCACCAT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCAGTGGCGGTGGTGCTTaGGGTCCACCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLSGGGA*GPPAWS
Trigger: ACTCCATGCTGGTGGACCCCAAGCACCACCGCCACT...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGCTGCGGATGACGAAGTaGCGGTGGTGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLLRMTK*RWCLGS
Trigger: GGACCCCAAGCACCACCGCCACTTCGTCATCCGCAG...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCCCATGACAGATCGATaGAATTTCTGGGGTATAGCA +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLPMTDR*NFWGIA
Trigger: TGCTATACCCCAGAAATTCCATCGATCTGTCATGGG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTCCCGAGTAATCTGCTaGATTCTGGAACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEESRVIC*ILEPLG
Trigger: CCCCAAAGGTTCCAGAATCCAGCAGATTACTCGGGA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTGCCACCCTCTGGAAGGTGCCTTaGCCTCTTCGTGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LQEGMLPNSQAASDAVATLWKVP*PLRVLG
Trigger: CCCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAG...GGTGGCAACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGTGGACCAAGGGAAACTaGCAGGAGGGAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPWTKGN*QEGGGK
Trigger: TTTCCCACCTCCCTCCTGCCAGTTTCCCTTGGTCCA...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCATGTGCTGAGGCGCTCTaGCAGCTGGAGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIACAEAL*QLEEAD
Trigger: ATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACA...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCTCCAGATGGGCCTGCTaGCCACTGACCCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLSRWAC*PLTHLC
Trigger: GCACAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGA...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTGCCTGTCTCCTGCATaGTCTCGCCAACCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERCLSPA*SRQPVY
Trigger: ATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTTGGCATCTGCTGAGTaGTTTTGGCCAGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERLASAE*FWPGSA
Trigger: GGCAGAACCTGGCCAAAATCACTCAGCAGATGCCAA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTTGTCTTCGCCCTCTGTaGACTCGATGTGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPACLRPL*TRCEPL
Trigger: CAAAGGTTCACATCGAGTTCACAGAGGGCGAAGACA...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCTTGTACTGGTCTTTaGTTCTGTTTATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQPCTGL*FCLCWH
Trigger: GTGCCAACATAAACAGAATCAAAGACCAGTACAAGG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCCTTGTACTGGTCTTTaGTTCTGTTTATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLPCTGL*FCLCWH
Trigger: GTGCCAACATAAACAGAATCAAAGACCAGTACAAGG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACCGCCTCCTTTCCCAATaGTATTCTTGTGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHRLLSQ*YSCETV
Trigger: AACAGTTTCACAAGAATATCATTGGGAAAGGAGGCG...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGATGATAATGGTCTCTaGATTGCTATTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLDDNGL*IAILCW
Trigger: CCAGCAGAGAATAGCAATTCAGAGACCATTATCATC...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACGATGATAATGGTCTCTaGATTGCTATTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHDDNGL*IAILCW
Trigger: CCAGCAGAGAATAGCAATTCAGAGACCATTATCATC...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGATGATAATGGTCTCTaGATTGCTATTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLDDNGL*IAILCW
Trigger: CCAGCAGAGAATAGCAATTCAGAGACCATTATCATC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGGGAGCCCCGTCACAGTaGCGCAGTTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGGAPSQ*RSWGLG
Trigger: CCCCAGACCCCAACTGCGTCACTGTGACGGGGCTCC...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACCACCAGACCTCAGGCTaGGGGTCTGGCAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDHQTSG*GSGSGG
Trigger: ACCTCCACTGCCAGACCCTCAGCCTGAGGTCTGGTG...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGCTGACCCACCTGTGCTaGGGGAGAGCGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRLTHLC*GRAPAS
Trigger: GGAGGCTGGCGCTCTCCCTCAGCACAGGTGGGTCAG...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTGGTCACCCTAGCCTATaGAGCTGGAAGCTATATTCC +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAGHPSL*SWKLYS
Trigger: GGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACC...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAGCTATGGAAACAGATaGTATGGAAGACATCCAACA +
Preference number: 4 (lower is better)
Translates to: RARPGLEERPHTQPGARLSYGNR*YGRHPT
Trigger: TGTTGGATGTCTTCCATATCATCTGTTTCCATAGCT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGAAATCCCGAGTAATCTaGTGGATTCTGGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQKSRVI*WILEPL
Trigger: CAAAGGTTCCAGAATCCAGCAGATTACTCGGGATTT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAAATCCCGAGTAATCTaGTGGATTCTGGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHKSRVI*WILEPL
Trigger: CAAAGGTTCCAGAATCCAGCAGATTACTCGGGATTT...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGAGACTGCAGCTCAGGTaGCGGGACATGTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPRLQLR*RDMYVH
Trigger: GTGAACATACATGTCCCGGCACCTGAGCTGCAGTCT...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCGATTTGGGTAATTACTaGCCCCTTTCTCCCGATAAT +
Preference number: 4 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSDLGNY*PLSPDN
Trigger: ATTATCGGGAGAAAGGGGGCAGTAATTACCCAAATC...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGTCCTCAGAAACCATCTaGTCAAGTTCACCCACAATT +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLSSETI*SSSPTI
Trigger: AATTGTGGGTGAACTTGAGCAGATGGTTTCTGAGGA...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCTGGAGGAGGCTGATTaGACTCCACAAACAGGACTG +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERLEEAD*TPQTGL
Trigger: CAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGCTGGAGGAGGCTGATTaGACTCCACAAACAGGACTG +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPLEEAD*TPQTGL
Trigger: CAGTCCTGTTTGTGGAGTGCAATCAGCCTCCTCCAG...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGCCAGCTCCAGGAACCTaGCTCCTGCTGTCCATTGCC +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLPAPGT*LLLSIA
Trigger: GGCAATGGACAGCAGGAGGCAGGTTCCTGGAGCTGG...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCATGGTGCCTACCACCTTaGCTCCAGGCTCCACTCACC +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAWCLPP*LQAPLT
Trigger: GGTGAGTGGAGCCTGGAGGCAAGGTGGTAGGCACCA...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTCAGCAAAACTCTCTTaGGTCAAAACTGCAACGGAA +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHSAKLS*VKTATE
Trigger: TTCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCCAATAACAAAGCGATaGTGTTCTTTGGGAATGGCA +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLPITKR*CSLGMA
Trigger: TGCCATTCCCAAAGAACACCATCGCTTTGTTATTGG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGGGGTCATCTGGGCGTaGGATCTGGATTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSGVIWA*DLDFGC
Trigger: GCAACCAAAATCCAGATCCCACGCCCAGATGACCCC...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCCAGCAGCTCTCGCTTaGCCTGCTGCACGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTPAALA*PAARPV
Trigger: CACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACCTGGAAGGTCGATTTTaGTGTTGCTTTCTTCACGAA +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHLEGRF*CCFLHE
Trigger: TTCGTGAAGAAAGCAACACCAAAATCGACCTTCCAG...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAATGACGAAGTGGCGGTaGTGCTTGGGGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAMTKWR*CLGSTS
Trigger: GCTGGTGGACCCCAAGCACCACCGCCACTTCGTCAT...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGATTCTCCTGGACAACTaGCTCTGTACTGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEILLDN*LCTVNC
Trigger: GCAGTTCACAGTACAGAGCCAGTTGTCCAGGAGAAT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTGCCACCTGGGGCTCCGCTCTGTaGGAAGCGAATGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: LQEGMLPNSQAASDAVATWGSAL*EANVHL
Trigger: AAGGTGGACATTCGCTTCCCACAGAGCGGAGCCCCA...GGTGGCAACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCCTTCTCACTGCTGCTaGCGGTCCAGGGTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTPSHCC*RSRVRP
Trigger: GGGACGCACCCTGGACCGCCAGCAGCAGTGAGAAGG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGTTGATCATTATCGTTTaGGGCCCCAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGLIIIV*GPKGGS
Trigger: AGACCCTCCCTTGGGGCCCCAAACGATAATGATCAA...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGGGCCTGTGGGCGGGGTaGAAGTGCCCACTCCCACTC +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGGLWAG*KCPLPL
Trigger: GAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCC...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTGGCCTGTGGGCGGGGTaGAAGTGCCCACTCCCACTC +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRGLWAG*KCPLPL
Trigger: GAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCC...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGTTAAGGCCAAGGGATaGATTGTAGCTATGGAAACA +
Preference number: 4 (lower is better)
Translates to: GAGPERARPGLEERPHTQVKAKG*IVAMET
Trigger: TGTTTCCATAGCTACAATCCATCCCTTGGCCTTAAC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGTGGGCCCCCGCCCGCTaGTCCTGCCGCTGGCTTACT +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVWAPAR*SCRWLT
Trigger: AGTAAGCCAGCGGCAGGACCAGCGGGCGGGGGCCCA...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACCAGAAGGTCCGTCCTaGGGCCGCCTCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAPEGPS*GRLCQP
Trigger: AGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCTCATAAATCTTCTTaGTGCGAGCCACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERPHKSS*CEPQPE
Trigger: CTCAGGCTGTGGCTCGCATCAAGAAGATTTATGAGG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGACCTTTGGCATCTGCTaGGTGATTTTGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERTFGIC*VILARF
Trigger: GAACCTGGCCAAAATCACTCAGCAGATGCCAAAGGT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGAAATCTTTGCTCAATaGTTAGATCCTTGGTACGCT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLEIFAQ*LDPWYA
Trigger: AGCGTACCAAGGATCTAATCATTGAGCAAAGATTTC...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCACCCTTCTGCCCAATaGTTGTGCGATGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEHPSAQ*LCDEIF
Trigger: AAAGATTTCATCGCACAATCATTGGGCAGAAGGGTG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGATCGGAACAGAAATTaGATAGCTATTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLDRNRN*IAIFHQ
Trigger: CTGGTGGAAAATAGCTATTCAATTTCTGTTCCGATC...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACGATCGGAACAGAAATTaGATAGCTATTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHDRNRN*IAIFHQ
Trigger: CTGGTGGAAAATAGCTATTCAATTTCTGTTCCGATC...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACGGCCCTTGGTGCCAATaGGGGAGTTGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDGPWCQ*GSCAAW
Trigger: CCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCC...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGTCCTCAATGATCTCCTaGATGCGTTTCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPSSMIS*MRFLAA
Trigger: GGCAGCCAAGAAACGCATTCAGGAGATCATTGAGGA...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTCCTCAATGATCTCCTaGATGCGTTTCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERSSMIS*MRFLAA
Trigger: GGCAGCCAAGAAACGCATTCAGGAGATCATTGAGGA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCACGACAGAGGAGACGGTaGAGCTATTGGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIARQRRR*SYWPSP
Trigger: AGGAGAAGGCCAATAGCTTCACCGTCTCCTCTGTCG...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427183.6
CDS-3UTR GCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCTTCTCCTCCGCCAGATaGAGGAGCTGCTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLFSSAR*RSCFLA
Trigger: GGCCAAGAAGCAGCTCCTGCATCTGGCGGAGGAGAA...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGGGCCCGGTCCAAATTTaGAGCGAGGCCCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTGPVQI*SEARDG
Trigger: GCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCC...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGGAGCCTTCTCACTGCTaGTGGCGGTCCAGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTEPSHC*WRSRVR
Trigger: ACGCACCCTGGACCGCCAGCAGCAGTGAGAAGGCTC...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp AGAGCTGCTCATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGAGCTTCCGACGCAGTTaGCACCCTCAGGACACCAAG +
Preference number: 4 (lower is better)
Translates to: RAAHVRSLCRERTRLQEGSFRRS*HPQDTK
Trigger: CTTGGTGTCCTGAGGGTGGCAACTGCGTCGGAAGCT...CCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACATGAGCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR GCA 90 bp CATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCCATGTCAGGAGCCTGTaGAGAGAGAGGACACGGCTT +
Preference number: 4 (lower is better)
Translates to: HVRSLCRERTRLQEGMLPHVRSL*RERTRL
Trigger: AAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACATG...GGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCAGGCATCCTTGTAGGTTaGAGGGTCGCTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIAGILVG*RVALLF
Trigger: GAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCC...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGATTGCTGGGGTCATCTaGGCGTGGGATCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPIAGVI*AWDLDF
Trigger: AAAATCCAGATCCCACGCCCAGATGACCCCAGCAAT...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGATCTCCCGCAAGACCTaGCCTCTGCGGATGACGAAG +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLISRKT*PLRMTK
Trigger: CTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGAT...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCCCATGACAGATCGATaGAATTTCTGGGGTATAGCA +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEPMTDR*NFWGIA
Trigger: TGCTATACCCCAGAAATTCCATCGATCTGTCATGGG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTCCCGAGTAATCTGCTaGATTCTGGAACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERSRVIC*ILEPLG
Trigger: CCCCAAAGGTTCCAGAATCCAGCAGATTACTCGGGA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGTGGGGCTCCGCTCTGTaGGAAGCGAATGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLWGSAL*EANVHL
Trigger: AAGGTGGACATTCGCTTCCCACAGAGCGGAGCCCCA...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCTTCCTCCACATTCTCTaGGAGCCCCGTCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLFLHIL*EPRHSD
Trigger: GTCACTGTGACGGGGCTCCCAGAGAATGTGGAGGAA...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTGCCACCTTCCTCCACATTCTCTaGGAGCCCCGTCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: LQEGMLPNSQAASDAVATFLHIL*EPRHSD
Trigger: GTCACTGTGACGGGGCTCCCAGAGAATGTGGAGGAA...GGTGGCAACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCACCTGAGCCCCAAAGCTaGGAAATTCCTCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIAPEPQS*EIPQSC
Trigger: GCAGCTCTGAGGAATTTCCCAGCTTTGGGGCTCAGG...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCACTCCCACTCCAGATaGGCCTGCTGGCCACTGACC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTHSHSR*ACWPLT
Trigger: GGTCAGTGGCCAGCAGGCCCATCTGGAGTGGGAGTG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCATCAGGGAGACAGGCCTaGGGACAGTCATGTCATCAC +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIASGRQA*GQSCHH
Trigger: GTGATGACATGACTGTCCCCAGGCCTGTCTCCCTGA...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGTTAGAGTGGCAACTTTaGTTTGTTGCGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPLEWQL*FVAEPA
Trigger: GGCTGGTTCCGCAACAAATCAAAGTTGCCACTCTAA...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCCCTGCTCGGCAGAGATaGGTAAGACTTCATGGCGAG +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLPARQR*VRLHGE
Trigger: CTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGG...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCTATACGGCCCAGCGATaGAGGGGTGGAATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLYTAQR*RGGMPF
Trigger: AAAAGGCATTCCACCCCTTCATCGCTGGGCCGTATA...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGTGCCGCGGGCACCAATaGTGCGGGCGTGAACGCGGT +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKCRGHQ*CGRERG
Trigger: ACCGCGTTCACGCCCGCATCATTGGTGCCCGCGGCA...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGGGAGCCCCGTCACAGTaGCGCAGTTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKGAPSQ*RSWGLG
Trigger: CCCCAGACCCCAACTGCGTCACTGTGACGGGGCTCC...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGTGCCCAGGGCTGTCCTaGCAGCACAGACGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGCPGLS*QHRRFR
Trigger: CCTGAAGCGTCTGTGCTGTCAGGACAGCCCTGGGCA...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGTTTAGCTCCAAGTCTTaGAGTTTCTCTCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLFSSKS*SFSPFL
Trigger: CAAAAATGGAGAGAAACTGCAAGACTTGGAGCTAAA...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTTTCTTCACTTCCACTaGAATGGTTGTAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLFLHFH*NGCSLL
Trigger: AAGAAGACTACAACCATTGCAGTGGAAGTGAAGAAA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR GCA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTATTTTGGCCAGGTTCTaGCCTTTCTTGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAILARF*PFLPMM
Trigger: CATCATTGGCAAGAAAGGGCAGAACCTGGCCAAAAT...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTATTTTCCATGCGAGATaGAAGCTCCAGCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSIFHAR*KLQQLS
Trigger: CGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAAT...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCGGTTTCATGTATACCTaGAGCGCCTCACTGTCCACC +
Preference number: 4 (lower is better)
Translates to: HVRSLCRERTRLQEGMLPGFMYT*SASLST
Trigger: GGTGGACAGTGAGGCGCTGCAGGTATACATGAAACC...GGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR GCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGTTGCCAGGTCTTCCTTaGACCCTGACACCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLLPGLP*TLTPVL
Trigger: CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAA...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAGGCAGGGACCCTTGGTaGTTTCAGACCCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAGRDPW*FQTPRQ
Trigger: CTGCCGTGGGGTCTGAAAGCACCAAGGGTCCCTGCC...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCACCTCCCCCAACCTGTaGGCATCTCAATCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLTSPNL*ASQSQQ
Trigger: CTGCTGTGATTGAGATGCGCACAGGTTGGGGGAGGT...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGTGGGCGGGGTGGAAGTaGCCACTCCCACTCCAGATG +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRWAGWK*PLPLQM
Trigger: CATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCA...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGCGCACGCCTCACCCCTaGCTCATCTCTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKRTPHP*LISAQG
Trigger: GCCCTGGGCAGAGATGAGGCAGGGGTGAGGCGTGCG...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGAGCGATGGTGTTCTTTaGGAATGGCAACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERSDGVL*EWQQLL
Trigger: CAGCAACTGTTGCCATTCCCAAAGAACACCATCGCT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCCAATAACAAAGCGATaGTGTTCTTTGGGAATGGCA +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEPITKR*CSLGMA
Trigger: TGCCATTCCCAAAGAACACCATCGCTTTGTTATTGG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTGCCTGTGGAACTTGTaGTCGATGTTGATCTCCACA +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERCLWNL*SMLIST
Trigger: TGTGGAGATCAACATCGACCACAAGTTCCACAGGCA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGTTAATGATGACCTCTaGGAATTTGTCACGAATTTC +
Preference number: 4 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLVNDDL*EFVTNF
Trigger: GAAATTCGTGACAAATTCCCAGAGGTCATCATTAAC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGTTAATGATGACCTCTaGGAATTTGTCACGAATTTC +
Preference number: 4 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLVNDDL*EFVTNF
Trigger: GAAATTCGTGACAAATTCCCAGAGGTCATCATTAAC...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGACATTATCCAGGTTTTaGATCAAGGCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERTLSRF*IKASSS
Trigger: GGAGCTGGAGGCCTTGATCCAAAACCTGGATAATGT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTCTGCGGATGACGAAGTaGCGGTGGTGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPLRMTK*RWCLGS
Trigger: GGACCCCAAGCACCACCGCCACTTCGTCATCCGCAG...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTGCTCCAACCGGATTTaGGTAATTACTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERCSNRI*VITAPF
Trigger: AAAGGGGGCAGTAATTACCCAAATCCGGTTGGAGCA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACACCTTCTCACTGCTGCTaGCGGTCCAGGGTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTPSHCC*RSRVRP
Trigger: GGGACGCACCCTGGACCGCCAGCAGCAGTGAGAAGG...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCCCTGAGCCCCAAAGCTaGGAAATTCCTCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLPEPQS*EIPQSC
Trigger: GCAGCTCTGAGGAATTTCCCAGCTTTGGGGCTCAGG...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp TGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACCTGAGCCCCAAAGCTaGGAAATTCCTCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CQEPVQREDTASGGDAPQPEPQS*EIPQSC
Trigger: GCAGCTCTGAGGAATTTCCCAGCTTTGGGGCTCAGG...TTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGGGCACGGCCAGGCCTaGAGGAGCGGCCGCACACAC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEGHGQA*RSGRTH
Trigger: GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTTCCAGATGGGCCTGCTaGCCACTGACCCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRSRWAC*PLTHLC
Trigger: GCACAGGTGGGTCAGTGGCCAGCAGGCCCATCTGGA...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCGGCATCCAGCGGCGTaGTCTGCATTCTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTRHPAA*SAFCST
Trigger: GGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGCCTCCCCCGTGGAGGTaGAGTAGACAGATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRPPPWR*SRQIPG
Trigger: TCCCGGGATCTGTCTACTCCACCTCCACGGGGGAGG...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGTGCCAGCTTTTGTCGTaGGCCCCCGCCCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLCQLLS*APARWS
Trigger: GGACCAGCGGGCGGGGGCCCACGACAAAAGCTGGCA...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTCAGAGCGTGGGAAGCTaGCCATCACCCCGCCATACT +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPQSVGS*PSPRHT
Trigger: AGTATGGCGGGGTGATGGTCAGCTTCCCACGCTCTG...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCCAATGATGCGGGCGTaGACGCGGTGGTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNPMMRA*TRWSSG
Trigger: CCCGCTGGACCACCGCGTTCACGCCCGCATCATTGG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCGCAACTTTGATTTGTTaGGGAACCAGCCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLATLIC*GTSPLR
Trigger: CCGAAGTGGGCTGGTTCCGCAACAAATCAAAGTTGC...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCGTGGGTCCCCCTCGATaGGGATCAAATTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLVGPPR*GSNCSS
Trigger: AGAAGAGCAATTTGATCCGCATCGAGGGGGACCCAC...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGAGCTCTCGCTTGGCCTaGTGCACGCCCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKSSRLA*CTPCGS
Trigger: GGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCT...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTAAAGCCCGGTCCTCCTaGTCGGCCTGTAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPKARSS*SACSSF
Trigger: GAAGGAGCTACAGGCCGAGCAGGAGGACCGGGCTTT...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGAAAGCCCGGTCCTCCTaGTCGGCCTGTAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGKARSS*SACSSF
Trigger: GAAGGAGCTACAGGCCGAGCAGGAGGACCGGGCTTT...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAGGTTTCATGTATACCTaGAGCGCCTCACTGTCCACC +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAGFMYT*SASLST
Trigger: GGTGGACAGTGAGGCGCTGCAGGTATACATGAAACC...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGGGCAGGGACCCTTGGTaGTTTCAGACCCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVGRDPW*FQTPRQ
Trigger: CTGCCGTGGGGTCTGAAAGCACCAAGGGTCCCTGCC...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGTGGTGCCTACCACCTTaGCTCCAGGCTCCACTCACC +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGWCLPP*LQAPLT
Trigger: GGTGAGTGGAGCCTGGAGGCAAGGTGGTAGGCACCA...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAAGGGGACCCAGATGGTaGCTACCACCTTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTARGPRW*LPPCLQ
Trigger: CTGGAGGCAAGGTGGTAGGCACCATCTGGGTCCCCT...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCCCGACTCGATGGTCTaGGCAGGGCCCGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPPDSMV*AGPVGP
Trigger: GGGGCCGACGGGCCCTGCGCAGACCATCGAGTCGGG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391976.6
CDS-3UTR GCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGCCGCCTCTGTCAGCCTaGCAGCTTTTGTCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVPPLSA*QLLSWA
Trigger: GGCCCACGACAAAAGCTGGCAGGCTGACAGAGGCGG...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCATTGCTGGGGTCATCTaGGCGTGGGATCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLIAGVI*AWDLDF
Trigger: AAAATCCAGATCCCACGCCCAGATGACCCCAGCAAT...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGACGGACACCTTGTACTaGTCTTTGATTCTGTTTATG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEETDTLY*SLILFM
Trigger: CATAAACAGAATCAAAGACCAGTACAAGGTGTCCGT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCCAGCAGTCCAGCCTTaGCCCGGTCCAAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTPAVQP*PGPNLQ
Trigger: CTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGCTCTGGAAGGTGCCTTaGCCTCTTCGTGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGLWKVP*PLRVLG
Trigger: CCCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAG...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGCCTTCTCACTGCTGCTaGCGGTCCAGGGTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKPSHCC*RSRVRP
Trigger: GGGACGCACCCTGGACCGCCAGCAGCAGTGAGAAGG...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCTTGATCATTATCGTTTaGGGCCCCAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLLIIIV*GPKGGS
Trigger: AGACCCTCCCTTGGGGCCCCAAACGATAATGATCAA...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTTGATCATTATCGTTTaGGGCCCCAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DTASGGDAPQLASSFRRSLIIIV*GPKGGS
Trigger: AGACCCTCCCTTGGGGCCCCAAACGATAATGATCAA...ACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTCGGCATCCAGCGGCGTaGTCTGCATTCTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRRHPAA*SAFCST
Trigger: GGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCG...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTCGCTGCGATGGAGATTaGGGGGAGCTGGAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPRCDGD*GELEAS
Trigger: GCTTGCTTCCAGCTCCCCCCAATCTCCATCGCAGCG...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGCGCTGCGATGGAGATTaGGGGGAGCTGGAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRRCDGD*GELEAS
Trigger: GCTTGCTTCCAGCTCCCCCCAATCTCCATCGCAGCG...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCCCTCATAAATCTTCTTaGTGCGAGCCACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLPHKSS*CEPQPE
Trigger: CTCAGGCTGTGGCTCGCATCAAGAAGATTTATGAGG...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCTCAGAGATGCTGTCTaGGGGTGGGATCTCAACGGA +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTLRDAV*GWDLNG
Trigger: TCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCGACAGAGGAGACGGTaGAGCTATTGGCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTRQRRR*SYWPWH
Trigger: ATGCCAAGGCCAATAGCTTCACCGTCTCCTCTGTCG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCCAATGATTGTGCGATaGAATCTTTGCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEPMIVR*NLCSMI
Trigger: AATCATTGAGCAAAGATTTCATCGCACAATCATTGG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTCACCCTTCTGCCCAATaGTTGTGCGATGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSHPSAQ*LCDEIF
Trigger: AAAGATTTCATCGCACAATCATTGGGCAGAAGGGTG...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTCTTGTGAAACTGTTTaGAGATCGGAACAGAAATTG +
Preference number: 4 (lower is better)
Translates to: RTHSQALGSLRDLGKGEESCETV*RSEQKL
Trigger: CAATTTCTGTTCCGATCTTCAAACAGTTTCACAAGA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCGCCGCACTCCTCCATaGTGGAGCGGATCAGACGGC +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNRRTPP*WSGSDG
Trigger: GCCGTCTGATCCGCTCCATCATGGAGGAGTGCGGCG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCTCCTCAATGATCTCCTaGATGCGTTTCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLSSMIS*MRFLAA
Trigger: GGCAGCCAAGAAACGCATTCAGGAGATCATTGAGGA...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCCAATGATGCGGGCGTaGACGCGGTGGTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEPMMRA*TRWSSG
Trigger: CCCGCTGGACCACCGCGTTCACGCCCGCATCATTGG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp AGAGCTGCTCATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATTCCTCCTCCAGATTaGGGATGTGGTCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: RAAHVRSLCRERTRLQEGIPPPD*GCGRWL
Trigger: AAGCCATCGACCACATCCTCAATCTGGAGGAGGAAT...CCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACATGAGCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR TCA 90 bp GGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCGGGTTCTGTTCTTTTTaGTCATTATCGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GACAERGHGFRRGCSPTRGFCSF*SLSFGA
Trigger: GGCCCCAAACGATAATGATCAAAAAGAACAGAACCC...GCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR TCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCAGTGGAGCAGGTCCTaGGCGGGCACGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPQWSRS*AGTARP
Trigger: AGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGCCACTCCACGCCGGCTaGGGTAGAAAGAAGGCAACT +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRPLHAG*GRKKAT
Trigger: AGTTGCCTTCTTTCTACCTCAGCCGGCGTGGAGTGG...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGCTCGGCCCTAGACCGTaGAAACTGCCAGTCACCCGG +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKLGPRP*KLPVTR
Trigger: CCGGGTGACTGGCAGTTTTCACGGTCTAGGGCCGAG...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTAGCTCTCGCTTGGCCTaGTGCACGCCCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVSSRLA*CTPCGS
Trigger: GGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGGCCAGATGCAGGAGCTaGTTCTTGGCCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTARCRS*FLAFST
Trigger: TGTGGAGAAGGCCAAGAAGCAGCTCCTGCATCTGGC...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAGGGAAGATGACACGTaGTCCAGTGCTGTCGCGCAC +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRREDDT*SSAVAH
Trigger: GTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCT...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTCCTCAGAAACCATCTaGTCAAGTTCACCCACAATT +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERSSETI*SSSPTI
Trigger: AATTGTGGGTGAACTTGAGCAGATGGTTTCTGAGGA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTCTAGACCGTGAAAACTaGCAGTCACCCGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPLDREN*QSPGTC
Trigger: GCAGGTCCCGGGTGACTGGCAGTTTTCACGGTCTAG...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACGCGTGGTCTGCATTCTaGTCTACCTCATGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDAWSAF*STSCSR
Trigger: CCTAGAGCATGAGGTAGAGCAGAATGCAGACCACGC...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGTCCAGCGGCGTGGTCTaGATTCTGCTCTACCTCATG +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTSSGVV*ILLYLM
Trigger: CATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGA...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTTCATGTCATCACCCTTaGAACAACCACCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSSCHHP*NNHPKE
Trigger: TTCCTTTGGGTGGTTGTTGCAAGGGTGATGACATGA...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCAATAACAAAGCGATaGTGTTCTTTGGGAATGGCA +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERPITKR*CSLGMA
Trigger: TGCCATTCCCAAAGAACACCATCGCTTTGTTATTGG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGCCAATAACAAAGCGATaGTGTTCTTTGGGAATGGCA +
Preference number: 4 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPPITKR*CSLGMA
Trigger: TGCCATTCCCAAAGAACACCATCGCTTTGTTATTGG...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGGCAGCTTGGCAGGGATaGAGACCTCTACCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRAAWQG*RPLPRL
Trigger: TAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGC...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCACATTATCCAGGTTTTaGATCAAGGCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLTLSRF*IKASSS
Trigger: GGAGCTGGAGGCCTTGATCCAAAACCTGGATAATGT...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTCCCATGACAGATCGATaGAATTTCTGGGGTATAGCA +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSPMTDR*NFWGIA
Trigger: TGCTATACCCCAGAAATTCCATCGATCTGTCATGGG...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACCAGCAGTCCAGCCTTaGCCCGGTCCAAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAPAVQP*PGPNLQ
Trigger: CTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTTGGGGCTCCGCTCTGTaGGAAGCGAATGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRWGSAL*EANVHL
Trigger: AAGGTGGACATTCGCTTCCCACAGAGCGGAGCCCCA...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: DTASGGDAPQLASSFRRSFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...ACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp AGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGAAAACCATTGTGTGGTTaGGTTTGGGTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: REDTASGGDAPQLASSFRKPLCG*VWVSRL
Trigger: CAGCCTGCTGACCCAAACCCAACCACACAATGGTTT...TCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp GACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DTASGGDAPQLASSFRRSRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...ACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGACAAACAGGACTGTCTaGACCAAGGGAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLTNRTV*TKGNWQ
Trigger: CTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGT...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCAAGAGACGGGTGTGTaGGGTGGCACTAACTGCACA +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTQETGV*GGTNCT
Trigger: TGTGCAGTTAGTGCCACCCCACACACCCGTCTCTTG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCCTGCTCCTAGGGGCTaGCCTGCACAGCCGGATGGC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVPAPRG*PAQPDG
Trigger: GCCATCCGGCTGTGCAGGCCAGCCCCTAGGAGCAGG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGGACGCCCGACTCGATaGTCTGCGCAGGGCCCGTCG +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPGRPTR*SAQGPS
Trigger: CGACGGGCCCTGCGCAGACCATCGAGTCGGGCGTCC...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391976.6
CDS-3UTR TCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACGGTACATGGAACACCTaGGTGATGACAGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDGTWNT*VMTEAL
Trigger: CAAGGCTTCTGTCATCACTCAGGTGTTCCATGTACC...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGCCAATGATGAAACGGTaGAGCCAGGAAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLPMMKR*SQEGAA
Trigger: CGCCGCCCCTTCCTGGCTTCACCGTTTCATCATTGG...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGTTGGCATCTGCTGAGTaGTTTTGGCCAGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTLASAE*FWPGSA
Trigger: GGCAGAACCTGGCCAAAATCACTCAGCAGATGCCAA...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGGGCCCTTGGTGCCAATaGGGGAGTTGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLGPWCQ*GSCAAW
Trigger: CCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCC...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCGCCGCACTCCTCCATaGTGGAGCGGATCAGACGGC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVRRTPP*WSGSDG
Trigger: GCCGTCTGATCCGCTCCATCATGGAGGAGTGCGGCG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCCTGGCCTCTGCGGATaGCGAAGTGGCGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVPGLCG*RSGGGA
Trigger: AGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGCTTCCAGGTCCTCAATaGTCTCCTGAATGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLLPGPQ*SPECVS
Trigger: AGAAACGCATTCAGGAGATCATTGAGGACCTGGAAG...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAAACCTTTGGGGCCCATaGCAGATCGATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAANLWGP*QIDGIS
Trigger: AGAAATTCCATCGATCTGTCATGGGCCCCAAAGGTT...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGACTGGCTCTGTACTGTaGACTGCGTTCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTTGSVL*TAFSSL
Trigger: CAGAGAGGAGAACGCAGTTCACAGTACAGAGCCAGT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCAGATGGGGAAGAGGTaGCAGCCCTTCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNQMGKR*QPFPTG
Trigger: GCCAGTGGGGAAGGGCTGTCACCTCTTCCCCATCTG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAGCTCTCGCTTGGCCTaGTGCACGCCCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVSSRLA*CTPCGS
Trigger: GGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTGCCAGATGCAGGAGCTaGTTCTTGGCCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRARCRS*FLAFST
Trigger: TGTGGAGAAGGCCAAGAAGCAGCTCCTGCATCTGGC...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAGACTGCAGCTCAGGTaGCGGGACATGTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTRLQLR*RDMYVH
Trigger: GTGAACATACATGTCCCGGCACCTGAGCTGCAGTCT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGGCGATGATGTCAGACTaGAGCTCAGGTGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSAMMSD*SSGAGT
Trigger: TGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGC...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGTCCAGCGGCGTGGTCTaGATTCTGCTCTACCTCATG +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRSSGVV*ILLYLM
Trigger: CATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGA...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCCGCCTCTGTCAGCCTaGCAGCTTTTGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEPPLSA*QLLLGP
Trigger: GGGCCCGAGCAAAAGCTGGCAGGCTGACAGAGGCGG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391976.6
CDS-3UTR CCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACAGAGGCCTTGGTCTTTaGCCAAAGACAGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDRGLGL*PKTAPS
Trigger: ACTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCT...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCATGAGTAAGACTTCATaGCGAGCTTTCTCGATGCCC +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLMSKTS*RAFSMP
Trigger: GGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCAT...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTGGGAGTTGTGCAGCTTaGCAGGGATGGAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRGSCAA*QGWRPL
Trigger: TAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCC...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGAGTGGCGGTGGTGCTTaGGGTCCACCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKSGGGA*GPPAWS
Trigger: ACTCCATGCTGGTGGACCCCAAGCACCACCGCCACT...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGCTGTGTGCCAGAGCGTaGGAAGCTGACCATCACCCC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKLCARA*EADHHP
Trigger: GGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAG...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACTCCCGAGTAATCTGCTaGATTCTGGAACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDSRVIC*ILEPLG
Trigger: CCCCAAAGGTTCCAGAATCCAGCAGATTACTCGGGA...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGCTCTGGAAGGTGCCTTaGCCTCTTCGTGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLLWKVP*PLRVLG
Trigger: CCCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAG...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCATTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCTTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTCAAGAGACGGGTGTGTaGGGTGGCACTAACTGCACA +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPQETGV*GGTNCT
Trigger: TGTGCAGTTAGTGCCACCCCACACACCCGTCTCTTG...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGGCTCAGTCACCTCCGTaGCGGACACAGATAAGGATG +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRAQSPP*RTQIRM
Trigger: CATCCTTATCTGTGTCCGCCACGGAGGTGACTGAGC...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGGGCTGCCTGAGCAAATaGGGACTTGCCGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKGCLSK*GLAEAA
Trigger: AGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCC...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCCAGAAGGTCCGTCCTaGGGCCGCCTCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPPEGPS*GRLCQP
Trigger: AGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCACACCAGTTCTCTGCATaGTCTCAAGGCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAHQFSA*SQGRFL
Trigger: CAAAAATCTGCCTTGAGATCATGCAGAGAACTGGTG...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGGCTTTCCTGACACCATaGTGGAGAGGCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGAFLTP*WRGLGL
Trigger: AAGACCAAGGCCTCTCCATCATGGTGTCAGGAAAGC...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTCCTTCCGAGCTTTCATaGCAGCATCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPPSELS*QHPAFL
Trigger: CAGGAAAGCTGGATGCTGTCATGAAAGCTCGGAAGG...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGCCTGCTCGGCAGAGATaGGTAAGACTTCATGGCGAG +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVPARQR*VRLHGE
Trigger: CTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGG...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTTGCCTGTCTCCTGCATaGTCTCGCCAACCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRCLSPA*SRQPVY
Trigger: ATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCA...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGGTTCCTTCTCTCCAGTaGAGACAATCTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTVPSLQ*RQSLSG
Trigger: ACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAAC...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCCAATGATGAAACGGTaGAGCCAGGAAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVPMMKR*SQEGAA
Trigger: CGCCGCCCCTTCCTGGCTTCACCGTTTCATCATTGG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGTTGGCATCTGCTGAGTaGTTTTGGCCAGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGLASAE*FWPGSA
Trigger: GGCAGAACCTGGCCAAAATCACTCAGCAGATGCCAA...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGTGTCTTCGCCCTCTGTaGACTCGATGTGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTCLRPL*TRCEPL
Trigger: CAAAGGTTCACATCGAGTTCACAGAGGGCGAAGACA...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCCTTCCACGGGAAAGTaGATGTGGACCCCGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVPSTGK*MWTPPH
Trigger: GTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCAGCCGCAGGGAAGATaGCACGTGCTCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNQPQGR*HVLQCC
Trigger: ACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCAGCCGCAGGGAAGATaGCACGTGCTCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVQPQGR*HVLQCC
Trigger: ACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACCTTCCAGGTCCTCAATaGTCTCCTGAATGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDLPGPQ*SPECVS
Trigger: AGAAACGCATTCAGGAGATCATTGAGGACCTGGAAG...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGAAAATCAGGACTGCCTaGGAACCCGTCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVKIRTA*EPVTLC
Trigger: GCAGAGGGTGACGGGTTCTCAGGCAGTCCTGATTTT...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCTCGGCCCTAGACCGTaGAAACTGCCAGTCACCCGG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPELGPRP*KLPVTR
Trigger: CCGGGTGACTGGCAGTTTTCACGGTCTAGGGCCGAG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTAGCTATGGAAACAGATaGTATGGAAGACATCCAACA +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSSYGNR*YGRHPT
Trigger: TGTTGGATGTCTTCCATATCATCTGTTTCCATAGCT...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGGCAACTTTGATTTGTTaGGGAACCAGCCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTATLIC*GTSPLR
Trigger: CCGAAGTGGGCTGGTTCCGCAACAAATCAAAGTTGC...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAGTGGGTCCCCCTCGATaGGGATCAAATTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAVGPPR*GSNCSS
Trigger: AGAAGAGCAATTTGATCCGCATCGAGGGGGACCCAC...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGATTTTCCATGCGAGATaGAAGCTCCAGCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTIFHAR*KLQQLS
Trigger: CGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAAT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGTCTGCATGTATTTTGTaGATTTTTCCACCTCATTCT +
Preference number: 4 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGSACIL*IFPPHS
Trigger: AGAATGAGGTGGAAAAATGCACAAAATACATGCAGA...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGGGTCGATTTTGGTGTTaGTTTCTTCACGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: VLNSGAGPERARPGLEERGRFWC*FLHESF
Trigger: AAAAGATTCGTGAAGAAAGCAACACCAAAATCGACC...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGAGGGAAGATGACACGTaGTCCAGTGCTGTCGCGCAC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKREDDT*SSAVAH
Trigger: GTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCT...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCTCCAGCTCCTTCTGTaGCTCTCGGACGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPELQLLL*LSDGVL
Trigger: GAGGACGCCGTCCGAGAGGCACAGAAGGAGCTGGAG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCAAAATCCCGAGTAATCTaGTGGATTCTGGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIAKSRVI*WILEPL
Trigger: CAAAGGTTCCAGAATCCAGCAGATTACTCGGGATTT...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGGCCCGGTCCAAATTTaGAGCGAGGCCCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEGPVQI*SEARDG
Trigger: GCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGCCTCCTGCTGTCCATTaGCAGGTCTTCCTTGCACCC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKPPAVH*QVFLAP
Trigger: GGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGG...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGGCCCATTCAGGGCTaGCTGAGCAAATGGGGACTT +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSRPIQG*LSKWGL
Trigger: AAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCT...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCCAGCGGTCTCTCTCTaGAAGGTGCATCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEPAVSL*KVHPGP
Trigger: GGGGCCTGGATGCACCTTGCAGAGAGAGACCGCTGG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAGAGGCCTTGGTCTTTaGCCAAAGACAGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTRGLGL*PKTAPS
Trigger: ACTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGATGATGGAGAGGCCTTaGTCTTTGGCCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTMMERP*SLAKDS
Trigger: GCTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCAT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATATGACGAAGTGGCGGTaGTGCTTGGGGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNMTKWR*CLGSTS
Trigger: GCTGGTGGACCCCAAGCACCACCGCCACTTCGTCAT...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCTGCGGATGACGAAGTaGCGGTGGTGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPELRMTK*RWCLGS
Trigger: GGACCCCAAGCACCACCGCCACTTCGTCATCCGCAG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACTGCTCCAACCGGATTTaGGTAATTACTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDCSNRI*VITAPF
Trigger: AAAGGGGGCAGTAATTACCCAAATCCGGTTGGAGCA...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGTCCTTATCAGGAAACTaGATGTTCACGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLSLSGN*MFTSCS
Trigger: GGAGCATGACGTGAACATCCAGTTTCCTGATAAGGA...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGGGAAGGGCTGTGAGATaGATGGGCGTGAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSGRAVR*MGVSQL
Trigger: AAGCTGACTCACGCCCATCCATCTCACAGCCCTTCC...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCACTGGCCTCCCCCGTaGAGGTGGAGTAGACAGATC +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVHWPPP*RWSRQI
Trigger: GATCTGTCTACTCCACCTCCACGGGGGAGGCCAGTG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGCAGAACTCATGCAGATaGGGAAGAGGTGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRQNSCR*GRGDSP
Trigger: AGGGCTGTCACCTCTTCCCCATCTGCATGAGTTCTG...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAATTAAAATTGACCTTTaGGAGAGGGTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAIKIDL*ERVGAG
Trigger: TCCTGCCCCTACCCTCTCCCAAAGGTCAATTTTAAT...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGAAAGACAGCTCCAAGTaGGCACCAGTTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRKDSSK*APVLCM
Trigger: CATGCAGAGAACTGGTGCTCACTTGGAGCTGTCTTT...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAGTTCCTTCTCTCCAGTaGAGACAATCTCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAVPSLQ*RQSLSG
Trigger: ACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAAC...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGACTTGTGGTCGATGTTaGTCTCCACATAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTTCGRC*SPHSPS
Trigger: GGATGGACTATGTGGAGATCAACATCGACCACAAGT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCCCTTGTACTGGTCTTTaGTTCTGTTTATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QGLSASSGVVCILLYLMLPCTGL*FCLCWH
Trigger: GTGCCAACATAAACAGAATCAAAGACCAGTACAAGG...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCGATCGGAACAGAAATTaGATAGCTATTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLDRNRN*IAIFHQ
Trigger: CTGGTGGAAAATAGCTATTCAATTTCTGTTCCGATC...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGGGCCCTTGGTGCCAATaGGGGAGTTGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVGPWCQ*GSCAAW
Trigger: CCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCC...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCAGAGCGTGGGAAGCTaGCCATCACCCCGCCATACT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVQSVGS*PSPRHT
Trigger: AGTATGGCGGGGTGATGGTCAGCTTCCCACGCTCTG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTGCAACTTTGATTTGTTaGGGAACCAGCCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRATLIC*GTSPLR
Trigger: CCGAAGTGGGCTGGTTCCGCAACAAATCAAAGTTGC...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCGCGTGCCTGTCTCCTaGATGATCTCGCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVRVPVS*MISPTS
Trigger: ACTGGTTGGCGAGATCATGCAGGAGACAGGCACGCG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGGTCGATTTTGGTGTTaGTTTCTTCACGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSGRFWC*FLHESF
Trigger: AAAAGATTCGTGAAGAAAGCAACACCAAAATCGACC...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGACGAAGTGGCGGTGGTaGTTGGGGTCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPETKWRW*LGSTSM
Trigger: CATGCTGGTGGACCCCAAGCACCACCGCCACTTCGT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAATGCGTTTCTTGGCTaGCTCCACACAGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSNAFLG*LHTVLG
Trigger: GCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCATT...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGAAAGCCCGGTCCTCCTaGTCGGCCTGTAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEKARSS*SACSSF
Trigger: GAAGGAGCTACAGGCCGAGCAGGAGGACCGGGCTTT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGGTTTCATGTATACCTaGAGCGCCTCACTGTCCACC +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTGFMYT*SASLST
Trigger: GGTGGACAGTGAGGCGCTGCAGGTATACATGAAACC...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGAATCCTAGCCACGGCTaGGGAGCTCTCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLNPSHG*GALVMK
Trigger: CTTCATCACGAGAGCTCCGCAGCCGTGGCTAGGATT...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGATGAGTAAGACTTCATaGCGAGCTTTCTCGATGCCC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTMSKTS*RAFSMP
Trigger: GGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCAT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTGCAGCTTGGCAGGGATaGAGACCTCTACCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVAAWQG*RPLPRL
Trigger: TAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGC...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGGGGAGTTGTGCAGCTTaGCAGGGATGGAGACCTCTA +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLGSCAA*QGWRPL
Trigger: TAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCC...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGATGACGAAGTGGCGGTaGTGCTTGGGGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVMTKWR*CLGSTS
Trigger: GCTGGTGGACCCCAAGCACCACCGCCACTTCGTCAT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCTGTGTGCCAGAGCGTaGGAAGCTGACCATCACCCC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPELCARA*EADHHP
Trigger: GGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGCCTGAATGCGTTTCTTaGCTGCCTCCACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVPECVS*LPPHSP
Trigger: AGGACTGTGTGGAGGCAGCCAAGAAACGCATTCAGG...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGTGCTCCAACCGGATTTaGGTAATTACTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTCSNRI*VITAPF
Trigger: AAAGGGGGCAGTAATTACCCAAATCCGGTTGGAGCA...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGTTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAACCATTGTGTGGTTaGGTTTGGGTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRKPLCG*VWVSRL
Trigger: CAGCCTGCTGACCCAAACCCAACCACACAATGGTTT...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGGCTCAGTCACCTCCGTaGCGGACACAGATAAGGATG +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLAQSPP*RTQIRM
Trigger: CATCCTTATCTGTGTCCGCCACGGAGGTGACTGAGC...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCACTGGCCTCCCCCGTaGAGGTGGAGTAGACAGATC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVHWPPP*RWSRQI
Trigger: GATCTGTCTACTCCACCTCCACGGGGGAGGCCAGTG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACCCAGAAGGTCCGTCCTaGGGCCGCCTCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNPEGPS*GRLCQP
Trigger: AGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGG...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTAGCATCCAGCTTTCCTaGCACCATGATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVSIQLS*HHDGEA
Trigger: GGCCTCTCCATCATGGTGTCAGGAAAGCTGGATGCT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCCAATGATGAAACGGTaGAGCCAGGAAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPPMMKR*SQEGAA
Trigger: CGCCGCCCCTTCCTGGCTTCACCGTTTCATCATTGG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCACCAATGATTGTGCGATaGAATCTTTGCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIAPMIVR*NLCSMI
Trigger: AATCATTGAGCAAAGATTTCATCGCACAATCATTGG...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTAACGGTGTCGCTTCCTaGACCTTCCACGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVNGVAS*TFHGKV
Trigger: CACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACATTCTAATGTCACCTaGGCTTCCAGGTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAHSNVT*ASRSSM
Trigger: CATTGAGGACCTGGAAGCTCAGGTGACATTAGAATG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGCAGCTGGAGGAGGCTaGTTGCACTCCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEAAGGG*LHSTNR
Trigger: CCTGTTTGTGGAGTGCAATCAGCCTCCTCCAGCTGC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCGCGTGCCTGTCTCCTaGATGATCTCGCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVRVPVS*MISPTS
Trigger: ACTGGTTGGCGAGATCATGCAGGAGACAGGCACGCG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCACTGTCAGGAGGGATaGGCACGGACACCTTGTACT +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNHCQEG*ARTPCT
Trigger: AGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGTTCTCCTCCGCCAGATaGAGGAGCTGCTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEFSSAR*RSCFLA
Trigger: GGCCAAGAAGCAGCTCCTGCATCTGGCGGAGGAGAA...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGGTGAAACTCTTGGTTTaGTTCTCCTCCGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSVKLLV*FSSARC
Trigger: GCATCTGGCGGAGGAGAAGCAAACCAAGAGTTTCAC...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAGGGAAGATGACACGTaGTCCAGTGCTGTCGCGCAC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVREDDT*SSAVAH
Trigger: GTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGAATGCGTTTCTTGGCTaGCTCCACACAGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKNAFLG*LHTVLG
Trigger: GCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCATT...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGACTCATCCATCATCTTaGGGATCCCACTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTTHPSS*GSHFLS
Trigger: AGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGCGATGATGTCAGACTaGAGCTCAGGTGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEAMMSD*SSGAGT
Trigger: TGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTGGGGTGGCACTAACTaGACAGAGACCACTCCACGC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVWGGTN*TETTPR
Trigger: GCGTGGAGTGGTCTCTGTGCAGTTAGTGCCACCCCA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGATGATGGAGAGGCCTTaGTCTTTGGCCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVMMERP*SLAKDS
Trigger: GCTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCAT...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAAGCGATGGTGTTCTTTaGGAATGGCAACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTASDGVL*EWQQLL
Trigger: CAGCAACTGTTGCCATTCCCAAAGAACACCATCGCT...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGCCAGCGATGAAGGGGTaGAATGCCTTTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGPAMKG*NAFSTS
Trigger: AGAAGTAGAAAAGGCATTCCACCCCTTCATCGCTGG...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGCCTGTGGAACTTGTaGTCGATGTTGATCTCCACA +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTACLWNL*SMLIST
Trigger: TGTGGAGATCAACATCGACCACAAGTTCCACAGGCA...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGCCAATGAGGTGCCTGTaGAACTTGTGGTCGATGTTG +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVPMRCL*NLWSML
Trigger: CAACATCGACCACAAGTTCCACAGGCACCTCATTGG...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAATTGCTATTCTCTGCTaGAAGGTCGATTTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAIAILC*KVDFGV
Trigger: AACACCAAAATCGACCTTCCAGCAGAGAATAGCAAT...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTATGGTGATCAGGTCCTaGTCCTTGTCCTCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVMVIRS*SLSSAA
Trigger: TGCGGCTGAGGACAAGGACCAGGACCTGATCACCAT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGATCTCCCGCAAGACCTaGCCTCTGCGGATGACGAAG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVISRKT*PLRMTK
Trigger: CTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGAT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTTGCTCCAACCGGATTTaGGTAATTACTGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRCSNRI*VITAPF
Trigger: AAAGGGGGCAGTAATTACCCAAATCCGGTTGGAGCA...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGATTTGGTCCTGGGGCTaGTTCCCATCGTCCTTATCA +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVIWSWG*FPSSLS
Trigger: TGATAAGGACGATGGGAACCAGCCCCAGGACCAAAT...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGATGGTAATTTGGTCCTaGGGCTGGTTCCCATCGTCC +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLMVIWS*GWFPSS
Trigger: GGACGATGGGAACCAGCCCCAGGACCAAATTACCAT...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTTCCTCCACATTCTCTaGGAGCCCCGTCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVFLHIL*EPRHSD
Trigger: GTCACTGTGACGGGGCTCCCAGAGAATGTGGAGGAA...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGGCTGCCTGAGCAAATaGGGACTTGCCGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPGCLSK*GLAEAA
Trigger: AGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCC...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCATGGAAACAGATGATATaGAAGACATCCAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAAWKQMI*KTSNKE
Trigger: CTCCTTGTTGGATGTCTTCCATATCATCTGTTTCCA...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAAACGGAACTCATGGTTaGTCTCACACCTACACACAA +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTANGTHG*SHTYTQ
Trigger: TTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTT...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACATTAGAGTGGCAACTTTaGTTTGTTGCGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTLEWQL*FVAEPA
Trigger: GGCTGGTTCCGCAACAAATCAAAGTTGCCACTCTAA...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAGCATCCAGCTTTCCTaGCACCATGATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVSIQLS*HHDGEA
Trigger: GGCCTCTCCATCATGGTGTCAGGAAAGCTGGATGCT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCCTTCCGAGCTTTCATaGCAGCATCCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVPSELS*QHPAFL
Trigger: CAGGAAAGCTGGATGCTGTCATGAAAGCTCGGAAGG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTATACGGCCCAGCGATaGAGGGGTGGAATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVYTAQR*RGGMPF
Trigger: AAAAGGCATTCCACCCCTTCATCGCTGGGCCGTATA...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAACTTCAGTCAACGCCTaGCCTAACTTTTCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTTSVNA*PNFSGS
Trigger: CGAACCTGAAAAGTTAGGTCAGGCGTTGACTGAAGT...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391975.5
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCCTTGTACTGGTCTTTaGTTCTGTTTATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTPCTGL*FCLCWH
Trigger: GTGCCAACATAAACAGAATCAAAGACCAGTACAAGG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGCACCCTTCTGCCCAATaGTTGTGCGATGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGHPSAQ*LCDEIF
Trigger: AAAGATTTCATCGCACAATCATTGGGCAGAAGGGTG...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCATCTTGTGAAACTGTTTaGAGATCGGAACAGAAATTG +
Preference number: 4 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAASCETV*RSEQKL
Trigger: CAATTTCTGTTCCGATCTTCAAACAGTTTCACAAGA...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCGCCTCCTTTCCCAATaGTATTCTTGTGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTRLLSQ*YSCETV
Trigger: AACAGTTTCACAAGAATATCATTGGGAAAGGAGGCG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAACGGTGTCGCTTCCTaGACCTTCCACGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVNGVAS*TFHGKV
Trigger: CACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGCATTCTAATGTCACCTaGGCTTCCAGGTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSHSNVT*ASRSSM
Trigger: CATTGAGGACCTGGAAGCTCAGGTGACATTAGAATG...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTGGGTTCTGTTCTTTTTaGTCATTATCGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPGFCSF*SLSFGA
Trigger: GGCCCCAAACGATAATGATCAAAAAGAACAGAACCC...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGGGTCACCCTAGCCTATaGAGCTGGAAGCTATATTCC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKGHPSL*SWKLYS
Trigger: GGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACC...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCGACAGAGGAGACGGTaGAGCTATTGGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVRQRRR*SYWPSP
Trigger: AGGAGAAGGCCAATAGCTTCACCGTCTCCTCTGTCG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373292.8
ENST00000427183.6
CDS-3UTR GCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAATTTTGGCCAGGTTCTaGCCTTTCTTGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAILARF*PFLPMM
Trigger: CATCATTGGCAAGAAAGGGCAGAACCTGGCCAAAAT...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGCGATGCGGATCAAATTaGTCTTCTCACTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSRCGSN*SSHCQE
Trigger: CTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCG...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGATTTTCCATGCGAGATaGAAGCTCCAGCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLIFHAR*KLQQLS
Trigger: CGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAAT...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGCCAGATGCAGGAGCTaGTTCTTGGCCTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEARCRS*FLAFST
Trigger: TGTGGAGAAGGCCAAGAAGCAGCTCCTGCATCTGGC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGGTGAAACTCTTGGTTTaGTTCTCCTCCGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLVKLLV*FSSARC
Trigger: GCATCTGGCGGAGGAGAAGCAAACCAAGAGTTTCAC...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTAATGCGTTTCTTGGCTaGCTCCACACAGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVNAFLG*LHTVLG
Trigger: GCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCATT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAAATCCCGAGTAATCTaGTGGATTCTGGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTKSRVI*WILEPL
Trigger: CAAAGGTTCCAGAATCCAGCAGATTACTCGGGATTT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGACTCATCCATCATCTTaGGGATCCCACTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGTHPSS*GSHFLS
Trigger: AGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGT...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGCGATGATGTCAGACTaGAGCTCAGGTGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPAMMSD*SSGAGT
Trigger: TGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGC...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGGATTTGGGTAATTACTaGCCCCTTTCTCCCGATAAT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTDLGNY*PLSPDN
Trigger: ATTATCGGGAGAAAGGGGGCAGTAATTACCCAAATC...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAATCCTAGCCACGGCTaGGGAGCTCTCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVNPSHG*GALVMK
Trigger: CTTCATCACGAGAGCTCCGCAGCCGTGGCTAGGATT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGACCTCCCCCAACCTGTaGGCATCTCAATCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVTSPNL*ASQSQQ
Trigger: CTGCTGTGATTGAGATGCGCACAGGTTGGGGGAGGT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGATGCATCATGACAGTTaGTACAAAAAGCCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRMHHDS*YKKPAV
Trigger: GACCGCTGGCTTTTTGTAGCAACTGTCATGATGCAT...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427183.6
CDS-3UTR CCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATCTGGGCGTGGGATCTaGATTTTGGTTGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTASGRGI*ILVAVF
Trigger: AAAAACTGCAACCAAAATCCAGATCCCACGCCCAGA...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGGGGTCATCTGGGCGTaGGATCTGGATTTTGGTTGC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEGVIWA*DLDFGC
Trigger: GCAACCAAAATCCAGATCCCACGCCCAGATGACCCC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACACGGACACCTTGTACTaGTCTTTGATTCTGTTTATG +
Preference number: 4 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDTDTLY*SLILFM
Trigger: CATAAACAGAATCAAAGACCAGTACAAGGTGTCCGT...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCTGGAAGGTCGATTTTaGTGTTGCTTTCTTCACGAA +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTLEGRF*CCFLHE
Trigger: TTCGTGAAGAAAGCAACACCAAAATCGACCTTCCAG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGATGGTGATCAGGTCCTaGTCCTTGTCCTCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVMVIRS*SLSSAA
Trigger: TGCGGCTGAGGACAAGGACCAGGACCTGATCACCAT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTATCTCCCGCAAGACCTaGCCTCTGCGGATGACGAAG +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPISRKT*PLRMTK
Trigger: CTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGAT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGTCCCGAGTAATCTGCTaGATTCTGGAACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKSRVIC*ILEPLG
Trigger: CCCCAAAGGTTCCAGAATCCAGCAGATTACTCGGGA...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTGGACCAAGGGAAACTaGCAGGAGGGAGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVWTKGN*QEGGGK
Trigger: TTTCCCACCTCCCTCCTGCCAGTTTCCCTTGGTCCA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCCAGTGATCTTGATCTaGTTGCTGGGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEPVILI*LLGSSG
Trigger: CCCAGATGACCCCAGCAATCAGATCAAGATCACTGG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGTATACGGCCCAGCGATaGAGGGGTGGAATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEYTAQR*RGGMPF
Trigger: AAAAGGCATTCCACCCCTTCATCGCTGGGCCGTATA...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGTGCCTGTCTCCTGCATaGTCTCGCCAACCAGTCTAT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPECLSPA*SRQPVY
Trigger: ATAGACTGGTTGGCGAGATCATGCAGGAGACAGGCA...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATTGCCCTTGGGCCCAATaGCATACTTGTGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNCPWAQ*HTCVGI
Trigger: AATCCCAACACAAGTATGTCATTGGGCCCAAGGGCA...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391975.5
CDS-3UTR TCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATACCTTTGGCATCTGCTaGGTGATTTTGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNTFGIC*VILARF
Trigger: GAACCTGGCCAAAATCACTCAGCAGATGCCAAAGGT...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGTTGGCCAGGTCTTTCTaGATAGACAGAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKLARSF*IDRILL
Trigger: GAGCAGGATTCTGTCTATTCAGAAAGACCTGGCCAA...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTAACGGTGTCGCTTCCTaGACCTTCCACGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPNGVAS*TFHGKV
Trigger: CACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGAACCTTTGGGGCCCATaGCAGATCGATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKNLWGP*QIDGIS
Trigger: AGAAATTCCATCGATCTGTCATGGGCCCCAAAGGTT...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTATTCCTCCTCCAGATTaGGGATGTGGTCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVIPPPD*GCGRWL
Trigger: AAGCCATCGACCACATCCTCAATCTGGAGGAGGAAT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGTACGCTCATTTTCCATaGGAGATGCAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKYAHFP*EMQAPA
Trigger: TGCTGGAGCTTGCATCTCGCATGGAAAATGAGCGTA...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGTCTGCATGTATTTTGTaGATTTTTCCACCTCATTCT +
Preference number: 4 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLSACIL*IFPPHS
Trigger: AGAATGAGGTGGAAAAATGCACAAAATACATGCAGA...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCTCTGTACTGTGAACTaGGTTCTCCTCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNLCTVN*VLLSVW
Trigger: CCAGACAGAGAGGAGAACGCAGTTCACAGTACAGAG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAGACTGCAGCTCAGGTaGCGGGACATGTATGTTCAC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVRLQLR*RDMYVH
Trigger: GTGAACATACATGTCCCGGCACCTGAGCTGCAGTCT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGCTGCAACGGAACTCATaGTTGATCTCACACCTACAC +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLLQRNS*LISHLH
Trigger: GTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAG...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACGCTCCAGCGGGTTCCTaGGCACTTTCCAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNAPAGS*ALSRQA
Trigger: TGCTTGCCTGGAAAGTGCCCAGGAACCCGCTGGAGC...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTATGGTGATCAGGTCCTaGTCCTTGTCCTCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPMVIRS*SLSSAA
Trigger: TGCGGCTGAGGACAAGGACCAGGACCTGATCACCAT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGACATTATCCAGGTTTTaGATCAAGGCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKTLSRF*IKASSS
Trigger: GGAGCTGGAGGCCTTGATCCAAAACCTGGATAATGT...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATTGGGGTCCACCAGCATaGAGTCTTCCACCACATTAT +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNWGPPA*SLPPHY
Trigger: ATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCA...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCCTGAATGCGTTTCTTaGCTGCCTCCACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEPECVS*LPPHSP
Trigger: AGGACTGTGTGGAGGCAGCCAAGAAACGCATTCAGG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGATGGTAATTTGGTCCTaGGGCTGGTTCCCATCGTCC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEMVIWS*GWFPSS
Trigger: GGACGATGGGAACCAGCCCCAGGACCAAATTACCAT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTTTCCTCCACATTCTCTaGGAGCCCCGTCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPFLHIL*EPRHSD
Trigger: GTCACTGTGACGGGGCTCCCAGAGAATGTGGAGGAA...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTTGATCATTATCGTTTaGGGCCCCAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVLIIIV*GPKGGS
Trigger: AGACCCTCCCTTGGGGCCCCAAACGATAATGATCAA...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCAGAACTCATGCAGATaGGGAAGAGGTGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEQNSCR*GRGDSP
Trigger: AGGGCTGTCACCTCTTCCCCATCTGCATGAGTTCTG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGAAAGACAGCTCCAAGTaGGCACCAGTTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEKDSSK*APVLCM
Trigger: CATGCAGAGAACTGGTGCTCACTTGGAGCTGTCTTT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCCAGTGATCTTGATCTaGTTGCTGGGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPPVILI*LLGSSG
Trigger: CCCAGATGACCCCAGCAATCAGATCAAGATCACTGG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCCAATGATTGTGCGATaGAATCTTTGCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTPMIVR*NLCSMI
Trigger: AATCATTGAGCAAAGATTTCATCGCACAATCATTGG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACACGCCTCCTTTCCCAATaGTATTCTTGTGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTRLLSQ*YSCETV
Trigger: AACAGTTTCACAAGAATATCATTGGGAAAGGAGGCG...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGCGCCTCCTTTCCCAATaGTATTCTTGTGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVRLLSQ*YSCETV
Trigger: AACAGTTTCACAAGAATATCATTGGGAAAGGAGGCG...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGATGATAATGGTCTCTaGATTGCTATTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTDDNGL*IAILCW
Trigger: CCAGCAGAGAATAGCAATTCAGAGACCATTATCATC...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCTTCCAGGTCCTCAATaGTCTCCTGAATGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVLPGPQ*SPECVS
Trigger: AGAAACGCATTCAGGAGATCATTGAGGACCTGGAAG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCGATGCGGATCAAATTaGTCTTCTCACTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVRCGSN*SSHCQE
Trigger: CTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGTGAAACTCTTGGTTTaGTTCTCCTCCGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEVKLLV*FSSARC
Trigger: GCATCTGGCGGAGGAGAAGCAAACCAAGAGTTTCAC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGTCCTCAGAAACCATCTaGTCAAGTTCACCCACAATT +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSSSETI*SSSPTI
Trigger: AATTGTGGGTGAACTTGAGCAGATGGTTTCTGAGGA...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGGTTTCATGTATACCTaGAGCGCCTCACTGTCCACC +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPGFMYT*SASLST
Trigger: GGTGGACAGTGAGGCGCTGCAGGTATACATGAAACC...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGTCATGTCATCACCCTTaGAACAACCACCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLSCHHP*NNHPKE
Trigger: TTCCTTTGGGTGGTTGTTGCAAGGGTGATGACATGA...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTATGAGTAAGACTTCATaGCGAGCTTTCTCGATGCCC +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVMSKTS*RAFSMP
Trigger: GGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCAT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTGCCTGTGGAACTTGTaGTCGATGTTGATCTCCACA +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVCLWNL*SMLIST
Trigger: TGTGGAGATCAACATCGACCACAAGTTCCACAGGCA...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTGAATTTGTGGTATTCTaGCTTGGCGCGGATGTCAAC +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVEFVVF*LGADVN
Trigger: GTTGACATCCGCGCCAAGCCAGAATACCACAAATTC...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTGGGGTCCACCAGCATaGAGTCTTCCACCACATTAT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVWGPPA*SLPPHY
Trigger: ATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCCTGAATGCGTTTCTTaGCTGCCTCCACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPPECVS*LPPHSP
Trigger: AGGACTGTGTGGAGGCAGCCAAGAAACGCATTCAGG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGTCCTTATCAGGAAACTaGATGTTCACGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKSLSGN*MFTSCS
Trigger: GGAGCATGACGTGAACATCCAGTTTCCTGATAAGGA...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGATTTGGTCCTGGGGCTaGTTCCCATCGTCCTTATCA +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVIWSWG*FPSSLS
Trigger: TGATAAGGACGATGGGAACCAGCCCCAGGACCAAAT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGTTGATCATTATCGTTTaGGGCCCCAAGGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPELIIIV*GPKGGS
Trigger: AGACCCTCCCTTGGGGCCCCAAACGATAATGATCAA...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAAACCATTGTGTGGTTaGGTTTGGGTCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVKPLCG*VWVSRL
Trigger: CAGCCTGCTGACCCAAACCCAACCACACAATGGTTT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGACAAACAGGACTGTCTaGACCAAGGGAAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPETNRTV*TKGNWQ
Trigger: CTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGATTAAAATTGACCTTTaGGAGAGGGTAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKIKIDL*ERVGAG
Trigger: TCCTGCCCCTACCCTCTCCCAAAGGTCAATTTTAAT...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGACTTCAGTCAACGCCTaGCCTAACTTTTCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPETSVNA*PNFSGS
Trigger: CGAACCTGAAAAGTTAGGTCAGGCGTTGACTGAAGT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR TCA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTCCAATGATTGTGCGATaGAATCTTTGCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPPMIVR*NLCSMI
Trigger: AATCATTGAGCAAAGATTTCATCGCACAATCATTGG...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTATTCCTCCTCCAGATTaGGGATGTGGTCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPIPPPD*GCGRWL
Trigger: AAGCCATCGACCACATCCTCAATCTGGAGGAGGAAT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGTGTCATCCATATTCATaGGCCTTTACACATGTTTGC +
Preference number: 4 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSCHPYS*AFTHVC
Trigger: GCAAACATGTGTAAAGGCTCATGAATATGGATGACA...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGATTCCTCCTCCAGATTaGGGATGTTCACGTCATGCT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVIPPPD*GCSRHA
Trigger: AGCATGACGTGAACATCCTCAATCTGGAGGAGGAAT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373292.8
CDS-3UTR GCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATTTCTTCACTTCCACTaGAATGGTTGTAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAFLHFH*NGCSLL
Trigger: AAGAAGACTACAACCATTGCAGTGGAAGTGAAGAAA...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391975.5
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCGATGCGGATCAAATTaGTCTTCTCACTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVRCGSN*SSHCQE
Trigger: CTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGGGTCGATTTTGGTGTTaGTTTCTTCACGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: EADCTPQTGLSGPRETGRGRFWC*FLHESF
Trigger: AAAAGATTCGTGAAGAAAGCAACACCAAAATCGACC...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACTTGCCAGGTCTTCCTTaGACCCTGACACCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNLPGLP*TLTPVL
Trigger: CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAA...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAGCGATGGTGTTCTTTaGGAATGGCAACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVSDGVL*EWQQLL
Trigger: CAGCAACTGTTGCCATTCCCAAAGAACACCATCGCT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAATGACATACTTGTGTTaGGATTTCTTCACTTCCACT +
Preference number: 4 (lower is better)
Translates to: DVKTRKPETRAPSSALTAMTYLC*DFFTST
Trigger: AGTGGAAGTGAAGAAATCCCAACACAAGTATGTCAT...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391975.5
CDS-3UTR CCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAATTGCTATTCTCTGCTaGAAGGTCGATTTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTIAILC*KVDFGV
Trigger: AACACCAAAATCGACCTTCCAGCAGAGAATAGCAAT...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGACATTATCCAGGTTTTaGATCAAGGCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPETLSRF*IKASSS
Trigger: GGAGCTGGAGGCCTTGATCCAAAACCTGGATAATGT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTTGGGGTCCACCAGCATaGAGTCTTCCACCACATTAT +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPWGPPA*SLPPHY
Trigger: ATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCA...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGATTCTCCTGGACAACTaGCTCTGTACTGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVILLDN*LCTVNC
Trigger: GCAGTTCACAGTACAGAGCCAGTTGTCCAGGAGAAT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGATTCTCCTGGACAACTaGCTCTGTACTGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEILLDN*LCTVNC
Trigger: GCAGTTCACAGTACAGAGCCAGTTGTCCAGGAGAAT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTTGGGTCAGCAGGCTaGAGAGGGTTCTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVFGSAG*RGFCSF
Trigger: AAAAGAACAGAACCCTCTCCAGCCTGCTGACCCAAA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPERQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAGACAAACCATTGTGTaGTTGGGTTTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVRQTIV*LGLGQQ
Trigger: CTGCTGACCCAAACCCAACCACACAATGGTTTGTCT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAACGGAACTCATGGTTaGTCTCACACCTACACACAA +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVNGTHG*SHTYTQ
Trigger: TTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTACTTGTGGTCGATGTTaGTCTCCACATAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPTCGRC*SPHSPS
Trigger: GGATGGACTATGTGGAGATCAACATCGACCACAAGT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCATTCTAATGTCACCTaGGCTTCCAGGTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPHSNVT*ASRSSM
Trigger: CATTGAGGACCTGGAAGCTCAGGTGACATTAGAATG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACACTGGCTCTGTACTGTaGACTGCGTTCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNTGSVL*TAFSSL
Trigger: CAGAGAGGAGAACGCAGTTCACAGTACAGAGCCAGT...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGGGTTCTGTTCTTTTTaGTCATTATCGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEGFCSF*SLSFGA
Trigger: GGCCCCAAACGATAATGATCAAAAAGAACAGAACCC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGGGGTTCTGTTCTTTTTaGTCATTATCGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVGFCSF*SLSFGA
Trigger: GGCCCCAAACGATAATGATCAAAAAGAACAGAACCC...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGTGTCATCCATATTCATaGGCCTTTACACATGTTTGC +
Preference number: 4 (lower is better)
Translates to: PPKGKESAEQFRKGLASKCHPYS*AFTHVC
Trigger: GCAAACATGTGTAAAGGCTCATGAATATGGATGACA...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGATTTTGGCCAGGTTCTaGCCTTTCTTGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEILARF*PFLPMM
Trigger: CATCATTGGCAAGAAAGGGCAGAACCTGGCCAAAAT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGACTCATCCATCATCTTaGGGATCCCACTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVTHPSS*GSHFLS
Trigger: AGAAAGGAAGTGGGATCCGCAAGATGATGGATGAGT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTGATTTGGGTAATTACTaGCCCCTTTCTCCCGATAAT +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVDLGNY*PLSPDN
Trigger: ATTATCGGGAGAAAGGGGGCAGTAATTACCCAAATC...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCTGCAACGGAACTCATaGTTGATCTCACACCTACAC +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPLQRNS*LISHLH
Trigger: GTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTAGCGATGGTGTTCTTTaGGAATGGCAACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPSDGVL*EWQQLL
Trigger: CAGCAACTGTTGCCATTCCCAAAGAACACCATCGCT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTCTGGGCGTGGGATCTaGATTTTGGTTGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVSGRGI*ILVAVF
Trigger: AAAAACTGCAACCAAAATCCAGATCCCACGCCCAGA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGTTAATGATGACCTCTaGGAATTTGTCACGAATTTC +
Preference number: 4 (lower is better)
Translates to: KDVKTRKPETRAPSSALTVNDDL*EFVTNF
Trigger: GAAATTCGTGACAAATTCCCAGAGGTCATCATTAAC...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCCCATGACAGATCGATaGAATTTCTGGGGTATAGCA +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVPMTDR*NFWGIA
Trigger: TGCTATACCCCAGAAATTCCATCGATCTGTCATGGG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTATTCTCCTGGACAACTaGCTCTGTACTGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPILLDN*LCTVNC
Trigger: GCAGTTCACAGTACAGAGCCAGTTGTCCAGGAGAAT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTCCTTATCAGGAAACTaGATGTTCACGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVSLSGN*MFTSCS
Trigger: GGAGCATGACGTGAACATCCAGTTTCCTGATAAGGA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATGTTAAGGCCAAGGGATaGATTGTAGCTATGGAAACA +
Preference number: 4 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNVKAKG*IVAMET
Trigger: TGTTTCCATAGCTACAATCCATCCCTTGGCCTTAAC...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACCTCTGTACTGTGAACTaGGTTCTCCTCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNLCTVN*VLLSVW
Trigger: CCAGACAGAGAGGAGAACGCAGTTCACAGTACAGAG...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGATTTGGGTAATTACTaGCCCCTTTCTCCCGATAAT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEDLGNY*PLSPDN
Trigger: ATTATCGGGAGAAAGGGGGCAGTAATTACCCAAATC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGGATCGATGGAATTTCTaGGGTATAGCACATTCTAAT +
Preference number: 4 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLDRWNF*GIAHSN
Trigger: ATTAGAATGTGCTATACCCCAGAAATTCCATCGATC...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGGATCGGAACAGAAATTaGATAGCTATTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVDRNRN*IAIFHQ
Trigger: CTGGTGGAAAATAGCTATTCAATTTCTGTTCCGATC...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGACGGACACCTTGTACTaGTCTTTGATTCTGTTTATG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVTDTLY*SLILFM
Trigger: CATAAACAGAATCAAAGACCAGTACAAGGTGTCCGT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGATTGCTATTCTCTGCTaGAAGGTCGATTTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEIAILC*KVDFGV
Trigger: AACACCAAAATCGACCTTCCAGCAGAGAATAGCAAT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGATTGCTATTCTCTGCTaGAAGGTCGATTTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVIAILC*KVDFGV
Trigger: AACACCAAAATCGACCTTCCAGCAGAGAATAGCAAT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR TCA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTCTTGTGAAACTGTTTaGAGATCGGAACAGAAATTG +
Preference number: 4 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVSCETV*RSEQKL
Trigger: CAATTTCTGTTCCGATCTTCAAACAGTTTCACAAGA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTCTGCATGTATTTTGTaGATTTTTCCACCTCATTCT +
Preference number: 4 (lower is better)
Translates to: VDQELESVILARMLMTLVSACIL*IFPPHS
Trigger: AGAATGAGGTGGAAAAATGCACAAAATACATGCAGA...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGGTCGATTTTGGTGTTaGTTTCTTCACGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEGRFWC*FLHESF
Trigger: AAAAGATTCGTGAAGAAAGCAACACCAAAATCGACC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGATCGATGGAATTTCTaGGGTATAGCACATTCTAAT +
Preference number: 4 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEDRWNF*GIAHSN
Trigger: ATTAGAATGTGCTATACCCCAGAAATTCCATCGATC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR GCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTTTTAGCTCCAAGTCTTaGAGTTTCTCTCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPFSSKS*SFSPFL
Trigger: CAAAAATGGAGAGAAACTGCAAGACTTGGAGCTAAA...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTATGACATACTTGTGTTaGGATTTCTTCACTTCCACT +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPMTYLC*DFFTST
Trigger: AGTGGAAGTGAAGAAATCCCAACACAAGTATGTCAT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR TCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACGAAATCTTTGCTCAATaGTTAGATCCTTGGTACGCT +
Preference number: 4 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNEIFAQ*LDPWYA
Trigger: AGCGTACCAAGGATCTAATCATTGAGCAAAGATTTC...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR GCA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTTCTGCATGTATTTTGTaGATTTTTCCACCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPSACIL*IFPPHS
Trigger: AGAATGAGGTGGAAAAATGCACAAAATACATGCAGA...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACTGGAAACAGATGATATaGAAGACATCCAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNWKQMI*KTSNKE
Trigger: CTCCTTGTTGGATGTCTTCCATATCATCTGTTTCCA...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR TCA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACTCTTGTGAAACTGTTTaGAGATCGGAACAGAAATTG +
Preference number: 4 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNSCETV*RSEQKL
Trigger: CAATTTCTGTTCCGATCTTCAAACAGTTTCACAAGA...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTCCAGCAGCTCTCGCTaGGCCTGCTGCACGCCCTGT +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLSSSSR*ACCTPC
Trigger: ACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS GCA 90 bp GCACGGCGCTTGCGCAGAGGCGGACAACGCGGACGACTCTGGGCTTaGGCACTCGGAAGCCGGCCGCATGGGGGAGGGGAAGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ARRLRRGGQRGRLWA*ALGSRPHGGGEEGQ
Trigger: CTGGCCTTCTTCCCCTCCCCCATGCGGCCGGCTTCCGAGTGCGCAAGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAAGCGCCGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTCCAGCAGCTCTCGCTaGGCCTGCTGCACGCCCTGT +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHSSSSR*ACCTPC
Trigger: ACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCGGGCAGCTTCGCAGTaGGCTCGCTTGCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLRAASQ*ARLPVM
Trigger: CATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCGCCTCCACACAGTCCTaGGCGCCCTTGAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLASTQS*APLRVT
Trigger: AGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGC...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS CCA 90 bp GGAGGAGCACGGCGCTTGCGCAGAGGCGGACAACGCGGACGACTCTaGGCTTGCGCACTCGGAAGCCGGCCGCATGGGGGAGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: GGARRLRRGGQRGRL*ACALGSRPHGGGEE
Trigger: TTCTTCCCCTCCCCCATGCGGCCGGCTTCCGAGTGCGCAAGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAAGCGCCGTGCTCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCGGGCAGCTTCGCAGTaGGCTCGCTTGCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQRAASQ*ARLPVM
Trigger: CATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGAAGTGGCGGTGGTGCTaGGGGTCCACCAGCATGGAG +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQKWRWC*GSTSME
Trigger: CTCCATGCTGGTGGACCCCAAGCACCACCGCCACTT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACGCCTCCACACAGTCCTaGGCGCCCTTGAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHASTQS*APLRVT
Trigger: AGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGC...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCGCCTCCACACAGTCCTaGGCGCCCTTGAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSASTQS*APLRVT
Trigger: AGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGC...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCCTCTGGAAGGTGCCTaGGCCTCTTCGTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLPLEGA*ASSCAG
Trigger: CCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAGG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTCAGCCTGCCAGCTTTaGCTCGGGCCCCACACCAGA +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQSACQL*LGPHTR
Trigger: TCTGGTGTGGGGCCCGAGCAAAAGCTGGCAGGCTGA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391976.6
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTTGATGGGTCGGATCTaGTTCCCCCAGGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHLMGRI*FPQAPA
Trigger: CGCTGGAGCCTGGGGGAACAAGATCCGACCCATCAA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAGGGAGTTGTGCAGCTaGGCAGGGATGGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLRELCS*AGMETS
Trigger: AGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGATCAGACGGCCCTaGGTGCCAATGAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLRIRRP*VPMREL
Trigger: CAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCG...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCAGTCCTTGGCGCCCTaGAGGGTGACTTTGTCGCTC +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLQSLAP*RVTLSL
Trigger: GAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCAGTCCTTGGCGCCCTaGAGGGTGACTTTGTCGCTC +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQQSLAP*RVTLSL
Trigger: GAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTG...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS GCA 90 bp CCCCAGCCTCTATATGGCCAACTGCCGTGGGAGGAGCACGGCGCTTaGGCAGAGGCGGACAACGCGGACGACTCTGGGCTTGCGCACTCG +
Preference number: 5 (lower is better)
Translates to: PQPLYGQLPWEEHGA*AEADNADDSGLAHS
Trigger: CGAGTGCGCAAGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAAGCGCCGTGCTCCTCCCACGGCAGTTGGCCATATAGAGGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS CCA 90 bp TCAGCTAGCTTGTCCCCTGAAGCTCCTGGCTGGGCCTCAGGCCGGTaGACGTGCCAGGGCGCCTCAGGGCTCCAAGGCCCACAGAGACTC +
Preference number: 5 (lower is better)
Translates to: SASLSPEAPGWASGR*TCQGASGLQGPQRL
Trigger: GAGTCTCTGTGGGCCTTGGAGCCCTGAGGCGCCCTGGCACGTCCACCGGCCTGAGGCCCAGCCAGGAGCTTCAGGGGACAAGCTAGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484412.1
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTGTTCCTGGGCCACATaGACATCCTCTGTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHCSWAT*TSSVGP
Trigger: GGGCCCTACAGAGGATGTCAATGTGGCCCAGGAACA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGAGGGAGTTGTGCAGCTaGGCAGGGATGGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLRELCS*AGMETS
Trigger: AGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCT...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGTGCCAATGAGGGAGTaGTGCAGCTTGGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQVPMRE*CSLAGM
Trigger: CATCCCTGCCAAGCTGCACAACTCCCTCATTGGCAC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGGCCTCCACACAGTCCTaGGCGCCCTTGAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEASTQS*APLRVT
Trigger: AGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGC...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGCCTCTGGAAGGTGCCTaGGCCTCTTCGTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEPLEGA*ASSCAG
Trigger: CCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAGG...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS GCA 90 bp AGCTTGTCCCCTGAAGCTCCTGGCTGGGCCTCAGGCCGGTGGACGTaGCAGGGCGCCTCAGGGCTCCAAGGCCCACAGAGACTCACGTAT +
Preference number: 5 (lower is better)
Translates to: SLSPEAPGWASGRWT*QGASGLQGPQRLTY
Trigger: ATACGTGAGTCTCTGTGGGCCTTGGAGCCCTGAGGCGCCCTGGCACGTCCACCGGCCTGAGGCCCAGCCAGGAGCTTCAGGGGACAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484412.1
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACGAGAGGCCTTGGTCTTaGGCCAAAGACAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHERPWS*AKDSSK
Trigger: CTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCTC...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTCGCAGTTGGCTCGCTaGCCTGTGATGATAATGGTC +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLSQLAR*PVMIMV
Trigger: GACCATTATCATCACAGGCAAGCGAGCCAACTGCGA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGATCAGGTCCTGGTCCTaGTCCTCAGCCGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEIRSWS*SSAAGK
Trigger: CTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGAT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCGTGATGACAGAAGCCTaGATGGGTCGGATCTTGTTC +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLVMTEA*MGRILF
Trigger: GAACAAGATCCGACCCATCAAGGCTTCTGTCATCAC...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTTCTCGATGCCCTCTTaGGTGCCAGTGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLFSMPS*VPVILI
Trigger: GATCAAGATCACTGGCACCAAAGAGGGCATCGAGAA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCATCTCCTGCAATGAATaGCCCTTGGGCCCAATGACA +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLISCNE*PLGPMT
Trigger: TGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGAT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR CAA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGTCGCAGTTGGCTCGCTaGCCTGTGATGATAATGGTC +
Preference number: 5 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLSQLAR*PVMIMV
Trigger: GACCATTATCATCACAGGCAAGCGAGCCAACTGCGA...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCGGGCAGCTTCGCAGTaGGCTCGCTTGCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERRAASQ*ARLPVM
Trigger: CATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTCAACAGTGAAACTCTaGGTTTGCTTCTCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLSTVKL*VCFSSA
Trigger: GGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTTGA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTTGTGGTATTCTGGCTaGGCGCGGATGTCAACAGTG +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLLWYSG*ARMSTV
Trigger: CACTGTTGACATCCGCGCCAAGCCAGAATACCACAA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCACATTATCCAGGTTTaGGATCAAGGCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLHIIQV*DQGLQL
Trigger: GAGCTGGAGGCCTTGATCCAAAACCTGGATAATGTG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGAAGTGGCGGTGGTGCTaGGGGTCCACCAGCATGGAG +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERKWRWC*GSTSME
Trigger: CTCCATGCTGGTGGACCCCAAGCACCACCGCCACTT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTCCAGCAGTCCAGCCTaGGCCCGGTCCAAATTTGCA +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEESSSPA*ARSKFA
Trigger: TGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAATTCGTCCATGATTTaGCGAATGGCTTTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLNSSMI*RMALPR
Trigger: CCGCGGCAAAGCCATTCGCAAAATCATGGACGAATT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTTTGATCATTATCGTTaGGGGCCCCAAGGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLFDHYR*GPQGRV
Trigger: GACCCTCCCTTGGGGCCCCAAACGATAATGATCAAA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCTTTGATCATTATCGTTaGGGGCCCCAAGGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSFDHYR*GPQGRV
Trigger: GACCCTCCCTTGGGGCCCCAAACGATAATGATCAAA...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp TTGGCCCTGGGACCCAGAAGTGGTGAGAGGGAAGGCCACCCGCCGTaGAGGGAAGTCAGTGCCCAGTCCGAGCAGGAGGAGGCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LALGPRSGEREGHPP*REVSAQSEQEEAES
Trigger: TGACTCTGCCTCCTCCTGCTCGGACTGGGCACTGACTTCCCTTCACGGCGGGTGGCCTTCCCTCTCACCACTTCTGGGTCCCAGGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTTCTCGATGCCCTCTTaGGTGCCAGTGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLFSMPS*VPVILI
Trigger: GATCAAGATCACTGGCACCAAAGAGGGCATCGAGAA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCTCTCCACAGCACGTTaGTCCTGCTCGGCAGAGATG +
Preference number: 5 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGLSTAR*SCSAEM
Trigger: CATCTCTGCCGAGCAGGACAAACGTGCTGTGGAGAG...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACATCTCCTGCAATGAATaGCCCTTGGGCCCAATGACA +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHISCNE*PLGPMT
Trigger: TGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGAT...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR CAA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTCCCTCCAGGGTGATCTaGTCTTCGCCCTCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAPSRVI*SSPSVN
Trigger: GTTCACAGAGGGCGAAGACAAGATCACCCTGGAGGG...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCCTCCAGGGTGATCTaGTCTTCGCCCTCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGPSRVI*SSPSVN
Trigger: GTTCACAGAGGGCGAAGACAAGATCACCCTGGAGGG...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCATGCGCACGGACACCTaGTACTGGTCTTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLMRTDT*YWSLIL
Trigger: CAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCAT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTCGATGCGGATCAAATaGCTCTTCTCACTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLSMRIK*LFSLSG
Trigger: TCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTCAACAGTGAAACTCTaGGTTTGCTTCTCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHSTVKL*VCFSSA
Trigger: GGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTTGA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTAAGTGGCGGTGGTGCTaGGGGTCCACCAGCATGGAG +
Preference number: 5 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSKWRWC*GSTSME
Trigger: CTCCATGCTGGTGGACCCCAAGCACCACCGCCACTT...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGGCCTCCAGAGCTTCCTaGGCAGCCTCACACTTTTCT +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEASRAS*AASHFS
Trigger: AGAAAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGC...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAACTCATCCATCATCTaGCGGATCCCACTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLNSSII*RIPLPF
Trigger: GAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCATGCTCCAACCGGATTaGGGTAATTACTGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLMLQPD*GNYCPL
Trigger: AAGGGGGCAGTAATTACCCAAATCCGGTTGGAGCAT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGTCATGTCATCACCCTaGCAACAACCACCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLVMSSP*QQPPKG
Trigger: TCCTTTGGGTGGTTGTTGCAAGGGTGATGACATGAC...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS GCA 90 bp GCAGCTCTCGCTTGGCCTGCTGCACGCCCTGTGGGTCCCCCTCGATaGGGATCAAATTGCTCTTCTCACTGTCAGGAGGGATGCGCACGG +
Preference number: 5 (lower is better)
Translates to: AALAWPAARPVGPPR*GSNCSSHCQEGCAR
Trigger: CCGTGCGCATCCCTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS GCA 90 bp AAGTGGCCTCCCCAAACTCTGTGTCCAGCCGAGAAGCACAGCCCGTaGGCACACGGTAGGAGCAAGAGGGCTACCTCCACTGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: KWPPQTLCPAEKHSP*AHGRSKRATSTATA
Trigger: GGCAGTGGCAGTGGAGGTAGCCCTCTTGCTCCTACCGTGTGCGCACGGGCTGTGCTTCTCGGCTGGACACAGAGTTTGGGGAGGCCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCCAACGGAACTCATGGTaGATCTCACACCTACACACA +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLQRNSW*ISHLHT
Trigger: TGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTG...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCTCTCCACAGCACGTTaGTCCTGCTCGGCAGAGATG +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERLSTAR*SCSAEM
Trigger: CATCTCTGCCGAGCAGGACAAACGTGCTGTGGAGAG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTGCAATGAATTGCCCTaGGGCCCAATGACATACTTG +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLCNELP*GPMTYL
Trigger: CAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTGCAATGAATTGCCCTaGGGCCCAATGACATACTTG +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQCNELP*GPMTYL
Trigger: CAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTGTTCCTGGGCCACATaGACATCCTCTGTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERCSWAT*TSSVGP
Trigger: GGGCCCTACAGAGGATGTCAATGTGGCCCAGGAACA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGAGGTGCCTGTGGAACTaGTGGTCGATGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEERCLWN*WSMLIS
Trigger: GGAGATCAACATCGACCACAAGTTCCACAGGCACCT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACTCGATGCGGATCAAATaGCTCTTCTCACTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHSMRIK*LFSLSG
Trigger: TCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGA...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTCAGTCCTTGGCGCCCTaGAGGGTGACTTTGTCGCTC +
Preference number: 5 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSQSLAP*RVTLSL
Trigger: GAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTG...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTCCAGCAGTCCAGCCTaGGCCCGGTCCAAATTTGCA +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERSSSPA*ARSKFA
Trigger: TGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS CCA 90 bp CTGACCATCACCCCGCCATACTCTTCAGCAATCTCCCGCAAGACCTaGCCTCTGCGGATGACGAAGTGGCGGTGGTGCTTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: LTITPPYSSAISRKT*PLRMTKWRWCLGST
Trigger: GGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGCTGAAGAGTATGGCGGGGTGATGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CCA 90 bp TGCAGAGCTCAAGGTCGTGTCACAGTGAAAGCCAGGCTGCTCACCTaGGGCTCAGAGGCACGCTCTCCCCAAACCTGGGCACCTGCACTG +
Preference number: 5 (lower is better)
Translates to: CRAQGRVTVKARLLT*GSEARSPQTWAPAL
Trigger: CAGTGCAGGTGCCCAGGTTTGGGGAGAGCGTGCCTCTGAGCCCCAGGTGAGCAGCCTGGCTTTCACTGTGACACGACCTTGAGCTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAACTGGTTCATATCCTaGTATTTTCTCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLNWFIS*YFLSSR
Trigger: CCTGGAGGAGAGAAAATACAAGGATATGAACCAGTT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTTGATTCTGTTTATGTaGGCACCGCTCTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLLILFM*APLFPM
Trigger: CATTGGGAAGAGCGGTGCCAACATAAACAGAATCAA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTTGATTCTGTTTATGTaGGCACCGCTCTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQLILFM*APLFPM
Trigger: CATTGGGAAGAGCGGTGCCAACATAAACAGAATCAA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGATGCGCACGGACACCTaGTACTGGTCTTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEMRTDT*YWSLIL
Trigger: CAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCAT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp TGCACCCTGACACCTGTGCTGAGGCGCTCTGGCAGCTGGAGGAGGCTGATTGCACGGATCAGACGGCCCTaGGTGCCAATGAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: CTLTPVLRRSGSWRRLIARIRRP*VPMREL
Trigger: CAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCG...TGCAATCAGCCTCCTCCAGCTGCCAGAGCGCCTCAGCACAGGTGTCAGGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCAAGTGGCGGTGGTGCTaGGGGTCCACCAGCATGGAG +
Preference number: 5 (lower is better)
Translates to: QGLSASSGVVCILLYLMLKWRWC*GSTSME
Trigger: CTCCATGCTGGTGGACCCCAAGCACCACCGCCACTT...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTTTCTCCCGATAATCTaGGGATGGTATTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQFLPII*GWYLGS
Trigger: AGACCCCAAATACCATCCCAAGATTATCGGGAGAAA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTTTCTCCCGATAATCTaGGGATGGTATTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLFLPII*GWYLGS
Trigger: AGACCCCAAATACCATCCCAAGATTATCGGGAGAAA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTATTTTGCGAATGGCTTaGCCGCGGGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPAILRMA*PRAPMM
Trigger: CATCATTGGTGCCCGCGGCAAAGCCATTCGCAAAAT...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAAGCGAATGTCCACCTaGAATTCGTCCATGATTTTG +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLKRMST*NSSMIL
Trigger: CAAAATCATGGACGAATTCAAGGTGGACATTCGCTT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp TGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCCTCTGGAAGGTGCCTaGGCCTCTTCGTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CAERGHGFRRGCSPTRKQPLEGA*ASSCAG
Trigger: CCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAGG...CTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS TCA 90 bp TGGGAGAACAGCCATGGGTTTGCAGAGCTCAAGGTCGTGTCACAGTaGAAGCCAGGCTGCTCACCTGGGGCTCAGAGGCACGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: WENSHGFAELKVVSQ*KPGCSPGAQRHALP
Trigger: GGGGAGAGCGTGCCTCTGAGCCCCAGGTGAGCAGCCTGGCTTTCACTGTGACACGACCTTGAGCTCTGCAAACCCATGGCTGTTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS GCA 90 bp CTCCTTCACACGCTCCAGCAGTCCAGCCTTGGCCCGGTCCAAATTTaGAGCGAGGCCCGTGATGGCGATGATGTCAGACTGCAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LLHTLQQSSLGPVQI*SEARDGDDVRLQLR
Trigger: CCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGAGCGTGTGAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000470482.5
ENST00000487169.5
CDS GCA 90 bp ATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATaGTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTGCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: MSGACAERGHGFRRG*SPTRKQLPTQLPPS
Trigger: TGAGGGTGGCAACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442730.1
ENST00000487169.5
CDS GCA 90 bp GCACTGAGAGCAGCATCCAGTACGCAGGTGGCACTCGACACTGACTaGACACAAGGTGAGCTAGGCCTGATAACCCCACTCACGCGGGGG +
Preference number: 5 (lower is better)
Translates to: ALRAASSTQVALDTD*TQGELGLITPLTRG
Trigger: CCCCCGCGTGAGTGGGGTTATCAGGCCTAGCTCACCTTGTGTGCAGTCAGTGTCGAGTGCCACCTGCGTACTGGATGCTGCTCTCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS CCA 90 bp CTTGACGTTCAGGACCCCAGAGAACAGGAAAGAGTCCATTGGCCCTaGGACCCAGAAGTGGTGAGAGGGAAGGCCACCCGCCGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: LDVQDPREQERVHWP*DPEVVRGKATRREG
Trigger: CCCTTCACGGCGGGTGGCCTTCCCTCTCACCACTTCTGGGTCCCAGGGCCAATGGACTCTTTCCTGTTCTCTGGGGTCCTGAACGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS-3UTR CAA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCTTGATGGGTCGGATCTaGTTCCCCCAGGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: QGLSASSGVVCILLYLMLLMGRI*FPQAPA
Trigger: CGCTGGAGCCTGGGGGAACAAGATCCGACCCATCAA...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGAACTGGTTCATATCCTaGTATTTTCTCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQNWFIS*YFLSSR
Trigger: CCTGGAGGAGAGAAAATACAAGGATATGAACCAGTT...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGAAGCGATGGTGTTCTTaGGGAATGGCAACAGTTGCT +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEKRWCS*GMATVA
Trigger: AGCAACTGTTGCCATTCCCAAAGAACACCATCGCTT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACGGATCTGGATTTTGGTaGCAGTTTTTAGCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHGSGFW*QFLAPS
Trigger: ACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCC...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCGGTTAATCAAATCTTaGACCATGCCTTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLRLIKS*TMPSIC
Trigger: ACAGATAGAAGGCATGGTCAAAGATTTGATTAACCG...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTCGATGCGGATCAAATaGCTCTTCTCACTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEESMRIK*LFSLSG
Trigger: TCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTCAATGATTAGATCCTaGGTACGCTCATTTTCCATG +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLSMIRS*VRSFSM
Trigger: CATGGAAAATGAGCGTACCAAGGATCTAATCATTGA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGGACAATGTCACTTTTTaGTGCTGGGTCTGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: HGQAWRSGRTHSQALGSLDNVTF*CWVWKV
Trigger: AACTTTCCAGACCCAGCACAAAAAAGTGACATTGTC...CAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGACAATGTCACTTTTTaGTGCTGGGTCTGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQDNVTF*CWVWKV
Trigger: AACTTTCCAGACCCAGCACAAAAAAGTGACATTGTC...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp ACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGATGCTCCAACCGGATTaGGGTAATTACTGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: TAGWPVGGVEVPTPTPDGMLQPD*GNYCPL
Trigger: AAGGGGGCAGTAATTACCCAAATCCGGTTGGAGCAT...CCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCAAGCGAATGTCCACCTaGAATTCGTCCATGATTTTG +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLKRMST*NSSMIL
Trigger: CAAAATCATGGACGAATTCAAGGTGGACATTCGCTT...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGAAAACTGCCAGTCACCCGGGACCTGCTCCTAGGGGCTGGCCTGCACAGCCGTTTGATCATTATCGTTaGGGGCCCCAAGGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: VKTASHPGPAPRGWPAQPFDHYR*GPQGRV
Trigger: GACCCTCCCTTGGGGCCCCAAACGATAATGATCAAA...CGGCTGTGCAGGCCAGCCCCTAGGAGCAGGTCCCGGGTGACTGGCAGTTTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGGTTCTGTTCTTTTaGATCATTATCGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHRVLFF*IIIVWG
Trigger: GCCCCAAACGATAATGATCAAAAAGAACAGAACCCT...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGGGCTGGCCTGCACAGCCGGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCAGGGTTCTGTTCTTTTaGATCATTATCGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GAGLHSRMACGRGGSAHSRVLFF*IIIVWG
Trigger: GCCCCAAACGATAATGATCAAAAAGAACAGAACCCT...GGAGTGGGCACTTCCACCCCGCCCACAGGCCATCCGGCTGTGCAGGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGTATTCCTCCTCCAGATaGAGGATGTTCACGTCATGC +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEEYSSSR*RMFTSC
Trigger: GCATGACGTGAACATCCTCAATCTGGAGGAGGAATA...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373292.8
CDS-3UTR CAA 90 bp TGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACAGCTTCCGACGCAGTaGCCACCCTCAGGACACCAA +
Preference number: 5 (lower is better)
Translates to: CQEPVQREDTASGGDAPQQLPTQ*PPSGHQ
Trigger: TTGGTGTCCTGAGGGTGGCAACTGCGTCGGAAGCTG...TTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS TCA 90 bp CTCCACATCCGAGGAAGGGCCCCTGATAACAACGGTGTCGCTTCCTaGACCTTCCACGGGAAAGTGAATGTGGACCCCGCCGCACTCCTC +
Preference number: 5 (lower is better)
Translates to: LHIRGRAPDNNGVAS*TFHGKVNVDPAALL
Trigger: GAGGAGTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGTTATCAGGGGCCCTTCCTCGGATGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS TCA 90 bp CGCCATACTCTTCAGCAATCTCCCGCAAGACCTGGCCTCTGCGGATaGCGAAGTGGCGGTGGTGCTTGGGGTCCACCAGCATGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: RHTLQQSPARPGLCG*RSGGGAWGPPAWSL
Trigger: AAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGCTGAAGAGTATGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS TCA 90 bp GTCAGTGCCCAGTCCGAGCAGGAGGAGGCAGAGTCAACAGGAAGTTaGGAAAGGACACTGGCACTCGGGAGAGGATGCGACAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: VSAQSEQEEAESTGS*ERTLALGRGCDRPL
Trigger: GAGTGGCCTGTCGCATCCTCTCCCGAGTGCCAGTGTCCTTTCTCAACTTCCTGTTGACTCTGCCTCCTCCTGCTCGGACTGGGCACTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS GCA 90 bp TGGCCTGCTGCACGCCCTGTGGGTCCCCCTCGATGCGGATCAAATTaGTCTTCTCACTGTCAGGAGGGATGCGCACGGACACCTTGTACT +
Preference number: 5 (lower is better)
Translates to: WPAARPVGPPRCGSN*SSHCQEGCARTPCT
Trigger: AGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS GCA 90 bp ATCTCCCGCAAGACCTGGCCTCTGCGGATGACGAAGTGGCGGTGGTaGTTGGGGTCCACCAGCATGGAGTCTTCCACCACATTATCCAGG +
Preference number: 5 (lower is better)
Translates to: ISRKTWPLRMTKWRW*LGSTSMESSTTLSR
Trigger: CCTGGATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CCA 90 bp GCCTTGATGGGTCGGATCTTGTTCCCCCAGGCTCCAGCGGGTTCCTaGGCACTTTCCAGGCAAGCAGCTTTCTCAGGAAGTGGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: ALMGRILFPQAPAGS*ALSRQAAFSGSGGK
Trigger: CTTCCCTCCACTTCCTGAGAAAGCTGCTTGCCTGGAAAGTGCCCAGGAACCCGCTGGAGCCTGGGGGAACAAGATCCGACCCATCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000413241.5
ENST00000422933.5
ENST00000423693.5
ENST00000425989.5
ENST00000426343.5
ENST00000427183.6
ENST00000428482.5
ENST00000430918.5
ENST00000441124.5
ENST00000442714.5
ENST00000444092.5
ENST00000449864.5
ENST00000452065.5
CDS CCA 90 bp AGATGCAAGCTCCAGCAGCTCTCGCTTGGCCTGCTGCACGCCCTGTaGGTCCCCCTCGATGCGGATCAAATTGCTCTTCTCACTGTCAGG +
Preference number: 5 (lower is better)
Translates to: RCKLQQLSLGLLHAL*VPLDADQIALLTVR
Trigger: CCTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CCA 90 bp GCCTCTCGGACGGCGTCCTCCTTTCCAATGATGGTGATCAGGTCCTaGTCCTTGTCCTCAGCCGCAGGGAAGATGACACGTGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: ASRTASSFPMMVIRS*SLSSAAGKMTRAPV
Trigger: CACTGGAGCACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGATCACCATCATTGGAAAGGAGGACGCCGTCCGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000459788.1
ENST00000479169.5
ENST00000487169.5
CDS CCA 90 bp GCAATCTCCCGCAAGACCTGGCCTCTGCGGATGACGAAGTGGCGGTaGTGCTTGGGGTCCACCAGCATGGAGTCTTCCACCACATTATCC +
Preference number: 5 (lower is better)
Translates to: AISRKTWPLRMTKWR*CLGSTSMESSTTLS
Trigger: GGATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CCA 90 bp TCTTCAGCAATCTCCCGCAAGACCTGGCCTCTGCGGATGACGAAGTaGCGGTGGTGCTTGGGGTCCACCAGCATGGAGTCTTCCACCACA +
Preference number: 5 (lower is better)
Translates to: SSAISRKTWPLRMTK*RWCLGSTSMESSTT
Trigger: TGTGGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CCA 90 bp CTTGGCGCCCTTGAGGGTGACTTTGTCGCTCTGTGTGCCAGAGCGTaGGAAGCTGACCATCACCCCGCCATACTCTTCAGCAATCTCCCG +
Preference number: 5 (lower is better)
Translates to: LGALEGDFVALCARA*EADHHPAILFSNLP
Trigger: CGGGAGATTGCTGAAGAGTATGGCGGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CCA 90 bp CCGAGCAGGAGGAGGCAGAGTCAACAGGAAGTTGAGAAAGGACACTaGCACTCGGGAGAGGATGCGACAGGCCACTCCTGTGACATGGCC +
Preference number: 5 (lower is better)
Translates to: PSRRRQSQQEVEKGH*HSGEDATGHSCDMA
Trigger: GGCCATGTCACAGGAGTGGCCTGTCGCATCCTCTCCCGAGTGCCAGTGTCCTTTCTCAACTTCCTGTTGACTCTGCCTCCTCCTGCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTTCTCGATGCCCTCTTaGGTGCCAGTGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERFSMPS*VPVILI
Trigger: GATCAAGATCACTGGCACCAAAGAGGGCATCGAGAA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATCCAGCAGCTCTCGCTaGGCCTGCTGCACGCCCTGT +
Preference number: 5 (lower is better)
Translates to: DVKTRKPETRAPSSALTASSSSR*ACCTPC
Trigger: ACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGA...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGTCAATGATTAGATCCTaGGTACGCTCATTTTCCATG +
Preference number: 5 (lower is better)
Translates to: GAGPERARPGLEERPHTQSMIRS*VRSFSM
Trigger: CATGGAAAATGAGCGTACCAAGGATCTAATCATTGA...CTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCTCTTCTGCATGTATTTaGTGCATTTTTCCACCTCAT +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLSSACI*CIFPPH
Trigger: ATGAGGTGGAAAAATGCACAAAATACATGCAGAAGA...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCAGATCGGAACAGAAATaGAATAGCTATTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: RARPGLEERPHTQPGARLRSEQK*NSYFPP
Trigger: TGGTGGAAAATAGCTATTCAATTTCTGTTCCGATCT...GAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCCGCACACACAGGTCGATTTTGGTGTaGCTTTCTTCACGAATCTTT +
Preference number: 5 (lower is better)
Translates to: VEQVLSGHGQAWRSGRTHRSILV*LSSRIF
Trigger: AAAGATTCGTGAAGAAAGCAACACCAAAATCGACCT...GTGTGTGCGGCCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCGTGCCAATGAGGGAGTaGTGCAGCTTGGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: QGLSASSGVVCILLYLMLVPMRE*CSLAGM
Trigger: CATCCCTGCCAAGCTGCACAACTCCCTCATTGGCAC...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACATCAGGTCCTGGTCCTaGTCCTCAGCCGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDIRSWS*SSAAGK
Trigger: CTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGAT...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GGATGGCCTGTGGGCGGGGTGGAAGTGCCCACTCCCACTCCAGATGGGCCTGCTAACTCATCCATCATCTaGCGGATCCCACTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: GWPVGGVEVPTPTPDGPANSSII*RIPLPF
Trigger: GAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTT...AGCAGGCCCATCTGGAGTGGGAGTGGGCACTTCCACCCCGCCCACAGGCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp GAAAGGACACTGGCACTCGGGAGAGGATGCGACAGGCCACTCCTGTaGCATGGCCTCCCGGGAAAGGGGTCTACCTCAAACTCATCCATC +
Preference number: 5 (lower is better)
Translates to: ERTLALGRGCDRPLL*HGLPGKGSTSNSSI
Trigger: GATGGATGAGTTTGAGGTAGACCCCTTTCCCGGGAGGCCATGTCACAGGAGTGGCCTGTCGCATCCTCTCCCGAGTGCCAGTGTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS GCA 90 bp TTTTCCATGCGAGATGCAAGCTCCAGCAGCTCTCGCTTGGCCTGCTaGACGCCCTGTGGGTCCCCCTCGATGCGGATCAAATTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: FSMRDASSSSSRLAC*TPCGSPSMRIKLLF
Trigger: GAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS GCA 90 bp TCATTTTCCATGCGAGATGCAAGCTCCAGCAGCTCTCGCTTGGCCTaGTGCACGCCCTGTGGGTCCCCCTCGATGCGGATCAAATTGCTC +
Preference number: 5 (lower is better)
Translates to: SFSMRDASSSSSRLA*CTPCGSPSMRIKLL
Trigger: GAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS GCA 90 bp ATGATGGAGCGGATCAGACGGCCCTTGGTGCCAATGAGGGAGTTGTaGAGCTTGGCAGGGATGGAGACCTCTACCTCGGCTATGTTGGCC +
Preference number: 5 (lower is better)
Translates to: MMERIRRPLVPMREL*SLAGMETSTSAMLA
Trigger: GGCCAACATAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTCCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS GCA 90 bp GTTAGCCTGACACCACGTGCCTTCTCCTCCGCCAGATGCAGGAGCTaGTTCTTGGCCTTCTCCACATCCGAGGAAGGGCCCCTGATAACA +
Preference number: 5 (lower is better)
Translates to: VSLTPRAFSSARCRS*FLAFSTSEEGPLIT
Trigger: TGTTATCAGGGGCCCTTCCTCGGATGTGGAGAAGGCCAAGAAGCAGCTCCTGCATCTGGCGGAGGAGAAGGCACGTGGTGTCAGGCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS GCA 90 bp TGCAGCGAGGCCCGTGATGGCGATGATGTCAGACTGCAGCTCAGGTaGCGGGACATGTATGTTCACCTACGTGAAGAGGGGGCTGACTCA +
Preference number: 5 (lower is better)
Translates to: CSEARDGDDVRLQLR*RDMYVHLREEGADS
Trigger: TGAGTCAGCCCCCTCTTCACGTAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470482.5
CDS GCA 90 bp TGCAGCGAGGCCCGTGATGGCGATGATGTCAGACTGCAGCTCAGGTaGCGGGACATGTATGTTCACCTACGTGAAGAGGGGGCTGACTTG +
Preference number: 5 (lower is better)
Translates to: CSEARDGDDVRLQLR*RDMYVHLREEGADL
Trigger: CAAGTCAGCCCCCTCTTCACGTAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS CCA 90 bp TACGCTCATTTTCCATGCGAGATGCAAGCTCCAGCAGCTCTCGCTTaGCCTGCTGCACGCCCTGTGGGTCCCCCTCGATGCGGATCAAAT +
Preference number: 5 (lower is better)
Translates to: YAHFPCEMQAPAALA*PAARPVGPPRCGSN
Trigger: ATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAATGAGCGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CCA 90 bp CAGGAAAGAGCCTCACCAGTATGTGCGACAGCCCCGCCTCTCACATaGGAGGCGCCACTATTAACAAGCAGAGCAGGGCTAATGGGGGAC +
Preference number: 5 (lower is better)
Translates to: QERASPVCATAPPLT*EAPLLTSRAGLMGD
Trigger: GTCCCCCATTAGCCCTGCTCTGCTTGTTAATAGTGGCGCCTCCCATGTGAGAGGCGGGGCTGTCGCACATACTGGTGAGGCTCTTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS CCA 90 bp GGGACACCCGAGGATGAGGCTGCACGCTCCTCATCGCCTTGGGACTaGCTACCTTGTGTGTCTCTAGGACCTATGAAGGTCACCTGGTCA +
Preference number: 5 (lower is better)
Translates to: GTPEDEAARSSSPWD*LPCVSLGPMKVTWS
Trigger: TGACCAGGTGACCTTCATAGGTCCTAGAGACACACAAGGTAGCCAGTCCCAAGGCGATGAGGAGCGTGCAGCCTCATCCTCGGGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS CCA 90 bp GAACTCGGGACACCCGAGGATGAGGCTGCACGCTCCTCATCGCCTTaGGACTGGCTACCTTGTGTGTCTCTAGGACCTATGAAGGTCACC +
Preference number: 5 (lower is better)
Translates to: ELGTPEDEAARSSSP*DWLPCVSLGPMKVT
Trigger: GGTGACCTTCATAGGTCCTAGAGACACACAAGGTAGCCAGTCCCAAGGCGATGAGGAGCGTGCAGCCTCATCCTCGGGTGTCCCGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS-3UTR CAA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCGGCAACTTTGATTTGTaGCGGAACCAGCCCACTTCG +
Preference number: 5 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLGNFDL*RNQPTS
Trigger: CGAAGTGGGCTGGTTCCGCAACAAATCAAAGTTGCC...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGAAGCGATGGTGTTCTTaGGGAATGGCAACAGTTGCT +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERKRWCS*GMATVA
Trigger: AGCAACTGTTGCCATTCCCAAAGAACACCATCGCTT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCTGGAGGAGCGGCCGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCTCTTCTGCATGTATTTaGTGCATTTTTCCACCTCAT +
Preference number: 5 (lower is better)
Translates to: AWRSGRTHSQALGSLRDLSSACI*CIFPPH
Trigger: ATGAGGTGGAAAAATGCACAAAATACATGCAGAAGA...GAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCGGCCGCTCCTCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACAGGGAGTTGTGCAGCTaGGCAGGGATGGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDRELCS*AGMETS
Trigger: AGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCT...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGATCAGGTCCTGGTCCTaGTCCTCAGCCGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTIRSWS*SSAAGK
Trigger: CTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGAT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAATTCGTCCATGATTTaGCGAATGGCTTTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: GACAERGHGFRRGCSPTRNSSMI*RMALPR
Trigger: CCGCGGCAAAGCCATTCGCAAAATCATGGACGAATT...GCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CAA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACCTCTGGAAGGTGCCTaGGCCTCTTCGTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: DVKTRKPETRAPSSALTAPLEGA*ASSCAG
Trigger: CCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAGG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp CCCCTGATAACAACGGTGTCGCTTCCTGAACCTTCCACGGGAAAGTaGATGTGGACCCCGCCGCACTCCTCCATGATGGAGCGGATCAGA +
Preference number: 5 (lower is better)
Translates to: PLITTVSLPEPSTGK*MWTPPHSSMMERIR
Trigger: TCTGATCCGCTCCATCATGGAGGAGTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGTTATCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS TCA 90 bp ACCGCTGGGCGGCTGAACCAGAAGAAGGGTTGTTGTGCTGGGCTCTaGCCTACAACAGAATGTGGACCTCGGGGTCTCTGCAGCGCTTAT +
Preference number: 5 (lower is better)
Translates to: TAGRLNQKKGCCAGL*PTTECGPRGLCSAY
Trigger: ATAAGCGCTGCAGAGACCCCGAGGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS GCA 90 bp ACCCCACATAACCGCTGGGCGGCTGAACCAGAAGAAGGGTTGTTGTaGTGGGCTCTGACCTACAACAGAATGTGGACCTCGGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TPHNRWAAEPEEGLL*WALTYNRMWTSGSL
Trigger: CAGAGACCCCGAGGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS CCA 90 bp TTCCTTCTCTCCAGTGAAGACAATCTCTGTCCGGTTCACGCTGGGTaGGGGGATGTTGATGCGCGTGCCTGTCTCCTGCATGATCTCGCC +
Preference number: 5 (lower is better)
Translates to: FLLSSEDNLCPVHAG*GDVDARACLLHDLA
Trigger: GGCGAGATCATGCAGGAGACAGGCACGCGCATCAACATCCCCCCACCCAGCGTGAACCGGACAGAGATTGTCTTCACTGGAGAGAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000453141.5
ENST00000470710.1
CDS CCA 90 bp TCTCCTGCATGGCTGGATCATCTTTCCCGTACCCCACATAACCGCTaGGCGGCTGAACCAGAAGAAGGGTTGTTGTGCTGGGCTCTGACC +
Preference number: 5 (lower is better)
Translates to: SPAWLDHLSRTPHNR*AAEPEEGLLCWALT
Trigger: GGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATGTGGGGTACGGGAAAGATGATCCAGCCATGCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441124.5
ENST00000490697.1
CDS CCA 90 bp CCACATAACCGCTGGGCGGCTGAACCAGAAGAAGGGTTGTTGTGCTaGGCTCTGACCTACAACAGAATGTGGACCTCGGGGTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PHNRWAAEPEEGLLC*ALTYNRMWTSGSLQ
Trigger: CTGCAGAGACCCCGAGGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS CCA 90 bp CACCTCTACTTCAATGGTGACAGGAACCAATGCCTGCAGGGAGGATaGTCATGGTTAGGCCGTGGGAGCTCCAGAGCTTCCTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: HLYFNGDRNQCLQGG*SWLGRGSSRASLAA
Trigger: GGCTGCCAAGGAAGCTCTGGAGCTCCCACGGCCTAACCATGACCATCCTCCCTGCAGGCATTGGTTCCTGTCACCATTGAAGTAGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483086.1
CDS CCA 90 bp GACACTGGCACTCGGGAGAGGATGCGACAGGCCACTCCTGTGACATaGCCTCCCGGGAAAGGGGTCTACCTCAAACTCATCCATCATCTT +
Preference number: 5 (lower is better)
Translates to: DTGTRERMRQATPVT*PPGKGVYLKLIHHL
Trigger: AAGATGATGGATGAGTTTGAGGTAGACCCCTTTCCCGGGAGGCCATGTCACAGGAGTGGCCTGTCGCATCCTCTCCCGAGTGCCAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGAGTTTCTCTCCATTTTaGCCAATAACAAAGCGATGG +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEESFSPF*PITKRW
Trigger: CCATCGCTTTGTTATTGGCAAAAATGGAGAGAAACT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCAAGGTGCCTGTGGAACTaGTGGTCGATGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAARCLWN*WSMLIS
Trigger: GGAGATCAACATCGACCACAAGTTCCACAGGCACCT...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTTGATTCTGTTTATGTaGGCACCGCTCTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERLILFM*APLFPM
Trigger: CATTGGGAAGAGCGGTGCCAACATAAACAGAATCAA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCATGCGCACGGACACCTaGTACTGGTCTTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLMRTDT*YWSLIL
Trigger: CAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCAT...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCTCGCAGTTGGCTCGCTaGCCTGTGATGATAATGGTC +
Preference number: 5 (lower is better)
Translates to: QGLSASSGVVCILLYLMLSQLAR*PVMIMV
Trigger: GACCATTATCATCACAGGCAAGCGAGCCAACTGCGA...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp TGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAAATTTTGCGAATGGCTTaGCCGCGGGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: CQEPVQREDTASGGDAPQILRMA*PRAPMM
Trigger: CATCATTGGTGCCCGCGGCAAAGCCATTCGCAAAAT...TTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CAA 90 bp CAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCATGACACAGATGCCTCCCTCAATTCGTCCATGATTTaGCGAATGGCTTTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: QRLGPRPQPSQHDTDASLNSSMI*RMALPR
Trigger: CCGCGGCAAAGCCATTCGCAAAATCATGGACGAATT...GAGGGAGGCATCTGTGTCATGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GCTGCTCATGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGTTTGATCATTATCGTTaGGGGCCCCAAGGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: AAHVRSLCRERTRLQEGMFDHYR*GPQGRV
Trigger: GACCCTCCCTTGGGGCCCCAAACGATAATGATCAAA...CATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACATGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CAA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAATGGTGCCTACCACCTaGCCTCCAGGCTCCACTCAC +
Preference number: 5 (lower is better)
Translates to: DVKTRKPETRAPSSALTAMVPTT*PPGSTH
Trigger: GTGAGTGGAGCCTGGAGGCAAGGTGGTAGGCACCAT...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGATGGTGCCTACCACCTaGCCTCCAGGCTCCACTCAC +
Preference number: 5 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGMVPTT*PPGSTH
Trigger: GTGAGTGGAGCCTGGAGGCAAGGTGGTAGGCACCAT...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp AGGAGGAAGCTCTACGACGGGGCTCATGCGATCCAAACGATGTCATaGGAATCACTGGGACTGAACTCGGGACACCCGAGGATGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RRKLYDGAHAIQTMS*ESLGLNSGHPRMRL
Trigger: CAGCCTCATCCTCGGGTGTCCCGAGTTCAGTCCCAGTGATTCTCATGACATCGTTTGGATCGCATGAGCCCCGTCGTAGAGCTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS TCA 90 bp GGTGCCGGGACATGTATGTTCACCTACGTGAAGAGGGGGCTGACTTaGCGTTCAGGACCCCAGAGAACAGGAAAGAGTCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GAGTCMFTYVKRGLT*RSGPQRTGKSPLAL
Trigger: CAGGGCCAATGGACTCTTTCCTGTTCTCTGGGGTCCTGAACGTCAAGTCAGCCCCCTCTTCACGTAGGTGAACATACATGTCCCGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS GCA 90 bp CGGTCCAAATTTGCAGCGAGGCCCGTGATGGCGATGATGTCAGACTaGAGCTCAGGTGCCGGGACATGTATGTTCACCTACGTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RSKFAARPVMAMMSD*SSGAGTCMFTYVKR
Trigger: CCTCTTCACGTAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAATTTGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470482.5
ENST00000487169.5
CDS CCA 90 bp TCTCCTGCATGGCTGGATCATCTTTCCCGTACCCCACATAACCGCTaGGCGGCTGAACCAGAAGAAGGGTTGTTGTGCTGGGCTCTGACT +
Preference number: 5 (lower is better)
Translates to: SPAWLDHLSRTPHNR*AAEPEEGLLCWALT
Trigger: AGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATGTGGGGTACGGGAAAGATGATCCAGCCATGCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458564.5
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGGGATCTGGATTTTGGTaGCAGTTTTTAGCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERGSGFW*QFLAPS
Trigger: ACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCC...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CGCACACACAGCCAGGCGCTAGGCTCCCTGCGGGACCTCGGGAAGGGGGAAGAGAGATCGGAACAGAAATaGAATAGCTATTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: RTHSQALGSLRDLGKGEERSEQK*NSYFPP
Trigger: TGGTGGAAAATAGCTATTCAATTTCTGTTCCGATCT...CTCTTCCCCCTTCCCGAGGTCCCGCAGGGAGCCTAGCGCCTGGCTGTGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACTTGTGGTATTCTGGCTaGGCGCGGATGTCAACAGTG +
Preference number: 5 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDLWYSG*ARMSTV
Trigger: CACTGTTGACATCCGCGCCAAGCCAGAATACCACAA...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGATCAGGTCCTGGTCCTaGTCCTCAGCCGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVIRSWS*SSAAGK
Trigger: CTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGAT...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTCCCTTGAGGGTGACTTaGTCGCTCTGTGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRPLRVT*SLCVPE
Trigger: CTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGG...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACCCTTGAGGGTGACTTaGTCGCTCTGTGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: DVKTRKPETRAPSSALTAPLRVT*SLCVPE
Trigger: CTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGCAGTCCTTGGCGCCCTaGAGGGTGACTTTGTCGCTC +
Preference number: 5 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSQSLAP*RVTLSL
Trigger: GAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTG...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGAGGGTTCTGTTCTTTTaGATCATTATCGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERRVLFF*IIIVWG
Trigger: GCCCCAAACGATAATGATCAAAAAGAACAGAACCCT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS TCA 90 bp GACTCTGGAGATGGGAGGCTGGCGACCACATGTGCTCCTCAACCATaGAAAGGTGGAACTGCTGACAGGAGTGAGGCATGTGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: DSGDGRLATTCAPQP*KGGTADRSEACVCS
Trigger: GGAACAGACACATGCCTCACTCCTGTCAGCAGTTCCACCTTTTCATGGTTGAGGAGCACATGTGGTCGCCAGCCTCCCATCTCCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417540.5
ENST00000423693.5
ENST00000496569.1
CDS TCA 90 bp GCACTGTGTCCAGGCCCCAGGATTTACAAATCGAGAGCTCATCCATaGAGGCCCCGCGGACTCCACTCAAAGGAGACACACTTCATGCTC +
Preference number: 5 (lower is better)
Translates to: ALCPGPRIYKSRAHP*RPRGLHSKETHFML
Trigger: GAGCATGAAGTGTGTCTCCTTTGAGTGGAGTCCGCGGGGCCTTCATGGATGAGCTCTCGATTTGTAAATCCTGGGGCCTGGACACAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS GCA 90 bp CTGAGCTTCCAGGTCCTCAATGATCTCCTGAATGCGTTTCTTGGCTaGCTCCACACAGTCCTTGGCGCCCTTGAGGGTGACTTTGTCGCT +
Preference number: 5 (lower is better)
Translates to: LSFQVLNDLLNAFLG*LHTVLGALEGDFVA
Trigger: AGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCATTCAGGAGATCATTGAGGACCTGGAAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000483086.1
ENST00000487169.5
CDS GCA 90 bp CGGTCCAAATTTGCAGCGAGGCCCGTGATGGCGATGATGTCAGACTaGAGCTCAGGTGCCGGGACATGTATGTTCACCTCAAACTCATCC +
Preference number: 5 (lower is better)
Translates to: RSKFAARPVMAMMSD*SSGAGTCMFTSNSS
Trigger: GGATGAGTTTGAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAATTTGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS GCA 90 bp GTGAAGGTCAAAGGGCACCTCTACTTCAATGGTGACAGGAACCAATaGCTGCAGGGAGGATGGTCATGGTTAGGCCGTGGGAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VKVKGHLYFNGDRNQ*LQGGWSWLGRGSSR
Trigger: TCTGGAGCTCCCACGGCCTAACCATGACCATCCTCCCTGCAGGCATTGGTTCCTGTCACCATTGAAGTAGAGGTGCCCTTTGACCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483086.1
CDS CCA 90 bp GAGCTGAGAAGGCGGTTCATGGCAATGGGGGAGCATCCAGTAGACTaGATTAAAGGGTCTCGCCTTTCCAGCAGAGGATGTGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: ELRRRFMAMGEHPVD*IKGSRLSSRGCGLV
Trigger: CACCAGTCCACATCCTCTGCTGGAAAGGCGAGACCCTTTAATCCAGTCTACTGGATGCTCCCCCATTGCCATGAACCGCCTTCTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462130.1
CDS CCA 90 bp AGGGGCGGCGACAGAGGAGACGGTGAAGCTATTGGCCTAAGAAAATaGGAGAACAGCCATGGGTTTGCAGAGCTCAAGGTCGTGTCACAG +
Preference number: 5 (lower is better)
Translates to: RGGDRGDGEAIGLRK*ENSHGFAELKVVSQ
Trigger: CTGTGACACGACCTTGAGCTCTGCAAACCCATGGCTGTTCTCCCATTTTCTTAGGCCAATAGCTTCACCGTCTCCTCTGTCGCCGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS CCA 90 bp AGCCTTGTGGGGCCCATGCTGCTGCCCAGAGACCCCATCTACTGTTaGCTCAGATTCACACTGAGCACTTCACTGTGTCTGCAAGACAAG +
Preference number: 5 (lower is better)
Translates to: SLVGPMLLPRDPIYC*LRFTLSTSLCLQDK
Trigger: CTTGTCTTGCAGACACAGTGAAGTGCTCAGTGTGAATCTGAGCCAACAGTAGATGGGGTCTCTGGGCAGCAGCATGGGCCCCACAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5
CDS-3UTR CAA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCCAACGGAACTCATGGTaGATCTCACACCTACACACA +
Preference number: 5 (lower is better)
Translates to: QGLSASSGVVCILLYLMLQRNSW*ISHLHT
Trigger: TGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTG...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAGAGAGGCCTTGGTCTTaGGCCAAAGACAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: DVKTRKPETRAPSSALTAERPWS*AKDSSK
Trigger: CTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCTC...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGAAGCGATGGTGTTCTTaGGGAATGGCAACAGTTGCT +
Preference number: 5 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLKRWCS*GMATVA
Trigger: AGCAACTGTTGCCATTCCCAAAGAACACCATCGCTT...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGTGTTCCTGGGCCACATaGACATCCTCTGTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSCSWAT*TSSVGP
Trigger: GGGCCCTACAGAGGATGTCAATGTGGCCCAGGAACA...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGCGGTTAATCAAATCTTaGACCATGCCTTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERRLIKS*TMPSIC
Trigger: ACAGATAGAAGGCATGGTCAAAGATTTGATTAACCG...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAGGTGCCTGTGGAACTaGTGGTCGATGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTRCLWN*WSMLIS
Trigger: GGAGATCAACATCGACCACAAGTTCCACAGGCACCT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGTCGATGCGGATCAAATaGCTCTTCTCACTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLSMRIK*LFSLSG
Trigger: TCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGA...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTCCAGCAGCTCTCGCTaGGCCTGCTGCACGCCCTGT +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVSSSSR*ACCTPC
Trigger: ACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGTCAATGATTAGATCCTaGGTACGCTCATTTTCCATG +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERSMIRS*VRSFSM
Trigger: CATGGAAAATGAGCGTACCAAGGATCTAATCATTGA...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGTTAAACAGTGGAGCAGGTCCTGAGCGGGCACGGCCAGGCCTGGAGGAGCGGAGGTCGATTTTGGTGTaGCTTTCTTCACGAATCTTT +
Preference number: 5 (lower is better)
Translates to: VLNSGAGPERARPGLEERRSILV*LSSRIF
Trigger: AAAGATTCGTGAAGAAAGCAACACCAAAATCGACCT...CCGCTCCTCCAGGCCTGGCCGTGCCCGCTCAGGACCTGCTCCACTGTTTAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACCACATTATCCAGGTTTaGGATCAAGGCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDHIIQV*DQGLQL
Trigger: GAGCTGGAGGCCTTGATCCAAAACCTGGATAATGTG...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGTCCAGCAGTCCAGCCTaGGCCCGGTCCAAATTTGCA +
Preference number: 5 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVSSSPA*ARSKFA
Trigger: TGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGA...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGATTTTGCGAATGGCTTaGCCGCGGGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTILRMA*PRAPMM
Trigger: CATCATTGGTGCCCGCGGCAAAGCCATTCGCAAAAT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGGGCAGGAAAAGGGCCTaGCTTTCTTTCCCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTGRKRA*LSFPVS
Trigger: GGAAACAGGGAAAGAAAGCAAGGCCCTTTTCCTGCC...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp GTGATTTTGGCCAGGTTCTGCCCTTTCTTGCCAATGATGAAACGGTaGAGCCAGGAAGGGGCGGCGACAGAGGAGACGGTGAAGCTATTG +
Preference number: 5 (lower is better)
Translates to: VILARFCPFLPMMKR*SQEGAATEETVKLL
Trigger: CAATAGCTTCACCGTCTCCTCTGTCGCCGCCCCTTCCTGGCTTCACCGTTTCATCATTGGCAAGAAAGGGCAGAACCTGGCCAAAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000453141.5
ENST00000467435.1
ENST00000477477.1
ENST00000498595.5
CDS GCA 90 bp CACCACATTATCCAGGTTTTGGATCAAGGCCTCCAGCTCCTTCTGTaGCTCTCGGACGGCGTCCTCCTTTCCAATGATGGTGATCAGGTC +
Preference number: 5 (lower is better)
Translates to: HHIIQVLDQGLQLLL*LSDGVLLSNDGDQV
Trigger: GACCTGATCACCATCATTGGAAAGGAGGACGCCGTCCGAGAGGCACAGAAGGAGCTGGAGGCCTTGATCCAAAACCTGGATAATGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS GCA 90 bp GTTGACTGCTTGTCTCTCCACGGCAACGTGAGAACTATTTTTGTGTaGTGTGGCACCGCAGCACTGAGAGCAGCATCCAGTACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VDCLSLHGNVRTIFV*CGTAALRAASSTQV
Trigger: CACCTGCGTACTGGATGCTGCTCTCAGTGCTGCGGTGCCACAGCACACAAAAATAGTTCTCACGTTGCCGTGGAGAGACAAGCAGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS-3UTR CAA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTGGCAACTTTGATTTGTaGCGGAACCAGCCCACTTCG +
Preference number: 5 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRGNFDL*RNQPTS
Trigger: CGAAGTGGGCTGGTTCCGCAACAAATCAAAGTTGCC...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp AAAACTCAAGTACCTGGGACAGGACAACTCGCTAGCAGCTCAGTCACCTCCGTGGAGAGGCCTTGGTCTTaGGCCAAAGACAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: KTQVPGTGQLASSSVTSVERPWS*AKDSSK
Trigger: CTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCTC...CACGGAGGTGACTGAGCTGCTAGCGAGTTGTCCTGTCCCAGGTACTTGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp AACAGGCCCATTCAGGGCTGCCTGAGCAAATGGGGACTTGCCGAGGCAGCTGCATTGATTCTGTTTATGTaGGCACCGCTCTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: NRPIQGCLSKWGLAEAAALILFM*APLFPM
Trigger: CATTGGGAAGAGCGGTGCCAACATAAACAGAATCAA...TGCAGCTGCCTCGGCAAGTCCCCATTTGCTCAGGCAGCCCTGAATGGGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCATGACCTCTGGGAATTaGTCACGAATTTCACGGATC +
Preference number: 5 (lower is better)
Translates to: QGLSASSGVVCILLYLMLMTSGN*SRISRI
Trigger: GATCCGTGAAATTCGTGACAAATTCCCAGAGGTCAT...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp ACACAGATGCCTCCCTCGGAGAGCAGGGTCTCTCGGCATCCAGCGGCGTGGTCTAGGTCGATTTTGGTGTaGCTTTCTTCACGAATCTTT +
Preference number: 5 (lower is better)
Translates to: TQMPPSESRVSRHPAAWSRSILV*LSSRIF
Trigger: AAAGATTCGTGAAGAAAGCAACACCAAAATCGACCT...AGACCACGCCGCTGGATGCCGAGAGACCCTGCTCTCCGAGGGAGGCATCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCGGATCAGACGGCCCTaGGTGCCAATGAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVRIRRP*VPMREL
Trigger: CAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGCACATTATCCAGGTTTaGGATCAAGGCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTHIIQV*DQGLQL
Trigger: GAGCTGGAGGCCTTGATCCAAAACCTGGATAATGTG...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCCTCCAGAGCTTCCTaGGCAGCCTCACACTTTTCT +
Preference number: 5 (lower is better)
Translates to: KDVKTRKPETRAPSSALTASRAS*AASHFS
Trigger: AGAAAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGC...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGATGCTCCAACCGGATTaGGGTAATTACTGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTMLQPD*GNYCPL
Trigger: AAGGGGGCAGTAATTACCCAAATCCGGTTGGAGCAT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GACACGGCTTCAGGAGGGGATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTAGGGTTCTGTTCTTTTaGATCATTATCGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: DTASGGDAPQLASSFRRSRVLFF*IIIVWG
Trigger: GCCCCAAACGATAATGATCAAAAAGAACAGAACCCT...ACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATCCCCTCCTGAAGCCGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CAA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTGGCAGGAAAAGGGCCTaGCTTTCTTTCCCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRGRKRA*LSFPVS
Trigger: GGAAACAGGGAAAGAAAGCAAGGCCCTTTTCCTGCC...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS GCA 90 bp ATAGATGGTTTTCCAGCAGAGACAGGAAAGAGCCTCACCAGTATGTaGGACAGCCCCGCCTCTCACATGGGAGGCGCCACTATTAACAAG +
Preference number: 5 (lower is better)
Translates to: IDGFPAETGKSLTSM*DSPASHMGGATINK
Trigger: CTTGTTAATAGTGGCGCCTCCCATGTGAGAGGCGGGGCTGTCGCACATACTGGTGAGGCTCTTTCCTGTCTCTGCTGGAAAACCATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS-3UTR CAA 90 bp GCATTCTGCTCTACCTCATGCTCTAGGCCCCATGCCATCGTCTCGGCCCTAGACTTCAGCAAAACTCTCTaGGGTCAAAACTGCAACGGA +
Preference number: 5 (lower is better)
Translates to: AFCSTSCSRPHAIVSALDFSKTL*GQNCNG
Trigger: TCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGAA...GTCTAGGGCCGAGACGATGGCATGGGGCCTAGAGCATGAGGTAGAGCAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTGATGGGTCGGATCTaGTTCCCCCAGGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVLMGRI*FPQAPA
Trigger: CGCTGGAGCCTGGGGGAACAAGATCCGACCCATCAA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTGTGATGACAGAAGCCTaGATGGGTCGGATCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPVMTEA*MGRILF
Trigger: GAACAAGATCCGACCCATCAAGGCTTCTGTCATCAC...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCTCTCCACAGCACGTTaGTCCTGCTCGGCAGAGATG +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVLSTAR*SCSAEM
Trigger: CATCTCTGCCGAGCAGGACAAACGTGCTGTGGAGAG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCGGGCAGCTTCGCAGTaGGCTCGCTTGCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPRAASQ*ARLPVM
Trigger: CATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATGTGCCAATGAGGGAGTaGTGCAGCTTGGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNVPMRE*CSLAGM
Trigger: CATCCCTGCCAAGCTGCACAACTCCCTCATTGGCAC...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGCGGATCAGACGGCCCTaGGTGCCAATGAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: STNAHDLGLVLNSGAGPERIRRP*VPMREL
Trigger: CAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCG...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGTCAACAGTGAAACTCTaGGTTTGCTTCTCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGSTVKL*VCFSSA
Trigger: GGCGGAGGAGAAGCAAACCAAGAGTTTCACTGTTGA...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGCACATTATCCAGGTTTaGGATCAAGGCCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: EADCTPQTGLSGPRETGRHIIQV*DQGLQL
Trigger: GAGCTGGAGGCCTTGATCCAAAACCTGGATAATGTG...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTCCAGCAGTCCAGCCTaGGCCCGGTCCAAATTTGCA +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVSSSPA*ARSKFA
Trigger: TGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGA...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTATGCTCCAACCGGATTaGGGTAATTACTGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPMLQPD*GNYCPL
Trigger: AAGGGGGCAGTAATTACCCAAATCCGGTTGGAGCAT...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp TGTCAGGAGCCTGTGCAGAGAGAGGACACGGCTTCAGGAGGGGATGCTCCCCAAAAGCGAATGTCCACCTaGAATTCGTCCATGATTTTG +
Preference number: 5 (lower is better)
Translates to: CQEPVQREDTASGGDAPQKRMST*NSSMIL
Trigger: CAAAATCATGGACGAATTCAAGGTGGACATTCGCTT...TTGGGGAGCATCCCCTCCTGAAGCCGTGTCCTCTCTCTGCACAGGCTCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000442730.1
CDS-3UTR CAA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCCTCTGGAAGGTGCCTaGGCCTCTTCGTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPPLEGA*ASSCAG
Trigger: CCCAGCACACGAAGAGGCCAAGGCACCTTCCAGAGG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS TCA 90 bp TGCTGCTGCCCAGAGACCCCATCTACTGTTGGCTCAGATTCACACTaGGCACTTCACTGTGTCTGCAAGACAAGTGCTGTTGCAAACCCT +
Preference number: 5 (lower is better)
Translates to: CCCPETPSTVGSDSH*ALHCVCKTSAVANP
Trigger: AGGGTTTGCAACAGCACTTGTCTTGCAGACACAGTGAAGTGCTCAGTGTGAATCTGAGCCAACAGTAGATGGGGTCTCTGGGCAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5
CDS GCA 90 bp AGCCTGCCAGCTTTTGCTACAACAGAATGTGGACCTCGGGGTCTCTaGAGCGCTTATGGTGACCAAGAGCTACCGTCTTCAAGAATTCTC +
Preference number: 5 (lower is better)
Translates to: SLPAFATTECGPRGL*SAYGDQELPSSRIL
Trigger: GAGAATTCTTGAAGACGGTAGCTCTTGGTCACCATAAGCGCTGCAGAGACCCCGAGGTCCACATTCTGTTGTAGCAAAAGCTGGCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417540.5
ENST00000422080.5
ENST00000427007.5
ENST00000428482.5
ENST00000452065.5
CDS GCA 90 bp TCTTGCCTTAGGGGACTCTGGAGATGGGAGGCTGGCGACCACATGTaGTCCTCAACCATGAAAAGGTGGAACTGCTGTTCCACTCTTATA +
Preference number: 5 (lower is better)
Translates to: SCLRGLWRWEAGDHM*SSTMKRWNCCSTLI
Trigger: TATAAGAGTGGAACAGCAGTTCCACCTTTTCATGGTTGAGGAGCACATGTGGTCGCCAGCCTCCCATCTCCAGAGTCCCCTAAGGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428482.5
CDS GCA 90 bp TGGTATTCTGGCTTGGCGCGGATGTCAACAGTGAAACTCTTGGTTTaGTGCAGAAACCAATCCCACTGTGTTAGCCTGACACCACGTGCC +
Preference number: 5 (lower is better)
Translates to: WYSGLARMSTVKLLV*CRNQSHCVSLTPRA
Trigger: GGCACGTGGTGTCAGGCTAACACAGTGGGATTGGTTTCTGCAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCCAGAATACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS CCA 90 bp TCCACAGCACGTTTGTCCTGCTCGGCAGAGATGAGTAAGACTTCATaGCGAGCTTTCTCGATGCCCTCTTTGGTGCCAGTGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: STARLSCSAEMSKTS*RAFSMPSLVPVILI
Trigger: GATCAAGATCACTGGCACCAAAGAGGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGGACAAACGTGCTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000422933.5
ENST00000427183.6
ENST00000453141.5
ENST00000470710.1
CDS-3UTR CAA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCACAACGGAACTCATGGTaGATCTCACACCTACACACA +
Preference number: 5 (lower is better)
Translates to: DVKTRKPETRAPSSALTAQRNSW*ISHLHT
Trigger: TGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTG...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGCGATGGTGTTCTTaGGGAATGGCAACAGTTGCT +
Preference number: 5 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRKRWCS*GMATVA
Trigger: AGCAACTGTTGCCATTCCCAAAGAACACCATCGCTT...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp AAGGATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACATTCTCGATGCCCTCTTaGGTGCCAGTGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: KDVKTRKPETRAPSSALTFSMPS*VPVILI
Trigger: GATCAAGATCACTGGCACCAAAGAGGGCATCGAGAA...TGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CCTGCCTCCTGCTGTCCATTGCCAGGTCTTCCTTGCACCCTGACACCTGTGCTGAATGACATACTTGTGTaGGGATTTCTTCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: PASCCPLPGLPCTLTPVLNDILV*GFLHFH
Trigger: GTGGAAGTGAAGAAATCCCAACACAAGTATGTCATT...CAGCACAGGTGTCAGGGTGCAAGGAAGACCTGGCAATGGACAGCAGGAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391975.5
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCCCTCCAGGGTGATCTaGTCTTCGCCCTCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVPSRVI*SSPSVN
Trigger: GTTCACAGAGGGCGAAGACAAGATCACCCTGGAGGG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTGTTCCTGGGCCACATaGACATCCTCTGTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVCSWAT*TSSVGP
Trigger: GGGCCCTACAGAGGATGTCAATGTGGCCCAGGAACA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGATGACCTCTGGGAATTaGTCACGAATTTCACGGATC +
Preference number: 5 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTMTSGN*SRISRI
Trigger: GATCCGTGAAATTCGTGACAAATTCCCAGAGGTCAT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCCCTTGAGGGTGACTTaGTCGCTCTGTGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVPLRVT*SLCVPE
Trigger: CTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp AGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTAAGGCCCTACCTAACTCATCCATCATCTaGCGGATCCCACTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: SCHLRQTAPTEDKRKALPNSSII*RIPLPF
Trigger: GAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTT...AGGTAGGGCCTTACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGGTCATGTCATCACCCTaGCAACAACCACCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSVMSSP*QQPPKG
Trigger: TCCTTTGGGTGGTTGTTGCAAGGGTGATGACATGAC...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp AGACAAAGGCAGAAAACTGCTGACCAACTCATCAGTAGCCTGGATTaGAAGGTGCAATCTTCCACATCAGCCTGCGCTGGCCCAATGACC +
Preference number: 5 (lower is better)
Translates to: RQRQKTADQLISSLD*KVQSSTSACAGPMT
Trigger: GGTCATTGGGCCAGCGCAGGCTGATGTGGAAGATTGCACCTTTCAATCCAGGCTACTGATGAGTTGGTCAGCAGTTTTCTGCCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460826.1
CDS GCA 90 bp TATTCTGGCTTGGCGCGGATGTCAACAGTGAAACTCTTGGTTTGCTaGAGAAACCAATCCCACTGTGTTAGCCTGACACCACGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: YSGLARMSTVKLLVC*RNQSHCVSLTPRAF
Trigger: GAAGGCACGTGGTGTCAGGCTAACACAGTGGGATTGGTTTCTGCAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCCAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS CCA 90 bp GTGAGAGACAAAGGCAGAAAACTGCTGACCAACTCATCAGTAGCCTaGATTGAAAGGTGCAATCTTCCACATCAGCCTGCGCTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: VRDKGRKLLTNSSVA*IERCNLPHQPALAQ
Trigger: TTGGGCCAGCGCAGGCTGATGTGGAAGATTGCACCTTTCAATCCAGGCTACTGATGAGTTGGTCAGCAGTTTTCTGCCTTTGTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460826.1
CDS-3UTR CAA 90 bp GTGCTGACTGACATGCCGGGTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAACTGGTTCATATCCTaGTATTTTCTCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VLTDMPGGPGAGVCYLSTNWFIS*YFLSSR
Trigger: CCTGGAGGAGAGAAAATACAAGGATATGAACCAGTT...CGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTCATGATGGAGAGGCCTaGGTCTTTGGCCAAAGACAG +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVHDGEA*VFGQRQ
Trigger: CTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCATG...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCCCTCCAGGGTGATCTaGTCTTCGCCCTCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPPSRVI*SSPSVN
Trigger: GTTCACAGAGGGCGAAGACAAGATCACCCTGGAGGG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GGAGCTGGAAGCAAGCAGCCAACAGGACAGAGTTCCAGAACTCATGCAGATGGGATGACCTCTGGGAATTaGTCACGAATTTCACGGATC +
Preference number: 5 (lower is better)
Translates to: GAGSKQPTGQSSRTHADGMTSGN*SRISRI
Trigger: GATCCGTGAAATTCGTGACAAATTCCCAGAGGTCAT...CCCATCTGCATGAGTTCTGGAACTCTGTCCTGTTGGCTGCTTGCTTCCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CAGGGTCTCTCGGCATCCAGCGGCGTGGTCTGCATTCTGCTCTACCTCATGCTCTCTTCTGCATGTATTTaGTGCATTTTTCCACCTCAT +
Preference number: 5 (lower is better)
Translates to: QGLSASSGVVCILLYLMLSSACI*CIFPPH
Trigger: ATGAGGTGGAAAAATGCACAAAATACATGCAGAAGA...GAGCATGAGGTAGAGCAGAATGCAGACCACGCCGCTGGATGCCGAGAGACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGTGCCAATGAGGGAGTaGTGCAGCTTGGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPVPMRE*CSLAGM
Trigger: CATCCCTGCCAAGCTGCACAACTCCCTCATTGGCAC...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATTTGTGGTATTCTGGCTaGGCGCGGATGTCAACAGTG +
Preference number: 5 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNLWYSG*ARMSTV
Trigger: CACTGTTGACATCCGCGCCAAGCCAGAATACCACAA...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGCCTCCAGAGCTTCCTaGGCAGCCTCACACTTTTCT +
Preference number: 5 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEASRAS*AASHFS
Trigger: AGAAAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGGCCTCCAGAGCTTCCTaGGCAGCCTCACACTTTTCT +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVASRAS*AASHFS
Trigger: AGAAAAGTGTGAGGCTGCCAAGGAAGCTCTGGAGGC...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTATTTTGCGAATGGCTTaGCCGCGGGCACCAATGATG +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVILRMA*PRAPMM
Trigger: CATCATTGGTGCCCGCGGCAAAGCCATTCGCAAAAT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS TCA 90 bp TGCTACAACAGAATGTGGACCTCGGGGTCTCTGCAGCGCTTATGGTaGCCAAGAGCTACCGTCTTCAAGAATTCTCCGTCTATTTTGCAG +
Preference number: 5 (lower is better)
Translates to: CYNRMWTSGSLQRLW*PRATVFKNSPSILQ
Trigger: CTGCAAAATAGACGGAGAATTCTTGAAGACGGTAGCTCTTGGTCACCATAAGCGCTGCAGAGACCCCGAGGTCCACATTCTGTTGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417540.5
ENST00000422080.5
ENST00000427007.5
ENST00000428482.5
ENST00000452065.5
CDS TCA 90 bp ACCTACAACAGAATGTGGACCTCGGGGTCTCTGCAGCGCTTATGGTaGCCAAGAGCTACCGTCTTCAAGAATTCTCCGTCTATTTTGCAG +
Preference number: 5 (lower is better)
Translates to: TYNRMWTSGSLQRLW*PRATVFKNSPSILQ
Trigger: CTGCAAAATAGACGGAGAATTCTTGAAGACGGTAGCTCTTGGTCACCATAAGCGCTGCAGAGACCCCGAGGTCCACATTCTGTTGTAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS GCA 90 bp GAGGGTGGGATCTCAACGGAAACTCCAGTTCTCTCAAGGATCTCCTaGAATGAATTGCCCTTGGGCCCAATGACATACTTGTGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: EGGISTETPVLSRIS*NELPLGPMTYLCWD
Trigger: ATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTGAGAGAACTGGAGTTTCCGTTGAGATCCCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000467435.1
ENST00000470710.1
CDS GCA 90 bp GGCGCCACTATTAACAAGCAGAGCAGGGCTAATGGGGGACCCACCTaGGTTCTCCTCTCTGTCTGGGAATTTAATTTGAACACTGAAATC +
Preference number: 5 (lower is better)
Translates to: GATINKQSRANGGPT*VLLSVWEFNLNTEI
Trigger: GATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGGTGGGTCCCCCATTAGCCCTGCTCTGCTTGTTAATAGTGGCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS CCA 90 bp ACTCCACTCAAAGGAGACACACTTCATGCTCGGAGGCAGTTACCTTaGCATAGACTTCAGTCAACGCCTGACCTAACTTTTCAGGTTCGC +
Preference number: 5 (lower is better)
Translates to: TPLKGDTLHARRQLP*HRLQSTPDLTFQVR
Trigger: GCGAACCTGAAAAGTTAGGTCAGGCGTTGACTGAAGTCTATGCCAAGGTAACTGCCTCCGAGCATGAAGTGTGTCTCCTTTGAGTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000470710.1
CDS CCA 90 bp CAGAGCAGGGCTAATGGGGGACCCACCTGCGTTCTCCTCTCTGTCTaGGAATTTAATTTGAACACTGAAATCCCGAGTAATCTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: QSRANGGPTCVLLSV*EFNLNTEIPSNLLD
Trigger: ATCCAGCAGATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGGTGGGTCCCCCATTAGCCCTGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS CCA 90 bp AAAAATCTCCATTGTCTAGAATGGGGGCCAGTTATGATCTTCACCTaGATCACAAGGGTTCTGGAGGACAGGCTCTCAGCCTGGACCAGA +
Preference number: 5 (lower is better)
Translates to: KNLHCLEWGPVMIFT*ITRVLEDRLSAWTR
Trigger: TCTGGTCCAGGCTGAGAGCCTGTCCTCCAGAACCCTTGTGATCCAGGTGAAGATCATAACTGGCCCCCATTCTAGACAATGGAGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS-3UTR CAA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGGGCAACTTTGATTTGTaGCGGAACCAGCCCACTTCG +
Preference number: 5 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEGNFDL*RNQPTS
Trigger: CGAAGTGGGCTGGTTCCGCAACAAATCAAAGTTGCC...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATGTGATGACAGAAGCCTaGATGGGTCGGATCTTGTTC +
Preference number: 5 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNVMTEA*MGRILF
Trigger: GAACAAGATCCGACCCATCAAGGCTTCTGTCATCAC...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGCATGATGGAGAGGCCTaGGTCTTTGGCCAAAGACAG +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVHDGEA*VFGQRQ
Trigger: CTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCATG...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGAGGTGCCTGTGGAACTaGTGGTCGATGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: STNAHDLGLVLNSGAGPERCLWN*WSMLIS
Trigger: GGAGATCAACATCGACCACAAGTTCCACAGGCACCT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGTTTGATCATTATCGTTaGGGGCCCCAAGGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEFDHYR*GPQGRV
Trigger: GACCCTCCCTTGGGGCCCCAAACGATAATGATCAAA...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GATGTTAAGACCAGAAAACCAGAGACTAGGGCCCCGTCCTCAGCCCTCACAGCAGAAGAGGGCAAACGTTaGGCTTTTATAAAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: DVKTRKPETRAPSSALTAEEGKR*AFIKSR
Trigger: CCTTGACTTTATAAAAGCCAAACGTTTGCCCTCTTC...TGCTGTGAGGGCTGAGGACGGGGCCCTAGTCTCTGGTTTTCTGGTCTTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp CTTTTCAGGTTCGCCTCGAAGTATTACAGTCTCAGAGATGCTGTCTaGGGGTGGGATCTCAACGGAAACTCCAGTTCTCTCAAGGATCTC +
Preference number: 5 (lower is better)
Translates to: LFRFASKYYSLRDAV*GWDLNGNSSSLKDL
Trigger: GAGATCCTTGAGAGAACTGGAGTTTCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAGACTGTAATACTTCGAGGCGAACCTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000453141.5
ENST00000467435.1
ENST00000470710.1
CDS TCA 90 bp GGCAGCTTCGCAGTTGGCTCGCTTGCCTGTGATGATAATGGTCTCTaGATTGCTATTCTCTGCTGGAAGGTCGATTTTGGTGTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: GSFAVGSLACDDNGL*IAILCWKVDFGVAF
Trigger: GAAAGCAACACCAAAATCGACCTTCCAGCAGAGAATAGCAATTCAGAGACCATTATCATCACAGGCAAGCGAGCCAACTGCGAAGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000452931.1
ENST00000460826.1
ENST00000487169.5
ENST00000488923.1
CDS TCA 90 bp CTAATCCACTGGGGATCTAGAAACCAGGTCATGAAATCGCAGGATTaGAAGGAACCTTCAAAGGCTGTCTGGGGAGGACCAAGAACTCTG +
Preference number: 5 (lower is better)
Translates to: LIHWGSRNQVMKSQD*KEPSKAVWGGPRTL
Trigger: CAGAGTTCTTGGTCCTCCCCAGACAGCCTTTGAAGGTTCCTTTCAATCCTGCGATTTCATGACCTGGTTTCTAGATCCCCAGTGGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449504.5
ENST00000452065.5
ENST00000490697.1
CDS GCA 90 bp TGTTTACCTGATGTTCCAGATGGTATTTGTCCAGTGGACTATTGGTaGTGTGAGGGCAGGGCACATGTTGTCACCCATACTCATTGCCTC +
Preference number: 5 (lower is better)
Translates to: CLPDVPDGICPVDYW*CEGRAHVVTHTHCL
Trigger: GAGGCAATGAGTATGGGTGACAACATGTGCCCTGCCCTCACAGCACCAATAGTCCACTGGACAAATACCATCTGGAACATCAGGTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425989.5
CDS CCA 90 bp AGGTGTTTACCTGATGTTCCAGATGGTATTTGTCCAGTGGACTATTaGTGCTGTGAGGGCAGGGCACATGTTGTCACCCATACTCATTGC +
Preference number: 5 (lower is better)
Translates to: RCLPDVPDGICPVDY*CCEGRAHVVTHTHC
Trigger: GCAATGAGTATGGGTGACAACATGTGCCCTGCCCTCACAGCACCAATAGTCCACTGGACAAATACCATCTGGAACATCAGGTAAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425989.5
CDS CCA 90 bp ACAGGCTTAGGTGTTTACCTGATGTTCCAGATGGTATTTGTCCAGTaGACTATTGGTGCTGTGAGGGCAGGGCACATGTTGTCACCCATA +
Preference number: 5 (lower is better)
Translates to: TGLGVYLMFQMVFVQ*TIGAVRAGHMLSPI
Trigger: TATGGGTGACAACATGTGCCCTGCCCTCACAGCACCAATAGTCCACTGGACAAATACCATCTGGAACATCAGGTAAACACCTAAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425989.5
CDS-3UTR CAA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCATGATGGAGAGGCCTaGGTCTTTGGCCAAAGACAG +
Preference number: 5 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPHDGEA*VFGQRQ
Trigger: CTGTCTTTGGCCAAAGACCAAGGCCTCTCCATCATG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GAGGCTGATTGCACTCCACAAACAGGACTGTCTGGACCAAGGGAAACTGGCAGGAGTTTCTCTCCATTTTaGCCAATAACAAAGCGATGG +
Preference number: 5 (lower is better)
Translates to: EADCTPQTGLSGPRETGRSFSPF*PITKRW
Trigger: CCATCGCTTTGTTATTGGCAAAAATGGAGAGAAACT...CCTGCCAGTTTCCCTTGGTCCAGACAGTCCTGTTTGTGGAGTGCAATCAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGATGCGCACGGACACCTaGTACTGGTCTTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVMRTDT*YWSLIL
Trigger: CAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCAT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAATTCGTCCATGATTTaGCGAATGGCTTTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVNSSMI*RMALPR
Trigger: CCGCGGCAAAGCCATTCGCAAAATCATGGACGAATT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS TCA 90 bp ATGGGGGACCCACCTGCGTTCTCCTCTCTGTCTGGGAATTTAATTTaGACACTGAAATCCCGAGTAATCTGCTGGATTCTGGAACCTTTG +
Preference number: 5 (lower is better)
Translates to: MGDPPAFSSLSGNLI*TLKSRVICWILEPL
Trigger: CAAAGGTTCCAGAATCCAGCAGATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGGTGGGTCCCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS TCA 90 bp GTGACAGGAACCAATGCCATCACTTGCCACAGGATATATCTGCGTTaGCTGCTTGTCTCTCCACGGCAACGTGAGAACTATTTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: VTGTNAITCHRIYLR*LLVSPRQRENYFCV
Trigger: CACACAAAAATAGTTCTCACGTTGCCGTGGAGAGACAAGCAGTCAACGCAGATATATCCTGTGGCAAGTGATGGCATTGGTTCCTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS GCA 90 bp GACCTAACTTTTCAGGTTCGCCTCGAAGTATTACAGTCTCAGAGATaGTGTCTGAGGGTGGGATCTCAACGGAAACTCCAGTTCTCTCAA +
Preference number: 5 (lower is better)
Translates to: DLTFQVRLEVLQSQR*CLRVGSQRKLQFSQ
Trigger: TTGAGAGAACTGGAGTTTCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAGACTGTAATACTTCGAGGCGAACCTGAAAAGTTAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000453141.5
ENST00000467435.1
ENST00000470710.1
CDS GCA 90 bp TATTGGTGCTGTGAGGGCAGGGCACATGTTGTCACCCATACTCATTaGCTCGGTTGGTGTCTAGCACCTAGTAGGTTCTCAAATACTTTT +
Preference number: 5 (lower is better)
Translates to: YWCCEGRAHVVTHTH*LGWCLAPSRFSNTF
Trigger: AAAAGTATTTGAGAACCTACTAGGTGCTAGACACCAACCGAGGCAATGAGTATGGGTGACAACATGTGCCCTGCCCTCACAGCACCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425989.5
CDS GCA 90 bp CAGGAACCAATGCCATCACTTGCCACAGGATATATCTGCGTTGACTaGTTGTCTCTCCACGGCAACGTGAGAACTATTTTTGTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: QEPMPSLATGYICVD*LSLHGNVRTIFVCC
Trigger: ACAGCACACAAAAATAGTTCTCACGTTGCCGTGGAGAGACAAGCAGTCAACGCAGATATATCCTGTGGCAAGTGATGGCATTGGTTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS CCA 90 bp ATTTGTTGCGGAACCAGCCCACTTCGGTGTTCAGCAAAACTCTCTTaGGTCAAAACTGCAACGGAACTCATGGTTGATCTCACACCTACA +
Preference number: 5 (lower is better)
Translates to: ICCGTSPLRCSAKLS*VKTATELMVDLTPT
Trigger: TGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGAACACCGAAGTGGGCTGGTTCCGCAACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000413241.5
ENST00000420451.5
ENST00000422080.5
ENST00000422933.5
ENST00000423693.5
ENST00000425989.5
ENST00000426343.5
ENST00000427183.6
ENST00000428482.5
ENST00000430918.5
ENST00000441124.5
ENST00000442714.5
ENST00000444092.5
ENST00000449864.5
ENST00000452065.5
ENST00000458564.5
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTATGACCTCTGGGAATTaGTCACGAATTTCACGGATC +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVMTSGN*SRISRI
Trigger: GATCCGTGAAATTCGTGACAAATTCCCAGAGGTCAT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GAAGAAGAGCCCAGCTGTCATCTAAGGCAAACTGCCCCCACTGAGGACAAGCGTTCTTCTGCATGTATTTaGTGCATTTTTCCACCTCAT +
Preference number: 5 (lower is better)
Translates to: EEEPSCHLRQTAPTEDKRSSACI*CIFPPH
Trigger: ATGAGGTGGAAAAATGCACAAAATACATGCAGAAGA...ACGCTTGTCCTCAGTGGGGGCAGTTTGCCTTAGATGACAGCTGGGCTCTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAACTCATCCATCATCTaGCGGATCCCACTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVNSSII*RIPLPF
Trigger: GAAAGGAAGTGGGATCCGCAAGATGATGGATGAGTT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTTTCTCCCGATAATCTaGGGATGGTATTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVFLPII*GWYLGS
Trigger: AGACCCCAAATACCATCCCAAGATTATCGGGAGAAA...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATTTTCTCCCGATAATCTaGGGATGGTATTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNFLPII*GWYLGS
Trigger: AGACCCCAAATACCATCCCAAGATTATCGGGAGAAA...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGTCTGAAGCGAATGTCCACCTaGAATTCGTCCATGATTTTG +
Preference number: 5 (lower is better)
Translates to: AATRLGLSRLGLLKNSSLKRMST*NSSMIL
Trigger: CAAAATCATGGACGAATTCAAGGTGGACATTCGCTT...CAGACTCGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp CAGTTCTCTCAAGGATCTCCTGCAATGAATTGCCCTTGGGCCCAATaGCATACTTGTGTTGGGATTTCTTCACTTCCACTGCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: QFSQGSPAMNCPWAQ*HTCVGISSLPLQWL
Trigger: CAACCATTGCAGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTGAGAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000470710.1
CDS TCA 90 bp TGGGATCTCAACGGAAACTCCAGTTCTCTCAAGGATCTCCTGCAATaGATTGCCCTTGGGCCCAATGACATACTTGTGTTGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: WDLNGNSSSLKDLLQ*IALGPNDILVLGFL
Trigger: AAGAAATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTGAGAGAACTGGAGTTTCCGTTGAGATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000467435.1
ENST00000470710.1
CDS-3UTR CAA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGTTCAGCAAAACTCTCTaGGGTCAAAACTGCAACGGA +
Preference number: 5 (lower is better)
Translates to: STNAHDLGLVLNSGAGPEFSKTL*GQNCNG
Trigger: TCCGTTGCAGTTTTGACCCAAGAGAGTTTTGCTGAA...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CCACCCAAAGGAAAAGAGAGCGCTGAACAGTTTAGGAAAGGGCTCGCGTCTAAGAGTTTCTCTCCATTTTaGCCAATAACAAAGCGATGG +
Preference number: 5 (lower is better)
Translates to: PPKGKESAEQFRKGLASKSFSPF*PITKRW
Trigger: CCATCGCTTTGTTATTGGCAAAAATGGAGAGAAACT...CTTAGACGCGAGCCCTTTCCTAAACTGTTCAGCGCTCTCTTTTCCTTTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTGGATCTGGATTTTGGTaGCAGTTTTTAGCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVGSGFW*QFLAPS
Trigger: ACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCC...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTGACAATGTCACTTTTTaGTGCTGGGTCTGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVDNVTF*CWVWKV
Trigger: AACTTTCCAGACCCAGCACAAAAAAGTGACATTGTC...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GAGGCAGCTGCAACTAGACTTGGGCTAAGCCGTCTGGGTCTACTCAAGAATTCGAGATCGGAACAGAAATaGAATAGCTATTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: EAAATRLGLSRLGLLKNSRSEQK*NSYFPP
Trigger: TGGTGGAAAATAGCTATTCAATTTCTGTTCCGATCT...CGAATTCTTGAGTAGACCCAGACGGCTTAGCCCAAGTCTAGTTGCAGCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATAGGGTTCTGTTCTTTTaGATCATTATCGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNRVLFF*IIIVWG
Trigger: GCCCCAAACGATAATGATCAAAAAGAACAGAACCCT...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS CCA 90 bp AGTATCCCTTCTACCCCTAAGGGTAGCATGAACACGACAGAGCACTaGTATTTGCAAACAAACCTTCAGAGGTTTGTCATGAGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: SIPSTPKGSMNTTEH*YLQTNLQRFVMRVS
Trigger: ACTTACCCTCATGACAAACCTCTGAAGGTTTGTTTGCAAATACCAGTGCTCTGTCGTGTTCATGCTACCCTTAGGGGTAGAAGGGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488923.1
CDS-3UTR CAA 90 bp GCCGTGGTCACCCTAGCCTATGAAGCTGGAAGCTATATTCCTTCCAATCCCAATCGGTTAATCAAATCTTaGACCATGCCTTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: AVVTLAYEAGSYIPSNPNRLIKS*TMPSIC
Trigger: ACAGATAGAAGGCATGGTCAAAGATTTGATTAACCG...ATTGGGATTGGAAGGAATATAGCTTCCAGCTTCATAGGCTAGGGTGACCACGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGGACAATGTCACTTTTTaGTGCTGGGTCTGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVDNVTF*CWVWKV
Trigger: AACTTTCCAGACCCAGCACAAAAAAGTGACATTGTC...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp GTGGACCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTAGGTCGATTTTGGTGTaGCTTTCTTCACGAATCTTT +
Preference number: 5 (lower is better)
Translates to: VDQELESVILARMLMTLVRSILV*LSSRIF
Trigger: AAAGATTCGTGAAGAAAGCAACACCAAAATCGACCT...AACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS TCA 90 bp CGAATTTCACGGATCCGTTCACCCTTCTGCCCAATGATTGTGCGATaGAATCTTTGCTCAATGATTAGATCCTTGGTACGCTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: RISRIRSPFCPMIVR*NLCSMIRSLVRSFS
Trigger: GGAAAATGAGCGTACCAAGGATCTAATCATTGAGCAAAGATTTCATCGCACAATCATTGGGCAGAAGGGTGAACGGATCCGTGAAATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000487169.5
ENST00000498595.5
CDS CCA 90 bp TCCAAGTCTTGCAGTTTCTCTCCATTTTTGCCAATAACAAAGCGATaGTGTTCTTTGGGAATGGCAACAGTTGCTGAGGCCTTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: SKSCSFSPFLPITKR*CSLGMATVAEAFSK
Trigger: TTTGGAGAAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTTGTTATTGGCAAAAATGGAGAGAAACTGCAAGACTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442714.5
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGAATGACATACTTGTGTaGGGATTTCTTCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVNDILV*GFLHFH
Trigger: GTGGAAGTGAAGAAATCCCAACACAAGTATGTCATT...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000391976.6
CDS-3UTR CAA 90 bp CCAGGAGCTGGAGTCTGTTATCTTAGCACGAATGCTCATGACCTTGGTTTAGTGTCAATGATTAGATCCTaGGTACGCTCATTTTCCATG +
Preference number: 5 (lower is better)
Translates to: PGAGVCYLSTNAHDLGLVSMIRS*VRSFSM
Trigger: CATGGAAAATGAGCGTACCAAGGATCTAATCATTGA...CACTAAACCAAGGTCATGAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS TCA 90 bp CGAATTTCACGGATCCGTTCACCCTTCTGCCCAATGATTGTGCGATaGAATCTTTGCTCAATGATTAGATCCTTGGTACGCTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: RISRIRSPFCPMIVR*NLCSMIRSLVRSFS
Trigger: TGAAAATGAGCGTACCAAGGATCTAATCATTGAGCAAAGATTTCATCGCACAATCATTGGGCAGAAGGGTGAACGGATCCGTGAAATTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452931.1
CDS CCA 90 bp ATCTCCTGCAATGAATTGCCCTTGGGCCCAATGACATACTTGTGTTaGGATTTCTTCACTTCCACTGCAATGGTTGTAGTCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ISCNELPLGPMTYLC*DFFTSTAMVVVFFF
Trigger: GAAAAAGAAGACTACAACCATTGCAGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000470710.1
CDS-3UTR CAA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTAGTTTCTCTCCATTTTaGCCAATAACAAAGCGATGG +
Preference number: 5 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPSFSPF*PITKRW
Trigger: CCATCGCTTTGTTATTGGCAAAAATGGAGAGAAACT...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CTTAGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTCGGTTAATCAAATCTTaGACCATGCCTTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: LSTNAHDLGLVLNSGAGPRLIKS*TMPSIC
Trigger: ACAGATAGAAGGCATGGTCAAAGATTTGATTAACCG...AGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp AGCACGAATGCTCATGACCTTGGTTTAGTGTTAAACAGTGGAGCAGGTCCTGAGAGATCGGAACAGAAATaGAATAGCTATTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: STNAHDLGLVLNSGAGPERSEQK*NSYFPP
Trigger: TGGTGGAAAATAGCTATTCAATTTCTGTTCCGATCT...CTCAGGACCTGCTCCACTGTTTAACACTAAACCAAGGTCATGAGCATTCGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS-3UTR CAA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACGGATCTGGATTTTGGTaGCAGTTTTTAGCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNGSGFW*QFLAPS
Trigger: ACTTGGAGCTAAAAACTGCAACCAAAATCCAGATCC...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS-3UTR CAA 90 bp CTGGGTCTACTCAAGAATTCGAGTCTGAAGATGACCAAGCTTGAGTTATTCAACGAAGAGGGCAAACGTTaGGCTTTTATAAAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: LGLLKNSSLKMTKLELFNEEGKR*AFIKSR
Trigger: CCTTGACTTTATAAAAGCCAAACGTTTGCCCTCTTC...GTTGAATAACTCAAGCTTGGTCATCTTCAGACTCGAATTCTTGAGTAGACCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391975.5
ENST00000427183.6
CDS TCA 90 bp CTGGTATTTGCAAACAAACCTTCAGAGGTTTGTCATGAGGGTAAGTaGGATAGATCATTTGTCCAACAACTAACTTACGTTGCAAATTAC +
Preference number: 5 (lower is better)
Translates to: LVFANKPSEVCHEGK*DRSFVQQLTYVANY
Trigger: GTAATTTGCAACGTAAGTTAGTTGTTGGACAAATGATCTATCTCACTTACCCTCATGACAAACCTCTGAAGGTTTGTTTGCAAATACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488923.1
CDS CCA 72 bp CGGCGCTTGCGCAGAGGCGGACAACGCGGACGACTCTaGGCTTGCGCACTCGGAAGCCGGCCGCATGGGGGA +
Preference number: 6 (lower is better)
Translates to: RRLRRGGQRGRL*ACALGSRPHGG
Trigger: TCCCCCATGCGGCCGGCTTCCGAGTGCGCAAGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAAGCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGTCGTGGGCCCCCGCCCGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLSWAPARWS
Trigger: GGACCAGCGGGCGGGGGCCCACGACAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000391975.5
ENST00000426343.5
ENST00000427183.6
ENST00000449864.5
CDS CCA 72 bp TTGTCCCCTGAAGCTCCTGGCTGGGCCTCAGGCCGGTaGACGTGCCAGGGCGCCTCAGGGCTCCAAGGCCCA +
Preference number: 6 (lower is better)
Translates to: LSPEAPGWASGR*TCQGASGLQGP
Trigger: TGGGCCTTGGAGCCCTGAGGCGCCCTGGCACGTCCACCGGCCTGAGGCCCAGCCAGGAGCTTCAGGGGACAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484412.1
ENST00000487169.5
CDS CAA 90 bp AGCACGGCGCTTGCGCAGAGGCGGACAACGCGGACGACTCTGGGCTaGCGCACTCGGAAGCCGGCCGCATGGGGGAGGGGAAGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: STALAQRRTTRTTLG*RTRKPAAWGRGRRP
Trigger: TGGCCTTCTTCCCCTCCCCCATGCGGCCGGCTTCCGAGTGCGCAAGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAAGCGCCGTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS GCA 72 bp TTGCGCAGAGGCGGACAACGCGGACGACTCTGGGCTTaGGCACTCGGAAGCCGGCCGCATGGGGGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: LRRGGQRGRLWA*ALGSRPHGGGE
Trigger: TTCCCCTCCCCCATGCGGCCGGCTTCCGAGTGCGCAAGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS CAA 90 bp CCCCCAGCCTCTATATGGCCAACTGCCGTGGGAGGAGCACGGCGCTaGCGCAGAGGCGGACAACGCGGACGACTCTGGGCTTGCGCACTC +
Preference number: 6 (lower is better)
Translates to: PPASIWPTAVGGARR*RRGGQRGRLWACAL
Trigger: GAGTGCGCAAGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAAGCGCCGTGCTCCTCCCACGGCAGTTGGCCATATAGAGGCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS GCA 72 bp GATGCTCCCCAACTCGCAAGCAGCTTCCGACGCAGTTaGCACCCTCAGGACACCAAGCCCGCCTGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: DAPQLASSFRRS*HPQDTKPACPP
Trigger: GGGCGGGCAGGCGGGCTTGGTGTCCTGAGGGTGGCAACTGCGTCGGAAGCTGCTTGCGAGTTGGGGAGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442730.1
ENST00000487169.5
CDS CCA 72 bp ACCACGTCAGCTAGCTTGTCCCCTGAAGCTCCTGGCTaGGCCTCAGGCCGGTGGACGTGCCAGGGCGCCTCA +
Preference number: 6 (lower is better)
Translates to: TTSASLSPEAPG*ASGRWTCQGAS
Trigger: TGAGGCGCCCTGGCACGTCCACCGGCCTGAGGCCCAGCCAGGAGCTTCAGGGGACAAGCTAGCTGACGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484412.1
CDS CCA 72 bp AACACAAGTGCCACCTTGTCCCCTGAAGCTCCTGGCTaGGCCTCAGGCCGGTGGACGTGCCAGGGCGCCTCA +
Preference number: 6 (lower is better)
Translates to: NTSATLSPEAPG*ASGRWTCQGAS
Trigger: TGAGGCGCCCTGGCACGTCCACCGGCCTGAGGCCCAGCCAGGAGCTTCAGGGGACAAGGTGGCACTTGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS TCA 72 bp CGAATGGCTTTGCCGCGGGCACCAATGATGCGGGCGTaGACGCGGTGGTCCAGCGGGACGTCCTCAGAAACC +
Preference number: 6 (lower is better)
Translates to: RMALPRAPMMRA*TRWSSGTSSET
Trigger: GGTTTCTGAGGACGTCCCGCTGGACCACCGCGTTCACGCCCGCATCATTGGTGCCCGCGGCAAAGCCATTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000470482.5
ENST00000487169.5
ENST00000488013.1
CDS TCA 72 bp CGTTGCAACTGGAGGTCACATTCATCCCCCTGCAGCTaGGACCCTTCCACAGCCCCCGCACCCACCGTGGGC +
Preference number: 6 (lower is better)
Translates to: RCNWRSHSSPCS*DPSTAPAPTVG
Trigger: GCCCACGGTGGGTGCGGGGGCTGTGGAAGGGTCTCAGCTGCAGGGGGATGAATGTGACCTCCAGTTGCAACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS TCA 72 bp GGACCCAGAAGTGGTGAGAGGGAAGGCCACCCGCCGTaGAGGGAAGTCAGTGCCCAGTCCGAGCAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GPRSGEREGHPP*REVSAQSEQEE
Trigger: CTCCTCCTGCTCGGACTGGGCACTGACTTCCCTTCACGGCGGGTGGCCTTCCCTCTCACCACTTCTGGGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS GCA 72 bp ATGCGAGATGCAAGCTCCAGCAGCTCTCGCTTGGCCTaGTGCACGCCCTGTGGGTCCCCCTCGATGCGGATC +
Preference number: 6 (lower is better)
Translates to: MRDASSSSSRLA*CTPCGSPSMRI
Trigger: GATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGCTCGGGCCCCACACCAGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLLGPHTRRR
Trigger: TCTCCTTCTGGTGTGGGGCCCGAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391976.6
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGCTCCAGAAAGCAGAGGGAGCGCGC +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLLQKAEGAR
Trigger: GCGCGCTCCCTCTGCTTTCTGGAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442714.5
CDS GCA 72 bp CTATATGGCCAACTGCCGTGGGAGGAGCACGGCGCTTaGGCAGAGGCGGACAACGCGGACGACTCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: LYGQLPWEEHGA*AEADNADDSGL
Trigger: AAGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAAGCGCCGTGCTCCTCCCACGGCAGTTGGCCATATAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS CAA 72 bp TCTATATGGCCAACTGCCGTGGGAGGAGCACGGCGCTaGCGCAGAGGCGGACAACGCGGACGACTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SIWPTAVGGARR*RRGGQRGRLWA
Trigger: AGCCCAGAGTCGTCCGCGTTGTCCGCCTCTGCGCAAGCGCCGTGCTCCTCCCACGGCAGTTGGCCATATAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496569.1
CDS GCA 72 bp CGAGATGCAAGCTCCAGCAGCTCTCGCTTGGCCTGCTaGACGCCCTGTGGGTCCCCCTCGATGCGGATCAAA +
Preference number: 6 (lower is better)
Translates to: RDASSSSSRLAC*TPCGSPSMRIK
Trigger: TTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CCA 72 bp TTTCCATGCGAGATGCAAGCTCCAGCAGCTCTCGCTTaGCCTGCTGCACGCCCTGTGGGTCCCCCTCGATGC +
Preference number: 6 (lower is better)
Translates to: FPCEMQAPAALA*PAARPVGPPRC
Trigger: GCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CCA 72 bp CGCAAGACCTGGCCTCTGCGGATGACGAAGTGGCGGTaGTGCTTGGGGTCCACCAGCATGGAGTCTTCCACC +
Preference number: 6 (lower is better)
Translates to: RKTWPLRMTKWR*CLGSTSMESST
Trigger: GGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CAA 72 bp TCCCAGCTACTCCCGGGGCTGAGGCACGAGAATTGCTaGAACCCGGGAGGCGGAGGTTGCTGTGAGCCGAGA +
Preference number: 6 (lower is better)
Translates to: SQLLPGLRHENC*NPGGGGCCEPR
Trigger: TCTCGGCTCACAGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCGTGCCTCAGCCCCGGGAGTAGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488013.1
CDS TCA 72 bp CTTCAGCAATCTCCCGCAAGACCTGGCCTCTGCGGATaGCGAAGTGGCGGTGGTGCTTGGGGTCCACCAGCA +
Preference number: 6 (lower is better)
Translates to: LQQSPARPGLCG*RSGGGAWGPPA
Trigger: TGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS TCA 72 bp CTGGCACTCGGGAGAGGATGCGACAGGCCACTCCTGTaGCATGGCCTCCCGGGAAAGGGGTCTACCTCAAAC +
Preference number: 6 (lower is better)
Translates to: LALGRGCDRPLL*HGLPGKGSTSN
Trigger: GTTTGAGGTAGACCCCTTTCCCGGGAGGCCATGTCACAGGAGTGGCCTGTCGCATCCTCTCCCGAGTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGCTGGTATGGGATGGGAAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLLVWDGKWE
Trigger: CTCCCACTTCCCATCCCATACCAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422933.5
CDS GCA 72 bp CCCCAAACTCTGTGTCCAGCCGAGAAGCACAGCCCGTaGGCACACGGTAGGAGCAAGAGGGCTACCTCCACT +
Preference number: 6 (lower is better)
Translates to: PQTLCPAEKHSP*AHGRSKRATST
Trigger: AGTGGAGGTAGCCCTCTTGCTCCTACCGTGTGCGCACGGGCTGTGCTTCTCGGCTGGACACAGAGTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS CCA 72 bp CTCCAGCAGCTCTCGCTTGGCCTGCTGCACGCCCTGTaGGTCCCCCTCGATGCGGATCAAATTGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: LQQLSLGLLHAL*VPLDADQIALL
Trigger: GAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CCA 72 bp ATCTCCCGCAAGACCTGGCCTCTGCGGATGACGAAGTaGCGGTGGTGCTTGGGGTCCACCAGCATGGAGTCT +
Preference number: 6 (lower is better)
Translates to: ISRKTWPLRMTK*RWCLGSTSMES
Trigger: AGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CCA 72 bp CAAGGTCGTGTCACAGTGAAAGCCAGGCTGCTCACCTaGGGCTCAGAGGCACGCTCTCCCCAAACCTGGGCA +
Preference number: 6 (lower is better)
Translates to: QGRVTVKARLLT*GSEARSPQTWA
Trigger: TGCCCAGGTTTGGGGAGAGCGTGCCTCTGAGCCCCAGGTGAGCAGCCTGGCTTTCACTGTGACACGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS CCA 72 bp CAGGACCCCAGAGAACAGGAAAGAGTCCATTGGCCCTaGGACCCAGAAGTGGTGAGAGGGAAGGCCACCCGC +
Preference number: 6 (lower is better)
Translates to: QDPREQERVHWP*DPEVVRGKATR
Trigger: GCGGGTGGCCTTCCCTCTCACCACTTCTGGGTCCCAGGGCCAATGGACTCTTTCCTGTTCTCTGGGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS CAA 72 bp TTTTCCATGCGAGATGCAAGCTCCAGCAGCTCTCGCTaGGCCTGCTGCACGCCCTGTGGGTCCCCCTCGATG +
Preference number: 6 (lower is better)
Translates to: FSMRDASSSSSR*ACCTPCGSPSM
Trigger: CATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CAA 72 bp CCGCACTCCTCCATGATGGAGCGGATCAGACGGCCCTaGGTGCCAATGAGGGAGTTGTGCAGCTTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PHSSMMERIRRP*VPMRELCSLAG
Trigger: CCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTCCATCATGGAGGAGTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS CAA 72 bp GCCTCCACACAGTCCTTGGCGCCCTTGAGGGTGACTTaGTCGCTCTGTGTGCCAGAGCGTGGGAAGCTGACC +
Preference number: 6 (lower is better)
Translates to: ASTQSLAPLRVT*SLCVPERGKLT
Trigger: GGTCAGCTTCCCACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000483086.1
ENST00000487169.5
CDS CAA 90 bp TTCTTGGCTGCCTCCACACAGTCCTTGGCGCCCTTGAGGGTGACTTaGTCGCTCTGTGTGCCAGAGCGTGGGAAGCTGACCATCACCCCG +
Preference number: 6 (lower is better)
Translates to: FLAASTQSLAPLRVT*SLCVPERGKLTITP
Trigger: CGGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGCAGCCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000483086.1
ENST00000487169.5
CDS CAA 90 bp GAGCGGATCAGACGGCCCTTGGTGCCAATGAGGGAGTTGTGCAGCTaGGCAGGGATGGAGACCTCTACCTCGGCTATGTTGGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ERIRRPLVPMRELCS*AGMETSTSAMLACS
Trigger: GCTGCAGGCCAACATAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471294.1
CDS TCA 72 bp TCAGGTCCTGGTCCTTGTCCTCAGCCGCAGGGAAGATaGCACGTGCTCCAGTGCTGTCGCGCACCTTGCGAA +
Preference number: 6 (lower is better)
Translates to: SGPGPCPQPQGR*HVLQCCRAPCE
Trigger: TTCGCAAGGTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000459788.1
ENST00000479169.5
ENST00000487169.5
CDS TCA 72 bp AGGAAAGAGTCCATTGGCCCTGGGACCCAGAAGTGGTaGGAGGGAAGGCCACCCGCCGTGAAGGGAAGTCAG +
Preference number: 6 (lower is better)
Translates to: RKESIGPGTQKW*EGRPPAVKGSQ
Trigger: CTGACTTCCCTTCACGGCGGGTGGCCTTCCCTCTCACCACTTCTGGGTCCCAGGGCCAATGGACTCTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS GCA 72 bp GCTTGGCCTGCTGCACGCCCTGTGGGTCCCCCTCGATaGGGATCAAATTGCTCTTCTCACTGTCAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: AWPAARPVGPPR*GSNCSSHCQEG
Trigger: TCCCTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS GCA 72 bp AAGACCTGGCCTCTGCGGATGACGAAGTGGCGGTGGTaGTTGGGGTCCACCAGCATGGAGTCTTCCACCACA +
Preference number: 6 (lower is better)
Translates to: KTWPLRMTKWRW*LGSTSMESSTT
Trigger: TGTGGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS GCA 72 bp ACGCTCCAGCAGTCCAGCCTTGGCCCGGTCCAAATTTaGAGCGAGGCCCGTGATGGCGATGATGTCAGACTG +
Preference number: 6 (lower is better)
Translates to: TLQQSSLGPVQI*SEARDGDDVRL
Trigger: CAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAATTTGGACCGGGCCAAGGCTGGACTGCTGGAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000470482.5
ENST00000487169.5
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGCTACAACAGAATGTGGACCTCGGG +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLLQQNVDLG
Trigger: CCCGAGGTCCACATTCTGTTGTAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417540.5
ENST00000422080.5
ENST00000427007.5
ENST00000428482.5
ENST00000452065.5
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGCTTGCCTTAGGGGACTCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLLALGDSGD
Trigger: ATCTCCAGAGTCCCCTAAGGCAAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423693.5
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGCAAGTTCTGGAAGTCGGCACCCAT +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLQVLEVGTH
Trigger: ATGGGTGCCGACTTCCAGAACTTGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444092.5
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGAACAGAATGTGGACCTCGGGGTCT +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLNRMWTSGS
Trigger: AGACCCCGAGGTCCACATTCTGTTCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449504.5
CDS GCA 72 bp GGGCTCAGAGGCACGCTCTCCCCAAACCTGGGCACCTaGACTGTGTCCAGGCCCCAGGATTTACAAATCGAG +
Preference number: 6 (lower is better)
Translates to: GLRGTLSPNLGT*TVSRPQDLQIE
Trigger: CTCGATTTGTAAATCCTGGGGCCTGGACACAGTGCAGGTGCCCAGGTTTGGGGAGAGCGTGCCTCTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS CCA 72 bp ACCCCGCCATACTCTTCAGCAATCTCCCGCAAGACCTaGCCTCTGCGGATGACGAAGTGGCGGTGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: TPPYSSAISRKT*PLRMTKWRWCL
Trigger: CAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGAGATTGCTGAAGAGTATGGCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CAA 72 bp TGCACGCCCTGTGGGTCCCCCTCGATGCGGATCAAATaGCTCTTCTCACTGTCAGGAGGGATGCGCACGGAC +
Preference number: 6 (lower is better)
Translates to: CTPCGSPSMRIK*LFSLSGGMRTD
Trigger: GTCCGTGCGCATCCCTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CAA 72 bp GAGCGGATCAGACGGCCCTTGGTGCCAATGAGGGAGTaGTGCAGCTTGGCAGGGATGGAGACCTCTACCTCG +
Preference number: 6 (lower is better)
Translates to: ERIRRPLVPMRE*CSLAGMETSTS
Trigger: CGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS CAA 90 bp TTGGCCTGCTGCACGCCCTGTGGGTCCCCCTCGATGCGGATCAAATaGCTCTTCTCACTGTCAGGAGGGATGCGCACGGACACCTTGTAC +
Preference number: 6 (lower is better)
Translates to: LACCTPCGSPSMRIK*LFSLSGGMRTDTLY
Trigger: GTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAGCAATTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CAA 90 bp GTACGCTCATTTTCCATGCGAGATGCAAGCTCCAGCAGCTCTCGCTaGGCCTGCTGCACGCCCTGTGGGTCCCCCTCGATGCGGATCAAA +
Preference number: 6 (lower is better)
Translates to: VRSFSMRDASSSSSR*ACCTPCGSPSMRIK
Trigger: TTTGATCCGCATCGAGGGGGACCCACAGGGCGTGCAGCAGGCCAAGCGAGAGCTGCTGGAGCTTGCATCTCGCATGGAAAATGAGCGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000476807.5
ENST00000477477.1
ENST00000487169.5
ENST00000498595.5
CDS CAA 90 bp GAGCGGATCAGACGGCCCTTGGTGCCAATGAGGGAGTTGTGCAGCTaGGCAGGGATGGAGACCTCTACCTCGGCTATGTTGGCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: ERIRRPLVPMRELCS*AGMETSTSAMLARS
Trigger: AGACCTGGCCAACATAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000487169.5
CDS CAA 90 bp CGGACGGCGTCCTCCTTTCCAATGATGGTGATCAGGTCCTGGTCCTaGTCCTCAGCCGCAGGGAAGATGACACGTGCTCCAGTGCTGTCG +
Preference number: 6 (lower is better)
Translates to: RTASSFPMMVIRSWS*SSAAGKMTRAPVLS
Trigger: CGACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGATCACCATCATTGGAAAGGAGGACGCCGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000459788.1
ENST00000479169.5
ENST00000487169.5
CDS CAA 90 bp CTGACACCACGTGCCTTCTCCTCCGCCAGATGCAGGAGCTGCTTCTaGGCCTTCTCCACATCCGAGGAAGGGCCCCTGATAACAACGGTG +
Preference number: 6 (lower is better)
Translates to: LTPRAFSSARCRSCF*AFSTSEEGPLITTV
Trigger: CACCGTTGTTATCAGGGGCCCTTCCTCGGATGTGGAGAAGGCCAAGAAGCAGCTCCTGCATCTGGCGGAGGAGAAGGCACGTGGTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS TCA 72 bp CGAGGAAGGGCCCCTGATAACAACGGTGTCGCTTCCTaGACCTTCCACGGGAAAGTGAATGTGGACCCCGCC +
Preference number: 6 (lower is better)
Translates to: RGRAPDNNGVAS*TFHGKVNVDPA
Trigger: GGCGGGGTCCACATTCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGTTATCAGGGGCCCTTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS TCA 72 bp AGCCATGGGTTTGCAGAGCTCAAGGTCGTGTCACAGTaGAAGCCAGGCTGCTCACCTGGGGCTCAGAGGCAC +
Preference number: 6 (lower is better)
Translates to: SHGFAELKVVSQ*KPGCSPGAQRH
Trigger: GTGCCTCTGAGCCCCAGGTGAGCAGCCTGGCTTTCACTGTGACACGACCTTGAGCTCTGCAAACCCATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS GCA 72 bp CTGGTCCTTGTCCTCAGCCGCAGGGAAGATGACACGTaGTCCAGTGCTGTCGCGCACCTTGCGAATTTTGCC +
Preference number: 6 (lower is better)
Translates to: LVLVLSRREDDT*SSAVAHLANFA
Trigger: GGCAAAATTCGCAAGGTGCGCGACAGCACTGGAGCACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000459788.1
ENST00000479169.5
ENST00000487169.5
CDS CCA 72 bp GGTCGGATCTTGTTCCCCCAGGCTCCAGCGGGTTCCTaGGCACTTTCCAGGCAAGCAGCTTTCTCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: GRILFPQAPAGS*ALSRQAAFSGS
Trigger: ACTTCCTGAGAAAGCTGCTTGCCTGGAAAGTGCCCAGGAACCCGCTGGAGCCTGGGGGAACAAGATCCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000413241.5
ENST00000422933.5
ENST00000423693.5
ENST00000425989.5
ENST00000426343.5
ENST00000427183.6
ENST00000428482.5
ENST00000430918.5
ENST00000441124.5
ENST00000442714.5
ENST00000444092.5
ENST00000449864.5
ENST00000452065.5
CDS CCA 72 bp GTCAGCCTGCCAGCTTTTGCTTGCCTTAGGGGACTCTaGAGATGGGAGGCTGGCGACCACATGTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: VSLPAFACLRGL*RWEAGDHMCSS
Trigger: TGAGGAGCACATGTGGTCGCCAGCCTCCCATCTCCAGAGTCCCCTAAGGCAAGCAAAAGCTGGCAGGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423693.5
CDS CCA 72 bp AGAAAGCAGAGGGAGCGCGCCCCGCAAGAACCCGAGTaGAAACAACCGAAGACCAGAAAGGGAGCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: RKQRERAPQEPE*KQPKTRKGAGR
Trigger: CCTTCCTGCTCCCTTTCTGGTCTTCGGTTGTTTCCACTCGGGTTCTTGCGGGGCGCGCTCCCTCTGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442714.5
CDS CCA 72 bp GCCTCACCAGTATGTGCGACAGCCCCGCCTCTCACATaGGAGGCGCCACTATTAACAAGCAGAGCAGGGCTA +
Preference number: 6 (lower is better)
Translates to: ASPVCATAPPLT*EAPLLTSRAGL
Trigger: TAGCCCTGCTCTGCTTGTTAATAGTGGCGCCTCCCATGTGAGAGGCGGGGCTGTCGCACATACTGGTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS CCA 72 bp CGCTGGGCGGCTGAACCAGAAGAAGGGTTGTTGTGCTaGGCTCTGACCTACAACAGAATGTGGACCTCGGGG +
Preference number: 6 (lower is better)
Translates to: RWAAEPEEGLLC*ALTYNRMWTSG
Trigger: CCCCGAGGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS CCA 72 bp ACTCGGGAGAGGATGCGACAGGCCACTCCTGTGACATaGCCTCCCGGGAAAGGGGTCTACCTCAAACTCATC +
Preference number: 6 (lower is better)
Translates to: TRERMRQATPVT*PPGKGVYLKLI
Trigger: GATGAGTTTGAGGTAGACCCCTTTCCCGGGAGGCCATGTCACAGGAGTGGCCTGTCGCATCCTCTCCCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS CCA 72 bp GACGTTCAGGACCCCAGAGAACAGGAAAGAGTCCATTaGCCCTGGGACCCAGAAGTGGTGAGAGGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: DVQDPREQERVH*PWDPEVVRGKA
Trigger: GGCCTTCCCTCTCACCACTTCTGGGTCCCAGGGCCAATGGACTCTTTCCTGTTCTCTGGGGTCCTGAACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS CAA 72 bp ACCTGGCCTCTGCGGATGACGAAGTGGCGGTGGTGCTaGGGGTCCACCAGCATGGAGTCTTCCACCACATTA +
Preference number: 6 (lower is better)
Translates to: TWPLRMTKWRWC*GSTSMESSTTL
Trigger: TAATGTGGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CAA 72 bp CGTTTCTTGGCTGCCTCCACACAGTCCTTGGCGCCCTaGAGGGTGACTTTGTCGCTCTGTGTGCCAGAGCGT +
Preference number: 6 (lower is better)
Translates to: RFLAASTQSLAP*RVTLSLCVPER
Trigger: ACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGCAGCCAAGAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000483086.1
ENST00000487169.5
CDS CAA 90 bp TCCCGCAAGACCTGGCCTCTGCGGATGACGAAGTGGCGGTGGTGCTaGGGGTCCACCAGCATGGAGTCTTCCACCACATTATCCAGGTTT +
Preference number: 6 (lower is better)
Translates to: SRKTWPLRMTKWRWC*GSTSMESSTTLSRF
Trigger: AAACCTGGATAATGTGGTGGAAGACTCCATGCTGGTGGACCCCAAGCACCACCGCCACTTCGTCATCCGCAGAGGCCAGGTCTTGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000487169.5
CDS CAA 90 bp TCCCGTACCCCACATAACCGCTGGGCGGCTGAACCAGAAGAAGGGTaGTTGTGCTGGGCTCTGACCTACAACAGAATGTGGACCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SRTPHNRWAAEPEEG*LCWALTYNRMWTSG
Trigger: CCCCGAGGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATGTGGGGTACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS CAA 90 bp TCCATGATGGAGCGGATCAGACGGCCCTTGGTGCCAATGAGGGAGTaGTGCAGCTTGGCAGGGATGGAGACCTCTACCTCGGCTATGTTG +
Preference number: 6 (lower is better)
Translates to: SMMERIRRPLVPMRE*CSLAGMETSTSAML
Trigger: CAACATAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCTGATCCGCTCCATCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS CAA 90 bp CGTACCCCACATAACCGCTGGGCGGCTGAACCAGAAGAAGGGTTGTaGTGCTGGGCTCTGACCTACAACAGAATGTGGACCTCGGGGTCT +
Preference number: 6 (lower is better)
Translates to: RTPHNRWAAEPEEGL*CWALTYNRMWTSGS
Trigger: AGACCCCGAGGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATGTGGGGTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS TCA 72 bp GGTGAAGCCAGGAAGGGGCGGCGACAGAGGAGACGGTaGAGCTATTGGCCTTGGCATAGACTTCAGTCAACG +
Preference number: 6 (lower is better)
Translates to: GEARKGRRQRRR*SYWPWHRLQST
Trigger: CGTTGACTGAAGTCTATGCCAAGGCCAATAGCTTCACCGTCTCCTCTGTCGCCGCCCCTTCCTGGCTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000453141.5
ENST00000477477.1
CDS TCA 72 bp ACAACGGTGTCGCTTCCTGAACCTTCCACGGGAAAGTaGATGTGGACCCCGCCGCACTCCTCCATGATGGAG +
Preference number: 6 (lower is better)
Translates to: TTVSLPEPSTGK*MWTPPHSSMME
Trigger: CTCCATCATGGAGGAGTGCGGCGGGGTCCACATTCACTTTCCCGTGGAAGGTTCAGGAAGCGACACCGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGCTCTATCTGTTCCAATGGATCTGG +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLLYLFQWIW
Trigger: CCAGATCCATTGGAACAGATAGAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430918.5
CDS GCA 72 bp GCCCGTGATGGCGATGATGTCAGACTGCAGCTCAGGTaGCGGGACATGTATGTTCACCTACGTGAAGAGGGG +
Preference number: 6 (lower is better)
Translates to: ARDGDDVRLQLR*RDMYVHLREEG
Trigger: CCCCTCTTCACGTAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470482.5
ENST00000487169.5
CDS GCA 72 bp GCAGCATCCAGTACGCAGGTGGCACTCGACACTGACTaGACACAAGGTGAGCTAGGCCTGATAACCCCACTC +
Preference number: 6 (lower is better)
Translates to: AASSTQVALDTD*TQGELGLITPL
Trigger: GAGTGGGGTTATCAGGCCTAGCTCACCTTGTGTGCAGTCAGTGTCGAGTGCCACCTGCGTACTGGATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS CCA 72 bp CTTGAGGGTGACTTTGTCGCTCTGTGTGCCAGAGCGTaGGAAGCTGACCATCACCCCGCCATACTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LEGDFVALCARA*EADHHPAILFS
Trigger: GCTGAAGAGTATGGCGGGGTGATGGTCAGCTTCCCACGCTCTGGCACACAGAGCGACAAAGTCACCCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000483086.1
ENST00000487169.5
CDS CCA 72 bp ACACCCGAGGATGAGGCTGCACGCTCCTCATCGCCTTaGGACTGGCTACCTTGTGTGTCTCTAGGACCTATG +
Preference number: 6 (lower is better)
Translates to: TPEDEAARSSSP*DWLPCVSLGPM
Trigger: CATAGGTCCTAGAGACACACAAGGTAGCCAGTCCCAAGGCGATGAGGAGCGTGCAGCCTCATCCTCGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS CAA 72 bp AGACGGCCCTTGGTGCCAATGAGGGAGTTGTGCAGCTaGGCAGGGATGGAGACCTCTACCTCGGCTATGTTG +
Preference number: 6 (lower is better)
Translates to: RRPLVPMRELCS*AGMETSTSAML
Trigger: CAACATAGCCGAGGTAGAGGTCTCCATCCCTGCCAAGCTGCACAACTCCCTCATTGGCACCAAGGGCCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000459788.1
ENST00000471294.1
ENST00000487169.5
CDS CAA 72 bp GGCTGCACGCTCCTCATCGCCTTGGGACTGGCTACCTaGTGTGTCTCTAGGACCTATGAAGGTCACCTGGTC +
Preference number: 6 (lower is better)
Translates to: GCTLLIALGLAT*CVSRTYEGHLV
Trigger: GACCAGGTGACCTTCATAGGTCCTAGAGACACACAAGGTAGCCAGTCCCAAGGCGATGAGGAGCGTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS TCA 72 bp CCAGGCCCCAGGATTTACAAATCGAGAGCTCATCCATaGAGGCCCCGCGGACTCCACTCAAAGGAGACACAC +
Preference number: 6 (lower is better)
Translates to: PGPRIYKSRAHP*RPRGLHSKETH
Trigger: GTGTGTCTCCTTTGAGTGGAGTCCGCGGGGCCTTCATGGATGAGCTCTCGATTTGTAAATCCTGGGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS TCA 72 bp CTCTACGACGGGGCTCATGCGATCCAAACGATGTCATaGGAATCACTGGGACTGAACTCGGGACACCCGAGG +
Preference number: 6 (lower is better)
Translates to: LYDGAHAIQTMS*ESLGLNSGHPR
Trigger: CCTCGGGTGTCCCGAGTTCAGTCCCAGTGATTCTCATGACATCGTTTGGATCGCATGAGCCCCGTCGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS TCA 72 bp CGGCTGAACCAGAAGAAGGGTTGTTGTGCTGGGCTCTaGCCTACAACAGAATGTGGACCTCGGGGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: RLNQKKGCCAGL*PTTECGPRGLC
Trigger: GCAGAGACCCCGAGGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS GCA 72 bp CAGGTCCTCAATGATCTCCTGAATGCGTTTCTTGGCTaGCTCCACACAGTCCTTGGCGCCCTTGAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: QVLNDLLNAFLG*LHTVLGALEGD
Trigger: GTCACCCTCAAGGGCGCCAAGGACTGTGTGGAGGCAGCCAAGAAACGCATTCAGGAGATCATTGAGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000483086.1
ENST00000487169.5
CDS GCA 72 bp TTTGCAGCGAGGCCCGTGATGGCGATGATGTCAGACTaGAGCTCAGGTGCCGGGACATGTATGTTCACCTCA +
Preference number: 6 (lower is better)
Translates to: FAARPVMAMMSD*SSGAGTCMFTS
Trigger: TGAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000479894.1
CDS GCA 72 bp AGGGGACTCTGGAGATGGGAGGCTGGCGACCACATGTaGTCCTCAACCATGAAAAGGTGGAACTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: RGLWRWEAGDHM*SSTMKRWNCCS
Trigger: GGAACAGCAGTTCCACCTTTTCATGGTTGAGGAGCACATGTGGTCGCCAGCCTCCCATCTCCAGAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428482.5
CDS GCA 72 bp TTTGCAGCGAGGCCCGTGATGGCGATGATGTCAGACTaGAGCTCAGGTGCCGGGACATGTATGTTCACCTAC +
Preference number: 6 (lower is better)
Translates to: FAARPVMAMMSD*SSGAGTCMFTY
Trigger: GTAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGCCTCGCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470482.5
ENST00000487169.5
CDS GCA 72 bp AACCGCTGGGCGGCTGAACCAGAAGAAGGGTTGTTGTaGTGGGCTCTGACCTACAACAGAATGTGGACCTCG +
Preference number: 6 (lower is better)
Translates to: NRWAAEPEEGLL*WALTYNRMWTS
Trigger: CGAGGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS CCA 72 bp ACGGCGTCCTCCTTTCCAATGATGGTGATCAGGTCCTaGTCCTTGTCCTCAGCCGCAGGGAAGATGACACGT +
Preference number: 6 (lower is better)
Translates to: TASSFPMMVIRS*SLSSAAGKMTR
Trigger: ACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGATCACCATCATTGGAAAGGAGGACGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000459788.1
ENST00000479169.5
ENST00000487169.5
CDS CCA 72 bp CACAGTGACGCAGTTGGGGTCTGGGGCTCCGCTCTGTaGGAAGCGAATGTCCACCTTGAATTCGTCCATGAT +
Preference number: 6 (lower is better)
Translates to: HSDAVGVWGSAL*EANVHLEFVHD
Trigger: ATCATGGACGAATTCAAGGTGGACATTCGCTTCCCACAGAGCGGAGCCCCAGACCCCAACTGCGTCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000442730.1
ENST00000484412.1
ENST00000487169.5
ENST00000488013.1
CDS CCA 72 bp TGGCTGGATCATCTTTCCCGTACCCCACATAACCGCTaGGCGGCTGAACCAGAAGAAGGGTTGTTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: WLDHLSRTPHNR*AAEPEEGLLCW
Trigger: CCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATGTGGGGTACGGGAAAGATGATCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441124.5
ENST00000458564.5
ENST00000490697.1
CDS CCA 72 bp GGGCCCATGCTGCTGCCCAGAGACCCCATCTACTGTTaGCTCAGATTCACACTGAGCACTTCACTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: GPMLLPRDPIYC*LRFTLSTSLCL
Trigger: CAGACACAGTGAAGTGCTCAGTGTGAATCTGAGCCAACAGTAGATGGGGTCTCTGGGCAGCAGCATGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5
CDS CCA 72 bp AGGAGGCAGAGTCAACAGGAAGTTGAGAAAGGACACTaGCACTCGGGAGAGGATGCGACAGGCCACTCCTGT +
Preference number: 6 (lower is better)
Translates to: RRQSQQEVEKGH*HSGEDATGHSC
Trigger: ACAGGAGTGGCCTGTCGCATCCTCTCCCGAGTGCCAGTGTCCTTTCTCAACTTCCTGTTGACTCTGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS CAA 90 bp GAGCCTTGTGGGGCCCATGCTGCTGCCCAGAGACCCCATCTACTGTaGGCTCAGATTCACACTGAGCACTTCACTGTGTCTGCAAGACAA +
Preference number: 6 (lower is better)
Translates to: EPCGAHAAAQRPHLL*AQIHTEHFTVSARQ
Trigger: TTGTCTTGCAGACACAGTGAAGTGCTCAGTGTGAATCTGAGCCAACAGTAGATGGGGTCTCTGGGCAGCAGCATGGGCCCCACAAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5
CDS CAA 90 bp AGGTGCCGGGACATGTATGTTCACCTACGTGAAGAGGGGGCTGACTaGACGTTCAGGACCCCAGAGAACAGGAAAGAGTCCATTGGCCCT +
Preference number: 6 (lower is better)
Translates to: RCRDMYVHLREEGAD*TFRTPENRKESIGP
Trigger: AGGGCCAATGGACTCTTTCCTGTTCTCTGGGGTCCTGAACGTCAAGTCAGCCCCCTCTTCACGTAGGTGAACATACATGTCCCGGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS TCA 72 bp GATGGGAGGCTGGCGACCACATGTGCTCCTCAACCATaGAAAGGTGGAACTGCTGACAGGAGTGAGGCATGT +
Preference number: 6 (lower is better)
Translates to: DGRLATTCAPQP*KGGTADRSEAC
Trigger: ACATGCCTCACTCCTGTCAGCAGTTCCACCTTTTCATGGTTGAGGAGCACATGTGGTCGCCAGCCTCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000417540.5
ENST00000422080.5
ENST00000423693.5
ENST00000427007.5
ENST00000449504.5
ENST00000452065.5
ENST00000490697.1
ENST00000496569.1
CDS GCA 72 bp GCCAGAAGGTCCGTCCTGAGGCCGCCTCTGTCAGCCTaGCAGCTTTTGCTGTTCCACTCTTATAAGCATAAG +
Preference number: 6 (lower is better)
Translates to: ARRSVLRPPLSA*QLLLFHSYKHK
Trigger: CTTATGCTTATAAGAGTGGAACAGCAAAAGCTGGCAGGCTGACAGAGGCGGCCTCAGGACGGACCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310931.10
ENST00000413241.5
ENST00000420451.5
CDS GCA 72 bp AAAGGGCACCTCTACTTCAATGGTGACAGGAACCAATaGCTGCAGGGAGGATGGTCATGGTTAGGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: KGHLYFNGDRNQ*LQGGWSWLGRG
Trigger: CCCACGGCCTAACCATGACCATCCTCCCTGCAGGCATTGGTTCCTGTCACCATTGAAGTAGAGGTGCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483086.1
CDS CCA 72 bp TTTCTAATCCACTGGGGATCTTGCCTTAGGGGACTCTaGAGATGGGAGGCTGGCGACCACATGTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: FLIHWGSCLRGL*RWEAGDHMCSS
Trigger: TGAGGAGCACATGTGGTCGCCAGCCTCCCATCTCCAGAGTCCCCTAAGGCAAGATCCCCAGTGGATTAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417540.5
ENST00000427007.5
ENST00000428482.5
CDS CAA 72 bp TCCTCCTTTCCAATGATGGTGATCAGGTCCTGGTCCTaGTCCTCAGCCGCAGGGAAGATGACACGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: SSFPMMVIRSWS*SSAAGKMTRAP
Trigger: TGGAGCACGTGTCATCTTCCCTGCGGCTGAGGACAAGGACCAGGACCTGATCACCATCATTGGAAAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000459788.1
ENST00000479169.5
ENST00000487169.5
CDS CAA 72 bp CATAACCGCTGGGCGGCTGAACCAGAAGAAGGGTTGTaGTGCTGGGCTCTGACCTACAACAGAATGTGGACC +
Preference number: 6 (lower is better)
Translates to: HNRWAAEPEEGL*CWALTYNRMWT
Trigger: GGTCCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS CAA 72 bp CCACATAACCGCTGGGCGGCTGAACCAGAAGAAGGGTaGTTGTGCTGGGCTCTGACCTACAACAGAATGTGG +
Preference number: 6 (lower is better)
Translates to: PHNRWAAEPEEG*LCWALTYNRMW
Trigger: CCACATTCTGTTGTAGGTCAGAGCCCAGCACAACAACCCTTCTTCTGGTTCAGCCGCCCAGCGGTTATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490697.1
CDS TCA 72 bp CCAGAAGCTGGAAATGCCCCGAGACCTTCAAATAACTaGCGGTTGGGGCCACTCAGTCTGGGATTTAGCTCG +
Preference number: 6 (lower is better)
Translates to: PEAGNAPRPSNN*RLGPLSLGFSS
Trigger: CGAGCTAAATCCCAGACTGAGTGGCCCCAACCGTCAGTTATTTGAAGGTCTCGGGGCATTTCCAGCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5
CDS GCA 72 bp GCCCGTGATGGCGATGATGTCAGACTGCAGCTCAGGTaGCGGGACATGTATGTTCACCTCAAACTCATCCAT +
Preference number: 6 (lower is better)
Translates to: ARDGDDVRLQLR*RDMYVHLKLIH
Trigger: ATGGATGAGTTTGAGGTGAACATACATGTCCCGGCACCTGAGCTGCAGTCTGACATCATCGCCATCACGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000479894.1
CDS GCA 72 bp CTGTGTCTGCAAGACAAGTGCTGTTGCAAACCCTCCTaGTGTCAACCTCTCTGGATAGAACCCAGTACCCCC +
Preference number: 6 (lower is better)
Translates to: LCLQDKCCCKPS*CQPLWIEPSTP
Trigger: GGGGGTACTGGGTTCTATCCAGAGAGGTTGACAGCAGGAGGGTTTGCAACAGCACTTGTCTTGCAGACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5
CDS CCA 72 bp CGTTTGTCCTGCTCGGCAGAGATGAGTAAGACTTCATaGCGAGCTTTCTCGATGCCCTCTTTGGTGCCAGTG +
Preference number: 6 (lower is better)
Translates to: RLSCSAEMSKTS*RAFSMPSLVPV
Trigger: CACTGGCACCAAAGAGGGCATCGAGAAAGCTCGCCATGAAGTCTTACTCATCTCTGCCGAGCAGGACAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000422933.5
ENST00000427183.6
ENST00000453141.5
ENST00000470710.1
CDS CAA 72 bp GGGAAGCGAATGTCCACCTTGAATTCGTCCATGATTTaGCGAATGGCTTTGCCGCGGGCACCAATGATGCGG +
Preference number: 6 (lower is better)
Translates to: GKRMSTLNSSMI*RMALPRAPMMR
Trigger: CCGCATCATTGGTGCCCGCGGCAAAGCCATTCGCAAAATCATGGACGAATTCAAGGTGGACATTCGCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000442730.1
ENST00000484412.1
ENST00000487169.5
ENST00000488013.1
CDS CAA 72 bp CTCTGTCAGCCTGCCAGCTTTTGCGTGACAATAATCTaGCCCTTACGACACATGGGTCCGGAGCTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: LCQPASFCVTII*PLRHMGPELRR
Trigger: CCTTCTCAGCTCCGGACCCATGTGTCGTAAGGGCAAGATTATTGTCACGCAAAAGCTGGCAGGCTGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462130.1
CDS TCA 72 bp AGAATGTGGACCTCGGGGTCTCTGCAGCGCTTATGGTaGCCAAGAGCTACCGTCTTCAAGAATTCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: RMWTSGSLQRLW*PRATVFKNSPS
Trigger: AGACGGAGAATTCTTGAAGACGGTAGCTCTTGGTCACCATAAGCGCTGCAGAGACCCCGAGGTCCACATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417540.5
ENST00000422080.5
ENST00000427007.5
ENST00000428482.5
ENST00000449504.5
ENST00000452065.5
ENST00000490697.1
CDS GCA 72 bp GCTTTTGCTACAACAGAATGTGGACCTCGGGGTCTCTaGAGCGCTTATGGTGACCAAGAGCTACCGTCTTCA +
Preference number: 6 (lower is better)
Translates to: AFATTECGPRGL*SAYGDQELPSS
Trigger: TGAAGACGGTAGCTCTTGGTCACCATAAGCGCTGCAGAGACCCCGAGGTCCACATTCTGTTGTAGCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417540.5
ENST00000422080.5
ENST00000427007.5
ENST00000428482.5
ENST00000452065.5
CDS CCA 72 bp CATTGTCTAGAATGGGGGCCAGTTATGATCTTCACCTaGATCACAAGGGTTCTGGAGGACAGGCTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: HCLEWGPVMIFT*ITRVLEDRLSA
Trigger: GGCTGAGAGCCTGTCCTCCAGAACCCTTGTGATCCAGGTGAAGATCATAACTGGCCCCCATTCTAGACAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS CAA 72 bp GACATGTATGTTCACCTACGTGAAGAGGGGGCTGACTaGACGTTCAGGACCCCAGAGAACAGGAAAGAGTCC +
Preference number: 6 (lower is better)
Translates to: DMYVHLREEGAD*TFRTPENRKES
Trigger: GGACTCTTTCCTGTTCTCTGGGGTCCTGAACGTCAAGTCAGCCCCCTCTTCACGTAGGTGAACATACATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS CAA 90 bp GGCAAGCAGCTTTCTCAGGAAGTGGAGGGAAGGCATCCTTGTAGGTaGGAGGGTCGCTCTCCTCTTCTGAATTTAGAGTGGCAACAATGG +
Preference number: 6 (lower is better)
Translates to: GKQLSQEVEGRHPCR*EGRSPLLNLEWQQW
Trigger: CCATTGTTGCCACTCTAAATTCAGAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCCTTCCCTCCACTTCCTGAGAAAGCTGCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449864.5
CDS TCA 72 bp GAGAGGCCTTGGTCTTTGGCCAAAGACAGCTCCAAGTaGGCACCAGTTCTCTGCATGATCTCAAGGCAGATT +
Preference number: 6 (lower is better)
Translates to: ERPWSLAKDSSK*APVLCMISRQI
Trigger: AATCTGCCTTGAGATCATGCAGAGAACTGGTGCTCACTTGGAGCTGTCTTTGGCCAAAGACCAAGGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000422933.5
ENST00000427183.6
ENST00000428482.5
ENST00000430918.5
ENST00000441124.5
ENST00000444092.5
ENST00000452065.5
ENST00000453141.5
CDS TCA 72 bp CAGAAAACTGCTGACCAACTCATCAGTAGCCTGGATTaGAAGGTGCAATCTTCCACATCAGCCTGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: QKTADQLISSLD*KVQSSTSACAG
Trigger: GCCAGCGCAGGCTGATGTGGAAGATTGCACCTTTCAATCCAGGCTACTGATGAGTTGGTCAGCAGTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460826.1
CDS TCA 72 bp CAGGAGGGATGCGCACGGACACCTTGTACTGGTCTTTaGTTCTGTTTACTGGATCACAAGGGTTCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: QEGCARTPCTGL*FCLLDHKGSGG
Trigger: TCCTCCAGAACCCTTGTGATCCAGTAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476807.5
CDS TCA 72 bp ATATCTGCGTTGACTGCTTGTCTCTCCACGGCAACGTaGGAACTATTTTTGTGTGCTGTGGCACCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: ISALTACLSTAT*ELFLCAVAPQH
Trigger: GTGCTGCGGTGCCACAGCACACAAAAATAGTTCTCACGTTGCCGTGGAGAGACAAGCAGTCAACGCAGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS TCA 72 bp ACATGTATGTTCACCTACGTGAAGAGGGGGCTGACTTaGCGTTCAGGACCCCAGAGAACAGGAAAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: TCMFTYVKRGLT*RSGPQRTGKSP
Trigger: TGGACTCTTTCCTGTTCTCTGGGGTCCTGAACGTCAAGTCAGCCCCCTCTTCACGTAGGTGAACATACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS GCA 72 bp GGCTTGGCGCGGATGTCAACAGTGAAACTCTTGGTTTaGTGCAGAAACCAATCCCACTGTGTTAGCCTGACA +
Preference number: 6 (lower is better)
Translates to: GLARMSTVKLLV*CRNQSHCVSLT
Trigger: TGTCAGGCTAACACAGTGGGATTGGTTTCTGCAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS CCA 72 bp CCAACCAGTCTATTATACGGCCCAGCGATGAAGGGGTaGAATGCCTTTTCTACTTCTAGCCTCTCCACAGCA +
Preference number: 6 (lower is better)
Translates to: PTSLLYGPAMKG*NAFSTSSLSTA
Trigger: TGCTGTGGAGAGGCTAGAAGTAGAAAAGGCATTCCACCCCTTCATCGCTGGGCCGTATAATAGACTGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000453141.5
ENST00000470710.1
CDS CCA 72 bp CCTGATGTTCCAGATGGTATTTGTCCAGTGGACTATTaGTGCTGTGAGGGCAGGGCACATGTTGTCACCCAT +
Preference number: 6 (lower is better)
Translates to: PDVPDGICPVDY*CCEGRAHVVTH
Trigger: ATGGGTGACAACATGTGCCCTGCCCTCACAGCACCAATAGTCCACTGGACAAATACCATCTGGAACATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425989.5
CDS CCA 72 bp GACAGAGGAGACGGTGAAGCTATTGGCCTAAGAAAATaGGAGAACAGCCATGGGTTTGCAGAGCTCAAGGTC +
Preference number: 6 (lower is better)
Translates to: DRGDGEAIGLRK*ENSHGFAELKV
Trigger: GACCTTGAGCTCTGCAAACCCATGGCTGTTCTCCCATTTTCTTAGGCCAATAGCTTCACCGTCTCCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000498595.5
CDS CAA 72 bp CTTTCTCAGGAAGTGGAGGGAAGGCATCCTTGTAGGTaGGAGGGTCGCTCTCCTCTTCTGAATTTAGAGTGG +
Preference number: 6 (lower is better)
Translates to: LSQEVEGRHPCR*EGRSPLLNLEW
Trigger: CCACTCTAAATTCAGAAGAGGAGAGCGACCCTCCAACCTACAAGGATGCCTTCCCTCCACTTCCTGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000413241.5
ENST00000420451.5
ENST00000422080.5
ENST00000422933.5
ENST00000423693.5
ENST00000425989.5
ENST00000426343.5
ENST00000427183.6
ENST00000428482.5
ENST00000430918.5
ENST00000441124.5
ENST00000442714.5
ENST00000444092.5
ENST00000449864.5
ENST00000452065.5
CDS CAA 72 bp CTCTTCTCACTGTCAGGAGGGATGCGCACGGACACCTaGTACTGGTCTTTGATTCTGTTTATGTTGGCACCG +
Preference number: 6 (lower is better)
Translates to: LFSLSGGMRTDT*YWSLILFMLAP
Trigger: CGGTGCCAACATAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS CAA 72 bp AGAATCCTGCTCCGGGCAGCTTCGCAGTTGGCTCGCTaGCCTGTGATGATAATGGTCTCTGAATTGCTATTC +
Preference number: 6 (lower is better)
Translates to: RILLRAASQLAR*PVMIMVSELLF
Trigger: GAATAGCAATTCAGAGACCATTATCATCACAGGCAAGCGAGCCAACTGCGAAGCTGCCCGGAGCAGGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000452931.1
ENST00000460826.1
ENST00000487169.5
ENST00000488923.1
CDS CAA 72 bp TCAGGAGGGATGCGCACGGACACCTTGTACTGGTCTTaGATTCTGTTTACTGGATCACAAGGGTTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: SGGMRTDTLYWS*ILFTGSQGFWR
Trigger: CCTCCAGAACCCTTGTGATCCAGTAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476807.5
CDS CAA 90 bp CAGATTCACACTGAGCACTTCACTGTGTCTGCAAGACAAGTGCTGTaGCAAACCCTCCTGCTGTCAACCTCTCTGGATAGAACCCAGTAC +
Preference number: 6 (lower is better)
Translates to: QIHTEHFTVSARQVL*QTLLLSTSLDRTQY
Trigger: GTACTGGGTTCTATCCAGAGAGGTTGACAGCAGGAGGGTTTGCAACAGCACTTGTCTTGCAGACACAGTGAAGTGCTCAGTGTGAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5
CDS TCA 72 bp TTCGCCTCGAAGTATTACAGTCTCAGAGATGCTGTCTaGGGGTGGGATCTCAACGGAAACTCCAGTTCTCTC +
Preference number: 6 (lower is better)
Translates to: FASKYYSLRDAV*GWDLNGNSSSL
Trigger: GAGAGAACTGGAGTTTCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAGACTGTAATACTTCGAGGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000453141.5
ENST00000467435.1
ENST00000470710.1
CDS TCA 72 bp TCCAGATGGTATTTGTCCAGTGGACTATTGGTGCTGTaGGGGCAGGGCACATGTTGTCACCCATACTCATTG +
Preference number: 6 (lower is better)
Translates to: SRWYLSSGLLVL*GQGTCCHPYSL
Trigger: CAATGAGTATGGGTGACAACATGTGCCCTGCCCTCACAGCACCAATAGTCCACTGGACAAATACCATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425989.5
CDS TCA 72 bp CCAGAGACCCCATCTACTGTTGGCTCAGATTCACACTaGGCACTTCACTGTGTCTGCAAGACAAGTGCTGTT +
Preference number: 6 (lower is better)
Translates to: PETPSTVGSDSH*ALHCVCKTSAV
Trigger: AACAGCACTTGTCTTGCAGACACAGTGAAGTGCTCAGTGTGAATCTGAGCCAACAGTAGATGGGGTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5
CDS GCA 72 bp TTTCAGGTTCGCCTCGAAGTATTACAGTCTCAGAGATaGTGTCTGAGGGTGGGATCTCAACGGAAACTCCAG +
Preference number: 6 (lower is better)
Translates to: FQVRLEVLQSQR*CLRVGSQRKLQ
Trigger: CTGGAGTTTCCGTTGAGATCCCACCCTCAGACAGCATCTCTGAGACTGTAATACTTCGAGGCGAACCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000453141.5
ENST00000467435.1
ENST00000470710.1
CDS GCA 72 bp GATGTTCCAGATGGTATTTGTCCAGTGGACTATTGGTaGTGTGAGGGCAGGGCACATGTTGTCACCCATACT +
Preference number: 6 (lower is better)
Translates to: DVPDGICPVDYW*CEGRAHVVTHT
Trigger: AGTATGGGTGACAACATGTGCCCTGCCCTCACAGCACCAATAGTCCACTGGACAAATACCATCTGGAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425989.5
CDS GCA 72 bp TTGGCGCGGATGTCAACAGTGAAACTCTTGGTTTGCTaGAGAAACCAATCCCACTGTGTTAGCCTGACACCA +
Preference number: 6 (lower is better)
Translates to: LARMSTVKLLVC*RNQSHCVSLTP
Trigger: TGGTGTCAGGCTAACACAGTGGGATTGGTTTCTGCAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS CCA 72 bp TCACTGTCAGGAGGGATGCGCACGGACACCTTGTACTaGTCTTTGATTCTGTTTACTGGATCACAAGGGTTC +
Preference number: 6 (lower is better)
Translates to: SLSGGMRTDTLY*SLILFTGSQGF
Trigger: GAACCCTTGTGATCCAGTAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476807.5
CDS CAA 72 bp CTGAAATCCCGAGTAATCTGCTGGATTCTGGAACCTTaGGGGCCCATGACAGATCGATGGAATTTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: LKSRVICWILEP*GPMTDRWNFWG
Trigger: ACCCCAGAAATTCCATCGATCTGTCATGGGCCCCAAAGGTTCCAGAATCCAGCAGATTACTCGGGATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000483086.1
ENST00000487169.5
CDS CAA 90 bp ATCAAATTGCTCTTCTCACTGTCAGGAGGGATGCGCACGGACACCTaGTACTGGTCTTTGATTCTGTTTATGTTGGCACCGCTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: IKLLFSLSGGMRTDT*YWSLILFMLAPLFP
Trigger: TGGGAAGAGCGGTGCCAACATAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAGCAATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
CDS CAA 90 bp GAACCAATGCCATCACTTGCCACAGGATATATCTGCGTTGACTGCTaGTCTCTCCACGGCAACGTGAGAACTATTTTTGTGTGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: EPMPSLATGYICVDC*SLHGNVRTIFVCCG
Trigger: GCCACAGCACACAAAAATAGTTCTCACGTTGCCGTGGAGAGACAAGCAGTCAACGCAGATATATCCTGTGGCAAGTGATGGCATTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS TCA 72 bp ACCAATGCCATCACTTGCCACAGGATATATCTGCGTTaGCTGCTTGTCTCTCCACGGCAACGTGAGAACTAT +
Preference number: 6 (lower is better)
Translates to: TNAITCHRIYLR*LLVSPRQRENY
Trigger: ATAGTTCTCACGTTGCCGTGGAGAGACAAGCAGTCAACGCAGATATATCCTGTGGCAAGTGATGGCATTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS GCA 72 bp ATTAACAAGCAGAGCAGGGCTAATGGGGGACCCACCTaGGTTCTCCTCTCTGTCTGGGAATTTAATTTGAAC +
Preference number: 6 (lower is better)
Translates to: INKQSRANGGPT*VLLSVWEFNLN
Trigger: GTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGGTGGGTCCCCCATTAGCCCTGCTCTGCTTGTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS CCA 72 bp AAAGGCAGAAAACTGCTGACCAACTCATCAGTAGCCTaGATTGAAAGGTGCAATCTTCCACATCAGCCTGCG +
Preference number: 6 (lower is better)
Translates to: KGRKLLTNSSVA*IERCNLPHQPA
Trigger: CGCAGGCTGATGTGGAAGATTGCACCTTTCAATCCAGGCTACTGATGAGTTGGTCAGCAGTTTTCTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460826.1
CDS CAA 72 bp TATTCTGGCTTGGCGCGGATGTCAACAGTGAAACTCTaGGTTTGCTGCAGAAACCAATCCCACTGTGTTAGC +
Preference number: 6 (lower is better)
Translates to: YSGLARMSTVKL*VCCRNQSHCVS
Trigger: GCTAACACAGTGGGATTGGTTTCTGCAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCCAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS CAA 72 bp CTCTTCTCACTGTCAGGAGGGATGCGCACGGACACCTaGTACTGGTCTTTGATTCTGTTTACTTTGGCATCT +
Preference number: 6 (lower is better)
Translates to: LFSLSGGMRTDT*YWSLILFTLAS
Trigger: AGATGCCAAAGTAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477477.1
ENST00000498595.5
CDS CAA 72 bp CTCTTCTCACTGTCAGGAGGGATGCGCACGGACACCTaGTACTGGTCTTTGATTCTGTTTACTGGATCACAA +
Preference number: 6 (lower is better)
Translates to: LFSLSGGMRTDT*YWSLILFTGSQ
Trigger: TTGTGATCCAGTAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476807.5
CDS CAA 90 bp AATTTGTGGTATTCTGGCTTGGCGCGGATGTCAACAGTGAAACTCTaGGTTTGCTGCAGAAACCAATCCCACTGTGTTAGCCTGACACCA +
Preference number: 6 (lower is better)
Translates to: NLWYSGLARMSTVKL*VCCRNQSHCVSLTP
Trigger: TGGTGTCAGGCTAACACAGTGGGATTGGTTTCTGCAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCCAGAATACCACAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS CAA 90 bp ATCAAATTGCTCTTCTCACTGTCAGGAGGGATGCGCACGGACACCTaGTACTGGTCTTTGATTCTGTTTACTGGATCACAAGGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: IKLLFSLSGGMRTDT*YWSLILFTGSQGFW
Trigger: CCAGAACCCTTGTGATCCAGTAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTGACAGTGAGAAGAGCAATTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476807.5
CDS CAA 90 bp ACGGAAACTCCAGTTCTCTCAAGGATCTCCTGCAATGAATTGCCCTaGGGCCCAATGACATACTTGTGTTGGGATTTCTTCACTTCCACT +
Preference number: 6 (lower is better)
Translates to: TETPVLSRISCNELP*GPMTYLCWDFFTST
Trigger: AGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTGAGAGAACTGGAGTTTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000470710.1
CDS CAA 90 bp GCTTCGCAGTTGGCTCGCTTGCCTGTGATGATAATGGTCTCTGAATaGCTATTCTCTGCTGGAAGGTCGATTTTGGTGTTGCTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: ASQLARLPVMIMVSE*LFSAGRSILVLLSS
Trigger: TGAAGAAAGCAACACCAAAATCGACCTTCCAGCAGAGAATAGCAATTCAGAGACCATTATCATCACAGGCAAGCGAGCCAACTGCGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000452931.1
ENST00000460826.1
ENST00000487169.5
ENST00000488923.1
CDS TCA 72 bp ACTCTCTTGGGTCAAAACTGCAACGGAACTCATGGTTaGTCTCACACCTACACACAATCCGGGAAAACCACA +
Preference number: 6 (lower is better)
Translates to: TLLGQNCNGTHG*SHTYTQSGKTT
Trigger: TGTGGTTTTCCCGGATTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000417540.5
ENST00000422080.5
ENST00000422933.5
ENST00000423693.5
ENST00000425989.5
ENST00000427007.5
ENST00000428482.5
ENST00000430918.5
ENST00000441124.5
ENST00000442714.5
ENST00000444092.5
ENST00000449504.5
ENST00000449864.5
ENST00000452065.5
ENST00000458564.5
CDS TCA 72 bp CAAGGATCTCCTGCAATGAATTGCCCTTGGGCCCAATaGCATACTTGTGTTGGGATTTCTTCACTTCCACTG +
Preference number: 6 (lower is better)
Translates to: QGSPAMNCPWAQ*HTCVGISSLPL
Trigger: CAGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000470710.1
CDS TCA 72 bp CGGATCCGTTCACCCTTCTGCCCAATGATTGTGCGATaGAATCTTTGCTCAATGATTAGATCCTTGGTACGC +
Preference number: 6 (lower is better)
Translates to: RIRSPFCPMIVR*NLCSMIRSLVR
Trigger: GCGTACCAAGGATCTAATCATTGAGCAAAGATTTCATCGCACAATCATTGGGCAGAAGGGTGAACGGATCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000452931.1
ENST00000476807.5
ENST00000487169.5
ENST00000498595.5
CDS TCA 72 bp GCAGTTGGCTCGCTTGCCTGTGATGATAATGGTCTCTaGATTGCTATTCTCTGCTGGAAGGTCGATTTTGGT +
Preference number: 6 (lower is better)
Translates to: AVGSLACDDNGL*IAILCWKVDFG
Trigger: ACCAAAATCGACCTTCCAGCAGAGAATAGCAATTCAGAGACCATTATCATCACAGGCAAGCGAGCCAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000452931.1
ENST00000460826.1
ENST00000487169.5
ENST00000488923.1
CDS TCA 72 bp ACTCTCTTGGGTCAAAACTGCAACGGAACTCATGGTTaGTCTCACACCTACACACAATCCGGGAAAACCACT +
Preference number: 6 (lower is better)
Translates to: TLLGQNCNGTHG*SHTYTQSGKTT
Trigger: AGTGGTTTTCCCGGATTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413241.5
ENST00000426343.5
ENST00000427183.6
CDS TCA 72 bp ATTTGTGGTATTCTGGCTTGGCGCGGATGTCAACAGTaGAACTCTTGGTTTGCTGCAGAAACCAATCCCACT +
Preference number: 6 (lower is better)
Translates to: ICGILAWRGCQQ*NSWFAAETNPT
Trigger: AGTGGGATTGGTTTCTGCAGCAAACCAAGAGTTTCACTGTTGACATCCGCGCCAAGCCAGAATACCACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427487.5
CDS CCA 72 bp TGGATTCTGGAACCTTTGGGGCCCATGACAGATCGATaGAATTTCTGGGGTATAGCACATTCTAATGTCACC +
Preference number: 6 (lower is better)
Translates to: WILEPLGPMTDR*NFWGIAHSNVT
Trigger: GGTGACATTAGAATGTGCTATACCCCAGAAATTCCATCGATCTGTCATGGGCCCCAAAGGTTCCAGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000427487.5
ENST00000479169.5
ENST00000483086.1
ENST00000487169.5
CDS CCA 72 bp TTAAATCTCACTGTACTTGATTCATTTCCTCATGCCTaGCCAGTCGCCCCTTTGATTTGTTGCGGAACCAGC +
Preference number: 6 (lower is better)
Translates to: LNLTVLDSFPHA*PVAPLICCGTS
Trigger: GCTGGTTCCGCAACAAATCAAAGGGGCGACTGGCCAGGCATGAGGAAATGAATCAAGTACAGTGAGATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449864.5
CDS CCA 72 bp AAAGGAGACACACTTCATGCTCGGAGGCAGTTACCTTaGCATAGACTTCAGTCAACGCCTGACCTAACTTTT +
Preference number: 6 (lower is better)
Translates to: KGDTLHARRQLP*HRLQSTPDLTF
Trigger: AAAAGTTAGGTCAGGCGTTGACTGAAGTCTATGCCAAGGTAACTGCCTCCGAGCATGAAGTGTGTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467435.1
ENST00000470710.1
CDS CCA 72 bp GCTAATGGGGGACCCACCTGCGTTCTCCTCTCTGTCTaGGAATTTAATTTGAACACTGAAATCCCGAGTAAT +
Preference number: 6 (lower is better)
Translates to: ANGGPTCVLLSV*EFNLNTEIPSN
Trigger: ATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGGTGGGTCCCCCATTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479169.5
CDS CAA 72 bp AACTCTCTTGGGTCAAAACTGCAACGGAACTCATGGTaGATCTCACACCTACACACAATCCGGGAAAACCAC +
Preference number: 6 (lower is better)
Translates to: NSLGSKLQRNSW*ISHLHTIRENH
Trigger: GTGGTTTTCCCGGATTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000413241.5
ENST00000417540.5
ENST00000422080.5
ENST00000422933.5
ENST00000423693.5
ENST00000425989.5
ENST00000426343.5
ENST00000427007.5
ENST00000427183.6
ENST00000428482.5
ENST00000430918.5
ENST00000441124.5
ENST00000442714.5
ENST00000444092.5
ENST00000449504.5
ENST00000449864.5
ENST00000452065.5
ENST00000458564.5
CDS CAA 72 bp GAAACTCCAGTTCTCTCAAGGATCTCCTGCAATGAATaGCCCTTGGGCCCAATGACATACTTGTGTTGGGAT +
Preference number: 6 (lower is better)
Translates to: ETPVLSRISCNE*PLGPMTYLCWD
Trigger: ATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTGAGAGAACTGGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000467435.1
ENST00000470710.1
CDS CAA 72 bp ATTTGGGTAATTACTGCCCCCTTTCTCCCGATAATCTaGGGATGGTATTTGGGGTCTACAGTGACACTCAGC +
Preference number: 6 (lower is better)
Translates to: IWVITAPFLPII*GWYLGSTVTLS
Trigger: GCTGAGTGTCACTGTAGACCCCAAATACCATCCCAAGATTATCGGGAGAAAGGGGGCAGTAATTACCCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000470482.5
ENST00000487169.5
CDS CAA 72 bp CCATCACTTGCCACAGGATATATCTGCGTTGACTGCTaGTCTCTCCACGGCAACGTGAGAACTATTTTTGTG +
Preference number: 6 (lower is better)
Translates to: PSLATGYICVDC*SLHGNVRTIFV
Trigger: CACAAAAATAGTTCTCACGTTGCCGTGGAGAGACAAGCAGTCAACGCAGATATATCCTGTGGCAAGTGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479894.1
CDS CAA 90 bp ATCTCAACGGAAACTCCAGTTCTCTCAAGGATCTCCTGCAATGAATaGCCCTTGGGCCCAATGACATACTTGTGTTGGGATTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: ISTETPVLSRISCNE*PLGPMTYLCWDFFT
Trigger: AGTGAAGAAATCCCAACACAAGTATGTCATTGGGCCCAAGGGCAATTCATTGCAGGAGATCCTTGAGAGAACTGGAGTTTCCGTTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000470710.1
CDS CAA 90 bp CCTTCTACCCCTAAGGGTAGCATGAACACGACAGAGCACTGGTATTaGCAAACAAACCTTCAGAGGTTTGTCATGAGGGTAAGTGAGATA +
Preference number: 6 (lower is better)
Translates to: PSTPKGSMNTTEHWY*QTNLQRFVMRVSEI
Trigger: TATCTCACTTACCCTCATGACAAACCTCTGAAGGTTTGTTTGCAAATACCAGTGCTCTGTCGTGTTCATGCTACCCTTAGGGGTAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488923.1
CDS TCA 72 bp ACTCTCTTGGGTCAAAACTGCAACGGAACTCATGGTTaGTCTCACACCTACACACAATCCGGGAAAACCAAA +
Preference number: 6 (lower is better)
Translates to: TLLGQNCNGTHG*SHTYTQSGKTK
Trigger: TTTGGTTTTCCCGGATTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420451.5
CDS TCA 72 bp CAGGAGGGATGCGCACGGACACCTTGTACTGGTCTTTaGTTCTGTTTACTTAGGAACACAAAAGGAAACACA +
Preference number: 6 (lower is better)
Translates to: QEGCARTPCTGL*FCLLRNTKGNT
Trigger: TGTGTTTCCTTTTGTGTTCCTAAGTAAACAGAATCAAAGACCAGTACAAGGTGTCCGTGCGCATCCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487169.5
CDS CCA 72 bp AAGGGTCTCGCCTTTCCAGCAGAGGATGTGGACTGGTaGTATTTCTGGATTCTAATCTTGGTCATGAGTTTT +
Preference number: 6 (lower is better)
Translates to: KGLAFPAEDVDW*YFWILILVMSF
Trigger: AAAACTCATGACCAAGATTAGAATCCAGAAATACCACCAGTCCACATCCTCTGCTGGAAAGGCGAGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462130.1
CDS CCA 72 bp TTAAAGGGTCTCGCCTTTCCAGCAGAGGATGTGGACTaGTGGTATTTCTGGATTCTAATCTTGGTCATGAGT +
Preference number: 6 (lower is better)
Translates to: LKGLAFPAEDVD*WYFWILILVMS
Trigger: ACTCATGACCAAGATTAGAATCCAGAAATACCACCAGTCCACATCCTCTGCTGGAAAGGCGAGACCCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462130.1
CDS CAA 72 bp AACTCTCTTGGGTCAAAACTGCAACGGAACTCATGGTaGATCTCACACCTACACACAATCCGGGAAAACCAA +
Preference number: 6 (lower is better)
Translates to: NSLGSKLQRNSW*ISHLHTIRENQ
Trigger: TTGGTTTTCCCGGATTGTGTGTAGGTGTGAGATCAACCATGAGTTCCGTTGCAGTTTTGACCCAAGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420451.5
CDS CAA 90 bp TGCAGTTTCTCTCCATTTTTGCCAATAACAAAGCGATGGTGTTCTTaGGGAATGGCAACAGTTGCTGAGGCCTTCTCCAAACTGGTTCAT +
Preference number: 6 (lower is better)
Translates to: CSFSPFLPITKRWCS*GMATVAEAFSKLVH
Trigger: ATGAACCAGTTTGGAGAAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTTGTTATTGGCAAAAATGGAGAGAAACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442714.5
CDS CAA 72 bp TCTCCATTTTTGCCAATAACAAAGCGATGGTGTTCTTaGGGAATGGCAACAGTTGCTGAGGCCTTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: SPFLPITKRWCS*GMATVAEAFSK
Trigger: TTTGGAGAAGGCCTCAGCAACTGTTGCCATTCCCAAAGAACACCATCGCTTTGTTATTGGCAAAAATGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442714.5
CDS CCA 72 bp TGGCTCTGTACTGTGAACTGCGTTCTCCTCTCTGTCTaGGAATTTAATTTGAACACTGAAATCCCGAGTAAT +
Preference number: 6 (lower is better)
Translates to: WLCTVNCVLLSV*EFNLNTEIPSN
Trigger: ATTACTCGGGATTTCAGTGTTCAAATTAAATTCCCAGACAGAGAGGAGAACGCAGTTCACAGTACAGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000483086.1
ENST00000487169.5
CDS CCA 72 bp TTGCAAATTACAGTCAATCGATGCAAGTCTACTTTTTaGCTAAGAGAGAGTTCATGTCCCATGCCAGGATCA +
Preference number: 6 (lower is better)
Translates to: LQITVNRCKSTF*LRESSCPMPGS
Trigger: TGATCCTGGCATGGGACATGAACTCTCTCTTAGCCAAAAAGTAGACTTGCATCGATTGACTGTAATTTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488923.1
CDS CAA 72 bp ACCAGTTCTCTGCATGATCTCAAGGCAGATTTTTGCTaGTTCACCTTCTCCAAACTGGTTCATATCCTTGTA +
Preference number: 6 (lower is better)
Translates to: TSSLHDLKADFC*FTFSKLVHILV
Trigger: TACAAGGATATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGCCTTGAGATCATGCAGAGAACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000422933.5
ENST00000427183.6
ENST00000428482.5
ENST00000430918.5
ENST00000441124.5
ENST00000444092.5
ENST00000452065.5
CDS CAA 90 bp ATGATAATGGTCTCTGAATTGCTATTCTCTGCTGGAAGGTCGATTTaGGTGTTGCTTTCTTCACGAATCTTTTTAATGTTTGCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: MIMVSELLFSAGRSI*VLLSSRIFLMFAPP
Trigger: AGGAGGCGCAAACATTAAAAAGATTCGTGAAGAAAGCAACACCAAAATCGACCTTCCAGCAGAGAATAGCAATTCAGAGACCATTATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000310931.10
ENST00000373292.8
ENST00000391975.5
ENST00000391976.6
ENST00000427183.6
ENST00000452931.1
ENST00000460826.1
ENST00000487169.5
ENST00000488923.1
CDS GCA 72 bp AATGACATACTTGTGTTGGGATTTCTTCACTTCCACTaGAATGGTTGTAGTCTTCTTTTTCTTCTCCTCATA +
Preference number: 6 (lower is better)
Translates to: NDILVLGFLHFH*NGCSLLFLLLI
Trigger: TATGAGGAGAAGAAAAAGAAGACTACAACCATTGCAGTGGAAGTGAAGAAATCCCAACACAAGTATGTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310931.10
ENST00000391975.5
ENST00000391976.6
ENST00000470710.1
CDS GCA 72 bp TTCAGAATAGTTGAAGGATTCCAGGTGTTTCTAATGTaGAGTAAGTTTGGGAACTACTATTCTCAAGTTAAA +
Preference number: 6 (lower is better)
Translates to: FRIVEGFQVFLM*SKFGNYYSQVK
Trigger: TTTAACTTGAGAATAGTAGTTCCCAAACTTACTGCACATTAGAAACACCTGGAATCCTTCAACTATTCTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476807.5
ENST00000487169.5