RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HDHD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000069998

Ensembl transcript IDs: ENST00000155674.9, ENST00000336737.8, ENST00000399852.3, ENST00000463033.1, ENST00000477157.5, ENST00000480451.1, ENST00000486462.1

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTaGCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCG +
Preference number: 1 (lower is better)
Translates to: RTLRHTGEENGLRLD*HERHVGTGPRKFQP
Trigger: CGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR GCA 90 bp ACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTaGACAGACATCCACAGTATTCCACACTGCCTCCCCCATTTCAGA +
Preference number: 1 (lower is better)
Translates to: TLCRQAACLQCRQRL*TDIHSIPHCLPHFR
Trigger: TCTGAAATGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR GCA 90 bp GCATCTGGTGTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTaGCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGC +
Preference number: 1 (lower is better)
Translates to: ASGVKTLCRQAACLQ*RQRLCTDIHSIPHC
Trigger: GCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACCAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR CCA 90 bp AGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTaGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGC +
Preference number: 1 (lower is better)
Translates to: REWPEVRLPRKARGN*AQKIPTVPYKMLPS
Trigger: GCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACCAGAGCCCAGCCAATaGGACTCGCCCACAGGTCCA +
Preference number: 2 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRPEPSQ*DSPTGP
Trigger: TGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp GAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCCCAGAGCCCAGCCAATaGGACTCGCCCACAGGTCCA +
Preference number: 2 (lower is better)
Translates to: EENGLRLDCHERHVGTGPPEPSQ*DSPTGP
Trigger: TGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG...GGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR TCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGAAAGGGAACCAAGCCCTaGCCTGAGCCCAGTGATCAG +
Preference number: 2 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRKGTKP*PEPSDQ
Trigger: CTGATCACTGGGCTCAGGTCAGGGCTTGGTTCCCTT...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp GGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGGGGCAGCAAGAAGGGTaGCAAGGGAACCAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GEENGLRLDCHERHVGTGGQQEG*QGNQAL
Trigger: CAGGGCTTGGTTCCCTTGCCACCCTTCTTGCTGCCC...CCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCGGGCAGCAAGAAGGGTaGCAAGGGAACCAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCGQQEG*QGNQAL
Trigger: CAGGGCTTGGTTCCCTTGCCACCCTTCTTGCTGCCC...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp GAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCGGGCAGCAAGAAGGGTaGCAAGGGAACCAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: EENGLRLDCHERHVGTGPGQQEG*QGNQAL
Trigger: CAGGGCTTGGTTCCCTTGCCACCCTTCTTGCTGCCC...GGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR GCA 90 bp GTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCAGGCCTGAGGTTAGACTaGCACGAAAGGCACGTGGGA +
Preference number: 2 (lower is better)
Translates to: VPAKALHRHPQYSTLPPPGLRLD*HERHVG
Trigger: TCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCC...TGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp CACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACAGCCACGAAAGGCACGTaGGAACTGGGCCCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: HSADRLHAFSAGKGSAQTATKGT*ELGPEN
Trigger: ATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC...TGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR TCA 90 bp GGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCAAGGGAACCAAGCCCTaGCCTGAGCCCAGTGATCAG +
Preference number: 2 (lower is better)
Translates to: GCMPSVPAKALHRHPQYSKGTKP*PEPSDQ
Trigger: CTGATCACTGGGCTCAGGTCAGGGCTTGGTTCCCTT...GGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCGCCACGAAAGGCACGTaGGAACTGGGCCCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCATKGT*ELGPEN
Trigger: ATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACACAGGGGAAGAGAATaGCCTGAGGTTAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRHRGRE*PEVRLP
Trigger: TGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTG...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR CCA 90 bp GTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCACACAGGGGAAGAGAATaGCCTGAGGTTAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: VPAKALHRHPQYSTLPPPHRGRE*PEVRLP
Trigger: TGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTG...TGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR GCA 90 bp GCATCTGGTGTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAACCGTTCCATACAAAATaGTACCCAGCAGGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: ASGVKTLCRQAACLQCRQPFHTK*YPAGKK
Trigger: CTTTTTCCCTGCTGGGTAGCATTTTGTATGGAACGG...TTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACCAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR TCA 90 bp CAACCGTTCCATACAAAATGCTACCCAGCAGGGAAAAAGAGTCACTGTCTTCTTAAGGGAACCAAGCCCTaGCCTGAGCCCAGTGATCAG +
Preference number: 2 (lower is better)
Translates to: QPFHTKCYPAGKKSHCLLKGTKP*PEPSDQ
Trigger: CTGATCACTGGGCTCAGGTCAGGGCTTGGTTCCCTT...AAGAAGACAGTGACTCTTTTTCCCTGCTGGGTAGCATTTTGTATGGAACGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR TCA 90 bp CACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAACTGTCTTCTTCCAAGTaGCCAGTAATGCCACACTCA +
Preference number: 2 (lower is better)
Translates to: HERHVGTGPRKFQPFHTKLSSSK*PVMPHS
Trigger: TGAGTGTGGCATTACTGGTCACTTGGAAGAAGACAG...TTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR-3UTR TCA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGCTGTCTTCTTCCAAGTaGCCAGTAATGCCACACTCA +
Preference number: 2 (lower is better)
Translates to: WELGPENSNRSIQNATQQLSSSK*PVMPHS
Trigger: TGAGTGTGGCATTACTGGTCACTTGGAAGAAGACAG...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR GCA 72 bp CGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTaGACAGACATCCACAGTATTCCACACTGCCTCCCC +
Preference number: 3 (lower is better)
Translates to: RQAACLQCRQRL*TDIHSIPHCLP
Trigger: GGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR GCA 72 bp AGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTaGCACGAAAGGCACGTGGGAACTGGGCCCAGAAAA +
Preference number: 3 (lower is better)
Translates to: RHTGEENGLRLD*HERHVGTGPRK
Trigger: TTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR GCA 72 bp GCATCTGGTGTTAAGACACTCTGCCGACAGGCTGCATaGCTTCAGTGCCGGCAAAGGCTCTGCACAGACATC +
Preference number: 3 (lower is better)
Translates to: ASGVKTLCRQAA*LQCRQRLCTDI
Trigger: GATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACCAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR GCA 72 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTaGCGGCAAAGGCTCTGCACAGACATCCACAGTATT +
Preference number: 3 (lower is better)
Translates to: VKTLCRQAACLQ*RQRLCTDIHSI
Trigger: AATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
3UTR CCA 72 bp CCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTaGGCCCAGAAAATTCCAACCGTTCCATACAAAATG +
Preference number: 3 (lower is better)
Translates to: PEVRLPRKARGN*AQKIPTVPYKM
Trigger: CATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCGCTGAGGGCTGTTGCTaGCGTGTGCCCCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLAEGCC*RVPPAP
Trigger: AGGGGCCGGGGGCACACGGCAGCAACAGCCCTCAGC...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GATCAGGCCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCACAGGAACCCAAAGGTaGGTGGGCTCTGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: DQARAQPMGLAHRSRLTPTGTQR*VGSERG
Trigger: GCCCCGCTCAGAGCCCACCCACCTTTGGGTTCCTGT...GGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGGCCTGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336737.8
CDS-3UTR GCA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCTCACCTCCACCGCACTaGCCTCACTCCAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLSPPPH*PHSKAQ
Trigger: CTGGGCTTTGGAGTGAGGGCAGTGCGGTGGAGGTGA...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GATCAGGCCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTGCCGACAGGCTGCATaGCTTCAGTGCCGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: DQARAQPMGLAHRSRLTPCRQAA*LQCRQR
Trigger: CCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCA...GGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGGCCTGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCGGGCAGCAAGAAGGGTaGCAAGGGAACCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLGQQEG*QGNQAL
Trigger: CAGGGCTTGGTTCCCTTGCCACCCTTCTTGCTGCCC...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCAAGGGAACCAAGCCCTaGCCTGAGCCCAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLKGTKP*PEPSDQ
Trigger: CTGATCACTGGGCTCAGGTCAGGGCTTGGTTCCCTT...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACTTGCTGAGGGCTGTTaGTGCCGTGTGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPLAEGC*CRVPPA
Trigger: GGCCGGGGGCACACGGCAGCAACAGCCCTCAGCAAG...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCATAGAGCTTCCGGATaGGGGCGGCCCAGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GEENGLRLDCHERHVGTGHRASG*GRPSPA
Trigger: GGCGGGGCTGGGCCGCCCCCATCCGGAAGCTCTATG...CCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCCAAGGACAGGCTCCGTaGACTGTGGGTTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLQGQAP*TVGSWD
Trigger: ATCCCAGGAACCCACAGTCCACGGAGCCTGTCCTTG...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp GATCAGGCCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCAAGGTGGGTGGGCTCTaGGAGAAGCTGGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: DQARAQPMGLAHRSRLTPKVGGL*EKLGRK
Trigger: CTTTCTTCCCAGCTTCTCTCAGAGCCCACCCACCTT...GGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGGCCTGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000155674.9
CDS-3UTR TCA 90 bp GATCAGGCCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCCGGCATACTGGTAAGTaGGGATGCTGGGTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: DQARAQPMGLAHRSRLTPRHTGK*GCWVCP
Trigger: TGGGCAAACCCAGCATCCTCACTTACCAGTATGCCG...GGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGGCCTGATC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp GGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCGCTGAGGGCTGTTGCTaGCGTGTGCCCCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GCMPSVPAKALHRHPQYSAEGCC*RVPPAP
Trigger: AGGGGCCGGGGGCACACGGCAGCAACAGCCCTCAGC...GGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GATCAGGCCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCAAGCATAAGTCTCGGTaGCCGTGGAATGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: DQARAQPMGLAHRSRLTPKHKSR*PWNGGS
Trigger: GGAGCCTCCATTCCACGGGCACCGAGACTTATGCTT...GGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGGCCTGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACATCCTCGGGAGGGGCGTaGTCTTTAGCCGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ADRLHAFSAGKGSAQTSTSSGGA*SLAAAP
Trigger: TGGAGCGGCGGCTAAAGACCACGCCCCTCCCGAGGA...TGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCGCCACGAAAGGCACGTaGGAACTGGGCCCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLATKGT*ELGPEN
Trigger: ATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAGAACCCAAAGGTGGGTaGGCTCTGAGCGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPEPKGG*ALSGAH
Trigger: GTGGGCCCCGCTCAGAGCCCACCCACCTTTGGGTTC...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336737.8
CDS-3UTR GCA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAGCTGAGGGCTGTTGCTaGCGTGTGCCCCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RTLRHTGEENGLRLDCHEAEGCC*RVPPAP
Trigger: AGGGGCCGGGGGCACACGGCAGCAACAGCCCTCAGC...TTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAACCACAGCATAGCACCTaGGGGCGGGGCGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RTLRHTGEENGLRLDCHEPQHST*GRGGPG
Trigger: TCCAGGGCCGCCCCGCCCGCAGGTGCTATGCTGTGG...TTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACCATAGAGCTTCCGGATaGGGGCGGCCCAGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LPRKARGNWAQKIPTVPYHRASG*GRPSPA
Trigger: GGCGGGGCTGGGCCGCCCCCATCCGGAAGCTCTATG...GTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCACTGGTGGAACAGGTTaGCGCCGTATACGTCAGACA +
Preference number: 4 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLTGGTG*RRIRQT
Trigger: TGTCTGACGTATACGGCGCCAACCTGTTCCACCAGT...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCAGCTTCATGGGGCTGTaGGAGAGGATAACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLSFMGL*ERITWS
Trigger: AGACCAAGTTATCCTCTCTCACAGCCCCATGAAGCT...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR TCA 90 bp GGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGGCAGCTCTGGCTTGCTaGGGGCTGTTGCTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GEENGLRLDCHERHVGTGAALAC*GLLLPC
Trigger: ACACGGCAGCAACAGCCCTCAGCAAGCCAGAGCTGC...CCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAACTCTGCCGACAGGCTaGATGCCTTCAGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ADRLHAFSAGKGSAQTSTTLPTG*MPSVPA
Trigger: TGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGT...TGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACAACTCTGCCGACAGGCTaGATGCCTTCAGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: HSADRLHAFSAGKGSAQTTLPTG*MPSVPA
Trigger: TGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGT...TGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGAACTCTGCCGACAGGCTaGATGCCTTCAGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRTLPTG*MPSVPA
Trigger: TGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGT...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp AGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGTCGGTGCCCGTGGAATaGAGGCTCCCCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: REWPEVRLPRKARGNWAQSVPVE*RLPSSK
Trigger: CTTGGAGGAGGGGAGCCTCCATTCCACGGGCACCGA...CTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp GGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCGCAGCTCTGGCTTGCTaGGGGCTGTTGCTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GLRLDCHERHVGTGPRKFAALAC*GLLLPC
Trigger: ACACGGCAGCAACAGCCCTCAGCAAGCCAGAGCTGC...GAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGATCTGGCGCCCCATCATaGGTTGCCTTCTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRSGAPS*VAFCRY
Trigger: GTACCTGCAGAAGGCAACGCATGATGGGGCGCCAGA...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCTCACCTCCACCGCACTaGCCTCACTCCAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCSPPPH*PHSKAQ
Trigger: CTGGGCTTTGGAGTGAGGGCAGTGCGGTGGAGGTGA...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp ACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACGCTGCATGCCTTCAGTaGCGGCAAAGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: TLCRQAACLQCRQRLCTDAACLQ*RQRLCT
Trigger: TGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGC...GTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAAGTCTCGGTGCCCGTaGAATGGAGGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EENGLRLDCHERHVGTGPKSRCP*NGGSPP
Trigger: AGGAGGGGAGCCTCCATTCCACGGGCACCGAGACTT...GGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCAAGTCTCGGTGCCCGTaGAATGGAGGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCKSRCP*NGGSPP
Trigger: AGGAGGGGAGCCTCCATTCCACGGGCACCGAGACTT...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGAACGTCATTCACCACGTaGGAGGCCTCCATGAGCCCT +
Preference number: 4 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRTSFTT*EASMSP
Trigger: AGGGCTCATGGAGGCCTCCCACGTGGTGAATGACGT...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCATTCCAGAGCCCAGCCAATaGGACTCGCCCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AGKGSAQTSTVFHTASPIPEPSQ*DSPTGP
Trigger: TGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG...AATGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCCCAGAGCCCAGCCAATaGGACTCGCCCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GCMPSVPAKALHRHPQYSPEPSQ*DSPTGP
Trigger: TGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG...GGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp GCATCTGGTGTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAATCTCCGCCTGTCGCCTaGTCAGGTCCTCGGCATACT +
Preference number: 4 (lower is better)
Translates to: ASGVKTLCRQAACLQCRQSPPVA*SGPRHT
Trigger: AGTATGCCGAGGACCTGATCAGGCGACAGGCGGAGA...TTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACCAGATGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR TCA 90 bp CTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACGCAGCTCTGGCTTGCTaGGGGCTGTTGCTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LPRKARGNWAQKIPTVPYAALAC*GLLLPC
Trigger: ACACGGCAGCAACAGCCCTCAGCAAGCCAGAGCTGC...GTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp GATCAGGCCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTTCAGAAGTCCCTACTaGAATGAGAAGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: DQARAQPMGLAHRSRLTPFRSPY*NEKDTE
Trigger: CTCAGTGTCCTTCTCATTTCAGTAGGGACTTCTGAA...GGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGGCCTGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAGAGGATAACTTGGTCTaGATCCACCTCGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPEDNLV*IHLAPQ
Trigger: CTGGGGTGCGAGGTGGATGCAGACCAAGTTATCCTC...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAGGCACAGCAGAAAGGTaGCATGTCCAAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPGTAER*HVQTWA
Trigger: TGCCCAGGTTTGGACATGGCACCTTTCTGCTGTGCC...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAACTTGCTGAGGGCTGTTaGTGCCGTGTGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKLAEGC*CRVPPA
Trigger: GGCCGGGGGCACACGGCAGCAACAGCCCTCAGCAAG...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACAACACCAGGATGGAGATaGAGCTCTGGCTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HSADRLHAFSAGKGSAQTTPGWR*SSGLLR
Trigger: CCTCAGCAAGCCAGAGCTGCATCTCCATCCTGGTGT...TGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGAACACCAGGATGGAGATaGAGCTCTGGCTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRTPGWR*SSGLLR
Trigger: CCTCAGCAAGCCAGAGCTGCATCTCCATCCTGGTGT...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACAAAGCATAAGTCTCGGTaGCCGTGGAATGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HSADRLHAFSAGKGSAQTKHKSR*PWNGGS
Trigger: GGAGCCTCCATTCCACGGGCACCGAGACTTATGCTT...TGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGCCACAGCATAGCACCTaGGGGCGGGGCGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: WELGPENSNRSIQNATQQPQHST*GRGGPG
Trigger: TCCAGGGCCGCCCCGCCCGCAGGTGCTATGCTGTGG...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCGCAGGGATCACTCTGTaGCCCCGCACAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GLRLDCHERHVGTGPRKFAGITL*PRTSTP
Trigger: TGGAGTGCTTGTGCGGGGCCACAGAGTGATCCCTGC...GAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp GCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCATTCGGAAGCCCAGTCCCTaGGCATTTTCCATCACGGGC +
Preference number: 4 (lower is better)
Translates to: AGKGSAQTSTVFHTASPIRKPSP*AFSITG
Trigger: GCCCGTGATGGAAAATGCCCAGGGACTGGGCTTCCG...AATGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAATCCTCGGGAGGGGCGTaGTCTTTAGCCGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ATKGTWELGPENSNRSIQSSGGA*SLAAAP
Trigger: TGGAGCGGCGGCTAAAGACCACGCCCCTCCCGAGGA...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp GCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCATTGGAGATCCATGTTGCTaGCTAGGACGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AGKGSAQTSTVFHTASPIGDPCC*LGRGGG
Trigger: CCCACCTCCCCGTCCTAGCCAGCAACATGGATCTCC...AATGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAATGGAGATGCAGCTCTaGCTTGCTGAGGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPMEMQL*LAEGCC
Trigger: GCAACAGCCCTCAGCAAGCCAGAGCTGCATCTCCAT...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCACAAGGACAGGCTCCGTaGACTGTGGGTTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VPAKALHRHPQYSTLPPPQGQAP*TVGSWD
Trigger: ATCCCAGGAACCCACAGTCCACGGAGCCTGTCCTTG...TGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp AGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGACGTCATTCACCACGTaGGAGGCCTCCATGAGCCCT +
Preference number: 4 (lower is better)
Translates to: REWPEVRLPRKARGNWAQTSFTT*EASMSP
Trigger: AGGGCTCATGGAGGCCTCCCACGTGGTGAATGACGT...CTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAGCCACGAAAGGCACGTaGGAACTGGGCCCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPATKGT*ELGPEN
Trigger: ATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGACAGGAGATCCATGTTaGTGGCTAGGACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GEENGLRLDCHERHVGTGTGDPC*WLGRGG
Trigger: ACCTCCCCGTCCTAGCCAGCAACATGGATCTCCTGT...CCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGATTGCGGAAGACCAGCTaGACAGCCTCATTCACGTCA +
Preference number: 4 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRLRKTS*TASFTS
Trigger: TGACGTGAATGAGGCTGTGCAGCTGGTCTTCCGCAA...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp ACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACTTGCGGAAGACCAGCTaGACAGCCTCATTCACGTCA +
Preference number: 4 (lower is better)
Translates to: TLCRQAACLQCRQRLCTDLRKTS*TASFTS
Trigger: TGACGTGAATGAGGCTGTGCAGCTGGTCTTCCGCAA...GTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GCATCTGGTGTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAGGCCTGAGGTTAGACTaGCACGAAAGGCACGTGGGA +
Preference number: 4 (lower is better)
Translates to: ASGVKTLCRQAACLQCRQGLRLD*HERHVG
Trigger: TCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCC...TTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACCAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACAGGTGTTAAGACACTCTaGCGACAGGCTGCATGCCTT +
Preference number: 4 (lower is better)
Translates to: HSADRLHAFSAGKGSAQTGVKTL*RQAACL
Trigger: AAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACC...TGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAGGTGTTAAGACACTCTaGCGACAGGCTGCATGCCTT +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPGVKTL*RQAACL
Trigger: AAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACC...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCGAACCCAAAGGTGGGTaGGCTCTGAGAGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GCMPSVPAKALHRHPQYSEPKGG*ALREAG
Trigger: CCCAGCTTCTCTCAGAGCCCACCCACCTTTGGGTTC...GGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000155674.9
CDS-3UTR CCA 90 bp CACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACAAGGGCTGACAGCTCCTaGGCTTTGCTGTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: HSADRLHAFSAGKGSAQTRADSS*ALLCCK
Trigger: CTTACAACACAGCAAAGCCCAGGAGCTGTCAGCCCT...TGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAAGGGCTGACAGCTCCTaGGCTTTGCTGTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPRADSS*ALLCCK
Trigger: CTTACAACACAGCAAAGCCCAGGAGCTGTCAGCCCT...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAACGGAAGCCCAGTCCCTaGGCATTTTCCATCACGGGC +
Preference number: 4 (lower is better)
Translates to: RTLRHTGEENGLRLDCHERKPSP*AFSITG
Trigger: GCCCGTGATGGAAAATGCCCAGGGACTGGGCTTCCG...TTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp GCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACATGCCATGTCCAAACCTaGGCATCTTGGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ADRLHAFSAGKGSAQTSTCHVQT*ASWLQP
Trigger: TGGCTGAAGCCAAGATGCCCAGGTTTGGACATGGCA...TGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAACTGGTGGAACAGGTTaGCGCCGTATACGTCAGACA +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPTGGTG*RRIRQT
Trigger: TGTCTGACGTATACGGCGCCAACCTGTTCCACCAGT...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp TTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCGCCTTCTGCAGGTACTaGTGGAACAGGTTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: FSAGKGSAQTSTVFHTASAFCRY*WNRLAP
Trigger: CGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGC...GGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACGCCTTCTGCAGGTACTaGTGGAACAGGTTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LHAFSAGKGSAQTSTVFHAFCRY*WNRLAP
Trigger: CGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGC...GTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCAAGGCTCCGTGGACTGTaGGTTCCTGGGATTGTAGAC +
Preference number: 4 (lower is better)
Translates to: VPAKALHRHPQYSTLPPPRLRGL*VPGIVD
Trigger: GTCTACAATCCCAGGAACCCACAGTCCACGGAGCCT...TGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAATCGGTGCCCGTGGAATaGAGGCTCCCCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ATKGTWELGPENSNRSIQSVPVE*RLPSSK
Trigger: CTTGGAGGAGGGGAGCCTCCATTCCACGGGCACCGA...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAAGTCTCGGTGCCCGTaGAATGGAGGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RTLRHTGEENGLRLDCHEKSRCP*NGGSPP
Trigger: AGGAGGGGAGCCTCCATTCCACGGGCACCGAGACTT...TTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACGTCATTCACCACGTaGGAGGCCTCCATGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GCMPSVPAKALHRHPQYSTSFTT*EASMSP
Trigger: AGGGCTCATGGAGGCCTCCCACGTGGTGAATGACGT...GGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp TTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCGGGCAGCAAGAAGGGTaGCAAGGGAACCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FSAGKGSAQTSTVFHTASGQQEG*QGNQAL
Trigger: CAGGGCTTGGTTCCCTTGCCACCCTTCTTGCTGCCC...GGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp TTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCGCAGCTCATCCACGGTaGCGACATTTCGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSAGKGSAQTSTVFHTASAAHPR*RHFGSP
Trigger: TGGGCTTCCGAAATGTCGTCACCGTGGATGAGCTGC...GGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR TCA 90 bp GCATCTGGTGTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAACGGCATACTGGTAAGTaGGGATGCTGGGTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ASGVKTLCRQAACLQCRQRHTGK*GCWVCP
Trigger: TGGGCAAACCCAGCATCCTCACTTACCAGTATGCCG...TTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACCAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAATCTGGCGCCCCATCATaGGTTGCCTTCTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RTLRHTGEENGLRLDCHESGAPS*VAFCRY
Trigger: GTACCTGCAGAAGGCAACGCATGATGGGGCGCCAGA...TTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp ACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGGGAAACTTGCTGAGGGCTGTTaGTGCCGTGTGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: TGPRKFQPFHTKCYPAGKLAEGC*CRVPPA
Trigger: GGCCGGGGGCACACGGCAGCAACAGCCCTCAGCAAG...TTTCCCTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp TGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACATCACCTCCACCGCACTaGCCTCACTCCAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CHERHVGTGPRKFQPFHTSPPPH*PHSKAQ
Trigger: CTGGGCTTTGGAGTGAGGGCAGTGCGGTGGAGGTGA...TGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACGCTGCATGCCTTCAGTaGCGGCAAAGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LHAFSAGKGSAQTSTVFHAACLQ*RQRLCT
Trigger: TGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGC...GTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp TGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACATGCCGACAGGCTGCATaGCTTCAGTGCCGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CHERHVGTGPRKFQPFHTCRQAA*LQCRQR
Trigger: CCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCA...TGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp AGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGGGTGTTAAGACACTCTaGCGACAGGCTGCATGCCTT +
Preference number: 4 (lower is better)
Translates to: REWPEVRLPRKARGNWAQGVKTL*RQAACL
Trigger: AAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACC...CTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAGGAGATCCATGTTGCTaGCTAGGACGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATKGTWELGPENSNRSIQGDPCC*LGRGGG
Trigger: CCCACCTCCCCGTCCTAGCCAGCAACATGGATCTCC...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCAAACCTGGGCATCTTaGCTTCAGCCATCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GEENGLRLDCHERHVGTGQTWAS*LQPSTG
Trigger: TCCTGTGGATGGCTGAAGCCAAGATGCCCAGGTTTG...CCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp GTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCAACTGGTGGAACAGGTTaGCGCCGTATACGTCAGACA +
Preference number: 4 (lower is better)
Translates to: VPAKALHRHPQYSTLPPPTGGTG*RRIRQT
Trigger: TGTCTGACGTATACGGCGCCAACCTGTTCCACCAGT...TGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGTTCTGCAGGTACTGGTaGAACAGGTTGGCGCCGTAT +
Preference number: 4 (lower is better)
Translates to: GEENGLRLDCHERHVGTGFCRYW*NRLAPY
Trigger: ATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAA...CCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAGCCTTCTGCAGGTACTaGTGGAACAGGTTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: ATKGTWELGPENSNRSIQAFCRY*WNRLAP
Trigger: CGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGC...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCATTATGGAGATGCAGCTCTaGCTTGCTGAGGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: AGKGSAQTSTVFHTASPIMEMQL*LAEGCC
Trigger: GCAACAGCCCTCAGCAAGCCAGAGCTGCATCTCCAT...AATGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCAGGCTCCGTGGACTGTaGGTTCCTGGGATTGTAGAC +
Preference number: 4 (lower is better)
Translates to: GLRLDCHERHVGTGPRKFRLRGL*VPGIVD
Trigger: GTCTACAATCCCAGGAACCCACAGTCCACGGAGCCT...GAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCAAAGGCACGTGGGAACTaGGCCCAGAAAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: VPAKALHRHPQYSTLPPPKARGN*AQKIPT
Trigger: GGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTT...TGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp AGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAGGCACGTGGGAACTaGGCCCAGAAAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: REWPEVRLPRKARGNWAQKARGN*AQKIPT
Trigger: GGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTT...CTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAATCTCCGCCTGTCGCCTaGTCAGGTCCTCGGCATACT +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKSPPVA*SGPRHT
Trigger: AGTATGCCGAGGACCTGATCAGGCGACAGGCGGAGA...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR TCA 90 bp TGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAGGGAACCAAGCCCTaGCCTGAGCCCAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: CHERHVGTGPRKFQPFHTKGTKP*PEPSDQ
Trigger: CTGATCACTGGGCTCAGGTCAGGGCTTGGTTCCCTT...TGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp ACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACCTGTCTTCTTCCAAGTaGCCAGTAATGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: TLCRQAACLQCRQRLCTDLSSSK*PVMPHS
Trigger: TGAGTGTGGCATTACTGGTCACTTGGAAGAAGACAG...GTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACTGTCTTCTTCCAAGTaGCCAGTAATGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPLSSSK*PVMPHS
Trigger: TGAGTGTGGCATTACTGGTCACTTGGAAGAAGACAG...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGAACAGCTCCTGGGCTTTaGTGTGTTGTAAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRTAPGL*CVVRCS
Trigger: GGAACATCTTACAACACAGCAAAGCCCAGGAGCTGT...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAATCTGGCGCCCCATCATaGGTTGCCTTCTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: ATKGTWELGPENSNRSIQSGAPS*VAFCRY
Trigger: GTACCTGCAGAAGGCAACGCATGATGGGGCGCCAGA...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp TTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCAAGCATAAGTCTCGGTaGCCGTGGAATGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FSAGKGSAQTSTVFHTASKHKSR*PWNGGS
Trigger: GGAGCCTCCATTCCACGGGCACCGAGACTTATGCTT...GGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCTTGCGGAAGACCAGCTaGACAGCCTCATTCACGTCA +
Preference number: 4 (lower is better)
Translates to: GCMPSVPAKALHRHPQYSLRKTS*TASFTS
Trigger: TGACGTGAATGAGGCTGTGCAGCTGGTCTTCCGCAA...GGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp TGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAGGCCTGAGGTTAGACTaGCACGAAAGGCACGTGGGA +
Preference number: 4 (lower is better)
Translates to: CHERHVGTGPRKFQPFHTGLRLD*HERHVG
Trigger: TCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCC...TGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCTGCCGGCAAAGGCTCTaGACAGACATCCACAGTATT +
Preference number: 4 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCCRQRL*TDIHSI
Trigger: AATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCA...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAATGCCGACAGGCTGCATaGCTTCAGTGCCGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKCRQAA*LQCRQR
Trigger: CCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCA...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCAGCATCCGCTTCTCATaGTACTCGGAGAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCSIRFS*YSEKSF
Trigger: GAAGCTCTTCTCCGAGTACCATGAGAAGCGGATGCT...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp AGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAGCATCCGCTTCTCATaGTACTCGGAGAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: REWPEVRLPRKARGNWAQSIRFS*YSEKSF
Trigger: GAAGCTCTTCTCCGAGTACCATGAGAAGCGGATGCT...CTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp GGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCTGCCATGTCCAAACCTaGGCATCTTGGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GCMPSVPAKALHRHPQYSCHVQT*ASWLQP
Trigger: TGGCTGAAGCCAAGATGCCCAGGTTTGGACATGGCA...GGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp GCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCATTTTCTGCAGGTACTGGTaGAACAGGTTGGCGCCGTAT +
Preference number: 4 (lower is better)
Translates to: AGKGSAQTSTVFHTASPIFCRYW*NRLAPY
Trigger: ATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAA...AATGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCTGGACTGTGGGTTCCTaGGATTGTAGACGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GLRLDCHERHVGTGPRKFWTVGS*DCRRLY
Trigger: GTACAGGCGTCTACAATCCCAGGAACCCACAGTCCA...GAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCATTTGGACTGTGGGTTCCTaGGATTGTAGACGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: AGKGSAQTSTVFHTASPIWTVGS*DCRRLY
Trigger: GTACAGGCGTCTACAATCCCAGGAACCCACAGTCCA...AATGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATCGGTGCCCGTGGAATaGAGGCTCCCCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HERHVGTGPRKFQPFHTKSVPVE*RLPSSK
Trigger: CTTGGAGGAGGGGAGCCTCCATTCCACGGGCACCGA...TTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp ACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACAGAACCAAGCATACATaGTTTAGTCCCCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TLCRQAACLQCRQRLCTDRTKHT*FSPLSS
Trigger: AGAGGAGAGGGGACTAAATCATGTATGCTTGGTTCT...GTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000155674.9
CDS-3UTR GCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAACATCCATGATCAGCTaGAGGCTGGTCTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKTSMIS*RLVSQR
Trigger: CCGCTGGGAGACCAGCCTGCAGCTGATCATGGATGT...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCGTATCTCAGCTCCTTaGCCGTCACTTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: GEENGLRLDCHERHVGTGRISAP*PSLSGK
Trigger: TTTACCAGAAAGTGACGGGCAAGGAGCTGAGATACG...CCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp GACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACCGTTCCATACAAAATaGTACCCAGCAGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: DTLPTGCMPSVPAKALHRPFHTK*YPAGKK
Trigger: CTTTTTCCCTGCTGGGTAGCATTTTGTATGGAACGG...TCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAGGCCTGAGGTTAGACTaGCACGAAAGGCACGTGGGA +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKGLRLD*HERHVG
Trigger: TCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCC...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCCACAGTATTCCACACTaGCTCCCCCATTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCHSIPH*LPHFRS
Trigger: ACTTCTGAAATGGGGGAGGCAGTGTGGAATACTGTG...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGGCAGGGATCACTCTGTaGCCCCGCACAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: WELGPENSNRSIQNATQQAGITL*PRTSTP
Trigger: TGGAGTGCTTGTGCGGGGCCACAGAGTGATCCCTGC...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp CACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAAGGAGATCCATGTTGCTaGCTAGGACGGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HERHVGTGPRKFQPFHTKGDPCC*LGRGGG
Trigger: CCCACCTCCCCGTCCTAGCCAGCAACATGGATCTCC...TTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp TTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCAAACCTGGGCATCTTaGCTTCAGCCATCCACAGGA +
Preference number: 4 (lower is better)
Translates to: FSAGKGSAQTSTVFHTASQTWAS*LQPSTG
Trigger: TCCTGTGGATGGCTGAAGCCAAGATGCCCAGGTTTG...GGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp TGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAGCCACGAAAGGCACGTaGGAACTGGGCCCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: CHERHVGTGPRKFQPFHTATKGT*ELGPEN
Trigger: ATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC...TGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCTATCACTGGGCATCTTaGCTTCAGCCATCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GCMPSVPAKALHRHPQYSYHWAS*LQPSTG
Trigger: TCCTGTGGATGGCTGAAGCCAAGATGCCCAGTGATA...GGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399852.3
CDS-3UTR TCA 90 bp CTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAGCTTCATGGGGCTGTaGGAGAGGATAACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LPRKARGNWAQKIPTVPYSFMGL*ERITWS
Trigger: AGACCAAGTTATCCTCTCTCACAGCCCCATGAAGCT...GTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAGAGGATAACTTGGTCTaGATCCACCTCGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKEDNLV*IHLAPQ
Trigger: CTGGGGTGCGAGGTGGATGCAGACCAAGTTATCCTC...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp CACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAAGCTGCATGCCTTCAGTaGCGGCAAAGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: HERHVGTGPRKFQPFHTKAACLQ*RQRLCT
Trigger: TGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGC...TTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp ACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACTCACTTTCTGGTAAATaGTTTCCAGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TLCRQAACLQCRQRLCTDSLSGK*FPGTAE
Trigger: TTCTGCTGTGCCTGGAAACCATTTACCAGAAAGTGA...GTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGGAGATGCAGCTCTaGCTTGCTGAGGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKMEMQL*LAEGCC
Trigger: GCAACAGCCCTCAGCAAGCCAGAGCTGCATCTCCAT...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAATGGACTGTGGGTTCCTaGGATTGTAGACGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: ATKGTWELGPENSNRSIQWTVGS*DCRRLY
Trigger: GTACAGGCGTCTACAATCCCAGGAACCCACAGTCCA...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp TGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAGGCACGTGGGAACTaGGCCCAGAAAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: CHERHVGTGPRKFQPFHTKARGN*AQKIPT
Trigger: GGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTT...TGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp GCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCATTTTCAGAAGTCCCTACTaGAATGAGAAGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: AGKGSAQTSTVFHTASPIFRSPY*NEKDTE
Trigger: CTCAGTGTCCTTCTCATTTCAGTAGGGACTTCTGAA...AATGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAAACAGGAGATCCATGTTaGTGGCTAGGACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HERHVGTGPRKFQPFHTKTGDPC*WLGRGG
Trigger: ACCTCCCCGTCCTAGCCAGCAACATGGATCTCCTGT...TTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGGGCACAGCAGAAAGGTaGCATGTCCAAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WELGPENSNRSIQNATQQGTAER*HVQTWA
Trigger: TGCCCAGGTTTGGACATGGCACCTTTCTGCTGTGCC...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGACACCAGGATGGAGATaGAGCTCTGGCTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WELGPENSNRSIQNATQQTPGWR*SSGLLR
Trigger: CCTCAGCAAGCCAGAGCTGCATCTCCATCCTGGTGT...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAACACAGTATTCCACACTaGCTCCCCCATTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: RTLRHTGEENGLRLDCHEHSIPH*LPHFRS
Trigger: ACTTCTGAAATGGGGGAGGCAGTGTGGAATACTGTG...TTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAATGCCGGCAAAGGCTCTaGACAGACATCCACAGTATT +
Preference number: 4 (lower is better)
Translates to: ATKGTWELGPENSNRSIQCRQRL*TDIHSI
Trigger: AATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCA...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAAAGGCTCCGTGGACTGTaGGTTCCTGGGATTGTAGAC +
Preference number: 4 (lower is better)
Translates to: HERHVGTGPRKFQPFHTKRLRGL*VPGIVD
Trigger: GTCTACAATCCCAGGAACCCACAGTCCACGGAGCCT...TTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp ACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGGGAAACAAGGACAGGCTCCGTaGACTGTGGGTTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TGPRKFQPFHTKCYPAGKQGQAP*TVGSWD
Trigger: ATCCCAGGAACCCACAGTCCACGGAGCCTGTCCTTG...TTTCCCTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAACACAGGGGAAGAGAATaGCCTGAGGTTAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKHRGRE*PEVRLP
Trigger: TGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTG...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAACCGTTCCATACAAAATaGTACCCAGCAGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RTLRHTGEENGLRLDCHEPFHTK*YPAGKK
Trigger: CTTTTTCCCTGCTGGGTAGCATTTTGTATGGAACGG...TTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGCACAGGGGAAGAGAATaGCCTGAGGTTAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: WELGPENSNRSIQNATQQHRGRE*PEVRLP
Trigger: TGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTG...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAACAGCTCCTGGGCTTTaGTGTGTTGTAAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKTAPGL*CVVRCS
Trigger: GGAACATCTTACAACACAGCAAAGCCCAGGAGCTGT...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR GCA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAACCGTTCCATACAAAATaGTACCCAGCAGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: ATKGTWELGPENSNRSIQPFHTK*YPAGKK
Trigger: CTTTTTCCCTGCTGGGTAGCATTTTGTATGGAACGG...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGTGCCGGCAAAGGCTCTaGACAGACATCCACAGTATT +
Preference number: 4 (lower is better)
Translates to: WELGPENSNRSIQNATQQCRQRL*TDIHSI
Trigger: AATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCA...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CCA 90 bp CTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACTCACTTTCTGGTAAATaGTTTCCAGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LPRKARGNWAQKIPTVPYSLSGK*FPGTAE
Trigger: TTCTGCTGTGCCTGGAAACCATTTACCAGAAAGTGA...GTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CCA 90 bp ACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGGGAAATTCTGCAGGTACTGGTaGAACAGGTTGGCGCCGTAT +
Preference number: 4 (lower is better)
Translates to: TGPRKFQPFHTKCYPAGKFCRYW*NRLAPY
Trigger: ATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAA...TTTCCCTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR TCA 90 bp CCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAATTCAGAAGTCCCTACTaGAATGAGAAGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: PRKARGNWAQKIPTVPYKFRSPY*NEKDTE
Trigger: CTCAGTGTCCTTCTCATTTCAGTAGGGACTTCTGAA...TTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR GCA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGCGTATCTCAGCTCCTTaGCCGTCACTTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: WELGPENSNRSIQNATQQRISAP*PSLSGK
Trigger: TTTACCAGAAAGTGACGGGCAAGGAGCTGAGATACG...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS TCA 90 bp CCCGCGGAGCCTCCAGCGCTCAGTCGAGGTCACAGCGAGCTGAACTaGACCCAAGGCCCGCACCAAACCCACAGGCACTTGGGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PAEPPALSRGHSELN*TQGPHQTHRHLGAE
Trigger: CTCCGCCCCCAAGTGCCTGTGGGTTTGGTGCGGGCCTTGGGTTCAGTTCAGCTCGCTGTGACCTCGACTGAGCGCTGGAGGCTCCGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS TCA 90 bp TCCCGCCCGCGGAGCCTCCAGCGCTCAGTCGAGGTCACAGCGAGCTaGACTGAACCCAAGGCCCGCACCAAACCCACAGGCACTTGGGGG +
Preference number: 5 (lower is better)
Translates to: SRPRSLQRSVEVTAS*TEPKARTKPTGTWG
Trigger: CCCCCAAGTGCCTGTGGGTTTGGTGCGGGCCTTGGGTTCAGTTCAGCTCGCTGTGACCTCGACTGAGCGCTGGAGGCTCCGCGGGCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS GCA 90 bp AGTCAGAGGAAGGCAGGGCGCATCCGCCCTCCAGCAAGAACGCGATaGACTCGGGCGCGACGACGGTCCAGGCAGTTCCCAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SQRKAGRIRPPARTR*TRARRRSRQFPGGW
Trigger: CCAGCCTCCTGGGAACTGCCTGGACCGTCGTCGCGCCCGAGTGCATCGCGTTCTTGCTGGAGGGCGGATGCGCCCTGCCTTCCTCTGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480451.1
CDS GCA 90 bp CCAGCCCCAGGGCTCCCATTGCTGAGGAGGACATCCATGATCAGCTaGAGGCTGGTCTCCCAGCGGACCGGCTCCCCTAGGAGGAGCACC +
Preference number: 5 (lower is better)
Translates to: PAPGLPLLRRTSMIS*RLVSQRTGSPRRST
Trigger: GGTGCTCCTCCTAGGGGAGCCGGTCCGCTGGGAGACCAGCCTGCAGCTGATCATGGATGTCCTCCTCAGCAATGGGAGCCCTGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp CTCAGGATGCCAGCTAGGGCTACCCATCCACAAGCCCTCCACCCATaGTGCACCCAGCTGGGCAGGGGCACAGCTCCCCAACAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LRMPARATHPQALHP*CTQLGRGTAPQQAQ
Trigger: CTGGGCTTGTTGGGGAGCTGTGCCCCTGCCCAGCTGGGTGCACCATGGGTGGAGGGCTTGTGGATGGGTAGCCCTAGCTGGCATCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS-3UTR CAA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCCACAGGAGATCCATGTaGCTGGCTAGGACGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLHRRSM*LARTGR
Trigger: CCTCCCCGTCCTAGCCAGCAACATGGATCTCCTGTG...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CAA 90 bp GATCAGGCCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCGCGCCCCATCATGCGTaGCCTTCTGCAGGTACTGGT +
Preference number: 5 (lower is better)
Translates to: DQARAQPMGLAHRSRLTPAPHHA*PSAGTG
Trigger: ACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGC...GGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGGCCTGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS GCA 90 bp TGGTGGAAATCAGAAGACGCGCAGGGAAAACAGGGACGCGGAAACTaGCGGGAAGCGCAGGGGCTGACAAGCAGCCTGGCCCAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: WWKSEDAQGKQGRGN*REAQGLTSSLAQAV
Trigger: GACGGCCTGGGCCAGGCTGCTTGTCAGCCCCTGCGCTTCCCGGCAGTTTCCGCGTCCCTGTTTTCCCTGCGCGTCTTCTGATTTCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS GCA 90 bp ACGTGGGAGGCCTCCATGAGCCCTGGACTGAAGCATAAGTCTCGGTaGCCGTGGAATGGAGGCTCCCCTCCTCCAAGGACAGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: TWEASMSPGLKHKSR*PWNGGSPPPRTGSV
Trigger: CACGGAGCCTGTCCTTGGAGGAGGGGAGCCTCCATTCCACGGGCACCGAGACTTATGCTTCAGTCCAGGGCTCATGGAGGCCTCCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS-3UTR CAA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCTACTGGTGGAACAGGTaGGCGCCGTATACGTCAGAC +
Preference number: 5 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLYWWNR*APYTSD
Trigger: GTCTGACGTATACGGCGCCAACCTGTTCCACCAGTA...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS GCA 90 bp GTGGGTTCCTGGGATTGTAGACGCCTGTACACACCAGGATGGAGATaGAGCTCTGGCTTGCTGAGGGCTGTTGCTGCCGTGTGCCCCCGG +
Preference number: 5 (lower is better)
Translates to: VGSWDCRRLYTPGWR*SSGLLRAVAAVCPR
Trigger: CCGGGGGCACACGGCAGCAACAGCCCTCAGCAAGCCAGAGCTGCATCTCCATCCTGGTGTGTACAGGCGTCTACAATCCCAGGAACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp GGTGCCCGTGGAATGGAGGCTCCCCTCCTCCAAGGACAGGCTCCGTaGACTGTGGGTTCCTGGGATTGTAGACGCCTGTACACACCAGGA +
Preference number: 5 (lower is better)
Translates to: GARGMEAPLLQGQAP*TVGSWDCRRLYTPG
Trigger: TCCTGGTGTGTACAGGCGTCTACAATCCCAGGAACCCACAGTCCACGGAGCCTGTCCTTGGAGGAGGGGAGCCTCCATTCCACGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp GAGGCCTCCATGAGCCCTGGACTGAAGCATAAGTCTCGGTGCCCGTaGAATGGAGGCTCCCCTCCTCCAAGGACAGGCTCCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: EASMSPGLKHKSRCP*NGGSPPPRTGSVDC
Trigger: ACAGTCCACGGAGCCTGTCCTTGGAGGAGGGGAGCCTCCATTCCACGGGCACCGAGACTTATGCTTCAGTCCAGGGCTCATGGAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS-3UTR CAA 90 bp CCAGAGCCCAGCCAATGGGACTCGCCCACAGGTCCAGGCTCACCCCCTCACCTCTTATCACTGGGCATCTaGGCTTCAGCCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: PEPSQWDSPTGPGSPPHLLSLGI*ASAIHR
Trigger: CCTGTGGATGGCTGAAGCCAAGATGCCCAGTGATAA...GAGGTGAGGGGGTGAGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399852.3
CDS GCA 90 bp CACTGCCCTCACTCCAAAGCCCAGCCCTCCTTGCGGAAGACCAGCTaGACAGCCTCATTCACGTCATTCACCACGTGGGAGGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: HCPHSKAQPSLRKTS*TASFTSFTTWEASM
Trigger: CATGGAGGCCTCCCACGTGGTGAATGACGTGAATGAGGCTGTGCAGCTGGTCTTCCGCAAGGAGGGCTGGGCTTTGGAGTGAGGGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS GCA 90 bp CCTCACCTCCACCGCACTGCCCTCACTCCAAAGCCCAGCCCTCCTTaGGGAAGACCAGCTGCACAGCCTCATTCACGTCATTCACCACGT +
Preference number: 5 (lower is better)
Translates to: PHLHRTALTPKPSPP*GRPAAQPHSRHSPR
Trigger: ACGTGGTGAATGACGTGAATGAGGCTGTGCAGCTGGTCTTCCGCAAGGAGGGCTGGGCTTTGGAGTGAGGGCAGTGCGGTGGAGGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp GGCCCCGCACAAGCACTCCATCGATGTCCAACAGGAACCCAAAGGTaGGTGGGCTCTGGTTTAGTGTCCTGTGCCGTCTCCCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GPAQALHRCPTGTQR*VGSGLVSCAVSQLQ
Trigger: CTGCAGCTGGGAGACGGCACAGGACACTAAACCAGAGCCCACCCACCTTTGGGTTCCTGTTGGACATCGATGGAGTGCTTGTGCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480451.1
CDS-3UTR CAA 90 bp ACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACCACAGGAGATCCATGTaGCTGGCTAGGACGGGGAGG +
Preference number: 5 (lower is better)
Translates to: TLCRQAACLQCRQRLCTDHRRSM*LARTGR
Trigger: CCTCCCCGTCCTAGCCAGCAACATGGATCTCCTGTG...GTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CAA 90 bp CACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACAAAAGCCCAGCCCTCCTaGCGGAAGACCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: HSADRLHAFSAGKGSAQTKAQPS*RKTSCT
Trigger: TGTGCAGCTGGTCTTCCGCAAGGAGGGCTGGGCTTT...TGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS GCA 90 bp AAGCTTCGGCTTCCTGACCACACAAGGTCACACCTTCTCAGAAGTTaGGGGGAGGCTCACACATCACTACCGCGCCGGGCACACAGCAGG +
Preference number: 5 (lower is better)
Translates to: KLRLPDHTRSHLLRS*GEAHTSLPRRAHSR
Trigger: CCTGCTGTGTGCCCGGCGCGGTAGTGATGTGTGAGCCTCCCCGCAACTTCTGAGAAGGTGTGACCTTGTGTGGTCAGGAAGCCGAAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS CCA 90 bp GAGGCTCCCCTCCTCCAAGGACAGGCTCCGTGGACTGTGGGTTCCTaGGATTGTAGACGCCTGTACACACCAGGATGGAGATGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: EAPLLQGQAPWTVGS*DCRRLYTPGWRCSS
Trigger: AGAGCTGCATCTCCATCCTGGTGTGTACAGGCGTCTACAATCCCAGGAACCCACAGTCCACGGAGCCTGTCCTTGGAGGAGGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS-3UTR CAA 90 bp GTGCCGGCAAAGGCTCTGCACAGACATCCACAGTATTCCACACTGCCTCCCCCAAAAGCCCAGCCCTCCTaGCGGAAGACCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: VPAKALHRHPQYSTLPPPKAQPS*RKTSCT
Trigger: TGTGCAGCTGGTCTTCCGCAAGGAGGGCTGGGCTTT...TGGGGGAGGCAGTGTGGAATACTGTGGATGTCTGTGCAGAGCCTTTGCCGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS CCA 90 bp TGGACTGTGGGTTCCTGGGATTGTAGACGCCTGTACACACCAGGATaGAGATGCAGCTCTGGCTTGCTGAGGGCTGTTGCTGCCGTGTGC +
Preference number: 5 (lower is better)
Translates to: WTVGSWDCRRLYTPG*RCSSGLLRAVAAVC
Trigger: GCACACGGCAGCAACAGCCCTCAGCAAGCCAGAGCTGCATCTCCATCCTGGTGTGTACAGGCGTCTACAATCCCAGGAACCCACAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp GTGGAATGGAGGCTCCCCTCCTCCAAGGACAGGCTCCGTGGACTGTaGGTTCCTGGGATTGTAGACGCCTGTACACACCAGGATGGAGAT +
Preference number: 5 (lower is better)
Translates to: VEWRLPSSKDRLRGL*VPGIVDACTHQDGD
Trigger: ATCTCCATCCTGGTGTGTACAGGCGTCTACAATCCCAGGAACCCACAGTCCACGGAGCCTGTCCTTGGAGGAGGGGAGCCTCCATTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS-3UTR CAA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCCCAAACCTGGGCATCTaGGCTTCAGCCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCPNLGI*ASAIHR
Trigger: CCTGTGGATGGCTGAAGCCAAGATGCCCAGGTTTGG...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CAA 90 bp GGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGGTGAGGATGCTGGGTTaGCCCATCAGGCCCTCGTAT +
Preference number: 5 (lower is better)
Translates to: GEENGLRLDCHERHVGTGVRMLG*PIRPSY
Trigger: ATACGAGGGCCTGATGGGCAAACCCAGCATCCTCAC...CCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CAA 90 bp GTTAAGACACTCTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCGTGAGGATGCTGGGTTaGCCCATCAGGCCCTCGTAT +
Preference number: 5 (lower is better)
Translates to: VKTLCRQAACLQCRQRLCVRMLG*PIRPSY
Trigger: ATACGAGGGCCTGATGGGCAAACCCAGCATCCTCAC...GCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CAA 90 bp GCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACATACTGGTGGAACAGGTaGGCGCCGTATACGTCAGAC +
Preference number: 5 (lower is better)
Translates to: ADRLHAFSAGKGSAQTSTYWWNR*APYTSD
Trigger: GTCTGACGTATACGGCGCCAACCTGTTCCACCAGTA...TGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS TCA 90 bp CCACCATGTCAAGCAGAGGAAAGGCCATCCGCAGCTCATCCACGGTaGCGACATTTCGGAAGCCCAGTCCCTGGGCATTTTCCATCACGG +
Preference number: 5 (lower is better)
Translates to: PPCQAEERPSAAHPR*RHFGSPVPGHFPSR
Trigger: CCGTGATGGAAAATGCCCAGGGACTGGGCTTCCGAAATGTCGTCACCGTGGATGAGCTGCGGATGGCCTTTCCTCTGCTTGACATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS CCA 90 bp TTCCCAGCATTTGTAACAAAAACCACGGGCACCCGCAGCTGCCCCTaGGAGTTCACCAGCCTTCGGAAGGCTTTCAGAGCAGCAGGGATC +
Preference number: 5 (lower is better)
Translates to: FPAFVTKTTGTRSCP*EFTSLRKAFRAAGI
Trigger: GATCCCTGCTGCTCTGAAAGCCTTCCGAAGGCTGGTGAACTCCCAGGGGCAGCTGCGGGTGCCCGTGGTTTTTGTTACAAATGCTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000480451.1
CDS CCA 90 bp TTGCGGAAGACCAGCTGCACAGCCTCATTCACGTCATTCACCACGTaGGAGGCCTCCATGAGCCCTGGACTGAAGCATAAGTCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: LRKTSCTASFTSFTT*EASMSPGLKHKSRC
Trigger: GCACCGAGACTTATGCTTCAGTCCAGGGCTCATGGAGGCCTCCCACGTGGTGAATGACGTGAATGAGGCTGTGCAGCTGGTCTTCCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp CTAAGGTACAGGGCCGGTGAACTGCACCAGACCAGTGATTCTCCATaGGGCAGCACCGCCCCTGCTGAGGTGCTTTACAAATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LRYRAGELHQTSDSP*GSTAPAEVLYKSEA
Trigger: TGCCTCTGATTTGTAAAGCACCTCAGCAGGGGCGGTGCTGCCCCATGGAGAATCACTGGTCTGGTGCAGTTCACCGGCCCTGTACCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS-3UTR CAA 90 bp CTGCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCAGTGAGAGAGGATAACTaGGTCTGCATCCACCTCGCA +
Preference number: 5 (lower is better)
Translates to: LPTGCMPSVPAKALHRHPVREDN*VCIHLA
Trigger: TGCGAGGTGGATGCAGACCAAGTTATCCTCTCTCAC...TGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CAA 90 bp GCCGACAGGCTGCATGCCTTCAGTGCCGGCAAAGGCTCTGCACAGACATCCACAGTGAGAGAGGATAACTaGGTCTGCATCCACCTCGCA +
Preference number: 5 (lower is better)
Translates to: ADRLHAFSAGKGSAQTSTVREDN*VCIHLA
Trigger: TGCGAGGTGGATGCAGACCAAGTTATCCTCTCTCAC...TGTGGATGTCTGTGCAGAGCCTTTGCCGGCACTGAAGGCATGCAGCCTGTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CAA 90 bp GAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCTACTGGTGGAACAGGTaGGCGCCGTATACGTCAGAC +
Preference number: 5 (lower is better)
Translates to: EENGLRLDCHERHVGTGPYWWNR*APYTSD
Trigger: GTCTGACGTATACGGCGCCAACCTGTTCCACCAGTA...GGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS TCA 90 bp AGCATCCGCTTCTCATGGTACTCGGAGAAGAGCTTCATGGGGCTGTaGGAGAGGATAACTTGGTCTGCATCCACCTCGCACCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SIRFSWYSEKSFMGL*ERITWSASTSHPSR
Trigger: CCTGCTGGGGTGCGAGGTGGATGCAGACCAAGTTATCCTCTCTCACAGCCCCATGAAGCTCTTCTCCGAGTACCATGAGAAGCGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000480451.1
CDS TCA 90 bp CCCTTGCTGCTGAACCAGGCTGCAGGCAGTCACACTGAGACAGCCTaGGGGCCAGAGAGGAGACGGAGAAAAGACCTCACAACTCATCAA +
Preference number: 5 (lower is better)
Translates to: PLLLNQAAGSHTETA*GPERRRRKDLTTHQ
Trigger: TTGATGAGTTGTGAGGTCTTTTCTCCGTCTCCTCTCTGGCCCTCAGGCTGTCTCAGTGTGACTGCCTGCAGCCTGGTTCAGCAGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS TCA 90 bp CTTCTCCTTGCTGGCTGGGACTCTGCCACCACATTCTCCCTCACATaGCTTAGCAAGGGCTCCTGTTCCCTCAGTCGCTTCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: LLLAGWDSATTFSLT*LSKGSCSLSRFSLS
Trigger: GCTCAGAGAGAAGCGACTGAGGGAACAGGAGCCCTTGCTAAGTCATGTGAGGGAGAATGTGGTGGCAGAGTCCCAGCCAGCAAGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp CCTAGTTCTGGCGCCCCATCATGCGTTGCCTTCTGCAGGTACTGGTaGAACAGGTTGGCGCCGTATACGTCAGACATAGGGTTATCACCC +
Preference number: 5 (lower is better)
Translates to: PSSGAPSCVAFCRYW*NRLAPYTSDIGLSP
Trigger: GGGTGATAACCCTATGTCTGACGTATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGCCAGAACTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp GCCCCTAGTTCTGGCGCCCCATCATGCGTTGCCTTCTGCAGGTACTaGTGGAACAGGTTGGCGCCGTATACGTCAGACATAGGGTTATCA +
Preference number: 5 (lower is better)
Translates to: APSSGAPSCVAFCRY*WNRLAPYTSDIGLS
Trigger: TGATAACCCTATGTCTGACGTATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGCCAGAACTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 90 bp AGCACTCCATCGATGTCCAACAGGAACCCAAAGGTGGGTGGGCTCTaGTTTAGTGTCCTGTGCCGTCTCCCAGCTGCAGGACCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: STPSMSNRNPKVGGL*FSVLCRLPAAGPEK
Trigger: TTTCTCAGGTCCTGCAGCTGGGAGACGGCACAGGACACTAAACCAGAGCCCACCCACCTTTGGGTTCCTGTTGGACATCGATGGAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480451.1
CDS-3UTR CAA 90 bp AGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAACCAAACCTGGGCATCTaGGCTTCAGCCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: RTLRHTGEENGLRLDCHEPNLGI*ASAIHR
Trigger: CCTGTGGATGGCTGAAGCCAAGATGCCCAGGTTTGG...TTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS-3UTR CAA 90 bp GCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAGCGCCCCATCATGCGTaGCCTTCTGCAGGTACTGGT +
Preference number: 5 (lower is better)
Translates to: ATKGTWELGPENSNRSIQAPHHA*PSAGTG
Trigger: ACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGC...TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS GCA 90 bp AAGATGTTCCCAGCATTTGTAACAAAAACCACGGGCACCCGCAGCTaGCCCTGGGAGTTCACCAGCCTTCGGAAGGCTTTCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: KMFPAFVTKTTGTRS*PWEFTSLRKAFRAA
Trigger: TGCTGCTCTGAAAGCCTTCCGAAGGCTGGTGAACTCCCAGGGGCAGCTGCGGGTGCCCGTGGTTTTTGTTACAAATGCTGGGAACATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000480451.1
CDS CCA 90 bp CCTAGTTCTGGCGCCCCATCATGCGTTGCCTTCTGCAGGTACTGGTaGAACAGGTTGGCGCCGTATACGTCAGACATAGGGTTATCACTG +
Preference number: 5 (lower is better)
Translates to: PSSGAPSCVAFCRYW*NRLAPYTSDIGLSL
Trigger: CAGTGATAACCCTATGTCTGACGTATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGCCAGAACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399852.3
CDS CCA 90 bp TCAGGCCCTCGTATCTCAGCTCCTTGCCCGTCACTTTCTGGTAAATaGTTTCCAGGCACAGCAGAAAGGTGCCATGTCCAAACCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SGPRISAPCPSLSGK*FPGTAERCHVQTWA
Trigger: TGCCCAGGTTTGGACATGGCACCTTTCTGCTGTGCCTGGAAACCATTTACCAGAAAGTGACGGGCAAGGAGCTGAGATACGAGGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000477157.5
ENST00000486462.1
CDS-3UTR CAA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGCACAGGAGATCCATGTaGCTGGCTAGGACGGGGAGG +
Preference number: 5 (lower is better)
Translates to: WELGPENSNRSIQNATQQHRRSM*LARTGR
Trigger: CCTCCCCGTCCTAGCCAGCAACATGGATCTCCTGTG...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS-3UTR CAA 90 bp TGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGAAAGCCCAGCCCTCCTaGCGGAAGACCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: WELGPENSNRSIQNATQQKAQPS*RKTSCT
Trigger: TGTGCAGCTGGTCTTCCGCAAGGAGGGCTGGGCTTT...CTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS GCA 90 bp TCCAACAGGAACCCAAAGGTGGGTGGGCTCTGGTTTAGTGTCCTGTaGCGTCTCCCAGCTGCAGGACCTGAGAAAACGTACTTGAAAACT +
Preference number: 5 (lower is better)
Translates to: SNRNPKVGGLWFSVL*RLPAAGPEKTYLKT
Trigger: AGTTTTCAAGTACGTTTTCTCAGGTCCTGCAGCTGGGAGACGGCACAGGACACTAAACCAGAGCCCACCCACCTTTGGGTTCCTGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480451.1
CDS-3UTR CAA 90 bp ACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATGCTACCCAGCAGGGAAAGCGCCCCATCATGCGTaGCCTTCTGCAGGTACTGGT +
Preference number: 5 (lower is better)
Translates to: TGPRKFQPFHTKCYPAGKAPHHA*PSAGTG
Trigger: ACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGC...TTTCCCTGCTGGGTAGCATTTTGTATGGAACGGTTGGAATTTTCTGGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
CDS TCA 90 bp AGCATCCGCTTCTCATGGTACTCGGAGAAGAGCTTCATGGGGCTGTaGGAGAGGATAACTTGGTCTGCATCCACCTGGTTTAGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: SIRFSWYSEKSFMGL*ERITWSASTWFSVL
Trigger: CAGGACACTAAACCAGGTGGATGCAGACCAAGTTATCCTCTCTCACAGCCCCATGAAGCTCTTCTCCGAGTACCATGAGAAGCGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463033.1
CDS TCA 90 bp ACACAAGATATAGCCAAGCAAGAGTCTAAAATCAGGCAGCTAAGGTaGGGCCGTGGAGACGAAGGCGGCATCACGCCTGATGGGCCATTT +
Preference number: 5 (lower is better)
Translates to: TQDIAKQESKIRQLR*GRGDEGGITPDGPF
Trigger: AAATGGCCCATCAGGCGTGATGCCGCCTTCGTCTCCACGGCCTCACCTTAGCTGCCTGATTTTAGACTCTTGCTTGGCTATATCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS CCA 90 bp TTCCTCCACATGCAGATGAAAATCACGACCCAAACGTCCTCATGGTaGAAATCAGAAGACGCGCAGGGAAAACAGGGACGCGGAAACTGC +
Preference number: 5 (lower is better)
Translates to: FLHMQMKITTQTSSW*KSEDAQGKQGRGNC
Trigger: GCAGTTTCCGCGTCCCTGTTTTCCCTGCGCGTCTTCTGATTTCCACCATGAGGACGTTTGGGTCGTGATTTTCATCTGCATGTGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS CCA 90 bp AGTTTCCTCCACATGCAGATGAAAATCACGACCCAAACGTCCTCATaGTGGAAATCAGAAGACGCGCAGGGAAAACAGGGACGCGGAAAC +
Preference number: 5 (lower is better)
Translates to: SFLHMQMKITTQTSS*WKSEDAQGKQGRGN
Trigger: GTTTCCGCGTCCCTGTTTTCCCTGCGCGTCTTCTGATTTCCACCATGAGGACGTTTGGGTCGTGATTTTCATCTGCATGTGGAGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS TCA 90 bp GATAGAGACTTGAAACCCAACCTGGACTCCACCGATTCTCCTGTATaGCTGTGGCCAAGTAACTTCTCTTCTCTAAGCCTCAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: DRDLKPNLDSTDSPV*LWPSNFSSLSLSFL
Trigger: GAGGAAACTGAGGCTTAGAGAAGAGAAGTTACTTGGCCACAGTCATACAGGAGAATCGGTGGAGTCCAGGTTGGGTTTCAAGTCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp CGGGCGCGACGACGGTCCAGGCAGTTCCCAGGAGGCTaGGATACCAGCCCGGCCGCCCCTCCTTCCCCGCGG +
Preference number: 6 (lower is better)
Translates to: RARRRSRQFPGG*DTSPAAPPSPR
Trigger: CCGCGGGGAAGGAGGGGCGGCCGGGCTGGTATCCCAGCCTCCTGGGAACTGCCTGGACCGTCGTCGCGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480451.1
CDS CCA 72 bp ACTGAACCCAAGGCCCGCACCAAACCCACAGGCACTTaGGGGCGGAGCACCCGCAGGCGCGGCTCCCGGCGC +
Preference number: 6 (lower is better)
Translates to: TEPKARTKPTGT*GRSTRRRGSRR
Trigger: GCGCCGGGAGCCGCGCCTGCGGGTGCTCCGCCCCCAAGTGCCTGTGGGTTTGGTGCGGGCCTTGGGTTCAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS GCA 72 bp AAGGCAGGGCGCATCCGCCCTCCAGCAAGAACGCGATaGACTCGGGCGCGACGACGGTCCAGGCAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: KAGRIRPPARTR*TRARRRSRQFP
Trigger: TGGGAACTGCCTGGACCGTCGTCGCGCCCGAGTGCATCGCGTTCTTGCTGGAGGGCGGATGCGCCCTGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480451.1
CDS GCA 72 bp AGGATGGAGATGCAGCTCTGGCTTGCTGAGGGCTGTTaGTGCCGTGTGCCCCCGGCCCCTAGTTCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: RMEMQLWLAEGC*CRVPPAPSSGA
Trigger: GGCGCCAGAACTAGGGGCCGGGGGCACACGGCAGCAACAGCCCTCAGCAAGCCAGAGCTGCATCTCCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS TCA 72 bp CGGAGCCTCCAGCGCTCAGTCGAGGTCACAGCGAGCTaGACTGAACCCAAGGCCCGCACCAAACCCACAGGC +
Preference number: 6 (lower is better)
Translates to: RSLQRSVEVTAS*TEPKARTKPTG
Trigger: GCCTGTGGGTTTGGTGCGGGCCTTGGGTTCAGTTCAGCTCGCTGTGACCTCGACTGAGCGCTGGAGGCTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS GCA 72 bp GGGCTCCCATTGCTGAGGAGGACATCCATGATCAGCTaGAGGCTGGTCTCCCAGCGGACCGGCTCCCCTAGG +
Preference number: 6 (lower is better)
Translates to: GLPLLRRTSMIS*RLVSQRTGSPR
Trigger: CCTAGGGGAGCCGGTCCGCTGGGAGACCAGCCTGCAGCTGATCATGGATGTCCTCCTCAGCAATGGGAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS GCA 72 bp TCAGAAGACGCGCAGGGAAAACAGGGACGCGGAAACTaGCGGGAAGCGCAGGGGCTGACAAGCAGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: SEDAQGKQGRGN*REAQGLTSSLA
Trigger: GGCCAGGCTGCTTGTCAGCCCCTGCGCTTCCCGGCAGTTTCCGCGTCCCTGTTTTCCCTGCGCGTCTTCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS CCA 72 bp CCCATCCACAAGCCCTCCACCCATGGTGCACCCAGCTaGGCAGGGGCACAGCTCCCCAACAAGCCCAGTAGA +
Preference number: 6 (lower is better)
Translates to: PIHKPSTHGAPS*AGAQLPNKPSR
Trigger: TCTACTGGGCTTGTTGGGGAGCTGTGCCCCTGCCCAGCTGGGTGCACCATGGGTGGAGGGCTTGTGGATGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS CAA 90 bp CCCTCACCTCCACCGCACTGCCCTCACTCCAAAGCCCAGCCCTCCTaGCGGAAGACCAGCTGCACAGCCTCATTCACGTCATTCACCACG +
Preference number: 6 (lower is better)
Translates to: PSPPPHCPHSKAQPS*RKTSCTASFTSFTT
Trigger: CGTGGTGAATGACGTGAATGAGGCTGTGCAGCTGGTCTTCCGCAAGGAGGGCTGGGCTTTGGAGTGAGGGCAGTGCGGTGGAGGTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS GCA 72 bp GCCTCCATGAGCCCTGGACTGAAGCATAAGTCTCGGTaGCCGTGGAATGGAGGCTCCCCTCCTCCAAGGACA +
Preference number: 6 (lower is better)
Translates to: ASMSPGLKHKSR*PWNGGSPPPRT
Trigger: TGTCCTTGGAGGAGGGGAGCCTCCATTCCACGGGCACCGAGACTTATGCTTCAGTCCAGGGCTCATGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp AGGCTCCCCTCCTCCAAGGACAGGCTCCGTGGACTGTaGGTTCCTGGGATTGTAGACGCCTGTACACACCAG +
Preference number: 6 (lower is better)
Translates to: RLPSSKDRLRGL*VPGIVDACTHQ
Trigger: CTGGTGTGTACAGGCGTCTACAATCCCAGGAACCCACAGTCCACGGAGCCTGTCCTTGGAGGAGGGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp ATGAGCCCTGGACTGAAGCATAAGTCTCGGTGCCCGTaGAATGGAGGCTCCCCTCCTCCAAGGACAGGCTCC +
Preference number: 6 (lower is better)
Translates to: MSPGLKHKSRCP*NGGSPPPRTGS
Trigger: GGAGCCTGTCCTTGGAGGAGGGGAGCCTCCATTCCACGGGCACCGAGACTTATGCTTCAGTCCAGGGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS GCA 72 bp CACTCCAAAGCCCAGCCCTCCTTGCGGAAGACCAGCTaGACAGCCTCATTCACGTCATTCACCACGTGGGAG +
Preference number: 6 (lower is better)
Translates to: HSKAQPSLRKTS*TASFTSFTTWE
Trigger: CTCCCACGTGGTGAATGACGTGAATGAGGCTGTGCAGCTGGTCTTCCGCAAGGAGGGCTGGGCTTTGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp GGCGCCCCATCATGCGTTGCCTTCTGCAGGTACTGGTaGAACAGGTTGGCGCCGTATACGTCAGACATAGGG +
Preference number: 6 (lower is better)
Translates to: GAPSCVAFCRYW*NRLAPYTSDIG
Trigger: CCCTATGTCTGACGTATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp AGGGCCGGTGAACTGCACCAGACCAGTGATTCTCCATaGGGCAGCACCGCCCCTGCTGAGGTGCTTTACAAA +
Preference number: 6 (lower is better)
Translates to: RAGELHQTSDSP*GSTAPAEVLYK
Trigger: TTTGTAAAGCACCTCAGCAGGGGCGGTGCTGCCCCATGGAGAATCACTGGTCTGGTGCAGTTCACCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS CAA 90 bp TCGACCAGCCTCGAGGGTCCACTCCATCCCCAGGCCATGGTAGTCTaGGCTCTGCCACTAAACAACTATGTGACCCGGGACAGGTCACTC +
Preference number: 6 (lower is better)
Translates to: STSLEGPLHPQAMVV*ALPLNNYVTRDRSL
Trigger: GAGTGACCTGTCCCGGGTCACATAGTTGTTTAGTGGCAGAGCCAAGACTACCATGGCCTGGGGATGGAGTGGACCCTCGAGGCTGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS CAA 90 bp AAGGCGGCATCACGCCTGATGGGCCATTTCTCCTCATGTCGGTTCTaGAGCAGGCAGCTTCACTCGACCAGCCTCGAGGGTCCACTCCAT +
Preference number: 6 (lower is better)
Translates to: KAASRLMGHFSSCRF*SRQLHSTSLEGPLH
Trigger: ATGGAGTGGACCCTCGAGGCTGGTCGAGTGAAGCTGCCTGCTCAAGAACCGACATGAGGAGAAATGGCCCATCAGGCGTGATGCCGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS TCA 72 bp CTGAACCAGGCTGCAGGCAGTCACACTGAGACAGCCTaGGGGCCAGAGAGGAGACGGAGAAAAGACCTCACA +
Preference number: 6 (lower is better)
Translates to: LNQAAGSHTETA*GPERRRRKDLT
Trigger: TGTGAGGTCTTTTCTCCGTCTCCTCTCTGGCCCTCAGGCTGTCTCAGTGTGACTGCCTGCAGCCTGGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS GCA 72 bp TGGGATTGTAGACGCCTGTACACACCAGGATGGAGATaGAGCTCTGGCTTGCTGAGGGCTGTTGCTGCCGTG +
Preference number: 6 (lower is better)
Translates to: WDCRRLYTPGWR*SSGLLRAVAAV
Trigger: CACGGCAGCAACAGCCCTCAGCAAGCCAGAGCTGCATCTCCATCCTGGTGTGTACAGGCGTCTACAATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp CTCCTCCAAGGACAGGCTCCGTGGACTGTGGGTTCCTaGGATTGTAGACGCCTGTACACACCAGGATGGAGA +
Preference number: 6 (lower is better)
Translates to: LLQGQAPWTVGS*DCRRLYTPGWR
Trigger: TCTCCATCCTGGTGTGTACAGGCGTCTACAATCCCAGGAACCCACAGTCCACGGAGCCTGTCCTTGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CAA 72 bp CTCGAGGGTCCACTCCATCCCCAGGCCATGGTAGTCTaGGCTCTGCCACTAAACAACTATGTGACCCGGGAC +
Preference number: 6 (lower is better)
Translates to: LEGPLHPQAMVV*ALPLNNYVTRD
Trigger: GTCCCGGGTCACATAGTTGTTTAGTGGCAGAGCCAAGACTACCATGGCCTGGGGATGGAGTGGACCCTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS CAA 72 bp TCACGCCTGATGGGCCATTTCTCCTCATGTCGGTTCTaGAGCAGGCAGCTTCACTCGACCAGCCTCGAGGGT +
Preference number: 6 (lower is better)
Translates to: SRLMGHFSSCRF*SRQLHSTSLEG
Trigger: ACCCTCGAGGCTGGTCGAGTGAAGCTGCCTGCTCAAGAACCGACATGAGGAGAAATGGCCCATCAGGCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS CAA 90 bp GGCGCCCCATCATGCGTTGCCTTCTGCAGGTACTGGTGGAACAGGTaGGCGCCGTATACGTCAGACATAGGGTTATCACTGGGCATCTTG +
Preference number: 6 (lower is better)
Translates to: GAPSCVAFCRYWWNR*APYTSDIGLSLGIL
Trigger: CAAGATGCCCAGTGATAACCCTATGTCTGACGTATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399852.3
CDS TCA 72 bp CAAGCAGAGGAAAGGCCATCCGCAGCTCATCCACGGTaGCGACATTTCGGAAGCCCAGTCCCTGGGCATTTT +
Preference number: 6 (lower is better)
Translates to: QAEERPSAAHPR*RHFGSPVPGHF
Trigger: AAAATGCCCAGGGACTGGGCTTCCGAAATGTCGTCACCGTGGATGAGCTGCGGATGGCCTTTCCTCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155674.9
ENST00000336737.8
CDS TCA 72 bp CTCCCGGCGCGCGGCCCAGTTTCCTCCACATGCAGATaGAAATCACGACCCAAACGTCCTCATGGTGGAAAT +
Preference number: 6 (lower is better)
Translates to: LPARGPVSSTCR*KSRPKRPHGGN
Trigger: ATTTCCACCATGAGGACGTTTGGGTCGTGATTTTCATCTGCATGTGGAGGAAACTGGGCCGCGCGCCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS GCA 72 bp AACCCAAAGGTGGGTGGGCTCTGGTTTAGTGTCCTGTaGCGTCTCCCAGCTGCAGGACCTGAGAAAACGTAC +
Preference number: 6 (lower is better)
Translates to: NPKVGGLWFSVL*RLPAAGPEKTY
Trigger: GTACGTTTTCTCAGGTCCTGCAGCTGGGAGACGGCACAGGACACTAAACCAGAGCCCACCCACCTTTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480451.1
CDS CCA 72 bp TTTGTAACAAAAACCACGGGCACCCGCAGCTGCCCCTaGGAGTTCACCAGCCTTCGGAAGGCTTTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: FVTKTTGTRSCP*EFTSLRKAFRA
Trigger: TGCTCTGAAAGCCTTCCGAAGGCTGGTGAACTCCCAGGGGCAGCTGCGGGTGCCCGTGGTTTTTGTTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000480451.1
CDS CCA 72 bp TCTGGCGCCCCATCATGCGTTGCCTTCTGCAGGTACTaGTGGAACAGGTTGGCGCCGTATACGTCAGACATA +
Preference number: 6 (lower is better)
Translates to: SGAPSCVAFCRY*WNRLAPYTSDI
Trigger: TATGTCTGACGTATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGCAACGCATGATGGGGCGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp ACCAGCTGCACAGCCTCATTCACGTCATTCACCACGTaGGAGGCCTCCATGAGCCCTGGACTGAAGCATAAG +
Preference number: 6 (lower is better)
Translates to: TSCTASFTSFTT*EASMSPGLKHK
Trigger: CTTATGCTTCAGTCCAGGGCTCATGGAGGCCTCCCACGTGGTGAATGACGTGAATGAGGCTGTGCAGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000399852.3
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp CAAGCACTCCATCGATGTCCAACAGGAACCCAAAGGTaGGTGGGCTCTGGTTTAGTGTCCTGTGCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: QALHRCPTGTQR*VGSGLVSCAVS
Trigger: GGAGACGGCACAGGACACTAAACCAGAGCCCACCCACCTTTGGGTTCCTGTTGGACATCGATGGAGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480451.1
CDS TCA 72 bp GCCGTCTCCCAGCTGCAGGACCTGAGAAAACGTACTTaGAAACTCGTCAAGCTTCGGCTTCCTGACCACACA +
Preference number: 6 (lower is better)
Translates to: AVSQLQDLRKRT*KLVKLRLPDHT
Trigger: TGTGTGGTCAGGAAGCCGAAGCTTGACGAGTTTTCAAGTACGTTTTCTCAGGTCCTGCAGCTGGGAGACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS TCA 72 bp ATAGCCAAGCAAGAGTCTAAAATCAGGCAGCTAAGGTaGGGCCGTGGAGACGAAGGCGGCATCACGCCTGAT +
Preference number: 6 (lower is better)
Translates to: IAKQESKIRQLR*GRGDEGGITPD
Trigger: ATCAGGCGTGATGCCGCCTTCGTCTCCACGGCCTCACCTTAGCTGCCTGATTTTAGACTCTTGCTTGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS CCA 72 bp ACAAAAGCAGCATGTCTCAGGGCTACTTCTCCTTGCTaGCTGGGACTCTGCCACCACATTCTCCCTCACATG +
Preference number: 6 (lower is better)
Translates to: TKAACLRATSPC*LGLCHHILPHM
Trigger: CATGTGAGGGAGAATGTGGTGGCAGAGTCCCAGCCAGCAAGGAGAAGTAGCCCTGAGACATGCTGCTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477157.5
ENST00000486462.1
CDS CAA 72 bp TCATGCGTTGCCTTCTGCAGGTACTGGTGGAACAGGTaGGCGCCGTATACGTCAGACATAGGGTTATCACCC +
Preference number: 6 (lower is better)
Translates to: SCVAFCRYWWNR*APYTSDIGLSP
Trigger: GGGTGATAACCCTATGTCTGACGTATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGCAACGCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000477157.5
ENST00000486462.1
CDS TCA 72 bp TTCTCATGGTACTCGGAGAAGAGCTTCATGGGGCTGTaGGAGAGGATAACTTGGTCTGCATCCACCTCGCAC +
Preference number: 6 (lower is better)
Translates to: FSWYSEKSFMGL*ERITWSASTSH
Trigger: GTGCGAGGTGGATGCAGACCAAGTTATCCTCTCTCACAGCCCCATGAAGCTCTTCTCCGAGTACCATGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000480451.1
CDS GCA 72 bp ATAACTTGGTCTGCATCCACCTGGTTTAGTGTCCTGTaGCGTCTCCCAGCTGCAGGACCTGAGAAAACGTAC +
Preference number: 6 (lower is better)
Translates to: ITWSASTWFSVL*RLPAAGPEKTY
Trigger: GTACGTTTTCTCAGGTCCTGCAGCTGGGAGACGGCACAGGACACTAAACCAGGTGGATGCAGACCAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463033.1
CDS GCA 72 bp AAAACAAAAGCAGCATGTCTCAGGGCTACTTCTCCTTaGTGGCTGGGACTCTGCCACCACATTCTCCCTCAC +
Preference number: 6 (lower is better)
Translates to: KTKAACLRATSP*WLGLCHHILPH
Trigger: GTGAGGGAGAATGTGGTGGCAGAGTCCCAGCCAGCAAGGAGAAGTAGCCCTGAGACATGCTGCTTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp AGTCACCAGGAGGAAGGGTGGTCAGCTGTCTTTCTCTaGTGGGAGAGGACACAAGATATAGCCAAGCAAGAG +
Preference number: 6 (lower is better)
Translates to: SHQEEGWSAVFL*WERTQDIAKQE
Trigger: CTCTTGCTTGGCTATATCTTGTGTCCTCTCCCACCAGAGAAAGACAGCTGACCACCCTTCCTCCTGGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477157.5
CDS CAA 72 bp TCATGCGTTGCCTTCTGCAGGTACTGGTGGAACAGGTaGGCGCCGTATACGTCAGACATAGGGTTATCACTG +
Preference number: 6 (lower is better)
Translates to: SCVAFCRYWWNR*APYTSDIGLSL
Trigger: CAGTGATAACCCTATGTCTGACGTATACGGCGCCAACCTGTTCCACCAGTACCTGCAGAAGGCAACGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399852.3
CDS CAA 72 bp CAAAACAAAAGCAGCATGTCTCAGGGCTACTTCTCCTaGCTGGCTGGGACTCTGCCACCACATTCTCCCTCA +
Preference number: 6 (lower is better)
Translates to: QNKSSMSQGYFS*LAGTLPPHSPS
Trigger: TGAGGGAGAATGTGGTGGCAGAGTCCCAGCCAGCAAGGAGAAGTAGCCCTGAGACATGCTGCTTTTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp CGTATCTCAGCTCCTTGCCCGTCACTTTCTGGTAAATaGTTTCCAGGCACAGCAGAAAGGTGCCATGTCCAA +
Preference number: 6 (lower is better)
Translates to: RISAPCPSLSGK*FPGTAERCHVQ
Trigger: TTGGACATGGCACCTTTCTGCTGTGCCTGGAAACCATTTACCAGAAAGTGACGGGCAAGGAGCTGAGATACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000155674.9
ENST00000336737.8
ENST00000477157.5
ENST00000486462.1
CDS CCA 72 bp ATGCAGATGAAAATCACGACCCAAACGTCCTCATGGTaGAAATCAGAAGACGCGCAGGGAAAACAGGGACGC +
Preference number: 6 (lower is better)
Translates to: MQMKITTQTSSW*KSEDAQGKQGR
Trigger: GCGTCCCTGTTTTCCCTGCGCGTCTTCTGATTTCCACCATGAGGACGTTTGGGTCGTGATTTTCATCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS TCA 72 bp TTCTCATGGTACTCGGAGAAGAGCTTCATGGGGCTGTaGGAGAGGATAACTTGGTCTGCATCCACCTGGTTT +
Preference number: 6 (lower is better)
Translates to: FSWYSEKSFMGL*ERITWSASTWF
Trigger: AAACCAGGTGGATGCAGACCAAGTTATCCTCTCTCACAGCCCCATGAAGCTCTTCTCCGAGTACCATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463033.1
CDS CCA 72 bp CACATGCAGATGAAAATCACGACCCAAACGTCCTCATaGTGGAAATCAGAAGACGCGCAGGGAAAACAGGGA +
Preference number: 6 (lower is better)
Translates to: HMQMKITTQTSS*WKSEDAQGKQG
Trigger: TCCCTGTTTTCCCTGCGCGTCTTCTGATTTCCACCATGAGGACGTTTGGGTCGTGATTTTCATCTGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS CAA 90 bp AAGAGGTTACAAAACAAAAGCAGCATGTCTCAGGGCTACTTCTCCTaGCTGGCTGGGACTCTGCCACCACATTCTCCCTCACATGACTTA +
Preference number: 6 (lower is better)
Translates to: KRLQNKSSMSQGYFS*LAGTLPPHSPSHDL
Trigger: TAAGTCATGTGAGGGAGAATGTGGTGGCAGAGTCCCAGCCAGCAAGGAGAAGTAGCCCTGAGACATGCTGCTTTTGTTTTGTAACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477157.5
ENST00000486462.1
CDS TCA 72 bp AAAACGTACTTGAAAACTCGTCAAGCTTCGGCTTCCTaGCCACACAAGGTCACACCTTCTCAGAAGTTGCGG +
Preference number: 6 (lower is better)
Translates to: KTYLKTRQASAS*PHKVTPSQKLR
Trigger: CCGCAACTTCTGAGAAGGTGTGACCTTGTGTGGTCAGGAAGCCGAAGCTTGACGAGTTTTCAAGTACGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463033.1
ENST00000480451.1
CDS TCA 72 bp TTGAAACCCAACCTGGACTCCACCGATTCTCCTGTATaGCTGTGGCCAAGTAACTTCTCTTCTCTAAGCCTC +
Preference number: 6 (lower is better)
Translates to: LKPNLDSTDSPV*LWPSNFSSLSL
Trigger: GAGGCTTAGAGAAGAGAAGTTACTTGGCCACAGTCATACAGGAGAATCGGTGGAGTCCAGGTTGGGTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477157.5
ENST00000486462.1
CDS CAA 72 bp ATACAACTATCGTGTAAGTCAAGAGAAGACTGTACTTaGCCTTTTCAAAACTCTACCAAGAACTGTTACCTA +
Preference number: 6 (lower is better)
Translates to: IQLSCKSREDCT*PFQNSTKNCYL
Trigger: TAGGTAACAGTTCTTGGTAGAGTTTTGAAAAGGCAAAGTACAGTCTTCTCTTGACTTACACGATAGTTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477157.5