RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HDGFL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000166503

Ensembl transcript IDs: ENST00000299633.7, ENST00000563404.1, ENST00000563790.5, ENST00000568129.1, ENST00000568294.5

Found 653 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTGGACTCCACCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTaGCAGGCCAGGCAGGGCACCCTGCCAACCCCAGCATGCTTTGAC +
Preference number: 1 (lower is better)
Translates to: SGLHPLPGGIPVESY*QARQGTLPTPACFD
Trigger: GTCAAAGCATGCTGGGGTTGGCAGGGTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGGTGGAGTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp CTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCAGGTaGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACCCT +
Preference number: 1 (lower is better)
Translates to: LWLLPLRQWTPPSPR*HPGGELLPGQAGHP
Trigger: AGGGTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 90 bp AGTGTAGGGGTGTTTCAGGACAATCTGGCCCTCGCCTCTGGCTATTaGCTCTCAGGCAGTGGACTCCACCCTCTCCCAGGTGGCATCCCG +
Preference number: 1 (lower is better)
Translates to: SVGVFQDNLALASGY*LSGSGLHPLPGGIP
Trigger: CGGGATGCCACCTGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGATTGTCCTGAAACACCCCTACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp TCAGGACAATCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTaGACTCCACCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTG +
Preference number: 1 (lower is better)
Translates to: SGQSGPRLWLLPLRQ*TPPSPRWHPGGELL
Trigger: CAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGATTGTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 90 bp GCCTCCTCTGCCTGCCATGTGCCTGGTCGGCCTGGTACCAGTCCCTaGTGCAGGAATGCTAAGTGTCATCAGCCAGCAGGCTGGTTAAAG +
Preference number: 1 (lower is better)
Translates to: ASSACHVPGRPGTSP*CRNAKCHQPAGWLK
Trigger: CTTTAACCAGCCTGCTGGCTGATGACACTTAGCATTCCTGCATCAGGGACTGGTACCAGGCCGACCAGGCACATGGCAGGCAGAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp AAGGTCGTGTGGCTGTTGACCCCTAAAGCCCATGCCCTTCCATCATaGATGCTGCCCCAGCCAAGCTGCTACCGGCCTTTGAGCACTTCC +
Preference number: 1 (lower is better)
Translates to: KVVWLLTPKAHALPS*MLPQPSCYRPLSTS
Trigger: GGAAGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAGCATGCATGATGGAAGGGCATGGGCTTTAGGGGTCAACAGCCACACGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 90 bp CTCAGTTACTGGCTTTGCTCCCACTGCCCATGTGGGATGTGGGTTTaGTTCTGGGCAGCCACTTGTAGGGGAGTGGAGGATGGGTGGAGT +
Preference number: 1 (lower is better)
Translates to: LSYWLCSHCPCGMWV*FWAATCRGVEDGWS
Trigger: ACTCCACCCATCCTCCACTCCCCTACAAGTGGCTGCCCAGAATCAAACCCACATCCCACATGGGCAGTGGGAGCAAAGCCAGTAACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 90 bp CTCTCTCCACTAGCCTGTGCTCTGACCCTTGCACACCTTTCCAGATaGGTTTCCTGCTGCTGTCTGTCCCTCCTGTTCCTCCCCACTCCA +
Preference number: 1 (lower is better)
Translates to: LSPLACALTLAHLSR*VSCCCLSLLFLPTP
Trigger: TGGAGTGGGGAGGAACAGGAGGGACAGACAGCAGCAGGAAACTCATCTGGAAAGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 90 bp CAATTGTGCTTTGCCTGCACAATCAGGCCTCCTCTGCCTGCCATGTaGCTGGTCGGCCTGGTACCAGTCCCTGATGCAGGAATGCTAAGT +
Preference number: 1 (lower is better)
Translates to: QLCFACTIRPPLPAM*LVGLVPVPDAGMLS
Trigger: ACTTAGCATTCCTGCATCAGGGACTGGTACCAGGCCGACCAGGCACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp ATTACCTGTGTCAATTGTGCTTTGCCTGCACAATCAGGCCTCCTCTaGCTGCCATGTGCCTGGTCGGCCTGGTACCAGTCCCTGATGCAG +
Preference number: 1 (lower is better)
Translates to: ITCVNCALPAQSGLL*LPCAWSAWYQSLMQ
Trigger: CTGCATCAGGGACTGGTACCAGGCCGACCAGGCACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGACACAGGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTaGCCTCATCCTGTTCCTGGTAGCACTGCTGGCTCGTGTCCTCGT +
Preference number: 1 (lower is better)
Translates to: SLFWSLQFLDYCRGC*PHPVPGSTAGSCPR
Trigger: ACGAGGACACGAGCCAGCAGTGCTACCAGGAACAGGATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 90 bp ACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTaGTGCCCTCATCCTGTTCCTGGTAGCACTGCTGGCTCGTGTCCT +
Preference number: 1 (lower is better)
Translates to: TSLFWSLQFLDYCRG*CPHPVPGSTAGSCP
Trigger: AGGACACGAGCCAGCAGTGCTACCAGGAACAGGATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp CAGCCGCAGGGGCATTACCTCATTCATGTCAGACGTCAGGCATCCTaGGGCTTATCCATCACTGCCCAGTTGATAAGGCAGCCTGAAGCC +
Preference number: 1 (lower is better)
Translates to: QPQGHYLIHVRRQAS*GLSITAQLIRQPEA
Trigger: GGCTTCAGGCTGCCTTATCAACTGGGCAGTGATGGATAAGCCCCAGGATGCCTGACGTCTGACATGAATGAGGTAATGCCCCTGCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp AGGTGCTGGAGAACCTTGTGGGTGGAAGGCAGTGACATTCCGAGTTaGACTCTGAGGGCCAAGTGGGGCTTTATTAGGCTGAGCCTCTCC +
Preference number: 1 (lower is better)
Translates to: RCWRTLWVEGSDIPS*TLRAKWGFIRLSLS
Trigger: GGAGAGGCTCAGCCTAATAAAGCCCCACTTGGCCCTCAGAGTCCAACTCGGAATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 90 bp GGCATCCTGGGGCTTATCCATCACTGCCCAGTTGATAAGGCAGCCTaGAGCCCCTCTCTTGATGGTGAATGCCCAGATCCAGAGCCTAAG +
Preference number: 1 (lower is better)
Translates to: GILGLIHHCPVDKAA*SPSLDGECPDPEPK
Trigger: CTTAGGCTCTGGATCTGGGCATTCACCATCAAGAGAGGGGCTTCAGGCTGCCTTATCAACTGGGCAGTGATGGATAAGCCCCAGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 90 bp TTTCAAGGTCCAGGCCTGGCACCAGGTCAACTGAGGGGAGGCTGGTaGCTGTGGTCTTCCTGCCTGCCTCAGAATAAACAGCACAATGGA +
Preference number: 1 (lower is better)
Translates to: FQGPGLAPGQLRGGW*LWSSCLPQNKQHNG
Trigger: TCCATTGTGCTGTTTATTCTGAGGCAGGCAGGAAGACCACAGTCACCAGCCTCCCCTCAGTTGACCTGGTGCCAGGCCTGGACCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 90 bp CTTTCTCCTGTACCCTCAGCCCTCTGTCCTGGTCTGTTACAACTTTaGGTACACTGCAGCCTCAGGGTGAGGCTCAAGGCCAGACTCCTC +
Preference number: 1 (lower is better)
Translates to: LSPVPSALCPGLLQL*VHCSLRVRLKARLL
Trigger: GAGGAGTCTGGCCTTGAGCCTCACCCTGAGGCTGCAGTGTACTCAAAGTTGTAACAGACCAGGACAGAGGGCTGAGGGTACAGGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 90 bp GGCATCTACCCAGGGGAGTTGTATCTGAGGGCCGAGTCCTCTCAGTaGCTCATGGATCACAATGTAGACAATCCACGTGCTGGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: GIYPGELYLRAESSQ*LMDHNVDNPRAGPW
Trigger: CCAAGGACCAGCACGTGGATTGTCTACATTGTGATCCATGAGGCACTGAGAGGACTCGGCCCTCAGATACAACTCCCCTGGGTAGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp TTCAAGGCTGGGCACCCTTTCTCCTGTACCCTCAGCCCTCTGTCCTaGTCTGTTACAACTTTGAGTACACTGCAGCCTCAGGGTGAGGCT +
Preference number: 1 (lower is better)
Translates to: FKAGHPFSCTLSPLS*SVTTLSTLQPQGEA
Trigger: AGCCTCACCCTGAGGCTGCAGTGTACTCAAAGTTGTAACAGACCAGGACAGAGGGCTGAGGGTACAGGAGAAAGGGTGCCCAGCCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp GGCACAGTGGGGCTAGAAGGAAGAAAGTGGTGGCTCTTAAGGCCTTaGCTTGGAGCTGCCCCATCTTACTCCCACCCATATTCCAATGGC +
Preference number: 1 (lower is better)
Translates to: GTVGLEGRKWWLLRP*LGAAPSYSHPYSNG
Trigger: GCCATTGGAATATGGGTGGGAGTAAGATGGGGCAGCTCCAAGCCAAGGCCTTAAGAGCCACCACTTTCTTCCTTCTAGCCCCACTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp CATGGCAGATACAGAGGCACAGTGGGGCTAGAAGGAAGAAAGTGGTaGCTCTTAAGGCCTTGGCTTGGAGCTGCCCCATCTTACTCCCAC +
Preference number: 1 (lower is better)
Translates to: HGRYRGTVGLEGRKW*LLRPWLGAAPSYSH
Trigger: GTGGGAGTAAGATGGGGCAGCTCCAAGCCAAGGCCTTAAGAGCCACCACTTTCTTCCTTCTAGCCCCACTGTGCCTCTGTATCTGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 90 bp ATCATGTGGGATATTTTCAAGGTCCAGGCCTGGCACCAGGTCAACTaGGGGGAGGCTGGTGACTGTGGTCTTCCTGCCTGCCTCAGAATA +
Preference number: 1 (lower is better)
Translates to: IMWDIFKVQAWHQVN*GEAGDCGLPACLRI
Trigger: TATTCTGAGGCAGGCAGGAAGACCACAGTCACCAGCCTCCCCTCAGTTGACCTGGTGCCAGGCCTGGACCTTGAAAATATCCCACATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp GCTGTTCAGTTTGACACCTATTACCTGTGTCAATTGTGCTTTGCCTaGACAATCAGGCCTCCTCTGCCTGCCATGTGCCTGGTCGGCCTG +
Preference number: 1 (lower is better)
Translates to: AVQFDTYYLCQLCFA*TIRPPLPAMCLVGL
Trigger: CAGGCCGACCAGGCACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGACACAGGTAATAGGTGTCAAACTGAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp ACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTaGACACCTTTCCAGATGAGTTTCCTGCTGCTGTCTGTCCCTCCT +
Preference number: 1 (lower is better)
Translates to: TCLFLALSTSLCSDP*TPFQMSFLLLSVPP
Trigger: AGGAGGGACAGACAGCAGCAGGAAACTCATCTGGAAAGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp CATGTGGGATGTGGGTTTGATTCTGGGCAGCCACTTGTAGGGGAGTaGAGGATGGGTGGAGTTGGCCTGCTAGAATCTTCTGTGACTGAG +
Preference number: 1 (lower is better)
Translates to: HVGCGFDSGQPLVGE*RMGGVGLLESSVTE
Trigger: CTCAGTCACAGAAGATTCTAGCAGGCCAACTCCACCCATCCTCCACTCCCCTACAAGTGGCTGCCCAGAATCAAACCCACATCCCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp TCTCATGGCAGATACAGAGGCACAGTGGGGCTAGAAGGAAGAAAGTaGTGGCTCTTAAGGCCTTGGCTTGGAGCTGCCCCATCTTACTCC +
Preference number: 1 (lower is better)
Translates to: SHGRYRGTVGLEGRK*WLLRPWLGAAPSYS
Trigger: GGAGTAAGATGGGGCAGCTCCAAGCCAAGGCCTTAAGAGCCACCACTTTCTTCCTTCTAGCCCCACTGTGCCTCTGTATCTGCCATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 90 bp TCTGTCCTGGTCTGTTACAACTTTGAGTACACTGCAGCCTCAGGGTaGGGCTCAAGGCCAGACTCCTCACGTACTAGAAGGCAGAGACCA +
Preference number: 1 (lower is better)
Translates to: SVLVCYNFEYTAASG*GSRPDSSRTRRQRP
Trigger: TGGTCTCTGCCTTCTAGTACGTGAGGAGTCTGGCCTTGAGCCTCACCCTGAGGCTGCAGTGTACTCAAAGTTGTAACAGACCAGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 90 bp ATTTTGTCCTCAGAGCCCAGAGATGCATATACATTTGCTGGGTTCTaGCTGGGCATCTACCCAGGGGAGTTGTATCTGAGGGCCGAGTCC +
Preference number: 1 (lower is better)
Translates to: ILSSEPRDAYTFAGF*LGIYPGELYLRAES
Trigger: GGACTCGGCCCTCAGATACAACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGTATATGCATCTCTGGGCTCTGAGGACAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp AGTGGGGCTAGAAGGAAGAAAGTGGTGGCTCTTAAGGCCTTGGCTTaGAGCTGCCCCATCTTACTCCCACCCATATTCCAATGGCTGAGA +
Preference number: 1 (lower is better)
Translates to: SGARRKKVVALKALA*SCPILLPPIFQWLR
Trigger: TCTCAGCCATTGGAATATGGGTGGGAGTAAGATGGGGCAGCTCCAAGCCAAGGCCTTAAGAGCCACCACTTTCTTCCTTCTAGCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp GAAGCAGCTGGCTTGGAGATGCTAAGAAATGTGGCAAAGGTCGTGTaGCTGTTGACCCCTAAAGCCCATGCCCTTCCATCATGCATGCTG +
Preference number: 1 (lower is better)
Translates to: EAAGLEMLRNVAKVV*LLTPKAHALPSCML
Trigger: CAGCATGCATGATGGAAGGGCATGGGCTTTAGGGGTCAACAGCCACACGACCTTTGCCACATTTCTTAGCATCTCCAAGCCAGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 90 bp TCAGAGTTCCTAGAATGTCCAGAAAGCACCTCCTCAGGGCAGCCCTaGAAGTGCCCTTTACTCTCAAGGCATTTTGTCCTCAGAGCCCAG +
Preference number: 1 (lower is better)
Translates to: SEFLECPESTSSGQP*KCPLLSRHFVLRAQ
Trigger: CTGGGCTCTGAGGACAAAATGCCTTGAGAGTAAAGGGCACTTTCAGGGCTGCCCTGAGGAGGTGCTTTCTGGACATTCTAGGAACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp TCAAGGCATTTTGTCCTCAGAGCCCAGAGATGCATATACATTTGCTaGGTTCTGCCTGGGCATCTACCCAGGGGAGTTGTATCTGAGGGC +
Preference number: 1 (lower is better)
Translates to: SRHFVLRAQRCIYIC*VLPGHLPRGVVSEG
Trigger: GCCCTCAGATACAACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGTATATGCATCTCTGGGCTCTGAGGACAAAATGCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp ACAGCACAAAAGACTGTATGTAGTACGAGGTGCTGGAGAACCTTGTaGGTGGAAGGCAGTGACATTCCGAGTTGGACTCTGAGGGCCAAG +
Preference number: 1 (lower is better)
Translates to: TAQKTVCSTRCWRTL*VEGSDIPSWTLRAK
Trigger: CTTGGCCCTCAGAGTCCAACTCGGAATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCTCGTACTACATACAGTCTTTTGTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 90 bp AAGCATGTCACAAACATCACCTCACTGAACCCTCATAACAACCTATaGGGTGGGTTCCACACCTCACCCGAGGCCATACGGCTGGTTTGT +
Preference number: 1 (lower is better)
Translates to: KHVTNITSLNPHNNL*GGFHTSPEAIRLVC
Trigger: ACAAACCAGCCGTATGGCCTCGGGTGAGGTGTGGAACCCACCTCATAGGTTGTTATGAGGGTTCAGTGAGGTGATGTTTGTGACATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp CTCTCAAGGCATTTTGTCCTCAGAGCCCAGAGATGCATATACATTTaGTGGGTTCTGCCTGGGCATCTACCCAGGGGAGTTGTATCTGAG +
Preference number: 1 (lower is better)
Translates to: LSRHFVLRAQRCIYI*WVLPGHLPRGVVSE
Trigger: CTCAGATACAACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGTATATGCATCTCTGGGCTCTGAGGACAAAATGCCTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp AAGTGCCCTTTACTCTCAAGGCATTTTGTCCTCAGAGCCCAGAGATaGATATACATTTGCTGGGTTCTGCCTGGGCATCTACCCAGGGGA +
Preference number: 1 (lower is better)
Translates to: KCPLLSRHFVLRAQR*IYICWVLPGHLPRG
Trigger: TCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGTATATGCATCTCTGGGCTCTGAGGACAAAATGCCTTGAGAGTAAAGGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp ATGGCACAGAGTCCTACAGCACAAAAGACTGTATGTAGTACGAGGTaGTGGAGAACCTTGTGGGTGGAAGGCAGTGACATTCCGAGTTGG +
Preference number: 1 (lower is better)
Translates to: MAQSPTAQKTVCSTR*WRTLWVEGSDIPSW
Trigger: CCAACTCGGAATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCTCGTACTACATACAGTCTTTTGTGCTGTAGGACTCTGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp TGGCCTGGTTCCTCTGCCTTATTCTCCTGTATCCTTCAGAACAGATaGCCGCATACCCACTTCACTCTTGCCAGCCCTTTCTTTAGAGGA +
Preference number: 1 (lower is better)
Translates to: WPGSSALFSCILQNR*PHTHFTLASPFFRG
Trigger: TCCTCTAAAGAAAGGGCTGGCAAGAGTGAAGTGGGTATGCGGCCATCTGTTCTGAAGGATACAGGAGAATAAGGCAGAGGAACCAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp GCACAGAGTCCTACAGCACAAAAGACTGTATGTAGTACGAGGTGCTaGAGAACCTTGTGGGTGGAAGGCAGTGACATTCCGAGTTGGACT +
Preference number: 1 (lower is better)
Translates to: AQSPTAQKTVCSTRC*RTLWVEGSDIPSWT
Trigger: AGTCCAACTCGGAATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCTCGTACTACATACAGTCTTTTGTGCTGTAGGACTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp AGTTTGACAGCTGTTCAGTTTGACACCTATTACCTGTGTCAATTGTaGTTTGCCTGCACAATCAGGCCTCCTCTGCCTGCCATGTGCCTG +
Preference number: 1 (lower is better)
Translates to: SLTAVQFDTYYLCQL*FACTIRPPLPAMCL
Trigger: CAGGCACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGACACAGGTAATAGGTGTCAAACTGAACAGCTGTCAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp AATTCATCTTCTGTCCTTCTCCCCCAGGTCCTAGCTCGCTCACTCTaGGCCTCATTTGCCTTCTTGCTTTTCCTTGATTATGCTGAGCTC +
Preference number: 1 (lower is better)
Translates to: NSSSVLLPQVLARSL*ASFAFLLFLDYAEL
Trigger: GAGCTCAGCATAATCAAGGAAAAGCAAGAAGGCAAATGAGGCGCAGAGTGAGCGAGCTAGGACCTGGGGGAGAAGGACAGAAGATGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563404.1
3UTR CCA 90 bp CCAGGCACCAATGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTaGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCAT +
Preference number: 1 (lower is better)
Translates to: PGTNVFILIVTTSLF*SLQFLDYCRGCCPH
Trigger: ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACATTGGTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp TTAAAGAGACCAGATGTTGGACCTGGTCAAGTCTCAGGAGACAAATaGAAACAGCAGGAAAACCTAGGCAAAAGCCTAGTCACATGGCCA +
Preference number: 1 (lower is better)
Translates to: LKRPDVGPGQVSGDK*KQQENLGKSLVTWP
Trigger: TGGCCATGTGACTAGGCTTTTGCCTAGGTTTTCCTGCTGTTTCCATTTGTCTCCTGAGACTTGACCAGGTCCAACATCTGGTCTCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp AGTCAGGTGCTGCCCTCAGACTCTCTAACTCCCTGGCTATGTAGGTaGTATGTCATGTCTTTTTCTCACAAAGAGATATGGAAACTTACG +
Preference number: 1 (lower is better)
Translates to: SQVLPSDSLTPWLCR*YVMSFSHKEIWKLT
Trigger: CGTAAGTTTCCATATCTCTTTGTGAGAAAAAGACATGACATAGCACCTACATAGCCAGGGAGTTAGAGAGTCTGAGGGCAGCACCTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp CACTTAGTGCAGAACTTAACTGTGTGGTGTCTGGGTCTGCACATATaGATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACC +
Preference number: 1 (lower is better)
Translates to: HLVQNLTVWCLGLHI*MKRKIMEPAIETST
Trigger: GGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCATGCATATGTGCAGACCCAGACACCACACAGTTAAGTTCTGCACTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 90 bp AAGAAACACACCAAAAATACAAACAGCCACCTCCTCACTGTGCCCTaGAATGATAAATGGACTGGTGCTTTCATACCCTTAGCTGCCATC +
Preference number: 1 (lower is better)
Translates to: KKHTKNTNSHLLTVP*NDKWTGAFIPLAAI
Trigger: GATGGCAGCTAAGGGTATGAAAGCACCAGTCCATTTATCATTCCAGGGCACAGTGAGGAGGTGGCTGTTTGTATTTTTGGTGTGTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp TTCAGTTACTTCAGTCAGGTGCTGCCCTCAGACTCTCTAACTCCCTaGCTATGTAGGTGCTATGTCATGTCTTTTTCTCACAAAGAGATA +
Preference number: 1 (lower is better)
Translates to: FSYFSQVLPSDSLTP*LCRCYVMSFSHKEI
Trigger: TATCTCTTTGTGAGAAAAAGACATGACATAGCACCTACATAGCCAGGGAGTTAGAGAGTCTGAGGGCAGCACCTGACTGAAGTAACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp TCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCTTaGAGACATATGATGGCTAATCACCTGGGAGGCTTCTGGAAAATG +
Preference number: 1 (lower is better)
Translates to: SSAIIGRLCAEHFLS*RHMMANHLGGFWKM
Trigger: CATTTTCCAGAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 90 bp CGAGTCCTCTCAGTGCCTCATGGATCACAATGTAGACAATCCACGTaGTGGTCCTTGGCAATACATCATGCTAATTTAATTTATATCTCC +
Preference number: 1 (lower is better)
Translates to: RVLSVPHGSQCRQST*WSLAIHHANLIYIS
Trigger: GGAGATATAAATTAAATTAGCATGATGTATTGCCAAGGACCAGCACGTGGATTGTCTACATTGTGATCCATGAGGCACTGAGAGGACTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 90 bp TGTGTACAAGTATCTATAAAGACAGAACCACCAAACCCAGATTTCTaGGAACCAGGGATCAAATGTGGCTTCCAGTCCAGAGAAAATGCT +
Preference number: 1 (lower is better)
Translates to: CVQVSIKTEPPNPDF*EPGIKCGFQSRENA
Trigger: AGCATTTTCTCTGGACTGGAAGCCACATTTGATCCCTGGTTCTCAGAAATCTGGGTTTGGTGGTTCTGTCTTTATAGATACTTGTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 90 bp TTCACTCTTGCCAGCCCTTTCTTTAGAGGATTAGACTGTTCAGTTTaGCAGCTGTTCAGTTTGACACCTATTACCTGTGTCAATTGTGCT +
Preference number: 1 (lower is better)
Translates to: FTLASPFFRGLDCSV*QLFSLTPITCVNCA
Trigger: AGCACAATTGACACAGGTAATAGGTGTCAAACTGAACAGCTGTCAAACTGAACAGTCTAATCCTCTAAAGAAAGGGCTGGCAAGAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 90 bp ATGGGTATTTCAGTTTTGTACTTGTGTCTACAGAATAGCCCCAAGTaGTTGACACTGTCTAAGCATGTCACAAACATCACCTCACTGAAC +
Preference number: 1 (lower is better)
Translates to: MGISVLYLCLQNSPK*LTLSKHVTNITSLN
Trigger: GTTCAGTGAGGTGATGTTTGTGACATGCTTAGACAGTGTCAAGCACTTGGGGCTATTCTGTAGACACAAGTACAAAACTGAAATACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp GTCCTCTCAGTGCCTCATGGATCACAATGTAGACAATCCACGTGCTaGTCCTTGGCAATACATCATGCTAATTTAATTTATATCTCCAGA +
Preference number: 1 (lower is better)
Translates to: VLSVPHGSQCRQSTC*SLAIHHANLIYISR
Trigger: TCTGGAGATATAAATTAAATTAGCATGATGTATTGCCAAGGACCAGCACGTGGATTGTCTACATTGTGATCCATGAGGCACTGAGAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp ATTGCTAACACAGTGTCTGACACTTGTGTTGTCATCAGCAATCATTaGCAGATTATGTGCCGAACACTTCCTTTCTTGGAGACATATGAT +
Preference number: 1 (lower is better)
Translates to: IANTVSDTCVVISNH*QIMCRTLPFLETYD
Trigger: ATCATATGTCTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACAACACAAGTGTCAGACACTGTGTTAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 90 bp ATTAAGTGTATTGTATATAATTACCAAGAAAACAAAGAAACTGGGTaGAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTG +
Preference number: 1 (lower is better)
Translates to: IKCIVYNYQENKETG*KLWDRLTMGLVRSL
Trigger: CAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCAGTTTCTTTGTTTTCTTGGTAATTATATACAATACACTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp TATCATCCCAATGGTCACCTAAGTTTTCTGCCTATAACATTCACATaGACATATAACACTCTTTCAGTTCCTCCTTGTGGAACCACGATT +
Preference number: 1 (lower is better)
Translates to: YHPNGHLSFLPITFT*TYNTLSVPPCGTTI
Trigger: AATCGTGGTTCCACAAGGAGGAACTGAAAGAGTGTTATATGTCCATGTGAATGTTATAGGCAGAAAACTTAGGTGACCATTGGGATGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 90 bp TTTGTACTTAGCAAATACTCGCTTATGAAATGGAGTCTCATCTTATaGGAGTATCTGACACATTCATCACAGAAAGCACTCTCCAGCAAG +
Preference number: 1 (lower is better)
Translates to: FVLSKYSLMKWSLIL*EYLTHSSQKALSSK
Trigger: CTTGCTGGAGAGTGCTTTCTGTGATGAATGTGTCAGATACTCCCATAAGATGAGACTCCATTTCATAAGCGAGTATTTGCTAAGTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 90 bp CCACTGTTCTATGGTACGTCTCCACAAAGGGAAATCTTTTGTATCTaGTTAATAACACAATACTTTCAGCCTCAGTCACATATTCCTCCT +
Preference number: 1 (lower is better)
Translates to: PLFYGTSPQREIFCI*LITQYFQPQSHIPP
Trigger: AGGAGGAATATGTGACTGAGGCTGAAAGTATTGTGTTATTAATCAGATACAAAAGATTTCCCTTTGTGGAGACGTACCATAGAACAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 90 bp CCCAGACTCCTGTATTTCATTCCAAACTCAGTCTTTTTACTTGCATaGCTCACTAGCACCTCAGATTTAATATATAAAATAGGACCTGAT +
Preference number: 1 (lower is better)
Translates to: PRLLYFIPNSVFLLA*LTSTSDLIYKIGPD
Trigger: ATCAGGTCCTATTTTATATATTAAATCTGAGGTGCTAGTGAGGCATGCAAGTAAAAAGACTGAGTTTGGAATGAAATACAGGAGTCTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 90 bp ATACTGGTACTGATATTTTGTCCCATTTCACTCTCTTCTCATACGTaGGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGT +
Preference number: 1 (lower is better)
Translates to: ILVLIFCPISLSSHT*VLKNMYILALHCMC
Trigger: ACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACGTATGAGAAGAGAGTGAAATGGGACAAAATATCAGTACCAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACAGGGATGGGGAGAGCTaGGAACACAGGTGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHRDGES*EHRWRS
Trigger: GGACCTCCACCTGTGTTCGCAGCTCTCCCCATCCCT...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCAGGCCAAAGGCCCCCATaGAGGCGTGGGGAAGGCACA +
Preference number: 2 (lower is better)
Translates to: LALASGYCLSGSGLHPLPGQRPP*RRGEGT
Trigger: TGTGCCTTCCCCACGCCTCCATGGGGGCCTTTGGCC...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACCACAGGTCTGTGGGTTaGGGCCACTCTGCATCAGGC +
Preference number: 2 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHHRSVG*GHSASG
Trigger: GCCTGATGCAGAGTGGCCCCAACCCACAGACCTGTG...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp TCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCGCTGCTACCGGCCTTTaGGCACTTCCTGTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: SGPRLWLLPLRQWTPPSPAATGL*ALPVPG
Trigger: ACCTGGCACAGGAAGTGCTCAAAGGCCGGTAGCAGC...GGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACCTTTCAAGGCCCACATaGCTTTTCCTGGCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHLSRPT*LFLALS
Trigger: GGAGAGAGCCAGGAAAAGGCATGTGGGCCTTGAAAG...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCATTCCAATGGCTGAGATaGGGCATAGGGCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: LALASGYCLSGSGLHPLPFQWLR*GIGPSP
Trigger: TGGGCTTGGCCCTATGCCTCATCTCAGCCATTGGAA...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCAGCATGCTTTGACCTCTaGCCTCTGACCTCGACTCTC +
Preference number: 2 (lower is better)
Translates to: LALASGYCLSGSGLHPLPACFDL*PLTSTL
Trigger: GAGAGTCGAGGTCAGAGGTCAGAGGTCAAAGCATGC...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACCTCAGCCCTCTGTCCTaGTCTGTTACAACTTTGAGT +
Preference number: 2 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHLSPLS*SVTTLS
Trigger: ACTCAAAGTTGTAACAGACCAGGACAGAGGGCTGAG...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGACATTTGCTGGGTTCTaGCTGGGCATCTACCCAGGG +
Preference number: 2 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQTFAGF*LGIYPG
Trigger: CCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGACAATCTTGGCTCACTaGAACCTCCACTCCCCGGGT +
Preference number: 2 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQTILAH*NLHSPG
Trigger: ACCCGGGGAGTGGAGGTTGCAGTGAGCCAAGATTGT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TCCATCATGCATGCTGCCCCAGCCAAGCTGCTACCGGCCTTTGAGCACTTCCTGCTCTCCACTAGCCTGTaGTCTGACCCTTGCACACCT +
Preference number: 2 (lower is better)
Translates to: SIMHAAPAKLLPAFEHFLLSTSL*SDPCTP
Trigger: AGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAG...CAGGAAGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAGCATGCATGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGGAGGCCTTGTGCTGCTaGGAACATCACCCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQEALCC*EHHPGE
Trigger: TTCTCCTGGGTGATGTTCCCAGCAGCACAAGGCCTC...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCACCACCATGCCCAGCCTaGATCATTGTCTTAAACTTA +
Preference number: 2 (lower is better)
Translates to: LALASGYCLSGSGLHPLPPPCPA*IIVLNL
Trigger: TAAGTTTAAGACAATGATTCAGGCTGGGCATGGTGG...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp GCCGAACACTTCCTTTCTTGGAGACATATGATGGCTAATCACCTGGGAGGCTTCTGGACTCCTGGCTGCTaGCTCCAGGCAAGGCCGGCT +
Preference number: 2 (lower is better)
Translates to: AEHFLSWRHMMANHLGGFWTPGC*LQARPA
Trigger: AGCCGGCCTTGCCTGGAGTCAGCAGCCAGGAGTCCA...GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp CCAATGGCTGAGATGAGGCATAGGGCCAAGCCCATCAGCAACAGCATAGGGAGCGTACTTAGGCAGGGATaGGGAGAGCTGCGAACACAG +
Preference number: 2 (lower is better)
Translates to: PMAEMRHRAKPISNSIGSVLRQG*GELRTQ
Trigger: CTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTAC...GCTCCCTATGCTGTTGCTGATGGGCTTGGCCCTATGCCTCATCTCAGCCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp CCAATGGCTGAGATGAGGCATAGGGCCAAGCCCATCAGCAACAGCATAGGGAGCGGAGTGGAGGATGGGTaGAGTTGGCCTGCTAGAATC +
Preference number: 2 (lower is better)
Translates to: PMAEMRHRAKPISNSIGSGVEDG*SWPARI
Trigger: GATTCTAGCAGGCCAACTCCACCCATCCTCCACTCC...GCTCCCTATGCTGTTGCTGATGGGCTTGGCCCTATGCCTCATCTCAGCCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp TCCATCATGCATGCTGCCCCAGCCAAGCTGCTACCGGCCTTTGAGCACTTCCTGCCACATGCCTTTTCCTaGCTCTCTCCACTAGCCTGT +
Preference number: 2 (lower is better)
Translates to: SIMHAAPAKLLPAFEHFLPHAFS*LSPLAC
Trigger: ACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGG...CAGGAAGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAGCATGCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp TCCATCATGCATGCTGCCCCAGCCAAGCTGCTACCGGCCTTTGAGCACTTCCTGCTTAAGGCCTTGGCTTaGAGCTGCCCCATCTTACTC +
Preference number: 2 (lower is better)
Translates to: SIMHAAPAKLLPAFEHFLLKALA*SCPILL
Trigger: GAGTAAGATGGGGCAGCTCCAAGCCAAGGCCTTAAG...CAGGAAGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAGCATGCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp TCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCCAGAACTTAACTGTGTaGTGTCTGGGTCTGCACATA +
Preference number: 2 (lower is better)
Translates to: SGPRLWLLPLRQWTPPSPQNLTV*CLGLHI
Trigger: TATGTGCAGACCCAGACACCACACAGTTAAGTTCTG...GGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 90 bp CATGTCAGACGTCAGGCATCCTGGGGCTTATCCATCACTGCCCAGTaGATAAGGCAGCCTGAAGCCCCTCTCTTGATGGTGAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: HVRRQASWGLSITAQ*IRQPEAPLLMVNAQ
Trigger: CTGGGCATTCACCATCAAGAGAGGGGCTTCAGGCTGCCTTATCAACTGGGCAGTGATGGATAAGCCCCAGGATGCCTGACGTCTGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp GCTGGCTTGGAGATGCTAAGAAATGTGGCAAAGGTCGTGTGGCTGTaGACCCCTAAAGCCCATGCCCTTCCATCATGCATGCTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: AGLEMLRNVAKVVWL*TPKAHALPSCMLPQ
Trigger: CTGGGGCAGCATGCATGATGGAAGGGCATGGGCTTTAGGGGTCAACAGCCACACGACCTTTGCCACATTTCTTAGCATCTCCAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp TCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCCTGCTTGGGAATCATTaGGATGAATCACTTCGTCAA +
Preference number: 2 (lower is better)
Translates to: SGPRLWLLPLRQWTPPSPLLGNH*DESLRQ
Trigger: TTGACGAAGTGATTCATCTCAATGATTCCCAAGCAG...GGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGAGCTCTTCAGGTCCTaGCATGAGAGGCCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIELFRS*HERPCA
Trigger: AGCACAAGGCCTCTCATGGCAGGACCTGAAGAGCTC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGACCCTCACCTGCACTTaGTTCTATTGTCAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQTLTCT*FYCQLA
Trigger: AGCAAGCTGACAATAGAATCAAGTGCAGGTGAGGGT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp TCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCTGGGAATCATTGAGATaGATCACTTCGTCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: SGPRLWLLPLRQWTPPSPWESLR*ITSSSH
Trigger: ATGACTTGACGAAGTGATTCATCTCAATGATTCCCA...GGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCCTCTGCCTGCCATGTaGCTGGTCGGCCTGGTACCA +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQPLPAM*LVGLVP
Trigger: TGGTACCAGGCCGACCAGGCACATGGCAGGCAGAGG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCACTGGGTCTGCACATATaGATGAAGAGGAAAATAATG +
Preference number: 2 (lower is better)
Translates to: LALASGYCLSGSGLHPLPLGLHI*MKRKIM
Trigger: CATTATTTTCCTCTTCATGCATATGTGCAGACCCAG...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCAAAACAGGGCACATGTaGCCTTTTGTTCCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCKTGHM*PFVPSG
Trigger: CCCAGAAGGAACAAAAGGCCACATGTGCCCTGTTTT...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 90 bp GCATATACATTTGCTGGGTTCTGCCTGGGCATCTACCCAGGGGAGTaGTATCTGAGGGCCGAGTCCTCTCAGTGCCTCATGGATCACAAT +
Preference number: 2 (lower is better)
Translates to: AYTFAGFCLGIYPGE*YLRAESSQCLMDHN
Trigger: ATTGTGATCCATGAGGCACTGAGAGGACTCGGCCCTCAGATACAACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGTATATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp CCTACAGCACAAAAGACTGTATGTAGTACGAGGTGCTGGAGAACCTaGTGGGTGGAAGGCAGTGACATTCCGAGTTGGACTCTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: PTAQKTVCSTRCWRT*WVEGSDIPSWTLRA
Trigger: GGCCCTCAGAGTCCAACTCGGAATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCTCGTACTACATACAGTCTTTTGTGCTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp ACAACTCATATCTGTAATCCTGGGCCTCCTGTTAATTCAGCAGCATaGAGTTCACTGAGCCACCTGACCCCAGCACAGGCTCAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: TTHICNPGPPVNSAA*SSLSHLTPAQAQAE
Trigger: CTCAGCCTGAGCCTGTGCTGGGGTCAGGTGGCTCAGTGAACTCAATGCTGCTGAATTAACAGGAGGCCCAGGATTACAGATATGAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp TTATCCATCACTGCCCAGTTGATAAGGCAGCCTGAAGCCCCTCTCTaGATGGTGAATGCCCAGATCCAGAGCCTAAGGCTAAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: LSITAQLIRQPEAPL*MVNAQIQSLRLRTR
Trigger: TCTGGTCCTTAGCCTTAGGCTCTGGATCTGGGCATTCACCATCAAGAGAGGGGCTTCAGGCTGCCTTATCAACTGGGCAGTGATGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGCCAAAGTCAGTGTTCTaGACCAATGAACTATGTTGC +
Preference number: 2 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQPKSVF*TNELCC
Trigger: GCAACATAGTTCATTGGTTCAGAACACTGACTTTGG...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGACTCTCCAGCCCAGGTaGCAGAGAGAGACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQTLQPR*QRETLS
Trigger: AGACAGGGTCTCTCTCTGTCACCTGGGCTGGAGAGT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTGTTTGAAGGTATTTTaGCTGCAGGTGAGACTGGTT +
Preference number: 2 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQCLKVF*LQVRLV
Trigger: AACCAGTCTCACCTGCAGGCAAAATACCTTCAAACA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAAAGCTATGGTCAGGTaGTCACTCAGCTGGAAGTGT +
Preference number: 2 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIKAMVR*SLSWKC
Trigger: ACACTTCCAGCTGAGTGAGCACCTGACCATAGCTTT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp GCCGAACACTTCCTTTCTTGGAGACATATGATGGCTAATCACCTGGGAGGCTTCCTCAGTTACTGGCTTTaGTCCCACTGCCCATGTGGG +
Preference number: 2 (lower is better)
Translates to: AEHFLSWRHMMANHLGGFLSYWL*SHCPCG
Trigger: CCCACATGGGCAGTGGGAGCAAAGCCAGTAACTGAG...GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp TGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGACTGCCCCAGCCAAGCTaGTACCGGCCTTTGAGCACT +
Preference number: 2 (lower is better)
Translates to: CVYFDSDHLPVLVVAVPGLPQPS*YRPLST
Trigger: AGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAG...TCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGACTCTCTAACTCCCTaGCTATGTAGGTGCTATGTC +
Preference number: 2 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIDSLTP*LCRCYV
Trigger: GACATAGCACCTACATAGCCAGGGAGTTAGAGAGTC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATGAGGATGGGTGGAGTTaGCCTGCTAGAATCTTCTGT +
Preference number: 2 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHEDGWS*PARIFC
Trigger: ACAGAAGATTCTAGCAGGCCAACTCCACCCATCCTC...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGCCTTATGTTTCAGTGTaGGCAATGAAGAGGTCTTTT +
Preference number: 2 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQPYVSV*AMKRSF
Trigger: AAAAGACCTCTTCATTGCTCACACTGAAACATAAGG...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATCCTCAGGGCAGCCCTaGAAGTGCCCTTTACTCTCA +
Preference number: 2 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSSSGQP*KCPLLS
Trigger: TGAGAGTAAAGGGCACTTTCAGGGCTGCCCTGAGGA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCATATGCAGCAGGTCTaGGGGCAGAGTAAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQHMQQV*GQSKPC
Trigger: GCAAGGCTTACTCTGCCCTCAGACCTGCTGCATATG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp GTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCGAGGCTTCTGGAAAATaGGTATCAGGAAGTGACACT +
Preference number: 2 (lower is better)
Translates to: VTTSLFWSLQFLDYCRGCEASGK*VSGSDT
Trigger: AGTGTCACTTCCTGATACTCATTTTCCAGAAGCCTC...GCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAGATGCATATACATTTaGTGGGTTCTGCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIRCIYI*WVLPGH
Trigger: ATGCCCAGGCAGAACCCAGCAAATGTATATGCATCT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCTCAGAGCCCAGAGATaGATATACATTTGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: WVKALGQTHHGLGKEPAILRAQR*IYICWV
Trigger: AACCCAGCAAATGTATATGCATCTCTGGGCTCTGAG...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAGCAGTACTGGGAGCTaGACACCACTGGCCTTAGAG +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQSSTGS*TPLALE
Trigger: CTCTAAGGCCAGTGGTGTGCAGCTCCCAGTACTGCT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAGTCAATGCTTTGTCTaGTTTCCCATAGGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: WVKALGQTHHGLGKEPAISQCFV*FPIGLL
Trigger: CAACAGCCCTATGGGAAACCAGACAAAGCATTGACT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACGTGCTGGTCCTTaGCAATACATCATGCTAATT +
Preference number: 2 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIPRAGP*QYIMLI
Trigger: AATTAGCATGATGTATTGCCAAGGACCAGCACGTGG...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGGTGGGTGGACTGCTTaGAGTCAGGAGTTTGAAACC +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQGGWTA*SQEFET
Trigger: GGTTTCAAACTCCTGACTTCAAGCAGTCCACCCACC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATTTTCTTGGAGACATATaGTGGCTAATCACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHFLGDI*WLITWE
Trigger: CTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAA...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGGGCTTATCCATCACTaGCCAGTTGATAAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQGLIHH*PVDKAA
Trigger: GGCTGCCTTATCAACTGGGCAGTGATGGATAAGCCC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTGATAGGATACTTGTTTaGTGGAGGCTTCACAGCGCC +
Preference number: 2 (lower is better)
Translates to: CVVARISTLRAAFVFLFFDRILV*WRLHSA
Trigger: GGCGCTGTGAAGCCTCCAGCAAACAAGTATCCTATC...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563790.5
3UTR-3UTR CCA 90 bp TGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCTTGGAGACAGCTGCGAACACAGGTaGAGGTCCAGCTGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: CHQQSLADYVPNTSFLGDSCEHR*RSSWVC
Trigger: ACACACCCAGCTGGACCTCCACCTGTGTTCGCAGCT...GTCTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 90 bp TTCAGTTTGACAGCTGTTCAGTTTGACACCTATTACCTGTGTCAATaGTGCTTTGCCTGCACAATCAGGCCTCCTCTGCCTGCCATGTGC +
Preference number: 2 (lower is better)
Translates to: FSLTAVQFDTYYLCQ*CFACTIRPPLPAMC
Trigger: GCACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGACACAGGTAATAGGTGTCAAACTGAACAGCTGTCAAACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp GCCTCAGTCACATATTCCTCCTTGGTTGTGAATACTCTGAGCCCTTaGGTAACAGTGGCTGCAAGTGTAGGGGTGTTTCAGGACAATCTG +
Preference number: 2 (lower is better)
Translates to: ASVTYSSLVVNTLSP*VTVAASVGVFQDNL
Trigger: CAGATTGTCCTGAAACACCCCTACACTTGCAGCCACTGTTACCAAAGGGCTCAGAGTATTCACAACCAAGGAGGAATATGTGACTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCACATAGGGAAAGGGTATaGGCTCTTGCTGCAAGGAGT +
Preference number: 2 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSHRERV*ALAARS
Trigger: ACTCCTTGCAGCAAGAGCTCATACCCTTTCCCTATG...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAGCCTCCCGAGCAGCTaGGATTACAGGCGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVSLPSS*DYRRLP
Trigger: TGGCAGACGCCTGTAATCTCAGCTGCTCGGGAGGCT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CCGGCTTCCCTTCTCTGTGAATTAACCATCCCCACACTCCTCTCCATTTCTTTTAGAATCTTCTGTGACTaGGCCGGCAGTGACCATCAT +
Preference number: 2 (lower is better)
Translates to: PASLLCELTIPTLLSISFRIFCD*AGSDHH
Trigger: ATGATGGTCACTGCCGGCTCAGTCACAGAAGATTCT...AAAAGAAATGGAGAGGAGTGTGGGGATGGTTAATTCACAGAGAAGGGAAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp TGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGAGCACACCTTTCCAGATaGGTTTCCTGCTGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: CVYFDSDHLPVLVVAVPGAHLSR*VSCCCL
Trigger: CAGACAGCAGCAGGAAACTCATCTGGAAAGGTGTGC...TCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGCCACCTCCTCACTGTaGCCTGGAATGATAAATGGA +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQATSSL*PGMING
Trigger: TCCATTTATCATTCCAGGGCACAGTGAGGAGGTGGC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAACAGTATGGGAGCCATaGTCCTGCTCAGAGTTCCTA +
Preference number: 2 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSTVWEP*SCSEFL
Trigger: TAGGAACTCTGAGCAGGAGCATGGCTCCCATACTGT...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCACACTTAACATCCTATaGCTTAGGAGAAAGCTATGG +
Preference number: 2 (lower is better)
Translates to: WVKALGQTHHGLGKEPAITLNIL*LRRKLW
Trigger: CCATAGCTTTCTCCTAAGGCATAGGATGTTAAGTGT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGACCATGTAGGAGTCTaGCAAATCTGCTGCCTTCAG +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQDHVGV*QICCLQ
Trigger: CTGAAGGCAGCAGATTTGGCAGACTCCTACATGGTC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTCAATCAGGCCTCCTCTaGCTGCCATGTGCCTGGTCG +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIQSGLL*LPCAWS
Trigger: CGACCAGGCACATGGCAGGCAGAGGAGGCCTGATTG...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGGACTACAGAGCAGCTaGCAGCCGCAGGGGCATTAC +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIGLQSS*QPQGHY
Trigger: GTAATGCCCCTGCGGCTGCCAGCTGCTCTGTAGTCC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAAAAGCCTAGTCACATaGCCAGGGTCAACAGTCAGG +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQKSLVT*PGSTVR
Trigger: CCTGACTGTTGACCCTGGCCATGTGACTAGGCTTTT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTGTGCCTGGTCGGCCTaGTACCAGTCCCTGATGCAG +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFICAWSA*YQSLMQ
Trigger: CTGCATCAGGGACTGGTACCAGGCCGACCAGGCACA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp ACTTGTGTTGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCCCACTTGTAGGGGAGTaGAGGATGGGTGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: TCVVISNHWQIMCRTLPFPLVGE*RMGGVG
Trigger: GCCAACTCCACCCATCCTCCACTCCCCTACAAGTGG...GAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACAACACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp GCCGAACACTTCCTTTCTTGGAGACATATGATGGCTAATCACCTGGGAGGCTTCCTAGGATACGCCATGTaGAATAGGGTAACCACACTG +
Preference number: 2 (lower is better)
Translates to: AEHFLSWRHMMANHLGGFLGYAM*NRVTTL
Trigger: CAGTGTGGTTACCCTATTCCACATGGCGTATCCTAG...GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 90 bp AGCCTGAATCATTGTCTTAAACTTAGTGGTCACTTCTATGCTTCCTaGGCCACTCAGTTACTGGCTTTGCTCCCACTGCCCATGTGGGAT +
Preference number: 2 (lower is better)
Translates to: SLNHCLKLSGHFYAS*ATQLLALLPLPMWD
Trigger: ATCCCACATGGGCAGTGGGAGCAAAGCCAGTAACTGAGTGGCCAAGGAAGCATAGAAGTGACCACTAAGTTTAAGACAATGATTCAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp ATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACCTATAGTGCACCTAGCAGCTCCCAGGCATaGCCTTCTCATGGCAGATAC +
Preference number: 2 (lower is better)
Translates to: MKRKIMEPAIETSTYSAPSSSQA*PSHGRY
Trigger: GTATCTGCCATGAGAAGGGCATGCCTGGGAGCTGCT...AGGTGCACTATAGGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTTTCTTCCTCACTGCTTaGATCTGCAGTATTTCCACC +
Preference number: 2 (lower is better)
Translates to: CVVARISTLRAAFVFLFFFFLTA*ICSIST
Trigger: GGTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAA...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563790.5
3UTR-3UTR GCA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTCACCTTCTTCCTCACTaGTTGCATCTGCAGTATTTC +
Preference number: 2 (lower is better)
Translates to: CVVARISTLRAAFVFLFFHLLPH*LHLQYF
Trigger: GAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTG...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563790.5
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAAAGAATTATGGGTCTaGTTCCCACAGCTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQKELWV*FPQLLA
Trigger: AGCCAAGAGCTGTGGGAATCAGACCCATAATTCTTT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp ATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACCTATAGTGCACCTTGTGGGATGTGGGTTTaGTTCTGGGCAGCCACTTGT +
Preference number: 2 (lower is better)
Translates to: MKRKIMEPAIETSTYSAPCGMWV*FWAATC
Trigger: ACAAGTGGCTGCCCAGAATCAAACCCACATCCCACA...AGGTGCACTATAGGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp TGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGAAAAGCCATTGTCACTTaGACATCAGCCACCTGTCTG +
Preference number: 2 (lower is better)
Translates to: CVYFDSDHLPVLVVAVPGKAIVT*TSATCL
Trigger: CAGACAGGTGGCTGATGTGCAAGTGACAATGGCTTT...TCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGCAAACAATGAACTATaGCACAGAGTCCTACAGCAC +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQANNEL*HRVLQH
Trigger: GTGCTGTAGGACTCTGTGCCATAGTTCATTGTTTGC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp ATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACCTATAGTGCACCTAGGTGGAGGTCCAGCTaGGTGTGTAGAAGGGGTATT +
Preference number: 2 (lower is better)
Translates to: MKRKIMEPAIETSTYSAPRWRSS*VCRRGI
Trigger: AATACCCCTTCTACACACCCAGCTGGACCTCCACCT...AGGTGCACTATAGGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAGAAACCTCCTCAGGTaGGACTGTTTTTCTGAACTT +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQRNLLR*DCFSEL
Trigger: AAGTTCAGAAAAACAGTCTCACCTGAGGAGGTTTCT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTCGAGCACCAGATCATaGATGGGTATTTCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQSSTRS*MGISVL
Trigger: CAAAACTGAAATACCCATTCATGATCTGGTGCTCGA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGTCTTTTTACTTGCATaGCTCACTAGCACCTCAGAT +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQVFLLA*LTSTSD
Trigger: ATCTGAGGTGCTAGTGAGGCATGCAAGTAAAAAGAC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTTGCTGGGTTCTGCCTaGGCATCTACCCAGGGGAGT +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESLLGSA*ASTQGS
Trigger: ACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTAGGTGCTCACTCAGCTaGAAGTGTGGCCACCATAAG +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIRCSLS*KCGHHK
Trigger: CTTATGGTGGCCACACTTCCAGCTGAGTGAGCACCT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAGAGTGAGTAGTTATTaGGGCCTTGATTTCAGACCA +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQRVSSY*GLDFRP
Trigger: TGGTCTGAAATCAAGGCCCCAATAACTACTCACTCT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAAAATTAGCTGGGTGTaGTGGTGGGCATCTATAATC +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQKISWV*WWASII
Trigger: GATTATAGATGCCCACCACCACACCCAGCTAATTTT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCTTGGAGACGCCTTTTGTTCCTTCTaGGGAGAATGTGAATGCTGG +
Preference number: 2 (lower is better)
Translates to: CHQQSLADYVPNTSFLGDAFCSF*GECECW
Trigger: CCAGCATTCACATTCTCCCCAGAAGGAACAAAAGGC...GTCTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 90 bp ACTCTGGATTGTTTGAAGGTATTTTGCCTGCAGGTGAGACTGGTTTaGAGGGCACAGAAACGTAGCCTGAATGAACCATTCAGAACTCAT +
Preference number: 2 (lower is better)
Translates to: TLDCLKVFCLQVRLV*RAQKRSLNEPFRTH
Trigger: ATGAGTTCTGAATGGTTCATTCAGGCTACGTTTCTGTGCCCTCAAAACCAGTCTCACCTGCAGGCAAAATACCTTCAAACAATCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp GAGACCATGTCCTTGTCATTGCTAACACAGTGTCTGACACTTGTGTaGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTT +
Preference number: 2 (lower is better)
Translates to: ETMSLSLLTQCLTLV*SSAIIGRLCAEHFL
Trigger: AAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACAACACAAGTGTCAGACACTGTGTTAGCAATGACAAGGACATGGTCTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGATGATACAAGCCTTCTaGGGAAATTTTCTGACAGGA +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQMIQAF*GNFLTG
Trigger: TCCTGTCAGAAAATTTCCTCAGAAGGCTTGTATCAT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATTTCATACCCTTAGCTaGCATCATCACCATCATCAT +
Preference number: 2 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSFHTLS*HHHHHH
Trigger: ATGATGATGGTGATGATGGCAGCTAAGGGTATGAAA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTAATGTACATACAAACTaGGGTTCTGTCAATGACAAC +
Preference number: 2 (lower is better)
Translates to: CVVARISTLRAAFVFLFFNVHTN*GSVNDN
Trigger: GTTGTCATTGACAGAACCCCAGTTTGTATGTACATT...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563790.5
3UTR-3UTR CCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATTAGGAATTAATTCCTaGGTTCTGTCACAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSLGINS*VLSQRG
Trigger: TCCTCTCTGTGACAGAACCCAGGAATTAATTCCTAA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCTTTTAATCCTGCTGTaGTCTGTTTTACCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQLLILL*SVLPFP
Trigger: TGGAAAGGGTAAAACAGACCACAGCAGGATTAAAAG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTGACTATGAGCAGTACTaGGAGCTGCACACCACTGGC +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESDYEQY*ELHTTG
Trigger: GCCAGTGGTGTGCAGCTCCCAGTACTGCTCATAGTC...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCTCTCTTCTCATACGTaGGTACTTAAGAATATGTAC +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQLSSHT*VLKNMY
Trigger: GTACATATTCTTAAGTACTCACGTATGAGAAGAGAG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTTTCCCCAAATTTGGTaGTTTTGTGATGTGTACAAG +
Preference number: 2 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQFPQIW*FCDVYK
Trigger: CTTGTACACATCACAAAATCACCAAATTTGGGGAAA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAACCCTTTTTGTATTTTaGCAGTCACAAGTCCATTGT +
Preference number: 2 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSTLFVF*QSQVHC
Trigger: ACAATGGACTTGTGACTGTCAAAATACAAAAAGGGT...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTATAGCCCCAAGTGCTTaGCACTGTCTAAGCATGTCA +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIIAPSA*HCLSMS
Trigger: TGACATGCTTAGACAGTGTCAAGCACTTGGGGCTAT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGCCCCTACACTAGTCTaGGCTCTCATTACCTTACTT +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIAPTLV*ALITLL
Trigger: AAGTAAGGTAATGAGAGCTCAGACTAGTGTAGGGGC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAATTCAGAACTCATCATaGATCCAACTGAACACGTTT +
Preference number: 2 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSIQNSS*IQLNTF
Trigger: AAACGTGTTCAGTTGGATGCATGATGAGTTCTGAAT...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp CTGATTAATAACACAATACTTTCAGCCTCAGTCACATATTCCTCCTaGGTTGTGAATACTCTGAGCCCTTTGGTAACAGTGGCTGCAAGT +
Preference number: 2 (lower is better)
Translates to: LINNTILSASVTYSS*VVNTLSPLVTVAAS
Trigger: ACTTGCAGCCACTGTTACCAAAGGGCTCAGAGTATTCACAACCAAGGAGGAATATGTGACTGAGGCTGAAAGTATTGTGTTATTAATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCATCCATTAGGACTATaGGCAGTACTGGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESHPLGL*AVLGAA
Trigger: TGCAGCTCCCAGTACTGCTCATAGTCCTAATGGATG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp ATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACCTATAGTGCACCTCATTGGCAGATTATGTaGCGAACACTTCCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: MKRKIMEPAIETSTYSAPHWQIM*RTLPFL
Trigger: CAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATG...AGGTGCACTATAGGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTCCCTGGAATGATAAATaGACTGGTGCTTTCATACCC +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIPWNDK*TGAFIP
Trigger: GGGTATGAAAGCACCAGTCCATTTATCATTCCAGGG...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAGACAATCCACGTGCTaGTCCTTGGCAATACATCAT +
Preference number: 2 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVRQSTC*SLAIHH
Trigger: ATGATGTATTGCCAAGGACCAGCACGTGGATTGTCT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTATGGCTATCATCCCAATaGTCACCTAAGTTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVWLSSQ*SPKFSA
Trigger: GGCAGAAAACTTAGGTGACCATTGGGATGATAGCCA...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp TCAGTGCCTCATGGATCACAATGTAGACAATCCACGTGCTGGTCCTaGGCAATACATCATGCTAATTTAATTTATATCTCCAGAGTAGCA +
Preference number: 2 (lower is better)
Translates to: SVPHGSQCRQSTCWS*AIHHANLIYISRVA
Trigger: TGCTACTCTGGAGATATAAATTAAATTAGCATGATGTATTGCCAAGGACCAGCACGTGGATTGTCTACATTGTGATCCATGAGGCACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp CCGGGACCCACTGTTCTATGGTACGTCTCCACAAAGGGAAATCTTTaGTATCTGATTAATAACACAATACTTTCAGCCTCAGTCACATAT +
Preference number: 2 (lower is better)
Translates to: PGPTVLWYVSTKGNL*YLINNTILSASVTY
Trigger: ATATGTGACTGAGGCTGAAAGTATTGTGTTATTAATCAGATACAAAAGATTTCCCTTTGTGGAGACGTACCATAGAACAGTGGGTCCCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR GCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTGGGAGCCATGCTCCTaGTCAGAGTTCCTAGAATGT +
Preference number: 2 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNWEPCS*SEFLEC
Trigger: ACATTCTAGGAACTCTGAGCAGGAGCATGGCTCCCA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGATTCCCACAGCTCTTaGCTGAGCTTTAATATCTAC +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIDSHSS*LSFNIY
Trigger: GTAGATATTAAAGCTCAGCCAAGAGCTGTGGGAATC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp CAAGGACTAAATTTAATGAAAGACTCTGACATTAAAGACTCTGGATaGTTTGAAGGTATTTTGCCTGCAGGTGAGACTGGTTTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: QGLNLMKDSDIKDSG*FEGILPAGETGFEG
Trigger: GCCCTCAAAACCAGTCTCACCTGCAGGCAAAATACCTTCAAACAATCCAGAGTCTTTAATGTCAGAGTCTTTCATTAAATTTAGTCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp AGTGAGGATAATAACAGTAGCTTTCTCATGGAATTGCTGTTAGGGTaGGATGAGGTAATACATGTAAAGGGCTTAAAACAGTGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: SEDNNSSFLMELLLG*DEVIHVKGLKQCLA
Trigger: TGCCAGACACTGTTTTAAGCCCTTTACATGTATTACCTCATCCAACCCTAACAGCAATTCCATGAGAAAGCTACTGTTATTATCCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTCTGAGGAAATTTTCTaGCAGGAGCTTTTAATCCTG +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFISEEIF*QELLIL
Trigger: CAGGATTAAAAGCTCCTGTCAGAAAATTTCCTCAGA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTTTGTGGTGGAGCTGTaGTTTGACTCTGGATGTCTA +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESFVVEL*FDSGCL
Trigger: TAGACATCCAGAGTCAAATCACAGCTCCACCACAAA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTACAACTGAGTCTGTATaGAGGATCTCCAGAACGCAA +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESTTESV*RISRTQ
Trigger: TTGCGTTCTGGAGATCCTGCATACAGACTCAGTTGT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTATAGGCTATGTGCTCTaGTGCTGTAACAAATACTCA +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIIGYVL*CCNKYS
Trigger: TGAGTATTTGTTACAGCAGCAGAGCACATAGCCTAT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAAATCTAGGGTCCACTaGGCTGGTAAATATGTAAGT +
Preference number: 2 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVKSRVH*AGKYVS
Trigger: ACTTACATATTTACCAGCCCAGTGGACCCTAGATTT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATCTTAGGAGAAAGCTATaGTCAGGTGCTCACTCAGCT +
Preference number: 2 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNLRRKL*SGAHSA
Trigger: AGCTGAGTGAGCACCTGACCATAGCTTTCTCCTAAG...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTACTCGCTTATGAAATaGAGTCTCATCTTATGGGAG +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIYSLMK*SLILWE
Trigger: CTCCCATAAGATGAGACTCCATTTCATAAGCGAGTA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAACATGGCCTCAAAACTaGAGGACAATTTTAATTTCG +
Preference number: 2 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVTWPQN*RTILIS
Trigger: CGAAATTAAAATTGTCCTTCAGTTTTGAGGCCATGT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTTCAACTACAAACCGTaGATACGCGAAAGATGTTCC +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESFNYKP*IRERCS
Trigger: GGAACATCTTTCGCGTATTCACGGTTTGTAGTTGAA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATCACAGAAACGTAGCCTaGATGAACCATTCAGAACTC +
Preference number: 2 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNHRNVA*MNHSEL
Trigger: GAGTTCTGAATGGTTCATTCAGGCTACGTTTCTGTG...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGGGATCTTATTTTGTTaGCCAGCTTATTCTCAAATG +
Preference number: 2 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIGILFC*PAYSQM
Trigger: CATTTGAGAATAAGCTGGGCAACAAAATAAGATCCC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAATGTACATACAAACTaGGGTTCTGTCAATGACAAC +
Preference number: 2 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVNVHTN*GSVNDN
Trigger: GTTGTCATTGACAGAACCCCAGTTTGTATGTACATT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 90 bp ATTAAACATAGCATATGGAGTTCTTCCTCAGCTCTTGGCCTATCGTaGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: IKHSIWSSSSALGLS*YLQTRVLHKNKGRR
Trigger: TCTTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGAACTCCATATGCTATGTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTTGGAACGCAATTTGTaGACCACAACTGAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNLERNL*TTTESV
Trigger: TACAGACTCAGTTGTGGTTCACAAATTGCGTTCCAA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAGTATCCACCTTGAGTaGTTAGCTCAAAATTGTATT +
Preference number: 2 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVSIHLE*LAQNCI
Trigger: AATACAATTTTGAGCTAAGCACTCAAGGTGGATACT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAATGTACATTCTTGCTCTaGACTGTATGTGTGAGCTAT +
Preference number: 2 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAECTFLL*TVCVSY
Trigger: ATAGCTCACACATACAGTGCAGAGCAAGAATGTACA...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCTCTCAAAGTATGGTTaGCATTTCCCCAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESLSKYG*HFPKFG
Trigger: ACCAAATTTGGGGAAATGCCAACCATACTTTGAGAG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTTTCAGTGTGAGCAATaGAGAGGTCTTTTGATGAAT +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESFQCEQ*RGLLMN
Trigger: ATTCATCAAAAGACCTCTTCATTGCTCACACTGAAA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCCTTATTGTCTCATTTaGCATTCCAATCATCCATTC +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESPYCLI*HSNHPF
Trigger: GAATGGATGATTGGAATGGCAAATGAGACAATAAGG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTGCACCAGATCATGAATaGGTATTTCAGTTTTGTACT +
Preference number: 2 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESAPDHE*VFQFCT
Trigger: AGTACAAAACTGAAATACCCATTCATGATCTGGTGC...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATAAAAATTCAAAACAGTaGATGCAGACTGGAGGAGTA +
Preference number: 2 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNKNSKQ*MQTGGV
Trigger: TACTCCTCCAGTCTGCATTCACTGTTTTGAATTTTT...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR GCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATGCAAGTAGGCACAACTaGTCATATTTATTCTCTCAA +
Preference number: 2 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNASRHN*SYLFSQ
Trigger: TTGAGAGAATAAATATGAGCAGTTGTGCCTACTTGC...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp CACCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTaGCAGGCCAGGCAGGGCACCCTGCCAACCCCAGCA +
Preference number: 3 (lower is better)
Translates to: HPLPGGIPVESY*QARQGTLPTPA
Trigger: TGCTGGGGTTGGCAGGGTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp TCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTaGACTCCACCCTCTCCCAGGTGGCATCCCGGTGGA +
Preference number: 3 (lower is better)
Translates to: SGPRLWLLPLRQ*TPPSPRWHPGG
Trigger: TCCACCGGGATGCCACCTGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCAGTGGCTCTTAAGGCCTaGGCTTGGAGCTGCCCCATC +
Preference number: 3 (lower is better)
Translates to: LALASGYCLSGSGLHPLPVALKA*AWSCPI
Trigger: GATGGGGCAGCTCCAAGCCAAGGCCTTAAGAGCCAC...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 72 bp TTTGCCTGCACAATCAGGCCTCCTCTGCCTGCCATGTaGCTGGTCGGCCTGGTACCAGTCCCTGATGCAGGA +
Preference number: 3 (lower is better)
Translates to: FACTIRPPLPAM*LVGLVPVPDAG
Trigger: TCCTGCATCAGGGACTGGTACCAGGCCGACCAGGCACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp TCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCCGGGGTTTCAATATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: SGPRLWLLPLRQWTPPSPRGFNM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATATTGAAACCCCG...GGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 72 bp GTCAATTGTGCTTTGCCTGCACAATCAGGCCTCCTCTaGCTGCCATGTGCCTGGTCGGCCTGGTACCAGTCC +
Preference number: 3 (lower is better)
Translates to: VNCALPAQSGLL*LPCAWSAWYQS
Trigger: GGACTGGTACCAGGCCGACCAGGCACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp TGGCTGTTGACCCCTAAAGCCCATGCCCTTCCATCATaGATGCTGCCCCAGCCAAGCTGCTACCGGCCTTTG +
Preference number: 3 (lower is better)
Translates to: WLLTPKAHALPS*MLPQPSCYRPL
Trigger: CAAAGGCCGGTAGCAGCTTGGCTGGGGCAGCATGCATGATGGAAGGGCATGGGCTTTAGGGGTCAACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 72 bp GTGTTTCAGGACAATCTGGCCCTCGCCTCTGGCTATTaGCTCTCAGGCAGTGGACTCCACCCTCTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: VFQDNLALASGY*LSGSGLHPLPG
Trigger: ACCTGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGATTGTCCTGAAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp CCAATGAGAACTGGGCCAAAGGCCCCCATGGAGGCGTaGGGAAGGCACATCTGCAAAACAGGGCACATGTGG +
Preference number: 3 (lower is better)
Translates to: PMRTGPKAPMEA*GRHICKTGHMW
Trigger: CCACATGTGCCCTGTTTTGCAGATGTGCCTTCCCCACGCCTCCATGGGGGCCTTTGGCCCAGTTCTCATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 72 bp GGTTCTGCCTGGGCATCTACCCAGGGGAGTTGTATCTaGGGGCCGAGTCCTCTCAGTGCCTCATGGATCACA +
Preference number: 3 (lower is better)
Translates to: GSAWASTQGSCI*GPSPLSASWIT
Trigger: TGTGATCCATGAGGCACTGAGAGGACTCGGCCCTCAGATACAACTCCCCTGGGTAGATGCCCAGGCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp TGTAGGGGTGTTTCAGGACAATCTGGCCCTCGCCTCTaGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCT +
Preference number: 3 (lower is better)
Translates to: CRGVSGQSGPRL*LLPLRQWTPPS
Trigger: AGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGATTGTCCTGAAACACCCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGCAGGTGAGACTGGTTTaGAGGGCACAGAAACGTAGC +
Preference number: 3 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQQVRLV*RAQKRS
Trigger: GCTACGTTTCTGTGCCCTCAAAACCAGTCTCACCTG...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CCAATGGCTGAGATGAGGCATAGGGCCAAGCCCATCAGCAACAGCATAGGGAGCACTCAGTTACTGGCTTaGCTCCCACTGCCCATGTGG +
Preference number: 3 (lower is better)
Translates to: PMAEMRHRAKPISNSIGSTQLLA*LPLPMW
Trigger: CCACATGGGCAGTGGGAGCAAAGCCAGTAACTGAGT...GCTCCCTATGCTGTTGCTGATGGGCTTGGCCCTATGCCTCATCTCAGCCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATAGCTGCTACCGGCCTTaGAGCACTTCCTGTGCCAGG +
Preference number: 3 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHSCYRP*STSCAR
Trigger: CCTGGCACAGGAAGTGCTCAAAGGCCGGTAGCAGCT...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 72 bp GTACCCTCAGCCCTCTGTCCTGGTCTGTTACAACTTTaGGTACACTGCAGCCTCAGGGTGAGGCTCAAGGCC +
Preference number: 3 (lower is better)
Translates to: VPSALCPGLLQL*VHCSLRVRLKA
Trigger: GGCCTTGAGCCTCACCCTGAGGCTGCAGTGTACTCAAAGTTGTAACAGACCAGGACAGAGGGCTGAGGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 72 bp TGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTaGCCTCATCCTGTTCCTGGTAGCACTGCTGGCTCG +
Preference number: 3 (lower is better)
Translates to: WSLQFLDYCRGC*PHPVPGSTAGS
Trigger: CGAGCCAGCAGTGCTACCAGGAACAGGATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp TACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTaGAGGTCCAGCTGGGTGTGTAGAAGGGGTATTCTG +
Preference number: 3 (lower is better)
Translates to: YLGRDGESCEHR*RSSWVCRRGIL
Trigger: CAGAATACCCCTTCTACACACCCAGCTGGACCTCCACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATAAGGTCGTGTGGCTGTaGACCCCTAAAGCCCATGCC +
Preference number: 3 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHKVVWL*TPKAHA
Trigger: GGCATGGGCTTTAGGGGTCAACAGCCACACGACCTT...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 72 bp TGCAGGTGGGCACTTATTACTCCAGCCAAGTGGTTCTaGGAAGGGCAGTGTGGACTACAGAGCAGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: CRWALITPAKWF*EGQCGLQSSWQ
Trigger: CTGCCAGCTGCTCTGTAGTCCACACTGCCCTTCTCAGAACCACTTGGCTGGAGTAATAAGTGCCCACCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp CTGTGGGTTGGGGCCACTCTGCATCAGGCTGTGGGTTaGTTTCAGGGCTGTTCTCTGACTCCTTGTTCTTGG +
Preference number: 3 (lower is better)
Translates to: LWVGATLHQAVG*FQGCSLTPCSW
Trigger: CCAAGAACAAGGAGTCAGAGAACAGCCCTGAAATCAACCCACAGCCTGATGCAGAGTGGCCCCAACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR GCA 72 bp TTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTaGTGCCCTCATCCTGTTCCTGGTAGCACTGCTGGC +
Preference number: 3 (lower is better)
Translates to: FWSLQFLDYCRG*CPHPVPGSTAG
Trigger: GCCAGCAGTGCTACCAGGAACAGGATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGAACCCTCACCTGCACTaGATTCTATTGTCAGCTTGC +
Preference number: 3 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQNPHLH*ILLSAC
Trigger: GCAAGCTGACAATAGAATCAAGTGCAGGTGAGGGTT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGGTTAATTCAGCAGCATaGAGTTCACTGAGCCACCTG +
Preference number: 3 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQVNSAA*SSLSHL
Trigger: CAGGTGGCTCAGTGAACTCAATGCTGCTGAATTAAC...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp GGGCTTATCCATCACTGCCCAGTTGATAAGGCAGCCTaGAGCCCCTCTCTTGATGGTGAATGCCCAGATCCA +
Preference number: 3 (lower is better)
Translates to: GLIHHCPVDKAA*SPSLDGECPDP
Trigger: TGGATCTGGGCATTCACCATCAAGAGAGGGGCTTCAGGCTGCCTTATCAACTGGGCAGTGATGGATAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp CCAGGGGAGTTGTATCTGAGGGCCGAGTCCTCTCAGTaGCTCATGGATCACAATGTAGACAATCCACGTGCT +
Preference number: 3 (lower is better)
Translates to: PGELYLRAESSQ*LMDHNVDNPRA
Trigger: AGCACGTGGATTGTCTACATTGTGATCCATGAGGCACTGAGAGGACTCGGCCCTCAGATACAACTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp CCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTaGTCTGACCCTTGCACACCTTTCCAGATGAGTTTC +
Preference number: 3 (lower is better)
Translates to: PTCLFLALSTSL*SDPCTPFQMSF
Trigger: GAAACTCATCTGGAAAGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp AGAACCTTGTGGGTGGAAGGCAGTGACATTCCGAGTTaGACTCTGAGGGCCAAGTGGGGCTTTATTAGGCTG +
Preference number: 3 (lower is better)
Translates to: RTLWVEGSDIPS*TLRAKWGFIRL
Trigger: CAGCCTAATAAAGCCCCACTTGGCCCTCAGAGTCCAACTCGGAATGTCACTGCCTTCCACCCACAAGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp TGTGGGTTTGATTCTGGGCAGCCACTTGTAGGGGAGTaGAGGATGGGTGGAGTTGGCCTGCTAGAATCTTCT +
Preference number: 3 (lower is better)
Translates to: CGFDSGQPLVGE*RMGGVGLLESS
Trigger: AGAAGATTCTAGCAGGCCAACTCCACCCATCCTCCACTCCCCTACAAGTGGCTGCCCAGAATCAAACCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp GGGCTAGAAGGAAGAAAGTGGTGGCTCTTAAGGCCTTaGCTTGGAGCTGCCCCATCTTACTCCCACCCATAT +
Preference number: 3 (lower is better)
Translates to: GLEGRKWWLLRP*LGAAPSYSHPY
Trigger: ATATGGGTGGGAGTAAGATGGGGCAGCTCCAAGCCAAGGCCTTAAGAGCCACCACTTTCTTCCTTCTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTTGTTTGAAGGTATTTaGCCTGCAGGTGAGACTGGT +
Preference number: 3 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQLFEGI*PAGETG
Trigger: ACCAGTCTCACCTGCAGGCAAAATACCTTCAAACAA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGAGATGCATATACATTaGCTGGGTTCTGCCTGGGCA +
Preference number: 3 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIEMHIH*LGSAWA
Trigger: TGCCCAGGCAGAACCCAGCAAATGTATATGCATCTC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp CACCCGAGGCCATACGGCTGGTTTGTGGTGGAGCTGTaGTTTGACTCTGGATGTCTAGTTCCAAAGTCAGTG +
Preference number: 3 (lower is better)
Translates to: HPRPYGWFVVEL*FDSGCLVPKSV
Trigger: CACTGACTTTGGAACTAGACATCCAGAGTCAAATCACAGCTCCACCACAAACCAGCCGTATGGCCTCGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp ACAAACATCACCTCACTGAACCCTCATAACAACCTATaGGGTGGGTTCCACACCTCACCCGAGGCCATACGG +
Preference number: 3 (lower is better)
Translates to: TNITSLNPHNNL*GGFHTSPEAIR
Trigger: CCGTATGGCCTCGGGTGAGGTGTGGAACCCACCTCATAGGTTGTTATGAGGGTTCAGTGAGGTGATGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp TCAGAGCCCAGAGATGCATATACATTTGCTGGGTTCTaGCTGGGCATCTACCCAGGGGAGTTGTATCTGAGG +
Preference number: 3 (lower is better)
Translates to: SEPRDAYTFAGF*LGIYPGELYLR
Trigger: CCTCAGATACAACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGTATATGCATCTCTGGGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp AAGAAAGTGGTGGCTCTTAAGGCCTTGGCTTGGAGCTaGCCCATCTTACTCCCACCCATATTCCAATGGCTG +
Preference number: 3 (lower is better)
Translates to: KKVVALKALAWS*PILLPPIFQWL
Trigger: CAGCCATTGGAATATGGGTGGGAGTAAGATGGGGCAGCTCCAAGCCAAGGCCTTAAGAGCCACCACTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp GGGCATTACCTCATTCATGTCAGACGTCAGGCATCCTaGGGCTTATCCATCACTGCCCAGTTGATAAGGCAG +
Preference number: 3 (lower is better)
Translates to: GHYLIHVRRQAS*GLSITAQLIRQ
Trigger: CTGCCTTATCAACTGGGCAGTGATGGATAAGCCCCAGGATGCCTGACGTCTGACATGAATGAGGTAATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp GGCTTGGAGATGCTAAGAAATGTGGCAAAGGTCGTGTaGCTGTTGACCCCTAAAGCCCATGCCCTTCCATCA +
Preference number: 3 (lower is better)
Translates to: GLEMLRNVAKVV*LLTPKAHALPS
Trigger: TGATGGAAGGGCATGGGCTTTAGGGGTCAACAGCCACACGACCTTTGCCACATTTCTTAGCATCTCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGAAGACTCTGGATTGTTaGAAGGTATTTTGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQKTLDC*KVFCLQ
Trigger: CTGCAGGCAAAATACCTTCAAACAATCCAGAGTCTT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGATCTACCCAGGGGAGTaGTATCTGAGGGCCGAGTCC +
Preference number: 3 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQIYPGE*YLRAES
Trigger: GGACTCGGCCCTCAGATACAACTCCCCTGGGTAGAT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAGACTCACCATGGGCTaGGTAAGGAGCCTGCCATCC +
Preference number: 3 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQRLTMG*VRSLPS
Trigger: GGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAAAGGGTATGAGCTCTaGCTGCAAGGAGTAGATGAA +
Preference number: 3 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIKGYEL*LQGVDE
Trigger: TTCATCTACTCCTTGCAGCAAGAGCTCATACCCTTT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GGGCACATGTGGCCTTTTGTTCCTTCTGGGGAGAATGTGAATGCTGGACTCCTGGTGATGAGTGTTCCCTaGATGAGAGTACTTAGGCAG +
Preference number: 3 (lower is better)
Translates to: GHMWPFVPSGENVNAGLLVMSVP*MRVLRQ
Trigger: CTGCCTAAGTACTCTCATCAAGGGAACACTCATCAC...CAGGAGTCCAGCATTCACATTCTCCCCAGAAGGAACAAAAGGCCACATGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp GTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGTCATCAGCAATCATaGGCAGATTATGTGCCGAAC +
Preference number: 3 (lower is better)
Translates to: VTTSLFWSLQFLDYCRGCCHQQS*ADYVPN
Trigger: GTTCGGCACATAATCTGCCAATGATTGCTGATGACA...GCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 72 bp CTAGAATGTCCAGAAAGCACCTCCTCAGGGCAGCCCTaGAAGTGCCCTTTACTCTCAAGGCATTTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: LECPESTSSGQP*KCPLLSRHFVL
Trigger: GAGGACAAAATGCCTTGAGAGTAAAGGGCACTTTCAGGGCTGCCCTGAGGAGGTGCTTTCTGGACATTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp TTTGACACCTATTACCTGTGTCAATTGTGCTTTGCCTaGACAATCAGGCCTCCTCTGCCTGCCATGTGCCTG +
Preference number: 3 (lower is better)
Translates to: FDTYYLCQLCFA*TIRPPLPAMCL
Trigger: CAGGCACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGACACAGGTAATAGGTGTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp GCTGTTCAGTTTGACACCTATTACCTGTGTCAATTGTaGTTTGCCTGCACAATCAGGCCTCCTCTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: AVQFDTYYLCQL*FACTIRPPLPA
Trigger: GGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGACACAGGTAATAGGTGTCAAACTGAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp TCTGTCCTTCTCCCCCAGGTCCTAGCTCGCTCACTCTaGGCCTCATTTGCCTTCTTGCTTTTCCTTGATTAT +
Preference number: 3 (lower is better)
Translates to: SVLLPQVLARSL*ASFAFLLFLDY
Trigger: ATAATCAAGGAAAAGCAAGAAGGCAAATGAGGCGCAGAGTGAGCGAGCTAGGACCTGGGGGAGAAGGACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563404.1
3UTR CCA 72 bp TTTGTCCTCAGAGCCCAGAGATGCATATACATTTGCTaGGTTCTGCCTGGGCATCTACCCAGGGGAGTTGTA +
Preference number: 3 (lower is better)
Translates to: FVLRAQRCIYIC*VLPGHLPRGVV
Trigger: TACAACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGTATATGCATCTCTGGGCTCTGAGGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp TCCTCTGCCTTATTCTCCTGTATCCTTCAGAACAGATaGCCGCATACCCACTTCACTCTTGCCAGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: SSALFSCILQNR*PHTHFTLASPF
Trigger: GAAAGGGCTGGCAAGAGTGAAGTGGGTATGCGGCCATCTGTTCTGAAGGATACAGGAGAATAAGGCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp AAGACTGTATGTAGTACGAGGTGCTGGAGAACCTTGTaGGTGGAAGGCAGTGACATTCCGAGTTGGACTCTG +
Preference number: 3 (lower is better)
Translates to: KTVCSTRCWRTL*VEGSDIPSWTL
Trigger: CAGAGTCCAACTCGGAATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCTCGTACTACATACAGTCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp CCTACAGCACAAAAGACTGTATGTAGTACGAGGTGCTaGAGAACCTTGTGGGTGGAAGGCAGTGACATTCCG +
Preference number: 3 (lower is better)
Translates to: PTAQKTVCSTRC*RTLWVEGSDIP
Trigger: CGGAATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCTCGTACTACATACAGTCTTTTGTGCTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGCTTTGTAGACCCTTTTaGTATTTTGACAGTCACAAG +
Preference number: 3 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQLCRPF*YFDSHK
Trigger: CTTGTGACTGTCAAAATACAAAAAGGGTCTACAAAG...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CTGGAGGCTTCACAGCGCCCTCTGGGAGTTCATCAATCTGAATTCATCTTCTGTCACTCTGCGCCTCATTaGCCTTCTTGCTTTTCCTTG +
Preference number: 3 (lower is better)
Translates to: LEASQRPLGVHQSEFIFCHSAPH*PSCFSL
Trigger: CAAGGAAAAGCAAGAAGGCAAATGAGGCGCAGAGTG...ACAGAAGATGAATTCAGATTGATGAACTCCCAGAGGGCGCTGTGAAGCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563404.1
3UTR-3UTR CAA 90 bp CCGGCTTCCCTTCTCTGTGAATTAACCATCCCCACACTCCTCTCCATTTCTTTTATGTGGGATGTGGGTTaGATTCTGGGCAGCCACTTG +
Preference number: 3 (lower is better)
Translates to: PASLLCELTIPTLLSISFMWDVG*ILGSHL
Trigger: CAAGTGGCTGCCCAGAATCAAACCCACATCCCACAT...AAAAGAAATGGAGAGGAGTGTGGGGATGGTTAATTCACAGAGAAGGGAAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR TCA 72 bp GAGGCCATACGGCTGGTTTGTGGTGGAGCTGTGATTTaGCTCTGGATGTCTAGTTCCAAAGTCAGTGTTCTG +
Preference number: 3 (lower is better)
Translates to: EAIRLVCGGAVI*LWMSSSKVSVL
Trigger: CAGAACACTGACTTTGGAACTAGACATCCAGAGTCAAATCACAGCTCCACCACAAACCAGCCGTATGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp AAACAGCAGGAAAACCTAGGCAAAAGCCTAGTCACATaGCCAGGGTCAACAGTCAGGAAGCTTAGGAAGGTC +
Preference number: 3 (lower is better)
Translates to: KQQENLGKSLVT*PGSTVRKLRKV
Trigger: GACCTTCCTAAGCTTCCTGACTGTTGACCCTGGCCATGTGACTAGGCTTTTGCCTAGGTTTTCCTGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp AGTCCTACAGCACAAAAGACTGTATGTAGTACGAGGTaGTGGAGAACCTTGTGGGTGGAAGGCAGTGACATT +
Preference number: 3 (lower is better)
Translates to: SPTAQKTVCSTR*WRTLWVEGSDI
Trigger: AATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCTCGTACTACATACAGTCTTTTGTGCTGTAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp TTCAGTCAGGTGCTGCCCTCAGACTCTCTAACTCCCTaGCTATGTAGGTGCTATGTCATGTCTTTTTCTCAC +
Preference number: 3 (lower is better)
Translates to: FSQVLPSDSLTP*LCRCYVMSFSH
Trigger: GTGAGAAAAAGACATGACATAGCACCTACATAGCCAGGGAGTTAGAGAGTCTGAGGGCAGCACCTGACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATACTCTCAAGGCATTTaGTCCTCAGAGCCCAGAGAT +
Preference number: 3 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSYSQGI*SSEPRD
Trigger: ATCTCTGGGCTCTGAGGACAAAATGCCTTGAGAGTA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTCAGATTCTAGCCTGTaGCTGATGAGCACAATGACC +
Preference number: 3 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQSDSSL*LMSTMT
Trigger: GGTCATTGTGCTCATCAGCAACAGGCTAGAATCTGA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTTGGTGAAGCTAAGCTaGCAGGTGGGCACTTATTAC +
Preference number: 3 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQLVKLS*QVGTYY
Trigger: GTAATAAGTGCCCACCTGCAAGCTTAGCTTCACCAA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp TGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGAGAAAGCCATTGTCACTaGCACATCAGCCACCTGTCT +
Preference number: 3 (lower is better)
Translates to: CVYFDSDHLPVLVVAVPGESHCH*HISHLS
Trigger: AGACAGGTGGCTGATGTGCAAGTGACAATGGCTTTC...TCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGTAGTTATTGGGGCCTaGATTTCAGACCATGTAGGA +
Preference number: 3 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQVVIGA*ISDHVG
Trigger: TCCTACATGGTCTGAAATCAAGGCCCCAATAACTAC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTCCATCACTGCCCAGTaGATAAGGCAGCCTGAAGCC +
Preference number: 3 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFISITAQ*IRQPEA
Trigger: GGCTTCAGGCTGCCTTATCAACTGGGCAGTGATGGA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp TTACTCTCAAGGCATTTTGTCCTCAGAGCCCAGAGATaGATATACATTTGCTGGGTTCTGCCTGGGCATCTA +
Preference number: 3 (lower is better)
Translates to: LLSRHFVLRAQR*IYICWVLPGHL
Trigger: TAGATGCCCAGGCAGAACCCAGCAAATGTATATGCATCTCTGGGCTCTGAGGACAAAATGCCTTGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp AGTACATCCATTAGGACTATGAGCAGTACTGGGAGCTaGACACCACTGGCCTTAGAGTTCTTCTCTCACATA +
Preference number: 3 (lower is better)
Translates to: STSIRTMSSTGS*TPLALEFFSHI
Trigger: TATGTGAGAGAAGAACTCTAAGGCCAGTGGTGTGCAGCTCCCAGTACTGCTCATAGTCCTAATGGATGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCTGCACTTGATTCTATaGTCAGCTTGCTGTGAACAA +
Preference number: 3 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQLHLIL*SACCEQ
Trigger: TTGTTCACAGCAAGCTGACAATAGAATCAAGTGCAG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp ACTTGTGTTGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCCACTTCTATGCTTCCTaGGCCACTCAGTTACTGGCT +
Preference number: 3 (lower is better)
Translates to: TCVVISNHWQIMCRTLPFHFYAS*ATQLLA
Trigger: AGCCAGTAACTGAGTGGCCAAGGAAGCATAGAAGTG...GAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACAACACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp ATCATTGGCAGATTATGTGCCGAACACTTCCTTTCTTaGAGACATATGATGGCTAATCACCTGGGAGGCTTC +
Preference number: 3 (lower is better)
Translates to: IIGRLCAEHFLS*RHMMANHLGGF
Trigger: GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp AATGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTaGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: NVFILIVTTSLF*SLQFLDYCRGC
Trigger: GCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATGCCTGCATGTACATTaGCCATTTTACAAAGAGCAA +
Preference number: 3 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSCLHVH*PFYKEQ
Trigger: TTGCTCTTTGTAAAATGGCAAATGTACATGCAGGCA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAGACCCTTTTTGTATTTaGACAGTCACAAGTCCATTG +
Preference number: 3 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSDPFCI*TVTSPL
Trigger: CAATGGACTTGTGACTGTCAAAATACAAAAAGGGTC...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAGGACTCAACCTCACATaGCTAAATTCTGGAGAAATT +
Preference number: 3 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSGLNLT*LNSGEI
Trigger: AATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCC...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp GTATCTATAAAGACAGAACCACCAAACCCAGATTTCTaGGAACCAGGGATCAAATGTGGCTTCCAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: VSIKTEPPNPDF*EPGIKCGFQSR
Trigger: TCTGGACTGGAAGCCACATTTGATCCCTGGTTCTCAGAAATCTGGGTTTGGTGGTTCTGTCTTTATAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp CAGAACTTAACTGTGTGGTGTCTGGGTCTGCACATATaGATGAAGAGGAAAATAATGGAACCTGCCATAGAG +
Preference number: 3 (lower is better)
Translates to: QNLTVWCLGLHI*MKRKIMEPAIE
Trigger: CTCTATGGCAGGTTCCATTATTTTCCTCTTCATGCATATGTGCAGACCCAGACACCACACAGTTAAGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CCA 72 bp ACCAAAAATACAAACAGCCACCTCCTCACTGTGCCCTaGAATGATAAATGGACTGGTGCTTTCATACCCTTA +
Preference number: 3 (lower is better)
Translates to: TKNTNSHLLTVP*NDKWTGAFIPL
Trigger: TAAGGGTATGAAAGCACCAGTCCATTTATCATTCCAGGGCACAGTGAGGAGGTGGCTGTTTGTATTTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp ACAGTGTCTGACACTTGTGTTGTCATCAGCAATCATTaGCAGATTATGTGCCGAACACTTCCTTTCTTGGAG +
Preference number: 3 (lower is better)
Translates to: TVSDTCVVISNH*QIMCRTLPFLE
Trigger: CTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACAACACAAGTGTCAGACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGTTCTTCCTCAGCTCTaGGCCTATCGTTGTATCTAC +
Preference number: 3 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIVLPQL*AYRCIY
Trigger: GTAGATACAACGATAGGCCAAGAGCTGAGGAAGAAC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAATAGCCCCAAGTGCTaGACACTGTCTAAGCATGTC +
Preference number: 3 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVNSPKC*TLSKHV
Trigger: GACATGCTTAGACAGTGTCAAGCACTTGGGGCTATT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp TTTTGTACTTGTGTCTACAGAATAGCCCCAAGTGCTTaGCACTGTCTAAGCATGTCACAAACATCACCTCAC +
Preference number: 3 (lower is better)
Translates to: FCTCVYRIAPSA*HCLSMSQTSPH
Trigger: GTGAGGTGATGTTTGTGACATGCTTAGACAGTGTCAAGCACTTGGGGCTATTCTGTAGACACAAGTACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp AAGGGCCCAGATTTTCTACAGTCGAGCACCAGATCATaGATGGGTATTTCAGTTTTGTACTTGTGTCTACAG +
Preference number: 3 (lower is better)
Translates to: KGPDFLQSSTRS*MGISVLYLCLQ
Trigger: CTGTAGACACAAGTACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp CTGACATTAAAGACTCTGGATTGTTTGAAGGTATTTTaGCTGCAGGTGAGACTGGTTTTGAGGGCACAGAAA +
Preference number: 3 (lower is better)
Translates to: LTLKTLDCLKVF*LQVRLVLRAQK
Trigger: TTTCTGTGCCCTCAAAACCAGTCTCACCTGCAGGCAAAATACCTTCAAACAATCCAGAGTCTTTAATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp TCAGTTTTGTACTTGTGTCTACAGAATAGCCCCAAGTaGTTGACACTGTCTAAGCATGTCACAAACATCACC +
Preference number: 3 (lower is better)
Translates to: SVLYLCLQNSPK*LTLSKHVTNIT
Trigger: GGTGATGTTTGTGACATGCTTAGACAGTGTCAAGCACTTGGGGCTATTCTGTAGACACAAGTACAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTACTACCTCCACCCAAGTaGGTAACAACCTTATCTTAC +
Preference number: 3 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVLPPPK*VTTLSY
Trigger: GTAAGATAAGGTTGTTACCAACTTGGGTGGAGGTAG...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp TCTGCGCTTTCTTCATTTTTATTGGAACGCAATTTGTaGACCACAACTGAGTCTGTATGCAGGATCTCCAGA +
Preference number: 3 (lower is better)
Translates to: SALSSFLLERNL*TTTESVCRISR
Trigger: TCTGGAGATCCTGCATACAGACTCAGTTGTGGTTCACAAATTGCGTTCCAATAAAAATGAAGAAAGCGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp CCCTACACTAGTCTGAGCTCTCATTACCTTACTTCATaGCAGGCAAACCACGTTAAAAGTTTTACTTACCTA +
Preference number: 3 (lower is better)
Translates to: PYTSLSSHYLTS*QANHVKSFTYL
Trigger: TAGGTAAGTAAAACTTTTAACGTGGTTTGCCTGGCATGAAGTAAGGTAATGAGAGCTCAGACTAGTGTAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTATATTTAACTGAGTGTTaGATGATGGTGGGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVYLTEC*MMVGSR
Trigger: CCTTGACCCCACCATCATCAAACACTCAGTTAAATA...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTTTCCCATAGGGCTGTaGCTGATTCCAGCTTTAAAA +
Preference number: 3 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIFPIGL*LIPALK
Trigger: TTTTAAAGCTGGAATCAGCAACAGCCCTATGGGAAA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTCTCTCAAAGTATGGTaGGCATTTCCCCAAATTTGG +
Preference number: 3 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFISLKVW*AFPQIW
Trigger: CCAAATTTGGGGAAATGCCAACCATACTTTGAGAGA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAATGTTGCCATGAGTTaGCTGTTCATGAAAGTGAGG +
Preference number: 3 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVNVAMS*LFMKVR
Trigger: CCTCACTTTCATGAACAGCAAACTCATGGCAACATT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAGAATATGTACATTCTaGCTCTGCACTGTATGTGTG +
Preference number: 3 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVRICTF*LCTVCV
Trigger: CACACATACAGTGCAGAGCAAGAATGTACATATTCT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTACTGGTACTGATATTTaGTCCCATTTCACTCTCTTC +
Preference number: 3 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFITGTDI*SHFTLF
Trigger: GAAGAGAGTGAAATGGGACAAAATATCAGTACCAGT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTCCACGTGCTGGTCCTaGGCAATACATCATGCTAAT +
Preference number: 3 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNSTCWS*AIHHAN
Trigger: ATTAGCATGATGTATTGCCAAGGACCAGCACGTGGA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp TTCATTTTTATTGGAACGCAATTTGTGAACCACAACTaGGTCTGTATGCAGGATCTCCAGAACGCAAATCAG +
Preference number: 3 (lower is better)
Translates to: FIFIGTQFVNHN*VCMQDLQNANQ
Trigger: CTGATTTGCGTTCTGGAGATCCTGCATACAGACTCAGTTGTGGTTCACAAATTGCGTTCCAATAAAAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp ATGAGGAGGCTGAGGCTCAGTCCACCTGAAATTATTTaGCTAAGATTACAGTTATTAAATGGCAGAATAGGT +
Preference number: 3 (lower is better)
Translates to: MRRLRLSPPEII*LRLQLLNGRIG
Trigger: ACCTATTCTGCCATTTAATAACTGTAATCTTAGGCAAATAATTTCAGGTGGACTGAGCCTCAGCCTCCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp TACTGTATTAGCAAAAGACCCTGGCTATCATCCCAATaGTCACCTAAGTTTTCTGCCTATAACATTCACATG +
Preference number: 3 (lower is better)
Translates to: YCISKRPWLSSQ*SPKFSAYNIHM
Trigger: CATGTGAATGTTATAGGCAGAAAACTTAGGTGACCATTGGGATGATAGCCAGGGTCTTTTGCTAATACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp GCCCAGATTTTCTACAGTCGAGCACCAGATCATGAATaGGTATTTCAGTTTTGTACTTGTGTCTACAGAATA +
Preference number: 3 (lower is better)
Translates to: AQIFYSRAPDHE*VFQFCTCVYRI
Trigger: TATTCTGTAGACACAAGTACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTACAAGCATTAACAGGATaGATAAAACCCAAACTGACT +
Preference number: 3 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVQALTG*IKPKLT
Trigger: AGTCAGTTTGGGTTTTATCAATCCTGTTAATGCTTG...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATGCTCTTGGCCTATCGTaGTATCTACAAACCAGAGTT +
Preference number: 3 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNALGLS*YLQTRV
Trigger: AACTCTGGTTTGTAGATACAACGATAGGCCAAGAGC...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAACCTTATTGTCTCATTaGCCATTCCAATCATCCATT +
Preference number: 3 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVTLLSH*PFQSSI
Trigger: AATGGATGATTGGAATGGCAAATGAGACAATAAGGT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp TGCTGGTTGTTTTTCCTTTGCAGACCTCTAAATACCTaGTTCCTCAGTCCTTGGGGTTTATTTCTGTATTTT +
Preference number: 3 (lower is better)
Translates to: CWLFFLCRPLNT*FLSPWGLFLYF
Trigger: AAAATACAGAAATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAACAACCAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATCTCAGTTTTCTCACATaGGTGCATCTCTTCATGCTA +
Preference number: 3 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNLSFLT*VHLFML
Trigger: TAGCATGAAGAGATGCACCAATGTGAGAAAACTGAG...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTTATTAGCTATGTGCTaGGGAAGAGAAACCTCCTCA +
Preference number: 3 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNLLAMC*GRETSS
Trigger: TGAGGAGGTTTCTCTTCCCAAGCACATAGCTAATAA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp CTGATATTTTGTCCCATTTCACTCTCTTCTCATACGTaGGTACTTAAGAATATGTACATTCTTGCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: LIFCPISLSSHT*VLKNMYILALH
Trigger: GTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACGTATGAGAAGAGAGTGAAATGGGACAAAATATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR TCA 72 bp CAATTTAAAGATGAGGAGGCTGAGGCTCAGTCCACCTaGAATTATTTGCCTAAGATTACAGTTATTAAATGG +
Preference number: 3 (lower is better)
Translates to: QFKDEEAEAQST*NYLPKITVIKW
Trigger: CCATTTAATAACTGTAATCTTAGGCAAATAATTTCAGGTGGACTGAGCCTCAGCCTCCTCATCTTTAAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATGTGCTTAGCTCAAAATaGTATTGGCACTGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNVLSSK*YWHWEK
Trigger: TTTTTCCCAGTGCCAATACAATTTTGAGCTAAGCAC...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR GCA 72 bp ATACGTGAGTACTTAAGAATATGTACATTCTTGCTCTaGACTGTATGTGTGAGCTATATGGTATTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: IREYLRICTFLL*TVCVSYMVLCK
Trigger: TTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACGTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CCA 72 bp ATTTGTTTTGTACTTAGCAAATACTCGCTTATGAAATaGAGTCTCATCTTATGGGAGTATCTGACACATTCA +
Preference number: 3 (lower is better)
Translates to: ICFVLSKYSLMK*SLILWEYLTHS
Trigger: TGAATGTGTCAGATACTCCCATAAGATGAGACTCCATTTCATAAGCGAGTATTTGCTAAGTACAAAACAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACCCAGGCAGGGCACCCTaGCAACCCCAGCATGCTTTG +
Preference number: 4 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHPGRAP*QPQHAL
Trigger: CAAAGCATGCTGGGGTTGGCAGGGTGCCCTGCCTGG...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACGCTGCTACCGGCCTTTaGGCACTTCCTGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHAATGL*ALPVPG
Trigger: ACCTGGCACAGGAAGTGCTCAAAGGCCGGTAGCAGC...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGCCTCATGCCGCCGCTaGCGGTCTCCCTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIASCRR*RSPSRA
Trigger: AGCCCGGGAGGGAGACCGGCAGCGGCGGCATGAGGC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACTGTGGGATGTGGGTTTaGTTCTGGGCAGCCACTTGT +
Preference number: 4 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHCGMWV*FWAATC
Trigger: ACAAGTGGCTGCCCAGAATCAAACCCACATCCCACA...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCACATGCCCTTCCATCATaGATGCTGCCCCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LALASGYCLSGSGLHPLPHALPS*MLPQPS
Trigger: GCTTGGCTGGGGCAGCATGCATGATGGAAGGGCATG...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCACTCGCCTCTGGCTATTaGCTCTCAGGCAGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LALASGYCLSGSGLHPLPLASGY*LSGSGL
Trigger: GAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAG...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCAAGCAGCTCCCAGGCATaGCCTTCTCATGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: LALASGYCLSGSGLHPLPSSSQA*PSHGRY
Trigger: GTATCTGCCATGAGAAGGGCATGCCTGGGAGCTGCT...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp GTTCCCTTGATGAGAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGTGGACTCCTGGCTGCTaGCTCCAGGCAAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VPLMRVLRQGWGELRTQVWTPGC*LQARPA
Trigger: AGCCGGCCTTGCCTGGAGTCAGCAGCCAGGAGTCCA...CACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTCTCATCAAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp GTTCCCTTGATGAGAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGCCGGTGGAGAGTTACTaGCAGGCCAGGCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: VPLMRVLRQGWGELRTQVPVESY*QARQGT
Trigger: GGTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGG...CACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTCTCATCAAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp TCCATCATGCATGCTGCCCCAGCCAAGCTGCTACCGGCCTTTGAGCACTTCCTGGCCCCCATGGAGGCGTaGGGAAGGCACATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SIMHAAPAKLLPAFEHFLAPMEA*GRHICK
Trigger: TTTGCAGATGTGCCTTCCCCACGCCTCCATGGGGGC...CAGGAAGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAGCATGCATGATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp GTTCCCTTGATGAGAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGGGCCAAAGGCCCCCATaGAGGCGTGGGGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: VPLMRVLRQGWGELRTQVGQRPP*RRGEGT
Trigger: TGTGCCTTCCCCACGCCTCCATGGGGGCCTTTGGCC...CACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTCTCATCAAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCTTGCCTCTCAGGCAGTaGACTCCACCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCLPLRQ*TPPSPR
Trigger: CCTGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAA...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGACTCTCCAGCCCAGGTaGCAGAGAGAGACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQTLQPR*QRETLS
Trigger: AGACAGGGTCTCTCTCTGTCACCTGGGCTGGAGAGT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGCGTCGCCTGCCTCATaGCGCCGCTGCCGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQASPAS*RRCRSP
Trigger: GGGAGACCGGCAGCGGCGGCATGAGGCAGGCGACGC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCAATGGCTGAGATGAGGCATAGGGCCAAGCCCATCAGCAACAGCATAGGGAGCAGGGATGGGGAGAGCTaGGAACACAGGTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PMAEMRHRAKPISNSIGSRDGES*EHRWRS
Trigger: GGACCTCCACCTGTGTTCGCAGCTCTCCCCATCCCT...GCTCCCTATGCTGTTGCTGATGGGCTTGGCCCTATGCCTCATCTCAGCCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCCCCTTCCATCATGCATaGTGCCCCAGCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCPFHHA*CPSQAA
Trigger: AGCAGCTTGGCTGGGGCAGCATGCATGATGGAAGGG...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp TCCATCATGCATGCTGCCCCAGCCAAGCTGCTACCGGCCTTTGAGCACTTCCTGGCATGCTTTGACCTCTaGCCTCTGACCTCGACTCTC +
Preference number: 4 (lower is better)
Translates to: SIMHAAPAKLLPAFEHFLACFDL*PLTSTL
Trigger: GAGAGTCGAGGTCAGAGGTCAGAGGTCAAAGCATGC...CAGGAAGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAGCATGCATGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CTCCGCCTCCTGGGTTCAAGCAATTCACTTGTCTCAGCCTCTGGAGTAGCTGGGGGGTTGGGGCCACTCTaGATCAGGCTGTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LRLLGSSNSLVSASGVAGGLGPL*IRLWVD
Trigger: ATCAACCCACAGCCTGATGCAGAGTGGCCCCAACCC...CCCAGCTACTCCAGAGGCTGAGACAAGTGAATTGCTTGAACCCAGGAGGCGGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCTTCCTGGTAGTCCTTaGTCGCCGCGAAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAILPGSP*SPRRCR
Trigger: CCGGCATCTTCGCGGCGACCAAGGACTACCAGGAAG...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCCTAGGATACGCCATGTaGAATAGGGTAACCACACTG +
Preference number: 4 (lower is better)
Translates to: SGPRLWLLPLRQWTPPSPLGYAM*NRVTTL
Trigger: CAGTGTGGTTACCCTATTCCACATGGCGTATCCTAG...GGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCAGCCTTTTGTTCCTTCTaGGGAGAATGTGAATGCTGG +
Preference number: 4 (lower is better)
Translates to: LALASGYCLSGSGLHPLPAFCSF*GECECW
Trigger: CCAGCATTCACATTCTCCCCAGAAGGAACAAAAGGC...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCACTGCCAATGAGAACTaGGCCAAAGGCCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCTANEN*AKGPHG
Trigger: TCCATGGGGGCCTTTGGCCCAGTTCTCATTGGCAGT...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp ACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCACACCTCACAGGTCTGTGGGTTaGGGCCACTCTGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: TCLFLALSTSLCSDPCTPHRSVG*GHSASG
Trigger: GCCTGATGCAGAGTGGCCCCAACCCACAGACCTGTG...AGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp ACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCACACCTCAGGTGGCATCCCGGTaGAGAGTTACTGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TCLFLALSTSLCSDPCTPQVASR*RVTARP
Trigger: TGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTG...AGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp GTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCCCACCCTCTCCCAGGTaGCATCCCGGTGGAGAGTTA +
Preference number: 4 (lower is better)
Translates to: VTTSLFWSLQFLDYCRGCPPSPR*HPGGEL
Trigger: TAACTCTCCACCGGGATGCCACCTGGGAGAGGGTGG...GCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp TTTGCTGGGTTCTGCCTGGGCATCTACCCAGGGGAGTaGTATCTGAGGGCCGAGTCCTCTCAGTGCCTCATG +
Preference number: 4 (lower is better)
Translates to: FAGFCLGIYPGE*YLRAESSQCLM
Trigger: CATGAGGCACTGAGAGGACTCGGCCCTCAGATACAACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGGAGGTCCAGCTGGGGTCTGTTACAACTTTaGGTACACTGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EYLGRDGESCEHRWRSSWGLLQL*VHCSLR
Trigger: CCTGAGGCTGCAGTGTACTCAAAGTTGTAACAGACC...CCAGCTGGACCTCCACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp CGTCAGGCATCCTGGGGCTTATCCATCACTGCCCAGTaGATAAGGCAGCCTGAAGCCCCTCTCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: RQASWGLSITAQ*IRQPEAPLLMV
Trigger: CACCATCAAGAGAGGGGCTTCAGGCTGCCTTATCAACTGGGCAGTGATGGATAAGCCCCAGGATGCCTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp GGCTGTGGGTTGATTTCAGGGCTGTTCTCTGACTCCTaGTTCTTGGACCAGCAGCTCCCAGGCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GCGLISGLFSDS*FLDQQLPGMPF
Trigger: GAAGGGCATGCCTGGGAGCTGCTGGTCCAAGAACAAGGAGTCAGAGAACAGCCCTGAAATCAACCCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCTCCTCAGGGCAGCCCTaGAAGTGCCCTTTACTCTCA +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAISSGQP*KCPLLS
Trigger: TGAGAGTAAAGGGCACTTTCAGGGCTGCCCTGAGGA...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGGACCATGTAGGAGTCTaGCAAATCTGCTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQDHVGV*QICCLQ
Trigger: CTGAAGGCAGCAGATTTGGCAGACTCCTACATGGTC...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGGTGTCAATTGTGCTTTaGCTGCACAATCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQVSIVL*LHNQAS
Trigger: GGAGGCCTGATTGTGCAGGCAAAGCACAATTGACAC...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCACATTGGCAGATTATGTaGCGAACACTTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LALASGYCLSGSGLHPLPHWQIM*RTLPFL
Trigger: CAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATG...TGGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CATGTGGGATGTGGGTTTGATTCTGGGCAGCCACTTGTAGGGGAGTGGAGGATGCTCTCCACTAGCCTGTaGTCTGACCCTTGCACACCT +
Preference number: 4 (lower is better)
Translates to: HVGCGFDSGQPLVGEWRMLSTSL*SDPCTP
Trigger: AGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAG...CATCCTCCACTCCCCTACAAGTGGCTGCCCAGAATCAAACCCACATCCCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CTCCGCCTCCTGGGTTCAAGCAATTCACTTGTCTCAGCCTCTGGAGTAGCTGGGTTTGAGCACTTCCTGTaGCAGGTACCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRLLGSSNSLVSASGVAGFEHFL*QVPCWA
Trigger: TGCCCAGCAAGGTACCTGGCACAGGAAGTGCTCAAA...CCCAGCTACTCCAGAGGCTGAGACAAGTGAATTGCTTGAACCCAGGAGGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp CAGGTCCTAGCTCGCTCACTCTGCGCCTCATTTGCCTTCTTGCTTTTCCTTGATCTTCCTGGTAGTCCTTaGTCGCCGCGAAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: QVLARSLCASFAFLLFLDLPGSP*SPRRCR
Trigger: CCGGCATCTTCGCGGCGACCAAGGACTACCAGGAAG...ATCAAGGAAAAGCAAGAAGGCAAATGAGGCGCAGAGTGAGCGAGCTAGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563404.1
CDS-3UTR CCA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCGAGGATGGGTGGAGTTaGCCTGCTAGAATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCEDGWS*PARIFC
Trigger: ACAGAAGATTCTAGCAGGCCAACTCCACCCATCCTC...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp CATGTGGGATGTGGGTTTGATTCTGGGCAGCCACTTGTAGGGGAGTGGAGGATGTGGCCACTCAGTTACTaGCTTTGCTCCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: HVGCGFDSGQPLVGEWRMWPLSY*LCSHCP
Trigger: TGGGCAGTGGGAGCAAAGCCAGTAACTGAGTGGCCA...CATCCTCCACTCCCCTACAAGTGGCTGCCCAGAATCAAACCCACATCCCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp GAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGGAGGTCCAGCTGGAAAACAGGGCACATGTaGCCTTTTGTTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EYLGRDGESCEHRWRSSWKTGHM*PFVPSG
Trigger: CCCAGAAGGAACAAAAGGCCACATGTGCCCTGTTTT...CCAGCTGGACCTCCACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp GGGTTGATTTCAGGGCTGTTCTCTGACTCCTTGTTCTaGGACCAGCAGCTCCCAGGCATGCCCTTCTCATGG +
Preference number: 4 (lower is better)
Translates to: GLISGLFSDSLF*DQQLPGMPFSW
Trigger: CCATGAGAAGGGCATGCCTGGGAGCTGCTGGTCCAAGAACAAGGAGTCAGAGAACAGCCCTGAAATCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGCAATGGAAGAAATATTaGGTAGTGGCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQQWKKY*VVARRS
Trigger: ACTGCGCCTGGCCACTACTCAATATTTCTTCCATTG...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTTGAAGTCAGGAGTTTaGAACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQLKSGV*NQPGQH
Trigger: ATGTTGCCCAGGCTGGTTTCAAACTCCTGACTTCAA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCTGGTACCAGTCCCTaGTGCAGGAATGCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIPGTSP*CRNAKC
Trigger: ACACTTAGCATTCCTGCATCAGGGACTGGTACCAGG...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGACCCCATGCAAACAATaGACTATGGCACAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQTPCKQ*TMAQSP
Trigger: AGGACTCTGTGCCATAGTTCATTGTTTGCATGGGGT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTGTGGTCTTCCTGCCTaGCTCAGAATAAACAGCACA +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQCGLPA*LRINST
Trigger: TGTGCTGTTTATTCTGAGGCAGGCAGGAAGACCACA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCCGCTGTGAGGTGGCCTaGTTGGGAATCATTGAGATG +
Preference number: 4 (lower is better)
Translates to: VTTSLFWSLQFLDYCRGCRCEVA*LGIIEM
Trigger: CATCTCAATGATTCCCAAGCAGGCCACCTCACAGCG...GCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACAGAAATGATGTAATTTaGCTAAGGTTTTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHRNDVI*LRFYSQ
Trigger: CTGGCTGTAAAACCTTAGGCAAATTACATCATTTCT...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTCTTCCTGGTAGTCCTTaGTCGCCGCGAAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: CVVARISTLRAAFVFLFFLPGSP*SPRRCR
Trigger: CCGGCATCTTCGCGGCGACCAAGGACTACCAGGAAG...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAGGATACTTGTTTGCTaGAGGCTTCACAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIRILVC*RLHSAL
Trigger: GAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATCCT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGGACTCTCTAACTCCCTaGCTATGTAGGTGCTATGTC +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQDSLTP*LCRCYV
Trigger: GACATAGCACCTACATAGCCAGGGAGTTAGAGAGTC...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGGAGAACCTTGTGGGTaGAAGGCAGTGACATTCCGA +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIGEPCG*KAVTFR
Trigger: TCGGAATGTCACTGCCTTCCACCCACAAGGTTCTCC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATGTACTTAGGCAGGGATaGGGAGAGCTGCGAACACAG +
Preference number: 4 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHVLRQG*GELRTQ
Trigger: CTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTAC...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp GGGCACATGTGGCCTTTTGTTCCTTCTGGGGAGAATGTGAATGCTGGACTCCTGACCACCTCCCTGTTCTaGTCGTTGCAGTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GHMWPFVPSGENVNAGLLTTSLF*SLQFLD
Trigger: GTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGT...CAGGAGTCCAGCATTCACATTCTCCCCAGAAGGAACAAAAGGCCACATGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp ACTGCCCAGTTGATAAGGCAGCCTGAAGCCCCTCTCTaGATGGTGAATGCCCAGATCCAGAGCCTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: TAQLIRQPEAPL*MVNAQIQSLRL
Trigger: TAGCCTTAGGCTCTGGATCTGGGCATTCACCATCAAGAGAGGGGCTTCAGGCTGCCTTATCAACTGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGAACAAAGAAACTGGGTaGAAGCTTTGGGACAGACTC +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQNKETG*KLWDRL
Trigger: GAGTCTGTCCCAAAGCTTTCACCCAGTTTCTTTGTT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCAATCAGGCCTCCTCTaGCTGCCATGTGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQQSGLL*LPCAWS
Trigger: CGACCAGGCACATGGCAGGCAGAGGAGGCCTGATTG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATATGCTAGCTCCTTCCTaGGCTTCCTGTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHMLAPS*ASCLQP
Trigger: AGGCTGAAGACAGGAAGCCCAGGAAGGAGCTAGCAT...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGCAGGTGAAGACAGACTaGGTAAAGAATTATGGGTCT +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQQVKTD*VKNYGS
Trigger: AGACCCATAATTCTTTACTCAGTCTGTCTTCACCTG...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCAAAGCCATTGTCACTTaGACATCAGCCACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VTTSLFWSLQFLDYCRGCKAIVT*TSATCL
Trigger: CAGACAGGTGGCTGATGTGCAAGTGACAATGGCTTT...GCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCTTCACAGCGCCCTCTaGGAGTTCATCAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQLHSAL*EFINPG
Trigger: GCCCGGATTGATGAACTCCCAGAGGGCGCTGTGAAG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATTGCTGGGTTCTGCCTaGGCATCTACCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSLLGSA*ASTQGS
Trigger: ACTCCCCTGGGTAGATGCCCAGGCAGAACCCAGCAA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAAAGAGACCAGATGTTaGACCTGGTCAAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIKETRC*TWSSLR
Trigger: CCTGAGACTTGACCAGGTCCAACATCTGGTCTCTTT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCATCCTTCAGAACAGATaGCCGCATACCCACTTCACT +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIILQNR*PHTHFT
Trigger: AGTGAAGTGGGTATGCGGCCATCTGTTCTGAAGGAT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTCATTCCTTTTCCGCTaGCACCTTGCCAAATATTTG +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQSFLFR*HLAKYL
Trigger: CAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATGA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCGGCTTCCCTTCTCTGTGAATTAACCATCCCCACACTCCTCTCCATTTCTTTTCCACTTGTAGGGGAGTaGAGGATGGGTGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PASLLCELTIPTLLSISFPLVGE*RMGGVG
Trigger: GCCAACTCCACCCATCCTCCACTCCCCTACAAGTGG...AAAAGAAATGGAGAGGAGTGTGGGGATGGTTAATTCACAGAGAAGGGAAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCGTCATCAGCAATCATTaGCAGATTATGTGCCGAACA +
Preference number: 4 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCVISNH*QIMCRT
Trigger: TGTTCGGCACATAATCTGCCAATGATTGCTGATGAC...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp ACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCACACCTGAAGGAAGAAAGTGGTaGCTCTTAAGGCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TCLFLALSTSLCSDPCTPEGRKW*LLRPWL
Trigger: AAGCCAAGGCCTTAAGAGCCACCACTTTCTTCCTTC...AGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAGTGGGTGGAAGGCAGTaGCATTCCGAGTTGGACTCT +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSVGGRQ*HSELDS
Trigger: AGAGTCCAACTCGGAATGTCACTGCCTTCCACCCAC...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTTCCCTTGATGAGAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGCCACCATGCCCAGCCTaGATCATTGTCTTAAACTTA +
Preference number: 4 (lower is better)
Translates to: VPLMRVLRQGWGELRTQVPPCPA*IIVLNL
Trigger: TAAGTTTAAGACAATGATTCAGGCTGGGCATGGTGG...CACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTCTCATCAAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp GCCGAACACTTCCTTTCTTGGAGACATATGATGGCTAATCACCTGGGAGGCTTCGCACACCTTTCCAGATaGGTTTCCTGCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: AEHFLSWRHMMANHLGGFAHLSR*VSCCCL
Trigger: CAGACAGCAGCAGGAAACTCATCTGGAAAGGTGTGC...GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp ACCATCCCTCCACTTGAAAGTGAAGCAGCTGGCTTGGAGATGCTAAGAAATGTGTTCCAATGGCTGAGATaGGGCATAGGGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: TIPPLESEAAGLEMLRNVFQWLR*GIGPSP
Trigger: TGGGCTTGGCCCTATGCCTCATCTCAGCCATTGGAA...CACATTTCTTAGCATCTCCAAGCCAGCTGCTTCACTTTCAAGTGGAGGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp ACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCACACCTTTCTTCCTCACTGCTTaGATCTGCAGTATTTCCACC +
Preference number: 4 (lower is better)
Translates to: TCLFLALSTSLCSDPCTPFFLTA*ICSIST
Trigger: GGTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAA...AGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAACATTTGCTGGGTTCTaGCTGGGCATCTACCCAGGG +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSTFAGF*LGIYPG
Trigger: CCCTGGGTAGATGCCCAGGCAGAACCCAGCAAATGT...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCTTGGAGACCTGCCCCAGCCAAGCTaGTACCGGCCTTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: CHQQSLADYVPNTSFLGDLPQPS*YRPLST
Trigger: AGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAG...GTCTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCCTGGGTCTGCACATATaGATGAAGAGGAAAATAATG +
Preference number: 4 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCLGLHI*MKRKIM
Trigger: CATTATTTTCCTCTTCATGCATATGTGCAGACCCAG...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCACTGGTCTCAAACTCCTaGACTCAAGTGACCCTCCCG +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSLVSNS*TQVTLP
Trigger: CGGGAGGGTCACTTGAGTCCAGGAGTTTGAGACCAG...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATTTGGGAGCCCGAGGTaGGTGGACTGCTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSFGSPR*VDCLKS
Trigger: TGACTTCAAGCAGTCCACCCACCTCGGGCTCCCAAA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp ACCATCCCTCCACTTGAAAGTGAAGCAGCTGGCTTGGAGATGCTAAGAAATGTGGGAGTGGAGGATGGGTaGAGTTGGCCTGCTAGAATC +
Preference number: 4 (lower is better)
Translates to: TIPPLESEAAGLEMLRNVGVEDG*SWPARI
Trigger: GATTCTAGCAGGCCAACTCCACCCATCCTCCACTCC...CACATTTCTTAGCATCTCCAAGCCAGCTGCTTCACTTTCAAGTGGAGGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp GAGATGCTAAGAAATGTGGCAAAGGTCGTGTGGCTGTaGACCCCTAAAGCCCATGCCCTTCCATCATGCATG +
Preference number: 4 (lower is better)
Translates to: EMLRNVAKVVWL*TPKAHALPSCM
Trigger: CATGCATGATGGAAGGGCATGGGCTTTAGGGGTCAACAGCCACACGACCTTTGCCACATTTCTTAGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGACATGGCCTCAAAACTaGAGGACAATTTTAATTTCG +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQTWPQN*RTILIS
Trigger: CGAAATTAAAATTGTCCTTCAGTTTTGAGGCCATGT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAGAAACCTCCTCAGGTaGGACTGTTTTTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIRNLLR*DCFSEL
Trigger: AAGTTCAGAAAAACAGTCTCACCTGAGGAGGTTTCT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCAAAGTCAGTGTTCTaGACCAATGAACTATGTTGC +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIPKSVF*TNELCC
Trigger: GCAACATAGTTCATTGGTTCAGAACACTGACTTTGG...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GCCGAACACTTCCTTTCTTGGAGACATATGATGGCTAATCACCTGGGAGGCTTCAGAATCTTCTGTGACTaGGCCGGCAGTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: AEHFLSWRHMMANHLGGFRIFCD*AGSDHH
Trigger: ATGATGGTCACTGCCGGCTCAGTCACAGAAGATTCT...GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp GTTCCCTTGATGAGAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGCTGCTTGGGAATCATTaGGATGAATCACTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: VPLMRVLRQGWGELRTQVLLGNH*DESLRQ
Trigger: TTGACGAAGTGATTCATCTCAATGATTCCCAAGCAG...CACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTCTCATCAAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATGAGGCTTCTGGAAAATaGGTATCAGGAAGTGACACT +
Preference number: 4 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHEASGK*VSGSDT
Trigger: AGTGTCACTTCCTGATACTCATTTTCCAGAAGCCTC...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp TCTCCCCCAGGTCCTAGCTCGCTCACTCTGCGCCTCATTTGCCTTCTTGCTTTTACAGTTTTGACTTTCTaGCAAAAGTTCCAATCCGGG +
Preference number: 4 (lower is better)
Translates to: SPPGPSSLTLRLICLLAFTVLTF*QKFQSG
Trigger: CCCGGATTGGAACTTTTGGCAGAAAGTCAAAACTGT...AAAAGCAAGAAGGCAAATGAGGCGCAGAGTGAGCGAGCTAGGACCTGGGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000563404.1
CDS-3UTR GCA 90 bp GCCGAACACTTCCTTTCTTGGAGACATATGATGGCTAATCACCTGGGAGGCTTCCTGTGCTCTGACCCTTaGACACCTTTCCAGATGAGT +
Preference number: 4 (lower is better)
Translates to: AEHFLSWRHMMANHLGGFLCSDP*TPFQMS
Trigger: ACTCATCTGGAAAGGTGTGCAAGGGTCAGAGCACAG...GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CCGGCTTCCCTTCTCTGTGAATTAACCATCCCCACACTCCTCTCCATTTCTTTTATAGGGAGCATTCTCTaGCTACAGTGGGCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PASLLCELTIPTLLSISFIGSIL*LQWALG
Trigger: TCCCAAGGCCCACTGTAGGCAGAGAATGCTCCCTAT...AAAAGAAATGGAGAGGAGTGTGGGGATGGTTAATTCACAGAGAAGGGAAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAGGAAACACTGAGGTGTaGGCATATGCAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSGNTEV*AYAAGL
Trigger: CAGACCTGCTGCATATGCCCACACCTCAGTGTTTCC...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCGGCTTCCCTTCTCTGTGAATTAACCATCCCCACACTCCTCTCCATTTCTTTTCCACATGCCTTTTCCTaGCTCTCTCCACTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PASLLCELTIPTLLSISFPHAFS*LSPLAC
Trigger: ACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGG...AAAAGAAATGGAGAGGAGTGTGGGGATGGTTAATTCACAGAGAAGGGAAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp CCGGCTTCCCTTCTCTGTGAATTAACCATCCCCACACTCCTCTCCATTTCTTTTCTTAAGGCCTTGGCTTaGAGCTGCCCCATCTTACTC +
Preference number: 4 (lower is better)
Translates to: PASLLCELTIPTLLSISFLKALA*SCPILL
Trigger: GAGTAAGATGGGGCAGCTCCAAGCCAAGGCCTTAAG...AAAAGAAATGGAGAGGAGTGTGGGGATGGTTAATTCACAGAGAAGGGAAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp AGCCTGAATCATTGTCTTAAACTTAGTGGTCACTTCTATGCTTCCTTGGCCACTTCTGGCCCTCGCCTCTaGCTATTGCCTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLNHCLKLSGHFYASLATSGPRL*LLPLRQ
Trigger: CTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA...AGTGGCCAAGGAAGCATAGAAGTGACCACTAAGTTTAAGACAATGATTCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp CAAAAGACTGTATGTAGTACGAGGTGCTGGAGAACCTaGTGGGTGGAAGGCAGTGACATTCCGAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: QKTVCSTRCWRT*WVEGSDIPSWT
Trigger: AGTCCAACTCGGAATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCTCGTACTACATACAGTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp ATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACCTATAGTGCACCTACACTGGACACGCTGTaGGGTGGCCTGCTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: MKRKIMEPAIETSTYSAPTLDTL*GGLLGN
Trigger: ATTCCCAAGCAGGCCACCTCACAGCGTGTCCAGTGT...AGGTGCACTATAGGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp AAAAAGAAGATAGGATACTTGTTTGCTGGAGGCTTCACAGCGCCCTCTGGGAGTGATAGGATACTTGTTTaGTGGAGGCTTCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: KKKIGYLFAGGFTAPSGSDRILV*WRLHSA
Trigger: GGCGCTGTGAAGCCTCCAGCAAACAAGTATCCTATC...ACTCCCAGAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATCCTATCTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR GCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCAGGCCTCCTCTGCCTaGCATGTGCCTGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESQASSA*HVPGRP
Trigger: AGGCCGACCAGGCACATGGCAGGCAGAGGAGGCCTG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCAATTGTGCTTTGCCTaGACAATCAGGCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQQLCFA*TIRPPL
Trigger: CAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAATTCCACTACGCTATaGTATACAGAACCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAINSTTL*YTEPGK
Trigger: TTTCCCTGGTTCTGTATAGCATAGCGTAGTGGAATT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTATTCTCTCAAAGTATaGTTGGCATTTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQYSLKV*LAFPQI
Trigger: AATTTGGGGAAATGCCAACCATACTTTGAGAGAATA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGACGGCTGGTTTGTGGTaGAGCTGTGATTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQTAGLW*SCDLTL
Trigger: CAGAGTCAAATCACAGCTCCACCACAAACCAGCCGT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAGGACTACAGAGCAGCTaGCAGCCGCAGGGGCATTAC +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVGLQSS*QPQGHY
Trigger: GTAATGCCCCTGCGGCTGCCAGCTGCTCTGTAGTCC...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTGTAGTACGAGGTGCTaGAGAACCTTGTGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQCSTRC*RTLWVE
Trigger: TTCCACCCACAAGGTTCTCCAGCACCTCGTACTACA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp GGCAGCCCTGAAAGTGCCCTTTACTCTCAAGGCATTTaGTCCTCAGAGCCCAGAGATGCATATACATTTGCT +
Preference number: 4 (lower is better)
Translates to: GSPESALYSQGI*SSEPRDAYTFA
Trigger: AGCAAATGTATATGCATCTCTGGGCTCTGAGGACAAAATGCCTTGAGAGTAAAGGGCACTTTCAGGGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp TTCAGTTTGACACCTATTACCTGTGTCAATTGTGCTTaGCCTGCACAATCAGGCCTCCTCTGCCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: FSLTPITCVNCA*PAQSGLLCLPC
Trigger: ACATGGCAGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGACACAGGTAATAGGTGTCAAACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp ACAGCTGTTCAGTTTGACACCTATTACCTGTGTCAATaGTGCTTTGCCTGCACAATCAGGCCTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TAVQFDTYYLCQ*CFACTIRPPLP
Trigger: AGGCAGAGGAGGCCTGATTGTGCAGGCAAAGCACAATTGACACAGGTAATAGGTGTCAAACTGAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp TTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTaGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FILIVTTSLFWS*QFLDYCRGCCP
Trigger: AGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCTTTCAGTGTGAGCAATaGAGAGGTCTTTTGATGAAT +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIFQCEQ*RGLLMN
Trigger: ATTCATCAAAAGACCTCTTCATTGCTCACACTGAAA...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCACCCTTTTTGTATTTTaGCAGTCACAAGTCCATTGT +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAITLFVF*QSQVHC
Trigger: ACAATGGACTTGTGACTGTCAAAATACAAAAAGGGT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTTCCCTTGATGAGAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGCTGAAGCTTCAGAAATaGTGTAATTTGCCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: VPLMRVLRQGWGELRTQVLKLQK*CNLPKV
Trigger: AACCTTAGGCAAATTACATCATTTCTGAAGCTTCAG...CACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTCTCATCAAGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp GCCGAACACTTCCTTTCTTGGAGACATATGATGGCTAATCACCTGGGAGGCTTCCACCTTCTTCCTCACTaGTTGCATCTGCAGTATTTC +
Preference number: 4 (lower is better)
Translates to: AEHFLSWRHMMANHLGGFHLLPH*LHLQYF
Trigger: GAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTG...GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAACCTCTGCCTGCCATGTaGCTGGTCGGCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEPLPAM*LVGLVP
Trigger: TGGTACCAGGCCGACCAGGCACATGGCAGGCAGAGG...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGATATTGTAGGGGTTGCTaGCCTCATCCTGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CVYFDSDHLPVLVVAVPGYCRGC*PHPVPG
Trigger: ACCAGGAACAGGATGAGGGCAGCAACCCCTACAATA...TCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCACTTAGGAGAAAGCTATaGTCAGGTGCTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSLRRKL*SGAHSA
Trigger: AGCTGAGTGAGCACCTGACCATAGCTTTCTCCTAAG...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGCACCAGATCATGAATaGGTATTTCAGTTTTGTACT +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIAPDHE*VFQFCT
Trigger: AGTACAAAACTGAAATACCCATTCATGATCTGGTGC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTGCCTGCCATGTGCCTaGTCGGCCTGGTACCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESCLPCA*SAWYQS
Trigger: GGACTGGTACCAGGCCGACCAGGCACATGGCAGGCA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCTATGCAAAGATCATGTaGGATATTTTCAAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIYAKIM*DIFKVQ
Trigger: CTGGACCTTGAAAATATCCCACATGATCTTTGCATA...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp ATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACCTATAGTGCACCTATTCTCTGCCTACAGTaGGCCTTGGGAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: MKRKIMEPAIETSTYSAPILCLQ*ALGKVG
Trigger: CCCCACCTTTCCCAAGGCCCACTGTAGGCAGAGAAT...AGGTGCACTATAGGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCACCAAACCCAGATTTCTaGGAACCAGGGATCAAATGT +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSPNPDF*EPGIKC
Trigger: ACATTTGATCCCTGGTTCTCAGAAATCTGGGTTTGG...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAAGCCTCCCGAGCAGCTaGGATTACAGGCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAESLPSS*DYRRLP
Trigger: TGGCAGACGCCTGTAATCTCAGCTGCTCGGGAGGCT...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTTTGTGGTGGAGCTGTaGTTTGACTCTGGATGTCTA +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQFVVEL*FDSGCL
Trigger: TAGACATCCAGAGTCAAATCACAGCTCCACCACAAA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTACATATGCAGCAGGTCTaGGGGCAGAGTAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVHMQQV*GQSKPC
Trigger: GCAAGGCTTACTCTGCCCTCAGACCTGCTGCATATG...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATCTGAGGGGAGGCTGGTaGCTGTGGTCTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNLRGGW*LWSSCL
Trigger: CAGGCAGGAAGACCACAGTCACCAGCCTCCCCTCAG...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAATGGCACCAGGTCAACTaGGGGGAGGCTGGTGACTGT +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEWHQVN*GEAGDC
Trigger: ACAGTCACCAGCCTCCCCTCAGTTGACCTGGTGCCA...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATTCTTCCTCACTGCTTaGATCTGCAGTATTTCCACC +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSFFLTA*ICSIST
Trigger: GGTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp AAAAAGAAGATAGGATACTTGTTTGCTGGAGGCTTCACAGCGCCCTCTGGGAGTCACCTTCTTCCTCACTaGTTGCATCTGCAGTATTTC +
Preference number: 4 (lower is better)
Translates to: KKKIGYLFAGGFTAPSGSHLLPH*LHLQYF
Trigger: GAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTG...ACTCCCAGAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATCCTATCTTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGACAACTGAGTCTGTATaGAGGATCTCCAGAACGCAA +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQTTESV*RISRTQ
Trigger: TTGCGTTCTGGAGATCCTGCATACAGACTCAGTTGT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATGTAGACAATCCACGTaGTGGTCCTTGGCAATACAT +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSCRQST*WSLAIH
Trigger: ATGTATTGCCAAGGACCAGCACGTGGATTGTCTACA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIFKQFS*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTACAGTTTTGACTTTCTaGCAAAAGTTCCAATCCGGG +
Preference number: 4 (lower is better)
Translates to: CVVARISTLRAAFVFLFFTVLTF*QKFQSG
Trigger: CCCGGATTGGAACTTTTGGCAGAAAGTCAAAACTGT...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR GCA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATACTCAGTTACTGGCTTTaGTCCCACTGCCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVILSYWL*SHCPCG
Trigger: CCCACATGGGCAGTGGGAGCAAAGCCAGTAACTGAG...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAGTCAATGCTTTGTCTaGTTTCCCATAGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQSQCFV*FPIGLL
Trigger: CAACAGCCCTATGGGAAACCAGACAAAGCATTGACT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCACCCTGGAATGATAAATaGACTGGTGCTTTCATACCC +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSPWNDK*TGAFIP
Trigger: GGGTATGAAAGCACCAGTCCATTTATCATTCCAGGG...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCCACGTGCTGGTCCTTaGCAATACATCATGCTAATT +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQPRAGP*QYIMLI
Trigger: AATTAGCATGATGTATTGCCAAGGACCAGCACGTGG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAGACAATCCACGTGCTaGTCCTTGGCAATACATCAT +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQRQSTC*SLAIHH
Trigger: ATGATGTATTGCCAAGGACCAGCACGTGGATTGTCT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGACCAGGGATCAAATGTaGCTTCCAGTCCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQTRDQM*LPVQRK
Trigger: TTTTCTCTGGACTGGAAGCCACATTTGATCCCTGGT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAGAGGCCTTGTGCTGCTaGGAACATCACCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVEALCC*EHHPGE
Trigger: TTCTCCTGGGTGATGTTCCCAGCAGCACAAGGCCTC...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTAGACGTCAGGCATCCTaGGGCTTATCCATCACTGCC +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIRRQAS*GLSITA
Trigger: GGCAGTGATGGATAAGCCCCAGGATGCCTGACGTCT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTACTGAGAAGGGCAGTGTaGACTACAGAGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVLRRAV*TTEQLA
Trigger: TGCCAGCTGCTCTGTAGTCCACACTGCCCTTCTCAG...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTCTCCATCTCCCAGGCTaGAGTGTGATGGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFILHLPG*SVMAQS
Trigger: TGACTGTGCCATCACACTCCAGCCTGGGAGATGGAG...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp ACATATTCCTCCTTGGTTGTGAATACTCTGAGCCCTTaGGTAACAGTGGCTGCAAGTGTAGGGGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TYSSLVVNTLSP*VTVAASVGVFQ
Trigger: CTGAAACACCCCTACACTTGCAGCCACTGTTACCAAAGGGCTCAGAGTATTCACAACCAAGGAGGAATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCAAACATCACCTCACTaGACCCTCATAACAACCTAT +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQQTSPH*TLITTY
Trigger: ATAGGTTGTTATGAGGGTTCAGTGAGGTGATGTTTG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGTTGATAAGGCAGCCTaGAGCCCCTCTCTTGATGGT +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIVDKAA*SPSLDG
Trigger: ACCATCAAGAGAGGGGCTTCAGGCTGCCTTATCAAC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATACAGCCAGTCATTAGATaGGCTGGGTCCGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVIQPVIR*AGSVCF
Trigger: AAAGCAGACGGACCCAGCTCATCTAATGACTGGCTG...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTGTTTGAAGGTATTTTaGCTGCAGGTGAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQCLKVF*LQVRLV
Trigger: AACCAGTCTCACCTGCAGGCAAAATACCTTCAAACA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCCCTGGCTATGTAGGTaGTATGTCATGTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQPWLCR*YVMSFS
Trigger: AGAAAAAGACATGACATAGCACCTACATAGCCAGGG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGCAGAGGCTGCAGTGTaGCAAGATCACGCCCACTAC +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEAEAAV*QDHAHY
Trigger: GTAGTGGGCGTGATCTTGGCACACTGCAGCCTCTGC...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTATGGCGTGATGGCATATaGCTGCAGTCCCAGCTACTA +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVWRDGI*LQSQLL
Trigger: TAGTAGCTGGGACTGCAGGCATATGCCATCACGCCA...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAGGGCTTATCCATCACTaGCCAGTTGATAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVGLIHH*PVDKAA
Trigger: GGCTGCCTTATCAACTGGGCAGTGATGGATAAGCCC...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTCTCAAGCAATCCTCCTaGCTCTGTCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFILKQSS*LCLQSS
Trigger: GCTACTCTGGAGACAGAGGCAGGAGGATTGCTTGAG...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCTTGGAGACCCCTGTTCTGGTCGTTaGAGTTCCTGGACTATTGTA +
Preference number: 4 (lower is better)
Translates to: CHQQSLADYVPNTSFLGDPCSGR*SSWTIV
Trigger: TACAATAGTCCAGGAACTGCAACGACCAGAACAGGG...GTCTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTAGTGACATTCCGAGTTaGACTCTGAGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFISDIPS*TLRAKW
Trigger: CCACTTGGCCCTCAGAGTCCAACTCGGAATGTCACT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TCCTCAGAACATCCAACTCTGCTGAAGTGTCACATTTTCACAGAAGTCTTCCTCCTTCACAGCGCCCTCTaGGAGTTCATCAATCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSEHPTLLKCHIFTEVFLLHSAL*EFINLN
Trigger: ATTCAGATTGATGAACTCCCAGAGGGCGCTGTGAAG...GAGGAAGACTTCTGTGAAAATGTGACACTTCAGCAGAGTTGGATGTTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563404.1
CDS-3UTR CCA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATAAGGTGGAGGTCCAGCTaGGTGTGTAGAAGGGGTATT +
Preference number: 4 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVIRWRSS*VCRRGI
Trigger: AATACCCCTTCTACACACCCAGCTGGACCTCCACCT...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp ACTTGTGTTGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCGGACCCACTGTTCTATaGTACGTCTCCACAAAGGGA +
Preference number: 4 (lower is better)
Translates to: TCVVISNHWQIMCRTLPFGPTVL*YVSTKG
Trigger: TCCCTTTGTGGAGACGTACCATAGAACAGTGGGTCC...GAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACAACACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp ATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACCTATAGTGCACCTGGTCGTTGCAGTTCCTaGACTATTGTAGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: MKRKIMEPAIETSTYSAPGRCSS*TIVGVA
Trigger: AGCAACCCCTACAATAGTCCAGGAACTGCAACGACC...AGGTGCACTATAGGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp TGTTTGAAGGTATTTTGCCTGCAGGTGAGACTGGTTTaGAGGGCACAGAAACGTAGCCTGAATGAACCATTC +
Preference number: 4 (lower is better)
Translates to: CLKVFCLQVRLV*RAQKRSLNEPF
Trigger: GAATGGTTCATTCAGGCTACGTTTCTGTGCCCTCAAAACCAGTCTCACCTGCAGGCAAAATACCTTCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GATACTTGTTTGCTGGAGGCTTCACAGCGCCCTCTGGGAGTTCATCAATCTCTTTCCTTTCCGTTTGTTTaGCTTTCCAAACTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: DTCLLEASQRPLGVHQSLSFPFV*LSKLVF
Trigger: AAAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGA...AAGAGATTGATGAACTCCCAGAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATCTGAGGAAATTTTCTaGCAGGAGCTTTTAATCCTG +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSSEEIF*QELLIL
Trigger: CAGGATTAAAAGCTCCTGTCAGAAAATTTCCTCAGA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATCAGGGGAGTTGTATCTaGGGGCCGAGTCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNQGSCI*GPSPLS
Trigger: ACTGAGAGGACTCGGCCCTCAGATACAACTCCCCTG...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATGGTGGGAGGATCACTTaGACCAGGAGGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNGGRIT*TRRQRL
Trigger: CAACCTCTGCCTCCTGGTTCAAGTGATCCTCCCACC...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATCTTATGGGAGTATCTaGCACATTCATCACAGAAAG +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSSYGSI*HIHHRK
Trigger: CTTTCTGTGATGAATGTGTCAGATACTCCCATAAGA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTCCCACAGCTCTTGGCTaGGCTTTAATATCTACCCAC +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIPTALG*ALISTH
Trigger: GTGGGTAGATATTAAAGCTCAGCCAAGAGCTGTGGG...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAACCAGCCAAGTGGTTCTaGGAAGGGCAGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEPAKWF*EGQCGL
Trigger: TAGTCCACACTGCCCTTCTCAGAACCACTTGGCTGG...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTAACCCAGGGAAACACTaGGGTGTGGGCATATGCAGC +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESNPGKH*GVGICS
Trigger: GCTGCATATGCCCACACCTCAGTGTTTCCCTGGGTT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTGTACATTCTTGCTCTaGACTGTATGTGTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQCTFLL*TVCVSY
Trigger: ATAGCTCACACATACAGTGCAGAGCAAGAATGTACA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTGGGAGCCATGCTCCTaGTCAGAGTTCCTAGAATGT +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIWEPCS*SEFLEC
Trigger: ACATTCTAGGAACTCTGAGCAGGAGCATGGCTCCCA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAACAGTATGGGAGCCATaGTCCTGCTCAGAGTTCCTA +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVTVWEP*SCSEFL
Trigger: TAGGAACTCTGAGCAGGAGCATGGCTCCCATACTGT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTAGCAGTACTGGGAGCTaGACACCACTGGCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESSSTGS*TPLALE
Trigger: CTCTAAGGCCAGTGGTGTGCAGCTCCCAGTACTGCT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGTATGTAGTACGAGGTaGTGGAGAACCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIVCSTR*WRTLWV
Trigger: CACCCACAAGGTTCTCCAGCACCTCGTACTACATAC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGATAGGCTATGTGCTCTaGTGCTGTAACAAATACTCA +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQIGYVL*CCNKYS
Trigger: TGAGTATTTGTTACAGCAGCAGAGCACATAGCCTAT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCATTACCTTACTTCATaGCAGGCAAACCACGTTAAA +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQHYLTS*QANHVK
Trigger: TTTAACGTGGTTTGCCTGGCATGAAGTAAGGTAATG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATAGACTATTGTAGGGGTTaGTGCCCTCATCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVIDYCRG*CPHPVP
Trigger: AGGAACAGGATGAGGGCAGCAACCCCTACAATAGTC...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAAATCTAGGGTCCACTaGGCTGGTAAATATGTAAGT +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQKSRVH*AGKYVS
Trigger: ACTTACATATTTACCAGCCCAGTGGACCCTAGATTT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTGGAGTCTCATCTTATaGGAGTATCTGACACATTCA +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQWSLIL*EYLTHS
Trigger: TGAATGTGTCAGATACTCCCATAAGATGAGACTCCA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAAAAGCCTAGTCACATaGCCAGGGTCAACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVKSLVT*PGSTVR
Trigger: CCTGACTGTTGACCCTGGCCATGTGACTAGGCTTTT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATACTCTGCATCAGGCTGTaGGTTGATTTCAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVILCIRL*VDFRAV
Trigger: AACAGCCCTGAAATCAACCCACAGCCTGATGCAGAG...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp AATAAGACAAACCCTAATCTGTTGGTGAAGCTAAGCTaGCAGGTGGGCACTTATTACTCCAGCCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: NKTNPNLLVKLS*QVGTYYSSQVV
Trigger: AACCACTTGGCTGGAGTAATAAGTGCCCACCTGCAAGCTTAGCTTCACCAACAGATTAGGGTTTGTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATCCTTTCCGTTTGTTTaGCTTTCCAAACTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSSFPFV*LSKLVF
Trigger: AAAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTACCCTCACCTGCACTTaGTTCTATTGTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFITLTCT*FYCQLA
Trigger: AGCAAGCTGACAATAGAATCAAGTGCAGGTGAGGGT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAAAAAATTCAAAACAGTaGATGCAGACTGGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSKNSKQ*MQTGGV
Trigger: TACTCCTCCAGTCTGCATTCACTGTTTTGAATTTTT...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATTTCCCCAAATTTGGTaGTTTTGTGATGTGTACAAG +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSFPQIW*FCDVYK
Trigger: CTTGTACACATCACAAAATCACCAAATTTGGGGAAA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGGTGGGTGGACTGCTTaGAGTCAGGAGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEGGWTA*SQEFET
Trigger: GGTTTCAAACTCCTGACTTCAAGCAGTCCACCCACC...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGCAAATACTCGCTTATaGAATGGAGTCTCATCTTAT +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQANTRL*NGVSSY
Trigger: ATAAGATGAGACTCCATTTCATAAGCGAGTATTTGC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGGGGCTTTATTAGGCTaGGCCTCTCCAGGGAATAAC +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEGALLG*ASPGNN
Trigger: GTTATTCCCTGGAGAGGCTCAGCCTAATAAAGCCCC...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTTCCGAGTTGGACTCTaGGGGCCAAGTGGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNFRVGL*GPSGAL
Trigger: TAAAGCCCCACTTGGCCCTCAGAGTCCAACTCGGAA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAGACCTCTAAATACCTaGTTCCTCAGTCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVRPLNT*FLSPWG
Trigger: ACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGATGGGAATCATTGAGATaGATCACTTCGTCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: CVYFDSDHLPVLVVAVPGWESLR*ITSSSH
Trigger: ATGACTTGACGAAGTGATTCATCTCAATGATTCCCA...TCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCCTTATTGTCTCATTTaGCATTCCAATCATCCATTC +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQPYCLI*HSNHPF
Trigger: GAATGGATGATTGGAATGGCAAATGAGACAATAAGG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAGGGATCTTATTTTGTTaGCCAGCTTATTCTCAAATG +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSGILFC*PAYSQM
Trigger: CATTTGAGAATAAGCTGGGCAACAAAATAAGATCCC...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATACTGTGCCAGGTACCTTaGTGGGCATTTTGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVILCQVP*WAFCSV
Trigger: TACAGAACAAAATGCCCAGCAAGGTACCTGGCACAG...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAAATGTACATACAAACTaGGGTTCTGTCAATGACAAC +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSNVHTN*GSVNDN
Trigger: GTTGTCATTGACAGAACCCCAGTTTGTATGTACATT...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp AAAAAGAAGATAGGATACTTGTTTGCTGGAGGCTTCACAGCGCCCTCTGGGAGTAATGTACATACAAACTaGGGTTCTGTCAATGACAAC +
Preference number: 4 (lower is better)
Translates to: KKKIGYLFAGGFTAPSGSNVHTN*GSVNDN
Trigger: GTTGTCATTGACAGAACCCCAGTTTGTATGTACATT...ACTCCCAGAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATCCTATCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTAGGTGCTCACTCAGCTaGAAGTGTGGCCACCATAAG +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESRCSLS*KCGHHK
Trigger: CTTATGGTGGCCACACTTCCAGCTGAGTGAGCACCT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATGTAACCCTAGCACTTTaGGAGGACCAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNVTLAL*EDQAGG
Trigger: TCCACCTGCCTGGTCCTCCCAAAGTGCTAGGGTTAC...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTACTCTGAGGGCCAAGTaGGGCTTTATTAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESTLRAK*GFIRLS
Trigger: GCTCAGCCTAATAAAGCCCCACTTGGCCCTCAGAGT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTGTCTCCAGAGTAGCTaGGACTACAGACATACACCA +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFICLQSS*DYRHTP
Trigger: TGGTGTATGTCTGTAGTCCCAGCTACTCTGGAGACA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCTCAAGCCAGAAACTTaGAGTAATTATTTACACTCC +
Preference number: 4 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQLKPET*SNYLHS
Trigger: GGAGTGTAAATAATTACTCCAAGTTTCTGGCTTGAG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp AGCCTGAATCATTGTCTTAAACTTAGTGGTCACTTCTATGCTTCCTTGGCCACTTGCCAGGTACCTTGCTaGGCATTTTGTTCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SLNHCLKLSGHFYASLATCQVPC*AFCSVV
Trigger: AACTACAGAACAAAATGCCCAGCAAGGTACCTGGCA...AGTGGCCAAGGAAGCATAGAAGTGACCACTAAGTTTAAGACAATGATTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp AGCCTGAATCATTGTCTTAAACTTAGTGGTCACTTCTATGCTTCCTTGGCCACTCAGAACTTAACTGTGTaGTGTCTGGGTCTGCACATA +
Preference number: 4 (lower is better)
Translates to: SLNHCLKLSGHFYASLATQNLTV*CLGLHI
Trigger: TATGTGCAGACCCAGACACCACACAGTTAAGTTCTG...AGTGGCCAAGGAAGCATAGAAGTGACCACTAAGTTTAAGACAATGATTCAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp TCTGACATTAAAGACTCTGGATTGTTTGAAGGTATTTaGCCTGCAGGTGAGACTGGTTTTGAGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: SDIKDSGLFEGI*PAGETGFEGTE
Trigger: TTCTGTGCCCTCAAAACCAGTCTCACCTGCAGGCAAAATACCTTCAAACAATCCAGAGTCTTTAATGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp TCCTTGTCATTGCTAACACAGTGTCTGACACTTGTGTaGTCATCAGCAATCATTGGCAGATTATGTGCCGAA +
Preference number: 4 (lower is better)
Translates to: SLSLLTQCLTLV*SSAIIGRLCAE
Trigger: TTCGGCACATAATCTGCCAATGATTGCTGATGACAACACAAGTGTCAGACACTGTGTTAGCAATGACAAGGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTACACAGAAACGTAGCCTaGATGAACCATTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVHRNVA*MNHSEL
Trigger: GAGTTCTGAATGGTTCATTCAGGCTACGTTTCTGTG...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAACATCCATTAGGACTATaGGCAGTACTGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEHPLGL*AVLGAA
Trigger: TGCAGCTCCCAGTACTGCTCATAGTCCTAATGGATG...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTAAAGAATTATGGGTCTaGTTCCCACAGCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIKELWV*FPQLLA
Trigger: AGCCAAGAGCTGTGGGAATCAGACCCATAATTCTTT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGACAGCTGTTCAGTTTaGCACCTATTACCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIDSCSV*HLLPVS
Trigger: TGACACAGGTAATAGGTGTCAAACTGAACAGCTGTC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATATTTCTTGGAGACATATaGTGGCTAATCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVIFLGDI*WLITWE
Trigger: CTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAA...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR GCA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAAGTATCCACCTTGAGTaGTTAGCTCAAAATTGTATT +
Preference number: 4 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSSIHLE*LAQNCI
Trigger: AATACAATTTTGAGCTAAGCACTCAAGGTGGATACT...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGCCACCTCCTCACTGTaGCCTGGAATGATAAATGGA +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEATSSL*PGMING
Trigger: TCCATTTATCATTCCAGGGCACAGTGAGGAGGTGGC...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAACCAAAGAGTTCCACTaGGGACTTACTCATAACCCA +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVTKEFH*GLTHNP
Trigger: TGGGTTATGAGTAAGTCCCCAGTGGAACTCTTTGGT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAATGCTGGAGAACCTTGTaGGTGGAAGGCAGTGACATT +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAECWRTL*VEGSDI
Trigger: AATGTCACTGCCTTCCACCCACAAGGTTCTCCAGCA...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGAGAACACTTCCTTTCTTaGAGACATATGATGGCTAAT +
Preference number: 4 (lower is better)
Translates to: CVYFDSDHLPVLVVAVPGEHFLS*RHMMAN
Trigger: ATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTC...TCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp CTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATATTCAATTATACCTGTTTCAGGACAATCTaGCCCTCGCCTCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: LVRFSDRYSFPSVIFNYTCFRTI*PSPLAI
Trigger: AATAGCCAGAGGCGAGGGCCAGATTGTCCTGAAACA...GGTATAATTGAATATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
3UTR CAA 72 bp GCATTAAACATAGCATATGGAGTTCTTCCTCAGCTCTaGGCCTATCGTTGTATCTACAAACCAGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ALNIAYGVLPQL*AYRCIYKPEFF
Trigger: GAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGAACTCCATATGCTATGTTTAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTTTGGAACGCAATTTGTaGACCACAACTGAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFILERNL*TTTESV
Trigger: TACAGACTCAGTTGTGGTTCACAAATTGCGTTCCAA...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATAGCCTACGGAATCACTaGCTTTTTACACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNSLRNH*LFTQAP
Trigger: GGGAGCCTGTGTAAAAAGTCAGTGATTCCGTAGGCT...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAATAGCCCCAAGTGCTTaGCACTGTCTAAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEIAPSA*HCLSMS
Trigger: TGACATGCTTAGACAGTGTCAAGCACTTGGGGCTAT...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCATAAGCTCTGGAGGTaGACTGGTTCAGATTCTAGC +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESHKLWR*TGSDSS
Trigger: GCTAGAATCTGAACCAGTTCACCTCCAGAGCTTATG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATGATAGGATACTTGTTTaGTGGAGGCTTCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNDRILV*WRLHSA
Trigger: GGCGCTGTGAAGCCTCCAGCAAACAAGTATCCTATC...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAGGAGTCTGCCAAATCTaGTGCCTTCAGAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVGVCQI*CLQKSK
Trigger: TTTTGATTTCTGAAGGCAGCAGATTTGGCAGACTCC...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGTCTTTTTACTTGCATaGCTCACTAGCACCTCAGAT +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIVFLLA*LTSTSD
Trigger: ATCTGAGGTGCTAGTGAGGCATGCAAGTAAAAAGAC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTACCAGATGTTGGACCTaGTCAAGTCTCAGGAGACAA +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESTRCWT*SSLRRQ
Trigger: TTGTCTCCTGAGACTTGACCAGGTCCAACATCTGGT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATATTCAATTATACCTTGGGAAAGGTGGGGTaGGAAGGAAGAATTGTGAGT +
Preference number: 4 (lower is better)
Translates to: LVRFSDRYSFPSVIFNYTLGKVG*EGRIVS
Trigger: ACTCACAATTCTTCCTTCCCACCCCACCTTTCCCAA...GGTATAATTGAATATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATGCCCCTACACTAGTCTaGGCTCTCATTACCTTACTT +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNAPTLV*ALITLL
Trigger: AAGTAAGGTAATGAGAGCTCAGACTAGTGTAGGGGC...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCTCAGAGCCCAGAGATaGATATACATTTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESLRAQR*IYICWV
Trigger: AACCCAGCAAATGTATATGCATCTCTGGGCTCTGAG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATAAAGCTATGGTCAGGTaGTCACTCAGCTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNKAMVR*SLSWKC
Trigger: ACACTTCCAGCTGAGTGAGCACCTGACCATAGCTTT...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTACAGCTTATTCTCAAATaGCTGCTTCAAGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVQLILK*LLQVIL
Trigger: GAGGATTACTTGAAGCAGGCATTTGAGAATAAGCTG...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTTTCCGCTGGCACCTTaGCAAATATTTGGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNFPLAP*QIFGLE
Trigger: CTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTCTTTTAATCCTGCTGTaGTCTGTTTTACCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFILLILL*SVLPFP
Trigger: TGGAAAGGGTAAAACAGACCACAGCAGGATTAAAAG...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTACTCTCAAAGTATGGTTaGCATTTCCCCAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVLSKYG*HFPKFG
Trigger: ACCAAATTTGGGGAAATGCCAACCATACTTTGAGAG...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTGGCTATCATCCCAATaGTCACCTAAGTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESWLSSQ*SPKFSA
Trigger: GGCAGAAAACTTAGGTGACCATTGGGATGATAGCCA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAATTCAACTACAAACCGTaGATACGCGAAAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEFNYKP*IRERCS
Trigger: GGAACATCTTTCGCGTATTCACGGTTTGTAGTTGAA...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTACTGTTTCACAATCTCTaGATACCATGGCTACTAAAA +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVLFHNL*IPWLLK
Trigger: TTTTAGTAGCCATGGTATTCAGAGATTGTGAAACAG...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATGCTCTGTTGCTGAATTaGCTGGTAGCCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNALLLN*LVASKL
Trigger: AAGTTTACTGGCTACCAGGCAATTCAGCAACAGAGC...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATCACCTTCTTCCTCACTaGTTGCATCTGCAGTATTTC +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNHLLPH*LHLQYF
Trigger: GAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTG...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAGCAAGTAGGCACAACTaGTCATATTTATTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVASRHN*SYLFSQ
Trigger: TTGAGAGAATAAATATGAGCAGTTGTGCCTACTTGC...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTACCTGTGTCAATTGTaGTTTGCCTGCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNYLCQL*FACTIR
Trigger: CCTGATTGTGCAGGCAAAGCACAATTGACACAGGTA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp ATGAAGAGGAAAATAATGGAACCTGCCATAGAGACAAGCACCTATAGTGCACCTTTGTTCTGTAGTTTCTaGTTCAGTAATGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: MKRKIMEPAIETSTYSAPLFCSF*FSNAAY
Trigger: ATATGCAGCATTACTGAAGCAGAAACTACAGAACAA...AGGTGCACTATAGGTGCTTGTCTCTATGGCAGGTTCCATTATTTTCCTCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTTCTTCCTCAGCTCTTaGCCTATCGTTGTATCTACA +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESFFLSS*PIVVST
Trigger: TGTAGATACAACGATAGGCCAAGAGCTGAGGAAGAA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAATTAGCAAAAGACCCTaGCTATCATCCCAATGGTCA +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEISKRP*LSSQWS
Trigger: TGACCATTGGGATGATAGCCAGGGTCTTTTGCTAAT...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTAGAGTGAGTAGTTATTaGGGCCTTGATTTCAGACCA +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESRVSSY*GLDFRP
Trigger: TGGTCTGAAATCAAGGCCCCAATAACTACTCACTCT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAAAAATTAGCTGGGTGTaGTGGTGGGCATCTATAATC +
Preference number: 4 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEKISWV*WWASII
Trigger: GATTATAGATGCCCACCACCACACCCAGCTAATTTT...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp AGCATATGGAGTTCTTCCTCAGCTCTTGGCCTATCGTaGTATCTACAAACCAGAGTTCTTCATAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: SIWSSSSALGLS*YLQTRVLHKNK
Trigger: TTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGAACTCCATATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp CATGGATCACAATGTAGACAATCCACGTGCTGGTCCTaGGCAATACATCATGCTAATTTAATTTATATCTCC +
Preference number: 4 (lower is better)
Translates to: HGSQCRQSTCWS*AIHHANLIYIS
Trigger: GGAGATATAAATTAAATTAGCATGATGTATTGCCAAGGACCAGCACGTGGATTGTCTACATTGTGATCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTATGATACAAGCCTTCTaGGGAAATTTTCTGACAGGA +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESMIQAF*GNFLTG
Trigger: TCCTGTCAGAAAATTTCCTCAGAAGGCTTGTATCAT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTTAGACTGTTCAGTTTaGCAGCTGTTCAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESLDCSV*QLFSLT
Trigger: TGTCAAACTGAACAGCTGTCAAACTGAACAGTCTAA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTACACTTAACATCCTATaGCTTAGGAGAAAGCTATGG +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESTLNIL*LRRKLW
Trigger: CCATAGCTTTCTCCTAAGGCATAGGATGTTAAGTGT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAACATTTATTGCTCTTTaGTGGTTGTTTTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVTFIAL*WLFFLC
Trigger: GCAAAGGAAAAACAACCAGCAAAGAGCAATAAATGT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTTAGGAATTAATTCCTaGGTTCTGTCACAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESLGINS*VLSQRG
Trigger: TCCTCTCTGTGACAGAACCCAGGAATTAATTCCTAA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CCA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAAGAACACGGATAGTTaGGATACTAATGCAAATCTT +
Preference number: 4 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVKNTDS*DTNANL
Trigger: AAGATTTGCATTAGTATCCCAACTATCCGTGTTCTT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
3UTR CAA 72 bp CTTCTCATACGTGAGTACTTAAGAATATGTACATTCTaGCTCTGCACTGTATGTGTGAGCTATATGGTATTG +
Preference number: 4 (lower is better)
Translates to: LLIREYLRICTF*LCTVCVSYMVL
Trigger: CAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACGTATGAGAAG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATCCTTATGTTTCAGTGTaGGCAATGAAGAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNPYVSV*AMKRSF
Trigger: AAAAGACCTCTTCATTGCTCACACTGAAACATAAGG...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCTCTCTTCTCATACGTaGGTACTTAAGAATATGTAC +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESLSSHT*VLKNMY
Trigger: GTACATATTCTTAAGTACTCACGTATGAGAAGAGAG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR TCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCATTTGCTTCTGGTGTaGTTCATTGCTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESHLLLV*FIAKHL
Trigger: AAGATGTTTAGCAATGAATCACACCAGAAGCAAATG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR GCA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTATTCAGAACTCATCATaGATCCAACTGAACACGTTT +
Preference number: 4 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESIQNSS*IQLNTF
Trigger: AAACGTGTTCAGTTGGATGCATGATGAGTTCTGAAT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CCCTCTCCCAGGTGGCATCCCGGTGGAGAGTTACTGCCAGGCCAGGCAGGGCACTCACAGGTCTGTGGGTaGGGGCCACTCTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: PSPRWHPGGELLPGQAGHSQVCG*GPLCIR
Trigger: CCTGATGCAGAGTGGCCCCAACCCACAGACCTGTGA...GTGCCCTGCCTGGCCTGGCAGTAACTCTCCACCGGGATGCCACCTGGGAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp CAGGTCCTAGCTCGCTCACTCTGCGCCTCATTTGCCTTCTTGCTTTTCCTTGATACCAGGTCGCCCGCTTaGTACTCGCGGGGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: QVLARSLCASFAFLLFLDTRSPA*YSRGRG
Trigger: TCCGCGGCCCCGCGAGTACAAAGCGGGCGACCTGGT...ATCAAGGAAAAGCAAGAAGGCAAATGAGGCGCAGAGTGAGCGAGCTAGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563404.1
CDS-3UTR CAA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTACCAGGTCGCCCGCTTaGTACTCGCGGGGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: CVVARISTLRAAFVFLFFTRSPA*YSRGRG
Trigger: TCCGCGGCCCCGCGAGTACAAAGCGGGCGACCTGGT...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTGTAACCCTAGCACTTaGGGAGGACCAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQCNPST*GGPGRW
Trigger: CCACCTGCCTGGTCCTCCCAAAGTGCTAGGGTTACA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCAAGGTCGTGTGGCTGTaGACCCCTAAAGCCCATGCC +
Preference number: 5 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCKVVWL*TPKAHA
Trigger: GGCATGGGCTTTAGGGGTCAACAGCCACACGACCTT...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp CCAATGGCTGAGATGAGGCATAGGGCCAAGCCCATCAGCAACAGCATAGGGAGCCCTCGCCTCTGGCTATaGCCTCTCAGGCAGTGGACT +
Preference number: 5 (lower is better)
Translates to: PMAEMRHRAKPISNSIGSPRLWL*PLRQWT
Trigger: AGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGG...GCTCCCTATGCTGTTGCTGATGGGCTTGGCCCTATGCCTCATCTCAGCCATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCAGACTCACCATGGGCTaGGTAAGGAGCCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIRLTMG*VRSLPS
Trigger: GGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCATGTGGGATGTGGGTTaGATTCTGGGCAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCMWDVG*ILGSHL
Trigger: CAAGTGGCTGCCCAGAATCAAACCCACATCCCACAT...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TCCATCATGCATGCTGCCCCAGCCAAGCTGCTACCGGCCTTTGAGCACTTCCTGCGGGGTTTCAATATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SIMHAAPAKLLPAFEHFLRGFNM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATATTGAAACCCCG...CAGGAAGTGCTCAAAGGCCGGTAGCAGCTTGGCTGGGGCAGCATGCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TCTGGCCCTCGCCTCTGGCTATTGCCTCTCAGGCAGTGGACTCCACCCTCTCCCGTCACATATTCCTCCTaGGTTGTGAATACTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SGPRLWLLPLRQWTPPSPVTYSS*VVNTLS
Trigger: GCTCAGAGTATTCACAACCAAGGAGGAATATGTGAC...GGGAGAGGGTGGAGTCCACTGCCTGAGAGGCAATAGCCAGAGGCGAGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp CCTTCTCCCCCAGGTCCTAGCTCGCTCACTCTGCGCCTCATTTGCCTTCTTGCTCACTCTGCGCCTCATTaGCCTTCTTGCTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PSPPGPSSLTLRLICLLAHSAPH*PSCFSL
Trigger: CAAGGAAAAGCAAGAAGGCAAATGAGGCGCAGAGTG...AGCAAGAAGGCAAATGAGGCGCAGAGTGAGCGAGCTAGGACCTGGGGGAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563404.1
CDS-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGCTTCTTCCTCACTGCTaGCATCTGCAGTATTTCCAC +
Preference number: 5 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQLLPHC*HLQYFH
Trigger: GTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAAG...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATGTGTTTCTTGTGTCGTaGCCCGCATCTCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHVFLVS*PASPPS
Trigger: TGAGGGTGGAGATGCGGGCAACGACACAAGAAACAC...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGGTTCTTCCTCAGCTCTaGGCCTATCGTTGTATCTAC +
Preference number: 5 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQVLPQL*AYRCIY
Trigger: GTAGATACAACGATAGGCCAAGAGCTGAGGAAGAAC...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTCCACGTGCTGGTCCTaGGCAATACATCATGCTAAT +
Preference number: 5 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQSTCWS*AIHHAN
Trigger: ATTAGCATGATGTATTGCCAAGGACCAGCACGTGGA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CCAATGGCTGAGATGAGGCATAGGGCCAAGCCCATCAGCAACAGCATAGGGAGCTCCCTGTTCTGGTCGTaGCAGTTCCTGGACTATTGT +
Preference number: 5 (lower is better)
Translates to: PMAEMRHRAKPISNSIGSSLFWS*QFLDYC
Trigger: ACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA...GCTCCCTATGCTGTTGCTGATGGGCTTGGCCCTATGCCTCATCTCAGCCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTACCAGGTCGCCCGCTTaGTACTCGCGGGGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFITRSPA*YSRGRG
Trigger: TCCGCGGCCCCGCGAGTACAAAGCGGGCGACCTGGT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCTGAAGTTGTGTTTCTaGTGTCGTTGCCCGCATCTC +
Preference number: 5 (lower is better)
Translates to: WVKALGQTHHGLGKEPAILKLCF*CRCPHL
Trigger: GAGATGCGGGCAACGACACAAGAAACACAACTTCAG...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGTCATATTCTTCTCCATaGTGTTATCTCACCCACCCC +
Preference number: 5 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQSYSSP*CYLTHP
Trigger: GGGGTGGGTGAGATAACACAATGGAGAAGAATATGA...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp ACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCACACCTCACTTCTATGCTTCCTaGGCCACTCAGTTACTGGCT +
Preference number: 5 (lower is better)
Translates to: TCLFLALSTSLCSDPCTPHFYAS*ATQLLA
Trigger: AGCCAGTAACTGAGTGGCCAAGGAAGCATAGAAGTG...AGGTGTGCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp AGGCCCACATGCCTTTTCCTGGCTCTCTCCACTAGCCTGTGCTCTGACCCTTGCTGTCTGACACTTGTGTaGTCATCAGCAATCATTGGC +
Preference number: 5 (lower is better)
Translates to: RPTCLFLALSTSLCSDPCCLTLV*SSAIIG
Trigger: GCCAATGATTGCTGATGACAACACAAGTGTCAGACA...GCAAGGGTCAGAGCACAGGCTAGTGGAGAGAGCCAGGAAAAGGCATGTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp GGGCACATGTGGCCTTTTGTTCCTTCTGGGGAGAATGTGAATGCTGGACTCCTGCTGAAGTTGTGTTTCTaGTGTCGTTGCCCGCATCTC +
Preference number: 5 (lower is better)
Translates to: GHMWPFVPSGENVNAGLLLKLCF*CRCPHL
Trigger: GAGATGCGGGCAACGACACAAGAAACACAACTTCAG...CAGGAGTCCAGCATTCACATTCTCCCCAGAAGGAACAAAAGGCCACATGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGCTCAGTTTTCTCACATaGGTGCATCTCTTCATGCTA +
Preference number: 5 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQLSFLT*VHLFML
Trigger: TAGCATGAAGAGATGCACCAATGTGAGAAAACTGAG...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCCACAGCCAGAATGTTGCCATGAGTTaGCTGTTCATGAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LWDRLTMGLVRSLPSHSQNVAMS*LFMKVR
Trigger: CCTCACTTTCATGAACAGCAAACTCATGGCAACATT...CTGGCTGTGGGATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAGGTGCTGGAGAACCTaGTGGGTGGAAGGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQRCWRT*WVEGSD
Trigger: GTCACTGCCTTCCACCCACAAGGTTCTCCAGCACCT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATGTGGGATGTGGGTTTGATTCTGGGCAGCCACTTGTAGGGGAGTGGAGGATGTGTGAGGTGGCCTGCTaGGGAATCATTGAGATGAAT +
Preference number: 5 (lower is better)
Translates to: HVGCGFDSGQPLVGEWRMCEVAC*GIIEMN
Trigger: ATTCATCTCAATGATTCCCAAGCAGGCCACCTCACA...CATCCTCCACTCCCCTACAAGTGGCTGCCCAGAATCAAACCCACATCCCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS CCA 90 bp TTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGGAGGTCCAGCTaGGTGTGTAGAAGGGGTATTCTGTTAGTCTATCTCGATAATTGT +
Preference number: 5 (lower is better)
Translates to: LGRDGESCEHRWRSS*VCRRGILLVYLDNC
Trigger: ACAATTATCGAGATAGACTAACAGAATACCCCTTCTACACACCCAGCTGGACCTCCACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGTGTTTCTTGTGTCGTaGCCCGCATCTCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQVFLVS*PASPPS
Trigger: TGAGGGTGGAGATGCGGGCAACGACACAAGAAACAC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp AAAAAGAAGATAGGATACTTGTTTGCTGGAGGCTTCACAGCGCCCTCTGGGAGTGTGTTTCTTGTGTCGTaGCCCGCATCTCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: KKKIGYLFAGGFTAPSGSVFLVS*PASPPS
Trigger: TGAGGGTGGAGATGCGGGCAACGACACAAGAAACAC...ACTCCCAGAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATCCTATCTTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGCTCTTGGCCTATCGTaGTATCTACAAACCAGAGTT +
Preference number: 5 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIALGLS*YLQTRV
Trigger: AACTCTGGTTTGTAGATACAACGATAGGCCAAGAGC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCTTGTTTGAAGGTATTTaGCCTGCAGGTGAGACTGGT +
Preference number: 5 (lower is better)
Translates to: WVKALGQTHHGLGKEPAILFEGI*PAGETG
Trigger: ACCAGTCTCACCTGCAGGCAAAATACCTTCAAACAA...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCACTCAGTCTTTTTACTaGCATGCCTCACTAGCACCT +
Preference number: 5 (lower is better)
Translates to: WVKALGQTHHGLGKEPAITQSFY*HASLAP
Trigger: AGGTGCTAGTGAGGCATGCAAGTAAAAAGACTGAGT...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATGTGATGAGTGTTCCCTaGATGAGAGTACTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHVMSVP*MRVLRQ
Trigger: CTGCCTAAGTACTCTCATCAAGGGAACACTCATCAC...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp GTTCCCTTGATGAGAGTACTTAGGCAGGGATGGGGAGAGCTGCGAACACAGGTGTGTCATCAGCAATCATaGGCAGATTATGTGCCGAAC +
Preference number: 5 (lower is better)
Translates to: VPLMRVLRQGWGELRTQVCHQQS*ADYVPN
Trigger: GTTCGGCACATAATCTGCCAATGATTGCTGATGACA...CACCTGTGTTCGCAGCTCTCCCCATCCCTGCCTAAGTACTCTCATCAAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCTTGGAGACGTGGCTCTTAAGGCCTaGGCTTGGAGCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: CHQQSLADYVPNTSFLGDVALKA*AWSCPI
Trigger: GATGGGGCAGCTCCAAGCCAAGGCCTTAAGAGCCAC...GTCTCCAAGAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp GCCGAACACTTCCTTTCTTGGAGACATATGATGGCTAATCACCTGGGAGGCTTCCTGTTCTCTGACTCCTaGTTCTTGGACCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: AEHFLSWRHMMANHLGGFLFSDS*FLDQQL
Trigger: GAGCTGCTGGTCCAAGAACAAGGAGTCAGAGAACAG...GAAGCCTCCCAGGTGATTAGCCATCATATGTCTCCAAGAAAGGAAGTGTTCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TCCCTGTTCTGGTCGTTGCAGTTCCTGGACTATTGTAGGGGTTGCTGCCCTCATAATACTCTGAGCCCTTaGGTAACAGTGGCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SLFWSLQFLDYCRGCCPHNTLSP*VTVAAS
Trigger: ACTTGCAGCCACTGTTACCAAAGGGCTCAGAGTATT...ATGAGGGCAGCAACCCCTACAATAGTCCAGGAACTGCAACGACCAGAACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTCTGAAGTTGTGTTTCTaGTGTCGTTGCCCGCATCTC +
Preference number: 5 (lower is better)
Translates to: CVVARISTLRAAFVFLFFLKLCF*CRCPHL
Trigger: GAGATGCGGGCAACGACACAAGAAACACAACTTCAG...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CAA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTCTTCTTCCTCACTGCTaGCATCTGCAGTATTTCCAC +
Preference number: 5 (lower is better)
Translates to: CVVARISTLRAAFVFLFFLLPHC*HLQYFH
Trigger: GTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAAG...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CAA 90 bp CCAATGGCTGAGATGAGGCATAGGGCCAAGCCCATCAGCAACAGCATAGGGAGCATGACTTTTTCCGTTTaGAGCCTGCTTTTTCATTCT +
Preference number: 5 (lower is better)
Translates to: PMAEMRHRAKPISNSIGSMTFSV*SLLFHS
Trigger: AGAATGAAAAAGCAGGCTCAAAACGGAAAAAGTCAT...GCTCCCTATGCTGTTGCTGATGGGCTTGGCCCTATGCCTCATCTCAGCCATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGAGAGGGAGGCCATTTaGCAAATGCGGATAATGCTG +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQEREAI*QMRIML
Trigger: CAGCATTATCCGCATTTGCAAAATGGCCTCCCTCTC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGGACTCAACCTCACATaGCTAAATTCTGGAGAAATT +
Preference number: 5 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIGLNLT*LNSGEI
Trigger: AATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCGAATTGCTGTTAGGGTaGGATGAGGTAATACATGTA +
Preference number: 5 (lower is better)
Translates to: WVKALGQTHHGLGKEPAIELLLG*DEVIHV
Trigger: TACATGTATTACCTCATCCAACCCTAACAGCAATTC...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCCAATGGAAGAAATATaGAGTAGTGGCCAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQPMEEI*SSGQAQ
Trigger: CTGCGCCTGGCCACTACTCAATATTTCTTCCATTGG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TGGGTGAAAGCTTTGGGACAGACTCACCATGGGCTTGGTAAGGAGCCTGCCATCCTGATTCCTCAGTCCTaGGGGTTTATTTCTGTATTT +
Preference number: 5 (lower is better)
Translates to: WVKALGQTHHGLGKEPAILIPQS*GFISVF
Trigger: AAATACAGAAATAAACCCCAAGGACTGAGGAATCAG...GATGGCAGGCTCCTTACCAAGCCCATGGTGAGTCTGTCCCAAAGCTTTCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATAAGCTGCTACCGGCCTTaGAGCACTTCCTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVISCYRP*STSCAR
Trigger: CCTGGCACAGGAAGTGCTCAAAGGCCGGTAGCAGCT...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TGTGTTTATTTTGATAGTGACCACCTCCCTGTTCTGGTCGTTGCAGTTCCTGGATCACCATCCCTCCACTaGAAAGTGAAGCAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: CVYFDSDHLPVLVVAVPGSPSLH*KVKQLA
Trigger: AGCCAGCTGCTTCACTTTCAAGTGGAGGGATGGTGA...TCCAGGAACTGCAACGACCAGAACAGGGAGGTGGTCACTATCAAAATAAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAACCCTCACCTGCACTaGATTCTATTGTCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQNPHLH*ILLSAC
Trigger: GCAAGCTGACAATAGAATCAAGTGCAGGTGAGGGTT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGTACTCTCAAGGCATTTaGTCCTCAGAGCCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQYSQGI*SSEPRD
Trigger: ATCTCTGGGCTCTGAGGACAAAATGCCTTGAGAGTA...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCAAATAGCCCCAAGTGCTaGACACTGTCTAAGCATGTC +
Preference number: 5 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSNSPKC*TLSKHV
Trigger: GACATGCTTAGACAGTGTCAAGCACTTGGGGCTATT...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATCAGATTCTAGCCTGTaGCTGATGAGCACAATGACC +
Preference number: 5 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSSDSSL*LMSTMT
Trigger: GGTCATTGTGCTCATCAGCAACAGGCTAGAATCTGA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CAGGTCCTAGCTCGCTCACTCTGCGCCTCATTTGCCTTCTTGCTTTTCCTTGATGCCTCATTTGCCTTCTaGCTTTTCCTTGATTATGCT +
Preference number: 5 (lower is better)
Translates to: QVLARSLCASFAFLLFLDASFAF*LFLDYA
Trigger: AGCATAATCAAGGAAAAGCAAGAAGGCAAATGAGGC...ATCAAGGAAAAGCAAGAAGGCAAATGAGGCGCAGAGTGAGCGAGCTAGGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563404.1
CDS-3UTR CAA 90 bp GATACTTGTTTGCTGGAGGCTTCACAGCGCCCTCTGGGAGTTCATCAATCTCTTAAGAAGATAGGATACTaGTTTGCTGGAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: DTCLLEASQRPLGVHQSLKKIGY*FAGGFT
Trigger: TGTGAAGCCTCCAGCAAACAAGTATCCTATCTTCTT...AAGAGATTGATGAACTCCCAGAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGAAAGGGTATGAGCTCTaGCTGCAAGGAGTAGATGAA +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQKGYEL*LQGVDE
Trigger: TTCATCTACTCCTTGCAGCAAGAGCTCATACCCTTT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTCCTGAAGCCCCTCTCTaGATGGTGAATGCCCAGATC +
Preference number: 5 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIPEAPL*MVNAQI
Trigger: GATCTGGGCATTCACCATCAAGAGAGGGGCTTCAGG...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp ACTTGTGTTGTCATCAGCAATCATTGGCAGATTATGTGCCGAACACTTCCTTTCGGCACATGTGGCCTTTaGTTCCTTCTGGGGAGAATG +
Preference number: 5 (lower is better)
Translates to: TCVVISNHWQIMCRTLPFGTCGL*FLLGRM
Trigger: CATTCTCCCCAGAAGGAACAAAAGGCCACATGTGCC...GAAAGGAAGTGTTCGGCACATAATCTGCCAATGATTGCTGATGACAACACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TATTGGGGCCTTGATTTCAGACCATGTAGGAGTCTGCCAAATCTGCTGCCTTCATTATTAGCTATGTGCTaGGGAAGAGAAACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: YWGLDFRPCRSLPNLLPSLLAMC*GRETSS
Trigger: TGAGGAGGTTTCTCTTCCCAAGCACATAGCTAATAA...TGAAGGCAGCAGATTTGGCAGACTCCTACATGGTCTGAAATCAAGGCCCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAAACTGGGTGAAAGCTTaGGGACAGACTCACCATGGG +
Preference number: 5 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVNWVKA*GQTHHG
Trigger: CCCATGGTGAGTCTGTCCCAAAGCTTTCACCCAGTT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TGTGTCGTTGCCCGCATCTCCACCCTCAGAGCTGCTTTTGTTTTCCTCTTCTTTATCCTTTCCGTTTGTTaGACTTTCCAAACTTGTCTT +
Preference number: 5 (lower is better)
Translates to: CVVARISTLRAAFVFLFFILSVC*TFQTCL
Trigger: AAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGAT...AAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAACGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATATCTACCCAGGGGAGTaGTATCTGAGGGCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNIYPGE*YLRAES
Trigger: GGACTCGGCCCTCAGATACAACTCCCCTGGGTAGAT...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGGACCCTTTTTGTATTTaGACAGTCACAAGTCCATTG +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQDPFCI*TVTSPL
Trigger: CAATGGACTTGTGACTGTCAAAATACAAAAAGGGTC...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGATTTCAGTTTTGTACTaGTGTCTACAGAATAGCCCC +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQISVLY*CLQNSP
Trigger: GGGGCTATTCTGTAGACACAAGTACAAAACTGAAAT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAATCCATCACTGCCCAGTaGATAAGGCAGCCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAESITAQ*IRQPEA
Trigger: GGCTTCAGGCTGCCTTATCAACTGGGCAGTGATGGA...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp AGCCTGAATCATTGTCTTAAACTTAGTGGTCACTTCTATGCTTCCTTGGCCACTGCAGAGACCATGTCCTaGTCATTGCTAACACAGTGT +
Preference number: 5 (lower is better)
Translates to: SLNHCLKLSGHFYASLATAETMS*SLLTQC
Trigger: ACACTGTGTTAGCAATGACAAGGACATGGTCTCTGC...AGTGGCCAAGGAAGCATAGAAGTGACCACTAAGTTTAAGACAATGATTCAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp AAAAAGAAGATAGGATACTTGTTTGCTGGAGGCTTCACAGCGCCCTCTGGGAGTATGACTTTTTCCGTTTaGAGCCTGCTTTTTCATTCT +
Preference number: 5 (lower is better)
Translates to: KKKIGYLFAGGFTAPSGSMTFSV*SLLFHS
Trigger: AGAATGAAAAAGCAGGCTCAAAACGGAAAAAGTCAT...ACTCCCAGAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATCCTATCTTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000563790.5
CDS-3UTR CAA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTCAGGTGAGACTGGTTTaGAGGGCACAGAAACGTAGC +
Preference number: 5 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESQVRLV*RAQKRS
Trigger: GCTACGTTTCTGTGCCCTCAAAACCAGTCTCACCTG...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGACCTTATTGTCTCATTaGCCATTCCAATCATCCATT +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQTLLSH*PFQSSI
Trigger: AATGGATGATTGGAATGGCAAATGAGACAATAAGGT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGATTCCCAGTAAGAATTaGGAGATATGCCTTATGTTG +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQIPSKN*EICLML
Trigger: CAACATAAGGCATATCTCCAAATTCTTACTGGGAAT...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTATTGGTGAAGCTAAGCTaGCAGGTGGGCACTTATTAC +
Preference number: 5 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVLVKLS*QVGTYY
Trigger: GTAATAAGTGCCCACCTGCAAGCTTAGCTTCACCAA...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CATTCCTTTTCCGCTGGCACCTTGCCAAATATTTGGCCTAGAGTAGGTGTTCAGCTAGAAACTGTAGGCTaGTACAGTCAATTATATGCA +
Preference number: 5 (lower is better)
Translates to: HSFSAGTLPNIWPRVGVQLETVG*YSQLYA
Trigger: TGCATATAATTGACTGTACAAGCCTACAGTTTCTAG...CTGAACACCTACTCTAGGCCAAATATTTGGCAAGGTGCCAGCGGAAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp ATGCTCACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATAAGTGAAGCAGCTGGCTaGGAGATGCTAAGAAATGTG +
Preference number: 5 (lower is better)
Translates to: MLTTLVRFSDRYSFPSVISEAAG*EMLRNV
Trigger: CACATTTCTTAGCATCTCCAAGCCAGCTGCTTCACT...TATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGTGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTGAGATGCATATACATTaGCTGGGTTCTGCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESEMHIH*LGSAWA
Trigger: TGCCCAGGCAGAACCCAGCAAATGTATATGCATCTC...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTACAAACCCTAATCTGTaGGTGAAGCTAAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFITNPNL*VKLSLQ
Trigger: CTGCAAGCTTAGCTTCACCAACAGATTAGGGTTTGT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATATTCAATTATACCGAAAGCCATTGTCACTaGCACATCAGCCACCTGTCT +
Preference number: 5 (lower is better)
Translates to: LVRFSDRYSFPSVIFNYTESHCH*HISHLS
Trigger: AGACAGGTGGCTGATGTGCAAGTGACAATGGCTTTC...GGTATAATTGAATATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTAAGAAGATAGGATACTaGTTTGCTGGAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIKKIGY*FAGGFT
Trigger: TGTGAAGCCTCCAGCAAACAAGTATCCTATCTTCTT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATATTCAATTATACCCTTCTTCCTCACTGCTaGCATCTGCAGTATTTCCAC +
Preference number: 5 (lower is better)
Translates to: LVRFSDRYSFPSVIFNYTLLPHC*HLQYFH
Trigger: GTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAAG...GGTATAATTGAATATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAATACCCACTTCACTCTaGCCAGCCCTTTCTTTAGAG +
Preference number: 5 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEIPTSL*PALSLE
Trigger: CTCTAAAGAAAGGGCTGGCAAGAGTGAAGTGGGTAT...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp ACAACTCTGGTAAGATTCTCTGACAGGTATAGCTTTCCTTCTGTCATATTCAATTGGTCTGTTACAACTTaGAGTACACTGCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: TTLVRFSDRYSFPSVIFNWSVTT*STLQPQ
Trigger: CTGAGGCTGCAGTGTACTCAAAGTTGTAACAGACCA...ATTGAATATGACAGAAGGAAAGCTATACCTGTCAGAGAATCTTACCAGAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTGTGCTTAGCTCAAAATaGTATTGGCACTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIVLSSK*YWHWEK
Trigger: TTTTTCCCAGTGCCAATACAATTTTGAGCTAAGCAC...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTAGAATATGTACATTCTaGCTCTGCACTGTATGTGTG +
Preference number: 5 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIRICTF*LCTVCV
Trigger: CACACATACAGTGCAGAGCAAGAATGTACATATTCT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp CCCAGATTTTCTACAGTCGAGCACCAGATCATGAATGGGTATTTCAGTTTTGTAACTGGTACTGATATTTaGTCCCATTTCACTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PRFSTVEHQIMNGYFSFVTGTDI*SHFTLF
Trigger: GAAGAGAGTGAAATGGGACAAAATATCAGTACCAGT...TACAAAACTGAAATACCCATTCATGATCTGGTGCTCGACTGTAGAAAATCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGTAGTTATTGGGGCCTaGATTTCAGACCATGTAGGA +
Preference number: 5 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEVVIGA*ISDHVG
Trigger: TCCTACATGGTCTGAAATCAAGGCCCCAATAACTAC...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTATGACTTTTTCCGTTTaGAGCCTGCTTTTTCATTCT +
Preference number: 5 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIMTFSV*SLLFHS
Trigger: AGAATGAAAAAGCAGGCTCAAAACGGAAAAAGTCAT...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTATTTAACTGAGTGTTaGATGATGGTGGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESYLTEC*MMVGSR
Trigger: CCTTGACCCCACCATCATCAAACACTCAGTTAAATA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAATTTCCCATAGGGCTGTaGCTGATTCCAGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAEFPIGL*LIPALK
Trigger: TTTTAAAGCTGGAATCAGCAACAGCCCTATGGGAAA...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTTTTTCCTTTGCAGACCTCTAAATACCTGATTCCTCAGTCCTTGGGGTTTATTCAAGCATTAACAGGATaGATAAAACCCAAACTGACT +
Preference number: 5 (lower is better)
Translates to: VFPLQTSKYLIPQSLGFIQALTG*IKPKLT
Trigger: AGTCAGTTTGGGTTTTATCAATCCTGTTAATGCTTG...AATAAACCCCAAGGACTGAGGAATCAGGTATTTAGAGGTCTGCAAAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTTCTCTCAAAGTATGGTaGGCATTTCCCCAAATTTGG +
Preference number: 5 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESSLKVW*AFPQIW
Trigger: CCAAATTTGGGGAAATGCCAACCATACTTTGAGAGA...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAATGCCTGCATGTACATTaGCCATTTTACAAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: LAYRCIYKPEFFIKTKAECLHVH*PFYKEQ
Trigger: TTGCTCTTTGTAAAATGGCAAATGTACATGCAGGCA...TTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp TTATCCTTTCATGGAGACACTCACAGTAAAAAGGTCAAAAGGTCAAGAGAATCTATCCTTTCCGTTTGTTaGACTTTCCAAACTTGTCTT +
Preference number: 5 (lower is better)
Translates to: LSFHGDTHSKKVKRSRESILSVC*TFQTCL
Trigger: AAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGAT...AGATTCTCTTGACCTTTTGACCTTTTTACTGTGAGTGTCTCCATGAAAGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATATTAGACTGTTCAGTTaGACAGCTGTTCAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNIRLFS*TAVQFD
Trigger: GTCAAACTGAACAGCTGTCAAACTGAACAGTCTAAT...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTTTGATTTAAAAAGGTaGCCTGCATGTACATTTGCC +
Preference number: 5 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNFDLKR*PACTFA
Trigger: GGCAAATGTACATGCAGGCAACCTTTTTAAATCAAA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATCTTTGTAGACCCTTTTaGTATTTTGACAGTCACAAG +
Preference number: 5 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNLCRPF*YFDSHK
Trigger: CTTGTGACTGTCAAAATACAAAAAGGGTCTACAAAG...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS-3UTR CAA 90 bp GTGGAAGAAAAATTATTAGGGACTCAACCTCACATTGCTAAATTCTGGAGAAATTGGGATCTTATTTTGTaGCCCAGCTTATTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: VEEKLLGTQPHIAKFWRNWDLIL*PSLFSN
Trigger: ATTTGAGAATAAGCTGGGCAACAAAATAAGATCCCA...ATTTCTCCAGAATTTAGCAATGTGAGGTTGAGTCCCTAATAATTTTTCTTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299633.7
CDS CCA 72 bp AGGATACTTGTTTGCTGGAGGCTTCACAGCGCCCTCTaGGAGTTCATCAATCCGGGCCGGCCAGTGCGGGTA +
Preference number: 6 (lower is better)
Translates to: RILVCWRLHSAL*EFINPGRPVRV
Trigger: TACCCGCACTGGCCGGCCCGGATTGATGAACTCCCAGAGGGCGCTGTGAAGCCTCCAGCAAACAAGTATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299633.7
ENST00000568129.1
CDS CCA 72 bp GATGGGGAGAGCTGCGAACACAGGTGGAGGTCCAGCTaGGTGTGTAGAAGGGGTATTCTGTTAGTCTATCTC +
Preference number: 6 (lower is better)
Translates to: DGESCEHRWRSS*VCRRGILLVYL
Trigger: GAGATAGACTAACAGAATACCCCTTCTACACACCCAGCTGGACCTCCACCTGTGTTCGCAGCTCTCCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568294.5
CDS CAA 90 bp GGAGTTCATCAATCTCTTTCTAAGGATACAGATATGAAGACAGTTTaGACTTTCTGCCAAAAGTTCCAATCCGGGCCGGCCAGTGCGGGT +
Preference number: 6 (lower is better)
Translates to: GVHQSLSKDTDMKTV*TFCQKFQSGPASAG
Trigger: ACCCGCACTGGCCGGCCCGGATTGGAACTTTTGGCAGAAAGTCAAAACTGTCTTCATATCTGTATCCTTAGAAAGAGATTGATGAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563790.5