RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HDAC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000108840

Ensembl transcript IDs: ENST00000225983.10, ENST00000336057.9, ENST00000586339.1, ENST00000586802.5, ENST00000587135.1, ENST00000587776.1, ENST00000588261.1, ENST00000588419.1, ENST00000588703.5, ENST00000591714.5, ENST00000592385.5, ENST00000593013.5, ENST00000682912.1

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGGGACAGCGCCCAGCCCCCTCCTGGTCTTAGCTCCCTTGGGCTaGTGGTCAGCAAAGGGAGCCCAGAAGGTATGGAAGCTCCAGCTG +
Preference number: 1 (lower is better)
Translates to: EGTAPSPLLVLAPLG*WSAKGAQKVWKLQL
Trigger: CAGCTGGAGCTTCCATACCTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGGGCTGGGCGCTGTCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTaGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGGAAA +
Preference number: 1 (lower is better)
Translates to: SHFPSLVSYRLDGIP*KPCRPTAPGRAPGK
Trigger: TTTCCCAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR GCA 90 bp AAAGGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTaGATCTTAAAGACAGTAGTGGATCCTCCAGATCCTCCCCTGAGG +
Preference number: 1 (lower is better)
Translates to: KGWRIAGWVPTSPPL*ILKTVVDPPDPPLR
Trigger: CCTCAGGGGAGGATCTGGAGGATCCACTACTGTCTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR CCA 90 bp GAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTaGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGC +
Preference number: 1 (lower is better)
Translates to: EEEGRVSPLGATSHL*FPTGWMASPGSLVG
Trigger: GCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR GCA 90 bp CTCCCATCAGTGCTGAGACCAAGAGGAAGGAGGAGGAGAGGGGTCTaGAGAGATGGTGAGGACGAAAGAAGGGGAAAGGGTGGAGAATCG +
Preference number: 1 (lower is better)
Translates to: LPSVLRPRGRRRRGV*RDGEDERRGKGGES
Trigger: CGATTCTCCACCCTTTCCCCTTCTTTCGTCCTCACCATCTCTGCAGACCCCTCTCCTCCTCCTTCCTCTTGGTCTCAGCACTGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR CCA 90 bp CCAGAAGGTATGGAAGCTCCAGCTGAGAGCCGACTCCTGGATCCCTaGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCC +
Preference number: 1 (lower is better)
Translates to: PEGMEAPAESRLLDP*VLALPLLEPPFSPS
Trigger: GGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGGATCCAGGAGTCGGCTCTCAGCTGGAGCTTCCATACCTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCCCCAGGAGGGAGGTaGGCCTCTGCCCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRAPGGR*ASAPSP
Trigger: GGGAGAAGGGGCAGAGGCTCACCTCCCTCCTGGGGC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCCCTTGCCCAGGCTGTaGCAGCAGAGGGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLPLPRL*QQRGRE
Trigger: CTCCCTGCCCCTCTGCTGGCACAGCCTGGGCAAGGG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCAGGAGGGGCAAGGCTaGGAGACCCACACGGCACAC +
Preference number: 2 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGQEGQG*ETHTAH
Trigger: GTGTGCCGTGTGGGTCTCTCAGCCTTGCCCCTCCTG...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCAGGGAGGTGAGCCTCTaGCCCTTCTCCCCGCAGCAT +
Preference number: 2 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLREVSL*PFSPQH
Trigger: ATGCTGCGGGGAGAAGGGGCAGAGGCTCACCTCCCT...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGAGAGTACTGTCTaGGCCCCCGTGCCCACCTTG +
Preference number: 2 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLLESTV*APVPTL
Trigger: CAAGGTGGGCACGGGGGCCCAGACAGTACTCTCCAG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGAGGGAGGTGAGCCTCTaGCCCTTCTCCCCGCAGCAT +
Preference number: 2 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGREVSL*PFSPQH
Trigger: ATGCTGCGGGGAGAAGGGGCAGAGGCTCACCTCCCT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGACCACCTTCTCCCCTTaGCCAGGCTGTGCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGTTFSP*PGCASR
Trigger: TCTGCTGGCACAGCCTGGGCAAGGGGAGAAGGTGGT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGAGCCTGGAGCCCCTCTaGAGGGACCACCTTCTCCCC +
Preference number: 2 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKSLEPL*RDHLLP
Trigger: GGGGAGAAGGTGGTCCCTGCAGAGGGGCTCCAGGCT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGCTGGAGAGTACTGTCTaGGCCCCCGTGCCCACCTTG +
Preference number: 2 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRLESTV*APVPTL
Trigger: CAAGGTGGGCACGGGGGCCCAGACAGTACTCTCCAG...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCAGGAGGGGCAAGGCTaGGAGACCCACACGGCACAC +
Preference number: 2 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKQEGQG*ETHTAH
Trigger: GTGTGCCGTGTGGGTCTCTCAGCCTTGCCCCTCCTG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGCCCCAGGAGGGAGGTaGGCCTCTGCCCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGAPGGR*ASAPSP
Trigger: GGGAGAAGGGGCAGAGGCTCACCTCCCTCCTGGGGC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCTGCAGGCCACAGCTTaGGCACCAGCCTCCCATCAG +
Preference number: 2 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKLQATA*APASHQ
Trigger: CTGATGGGAGGCTGGTGCCCAAGCTGTGGCCTGCAG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGACCACCTTCTCCCCTTaGCCAGGCTGTGCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKTTFSP*PGCASR
Trigger: TCTGCTGGCACAGCCTGGGCAAGGGGAGAAGGTGGT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCTTCTGTTACTCCTCCTaGCCCCTGAGAACCCAGGAA +
Preference number: 2 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLFCYSS*PLRTQE
Trigger: TTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAA...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCGGGCTCTCACCAGCCTaGAGCCCCTCTGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSGLSPA*SPSAGT
Trigger: GGTCCCTGCAGAGGGGCTCCAGGCTGGTGAGAGCCC...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR CAA 90 bp GAGTGTGAGGCAAGACAGCCCTCCTCACAGACTGCAGGCCACAGCTaGGGCACCAGCCTCCCATCAGTGCTGAGACCAAGAGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: ECEARQPSSQTAGHS*GTSLPSVLRPRGRR
Trigger: CCTCCTTCCTCTTGGTCTCAGCACTGATGGGAGGCTGGTGCCCAAGCTGTGGCCTGCAGTCTGTGAGGAGGGCTGTCTTGCCTCACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCGCCCTCCTCACAGACTaGAGGCCACAGCTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSALLTD*RPQLGH
Trigger: GTGCCCAAGCTGTGGCCTGCAGTCTGTGAGGAGGGC...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCCCTTGCCCAGGCTGTaGCAGCAGAGGGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: QSKEWVYMRTRPATGREWPLPRL*QQRGRE
Trigger: CTCCCTGCCCCTCTGCTGGCACAGCCTGGGCAAGGG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCTTCTCCCCGCAGCATaGTGGATGGCTGGGAAAATC +
Preference number: 2 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKLLPAA*WMAGKI
Trigger: GATTTTCCCAGCCATCCAGCATGCTGCGGGGAGAAG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGGGCTCTCACCAGCCTaGAGCCCCTCTGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: QSKEWVYMRTRPATGREWGLSPA*SPSAGT
Trigger: GGTCCCTGCAGAGGGGCTCCAGGCTGGTGAGAGCCC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGAGCATGCTGGATGGCTaGGAAAATCTGGTCCTGACA +
Preference number: 2 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLSMLDG*ENLVLT
Trigger: TGTCAGGACCAGATTTTCCCAGCCATCCAGCATGCT...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGGGTCTGCAGAGATGGTaGGGACGAAAGAAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKGLQRW*GRKKGK
Trigger: TTTCCCCTTCTTTCGTCCTCACCATCTCTGCAGACC...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCGACACCACCACCCCCTaGAGAGGGAGCAGGCTTCTA +
Preference number: 2 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSDTTTP*RGSRLL
Trigger: TAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTC...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR CAA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTaGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: GGGRKSQPPRSHFPS*VSYRLDGIPWKPCR
Trigger: CCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGAATCGCAGGGTGGGTaGCCACCTCCCCTCCACTCT +
Preference number: 2 (lower is better)
Translates to: QSKEWVYMRTRPATGREWESQGG*PPPLHS
Trigger: AGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGAGCATGCTGGATGGCTaGGAAAATCTGGTCCTGACA +
Preference number: 2 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKSMLDG*ENLVLT
Trigger: TGTCAGGACCAGATTTTCCCAGCCATCCAGCATGCT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCCTCCCCGCAGCATGCTaGATGGCTGGGAAAATCTGG +
Preference number: 2 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSLPAAC*MAGKIW
Trigger: CCAGATTTTCCCAGCCATCCAGCATGCTGCGGGGAG...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCTTAGCTCCCTTGGGCTaGTGGTCAGCAAAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSLAPLG*WSAKGA
Trigger: GGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAA...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCTCCAGATCCTCCCCTaGGGCTGGAGAAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: RQSKEWVYMRTRPATGRELQILP*GWRREE
Trigger: CTCCTCCCTTCTCCAGCCTCAGGGGAGGATCTGGAG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGAATCGCAGGGTGGGTaGCCACCTCCCCTCCACTCT +
Preference number: 2 (lower is better)
Translates to: RQSKEWVYMRTRPATGREESQGG*PPPLHS
Trigger: AGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGCCCTCCTCACAGACTaGAGGCCACAGCTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: RQSKEWVYMRTRPATGREALLTD*RPQLGH
Trigger: GTGCCCAAGCTGTGGCCTGCAGTCTGTGAGGAGGGC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGACTTCTCCCCGCAGCATaGTGGATGGCTGGGAAAATC +
Preference number: 2 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGLLPAA*WMAGKI
Trigger: GATTTTCCCAGCCATCCAGCATGCTGCGGGGAGAAG...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCACAAAATCACAATGGTaGAGCCCAGAGGGATGGGGG +
Preference number: 2 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLTKSQW*SPEGWG
Trigger: CCCCCATCCCTCTGGGCTTCACCATTGTGATTTTGT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGGTCTGCAGAGATGGTaGGGACGAAAGAAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGGLQRW*GRKKGK
Trigger: TTTCCCCTTCTTTCGTCCTCACCATCTCTGCAGACC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGACAGAATGCAGGAAAATaGGGGGAGGGACACATGGGA +
Preference number: 2 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGQNAGK*GEGHMG
Trigger: TCCCATGTGTCCCTCCCCCCATTTTCCTGCATTCTG...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGCCATCCGAGTAAGGTaGGGAGCAGACCTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: QSKEWVYMRTRPATGREWAIRVR*GADLVL
Trigger: CAGAACCAGGTCTGCTCCCCACCTTACTCGGATGGC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCGACTCCTGGATCCCTaGGTTCTGGCCTTACCCCTT +
Preference number: 2 (lower is better)
Translates to: QSKEWVYMRTRPATGREWRLLDP*VLALPL
Trigger: AAGGGGTAAGGCCAGAACCCAGGGATCCAGGAGTCG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCACACTATGAACCGATaGTGCTGGGACTCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: QSKEWVYMRTRPATGREWHTMNR*CWDSCP
Trigger: GGGGCAGGAGTCCCAGCACCATCGGTTCATAGTGTG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR TCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTACAAAATCACAATGGTaGAGCCCAGAGGGATGGGGG +
Preference number: 2 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPTKSQW*SPEGWG
Trigger: CCCCCATCCCTCTGGGCTTCACCATTGTGATTTTGT...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGACTATGAACCGATGGTaGTGGGACTCCTGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: RQSKEWVYMRTRPATGRETMNRW*WDSCPS
Trigger: GGAGGGGCAGGAGTCCCAGCACCATCGGTTCATAGT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCAGAATGCAGGAAAATaGGGGGAGGGACACATGGGA +
Preference number: 2 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPQNAGK*GEGHMG
Trigger: TCCCATGTGTCCCTCCCCCCATTTTCCTGCATTCTG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGGTGGGGAGCAGACCTaGTTCTGTTACTCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: RQSKEWVYMRTRPATGREGGEQT*FCYSSW
Trigger: CCAGGAGGAGTAACAGAACCAGGTCTGCTCCCCACC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCTCCCCGCAGCATGCTaGATGGCTGGGAAAATCTGG +
Preference number: 2 (lower is better)
Translates to: RQSKEWVYMRTRPATGRELPAAC*MAGKIW
Trigger: CCAGATTTTCCCAGCCATCCAGCATGCTGCGGGGAG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAACCTCCCCTCCACTCTaGATCTTAAAGACAGTAGTG +
Preference number: 2 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGTSPPL*ILKTVV
Trigger: CACTACTGTCTTTAAGATGCAGAGTGGAGGGGAGGT...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCACCTCCCCTCCACTCTaGATCTTAAAGACAGTAGTG +
Preference number: 2 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSTSPPL*ILKTVV
Trigger: CACTACTGTCTTTAAGATGCAGAGTGGAGGGGAGGT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CAA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGACCACCTTCTCCCCTaGCCCAGGCTGTGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRDHLLP*PRLCQQ
Trigger: CTGCTGGCACAGCCTGGGCAAGGGGAGAAGGTGGTC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CAA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGTCTTAGCTCCCTaGGGCTGGTGGTCAGCAAAG +
Preference number: 3 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLLVLAP*GWWSAK
Trigger: CTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR-3UTR CAA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGCCCCCGTGCCCACCTaGAGCTGGCCCAGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: QSKEWVYMRTRPATGREWAPVPT*SWPRLQ
Trigger: TTGGAGCCTGGGCCAGCTCAAGGTGGGCACGGGGGC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
3UTR CCA 72 bp GGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTaGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGC +
Preference number: 3 (lower is better)
Translates to: GRVSPLGATSHL*FPTGWMASPGS
Trigger: GCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGGCAGCGGTGAGGACTaGGTGCGGCTCAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLGSGED*VRLRGR
Trigger: TCGGCCCCTGAGCCGCACTCAGTCCTCACCGCTGCC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCAGCTGTTGGGAGAGCTaGGGCCGGAGCCGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLSCWES*GRSRVR
Trigger: GCGCACCCGGCTCCGGCCCCAGCTCTCCCAACAGCT...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGGGAGGGCTCGGTGCTaGGGGAGCATCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLGRARC*GSISVG
Trigger: CCCCACTGAGATGCTCCCTCAGCACCGAGCCCTCCC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGGGTGGGTGGTGGGCTaGCTGGGCAGCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLGWVVG*LGSSPV
Trigger: GACAGGGGAGCTGCCCAGGCAGCCCACCACCCACCC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGCTGTGTTCCCGGGCTaGCGCAGCCTGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGAVFPG*RSLGLL
Trigger: GAGCAGGCCCAGGCTGCGGCAGCCCGGGAACACAGC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCAGCTGCTGCAGGGCCTaGGGACTCTGCGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLSCCRA*GLCGSG
Trigger: ACCGCTGCCGCAGAGTCCCCAGGCCCTGCAGCAGCT...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGAGCCCTCCCGGGGCATaGTCAGGGCTCCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGSPPGA*SGLPPP
Trigger: TGGGGGAGGGAGCCCTGACCATGCCCCGGGAGGGCT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGTACGGCCCAGGGCCTaGTGGGGCACAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGVRPRA*WGTVAR
Trigger: CCTGGCCACTGTGCCCCACCAGGCCCTGGGCCGTAC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGGGAGGGCTCGGTGCTaGGGGAGCATCTCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLGRARC*GSISVG
Trigger: CCCCACTGAGATGCTCCCTCAGCACCGAGCCCTCCC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGGCAGCGGTGAGGACTaGGTGCGGCTCAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELGSGED*VRLRGR
Trigger: TCGGCCCCTGAGCCGCACTCAGTCCTCACCGCTGCC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCTGCTGCTCCAGCTCCTaGTGCCGCTTGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLCCSSS*CRLAAS
Trigger: GCTGGCAGCCAAGCGGCAGCAGGAGCTGGAGCAGCA...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGAGCTCTTCCTGCCGCTaGTGCTCCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLSSSCR*CSRCRC
Trigger: GCAGCGGCAGCGGGAGCAGCAGCGGCAGGAAGAGCT...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGTGCAGCAGGGAGGCATaGCCGTGGGGGCTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRCSREA*PWGLPS
Trigger: CGACGGGAGCCCCCACGGGCATGCCTCCCTGCTGCA...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGCTGTGTTCCCGGGCTaGCGCAGCCTGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELAVFPG*RSLGLL
Trigger: GAGCAGGCCCAGGCTGCGGCAGCCCGGGAACACAGC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCCCTGCCGCAGGGACTaGAGGGCCTGCCTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKPCRRD*RACLSA
Trigger: GGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGCGGCTCCTCCATCTTTaGGGCGGCTCCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELRLLHL*GGSSGS
Trigger: GGAGCCGGAGGAGCCGCCGCAAAGATGGAGGAGCCG...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCGTTGGGAGAGTTCATaGCGGCTCTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLRWESS*RLWACR
Trigger: CCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGCCAGGAGCTCCTGCTaGAGTTGCTGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLARSSC*SCCSRS
Trigger: ACTGCGGGAGCAGCAACTGCAGCAGGAGCTCCTGGC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGACGCAGGAGGGGACTaGTTCTCCGCTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLDAGGD*FSAQPP
Trigger: AGGTGGCTGAGCGGAGAAGCAGTCCCCTCCTGCGTC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGACTTGCCGGTCAGCGTaGCACCCTGCCGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLTCRSA*HPAAGT
Trigger: AGTCCCTGCGGCAGGGTGGCACGCTGACCGGCAAGT...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGTGCAGCAGGGAGGCATaGCCGTGGGGGCTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVCSREA*PWGLPS
Trigger: CGACGGGAGCCCCCACGGGCATGCCTCCCTGCTGCA...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCGGCTCAGGGGCCGATaGCGCGGGAGCTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKRLRGR*RGSLPT
Trigger: GGTAGGCAAGCTCCCGCGGCATCGGCCCCTGAGCCG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCGGTGAGGACTGAGTaGGGCTCAGGGGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRAVRTE*GSGADA
Trigger: GGCATCGGCCCCTGAGCCGCACTCAGTCCTCACCGC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGGCAGCCCACTGCCATaGGCACAGCACTGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLGSPLP*AQHWRS
Trigger: ACTCCTCCAGTGCTGTGCGCATGGCAGTGGGCTGCC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCTGGGACGGGAGGGGGTaGAGCTGCGGTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLWDGRG*SCGDVK
Trigger: CTTGACATCACCGCAGCTCCACCCCCTCCCGTCCCA...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGCTGCTCCCGCAGTGTaGGGTCCACAGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGAAPAV*GPQSPP
Trigger: TGGTGGGCTCTGTGGACCCCACACTGCGGGAGCAGC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTACCGTCCGCATGCTaGTGGCCACACGTTCACCCG +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLLPSAC*WPHVHP
Trigger: CGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGAGCCCTCCCGGGGCATaGTCAGGGCTCCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVSPPGA*SGLPPP
Trigger: TGGGGGAGGGAGCCCTGACCATGCCCCGGGAGGGCT...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGCAGCAGGGGAGGACTaGGTACGGCCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVAAGED*VRPRAW
Trigger: CCAGGCCCTGGGCCGTACCCAGTCCTCCCCTGCTGC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGTGGATTCCTCGGCGTaGTGTCCTGGGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGVDSSA*CPGGRM
Trigger: CATCCGGCCCCCAGGACACCACGCCGAGGAATCCAC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGTCGGTCTCACCTGCTTaGGCCTCTCGCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLSVSPA*ASRRDR
Trigger: CCGGTCCCTGCGAGAGGCCCAAGCAGGTGAGACCGA...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGGCTCCTCTGCCGGCCTaGGGCTGTGTTCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKAPLPA*GCVPGL
Trigger: CAGCCCGGGAACACAGCCCCAGGCCGGCAGAGGAGC...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGGGCTCTCACCAGCCTaGAGCCCCTCTGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELGLSPA*SPSAGT
Trigger: GGTCCCTGCAGAGGGGCTCCAGGCTGGTGAGAGCCC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGTGGGAGGGAATGGTTaGGGCCGCCTGGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELVGGNG*GRLVWA
Trigger: AGCCCACACCAGGCGGCCTCAACCATTCCCTCCCAC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGGAACGGCATCCCCGCTaGGGCTCGAGCTCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKERHPR*GSSSGF
Trigger: GAAGCCGGAGCTCGAGCCGCAGCGGGGATGCCGTTC...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCGTTGGGAGAGTTCATaGCGGCTCTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLRWESS*RLWACR
Trigger: CCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCGCAGGATGAGCAGCTaGTGCTCCAGCCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGRRMSS*CSSRCF
Trigger: GAAGCAGCGGCTGGAGCAGCAGCTGCTCATCCTGCG...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGTCAGCGTGCCACCCTaGCGCAGGGACTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKVSVPP*RRDWRA
Trigger: GGCCCTCCAGTCCCTGCGGCAGGGTGGCACGCTGAC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGATGAGGGTGCTCTGCTaGCGGGCCTGCTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGMRVLC*RACSSN
Trigger: GTTGCTGGAGCAGGCCCGGCAGCAGAGCACCCTCAT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCCCAGCAAGACCTCCTaGTGCTCCGTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGPSKTS*CSVSSS
Trigger: GGAGGAGCTGACGGAGCAGCAGGAGGTCTTGCTGGG...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCAGCAGGCAGCCCACTaGCATGCGCACAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLQQAAH*HAHSTG
Trigger: TCCAGTGCTGTGCGCATGGCAGTGGGCTGCCTGCTG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCAGCAGGCAGCCCACTaGCATGCGCACAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGQQAAH*HAHSTG
Trigger: TCCAGTGCTGTGCGCATGGCAGTGGGCTGCCTGCTG...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCCCTTGCCCAGGCTGTaGCAGCAGAGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKPLPRL*QQRGRE
Trigger: CTCCCTGCCCCTCTGCTGGCACAGCCTGGGCAAGGG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGCCCTTGCCCAGGCTGTaGCAGCAGAGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVPLPRL*QQRGRE
Trigger: CTCCCTGCCCCTCTGCTGGCACAGCCTGGGCAAGGG...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGCAGGAAGCTGGCGTTaGGGGCTGGGACGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKAGSWR*GLGREG
Trigger: CCCCTCCCGTCCCAGCCCCCAACGCCAGCTTCCTGC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGGGCCTGCAGGAAGCTaGCGTTGGGGGCTGGGACGG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKGPAGS*RWGLGR
Trigger: CCGTCCCAGCCCCCAACGCCAGCTTCCTGCAGGCCC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGAGTTCATGCCGGCTCTaGGCCTGCAGGAAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLSSCRL*ACRKLA
Trigger: CGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACT...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTGCTCCCGCAGTGTaGGGTCCACAGAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRAAPAV*GPQSPP
Trigger: TGGTGGGCTCTGTGGACCCCACACTGCGGGAGCAGC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGTCTCCTCAGGGTGGGTaGTGGGCTGCCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRSPQGG*WAAWAA
Trigger: AGCTGCCCAGGCAGCCCACCACCCACCCTGAGGAGA...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGTGCTCTCACTCTCTGTaGAGCCCTCCCGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGCSHSL*SPPGAW
Trigger: CCATGCCCCGGGAGGGCTCCACAGAGAGTGAGAGCA...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGTCGGTCTCACCTGCTTaGGCCTCTCGCAGGGACCGG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELSVSPA*ASRRDR
Trigger: CCGGTCCCTGCGAGAGGCCCAAGCAGGTGAGACCGA...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCTCTCCTGCTGCTGCTTaGGGTGCTTCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLSPAAA*GASAAG
Trigger: TCCAGCTGCAGAAGCACCTCAAGCAGCAGCAGGAGA...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGGAGTGGCACAGCAATaGGGGTGCTCTGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVGVAQQ*GCSAAG
Trigger: CCCGGCAGCAGAGCACCCTCATTGCTGTGCCACTCC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGACTCTGCGGCAGCGGTaGGGACTGAGTGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKTLRQR*GLSAAQ
Trigger: CTGAGCCGCACTCAGTCCTCACCGCTGCCGCAGAGT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGCTCCAGATCCTCCCCTaGGGCTGGAGAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRLQILP*GWRREE
Trigger: CTCCTCCCTTCTCCAGCCTCAGGGGAGGATCTGGAG...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCGGCTCCTCCATCTTTaGGGCGGCTCCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKRLLHL*GGSSGS
Trigger: GGAGCCGGAGGAGCCGCCGCAAAGATGGAGGAGCCG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGTGCCGGCTCTGGGCCTaGAGGAAGCTGGCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKCRLWA*RKLALG
Trigger: CCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCA...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCTGCTGCTGCTTGGCTaGCAGCATCTCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLLLLLG*QHLLLL
Trigger: CAGCAGCAGGAGATGCTGGCAGCCAAGCAGCAGCAG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGACGCAGGAGGGGACTaGTTCTCCGCTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRDAGGD*FSAQPP
Trigger: AGGTGGCTGAGCGGAGAAGCAGTCCCCTCCTGCGTC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGAGGGACTGGAGGGCCTaGCTCTCGGCCTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKRDWRA*LSASCC
Trigger: ACAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCTACACCTGCAAAGGCTaGAGCGGCTGGGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLYTCKG*SGWASE
Trigger: CTCAGATGCCCAGCCGCTGCAGCCTTTGCAGGTGTA...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCCTGTGGTGAAGAGGTaGTTGACGGGCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLPVVKR*LTGWSG
Trigger: CCCAGACCAGCCCGTCAAGCACCTCTTCACCACAGG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGGAGGTGAGCCTCTaGCCCTTCTCCCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELREVSL*PFSPQH
Trigger: ATGCTGCGGGGAGAAGGGGCAGAGGCTCACCTCCCT...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGCATTTGGGGTGCTGTaGGAGGGAATGGTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLAFGVL*EGMVEA
Trigger: GGCCTCAACCATTCCCTCCCACAGCACCCCAAATGC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGAGGGAGCATCTCAGTaGGGATGTTGGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLEGASQ*GCWGLS
Trigger: GCTCAGTCCCCAACATCCCCACTGAGATGCTCCCTC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGAGTGGGGACTGCCCGTaGAGTGGCACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLSGDCP*SGTAMR
Trigger: CCTCATTGCTGTGCCACTCCACGGGCAGTCCCCACT...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGCCGTCCGCATGCTGGTaGCCACACGTTCACCCGTCA +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRPSACW*PHVHPS
Trigger: TGACGGGTGAACGTGTGGCCACCAGCATGCGGACGG...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGAGCTGCTGCAGGGCCTaGGGACTCTGCGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKSCCRA*GLCGSG
Trigger: ACCGCTGCCGCAGAGTCCCCAGGCCCTGCAGCAGCT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGTCTGTCTCCTCAGGGTaGGTGGTGGGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVSVSSG*VVGCLG
Trigger: GCCCAGGCAGCCCACCACCCACCCTGAGGAGACAGA...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGAGGCTGAGGGGCGCCTaGTACACCTGCAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRRLRGA*YTCKGC
Trigger: GCAGCCTTTGCAGGTGTACCAGGCGCCCCTCAGCCT...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGCTGGAGAGTACTGTCTaGGCCCCCGTGCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELLESTV*APVPTL
Trigger: CAAGGTGGGCACGGGGGCCCAGACAGTACTCTCCAG...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGCCATCCGAGTAAGGTaGGGAGCAGACCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLAIRVR*GADLVL
Trigger: CAGAACCAGGTCTGCTCCCCACCTTACTCGGATGGC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGGGCTCTCACCAGCCTaGAGCCCCTCTGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKGLSPA*SPSAGT
Trigger: GGTCCCTGCAGAGGGGCTCCAGGCTGGTGAGAGCCC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCGACTCCTGGATCCCTaGGTTCTGGCCTTACCCCTT +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLRLLDP*VLALPL
Trigger: AAGGGGTAAGGCCAGAACCCAGGGATCCAGGAGTCG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGCCCTGGCAGGGCTCCTaGGAAAGAGAAGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRPWQGS*EREGTA
Trigger: CGCTGTCCCTTCTCTTTCCCAGGAGCCCTGCCAGGG...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGGGGTGGAGCTGCGGTaGTGTCAAGAGAGACAGACG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELGVELR*CQERQT
Trigger: CGTCTGTCTCTCTTGACATCACCGCAGCTCCACCCC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGAGACGTGTAGAGGCTaGACTGGTTGGGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGETCRG*TGWGSC
Trigger: ACAGCTCCCCCAACCAGTTCAGCCTCTACACGTCTC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGGAGGCAGTGAGGTGTaGGTTGGTGACAGTGACCGT +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLGGSEV*VGDSDR
Trigger: ACGGTCACTGTCACCAACTCACACCTCACTGCCTCC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGCTCCCCTGTCTTGGTaGGGATCTTGCCCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGAPLSW*GSCPAV
Trigger: TACAGCTGGGCAAGATCCTCACCAAGACAGGGGAGC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGCTGCAGCTCTACACTaGGCAGAGCCGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGAAALH*AEPRHK
Trigger: CTTGTGTCTCGGCTCTGCTCAGTGTAGAGCTGCAGC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCTCCAGATCCTCCCCTaGGGCTGGAGAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKLQILP*GWRREE
Trigger: CTCCTCCCTTCTCCAGCCTCAGGGGAGGATCTGGAG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGTATGGAAGCTCCAGCTaGGAGCCGACTCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGYGSSS*EPTPGS
Trigger: GGATCCAGGAGTCGGCTCTCAGCTGGAGCTTCCATA...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGGGAGGGGGTGGAGCTaGGGTGATGTCAAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELGRGWS*GDVKRD
Trigger: GTCTCTCTTGACATCACCGCAGCTCCACCCCCTCCC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGCCAGGAGCTCCTGCTaGAGTTGCTGCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVARSSC*SCCSRS
Trigger: ACTGCGGGAGCAGCAACTGCAGCAGGAGCTCCTGGC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGTGCAGCTGCTGCTGCTaGTTGAGCGCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVCSCCC*LSARSS
Trigger: GGAGCTCCTGGCGCTCAAGCAGCAGCAGCAGCTGCA...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTGCAGCTGCTGCTGCTaGTTGAGCGCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKCSCCC*LSARSS
Trigger: GGAGCTCCTGGCGCTCAAGCAGCAGCAGCAGCTGCA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCAGCTGGACCTCATGCTaGCTTGTCAGGTGGTCATGC +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLSWTSC*LVRWSC
Trigger: GCATGACCACCTGACAAGGCAGCATGAGGTCCAGCT...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCTGCAGCTGGACCTCATaGTGCCTTGTCAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLCSWTS*CLVRWS
Trigger: TGACCACCTGACAAGGCAGCATGAGGTCCAGCTGCA...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGCCAGCATCTCCTGCTaGTGCTTGAGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLASISC*CLRCFC
Trigger: GCAGAAGCACCTCAAGCAGCAGCAGGAGATGCTGGC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGCTGCTGCTGCTTGGCTaGCAGCATCTCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRLLLLG*QHLLLL
Trigger: CAGCAGCAGGAGATGCTGGCAGCCAAGCAGCAGCAG...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGTGCCTCTCGGCCTCCTaGTGTGTCGACAGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVCLSAS*CVDSFG
Trigger: CCCGAAGCTGTCGACACAGCAGGAGGCCGAGAGGCA...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGATGAGGGTGCTCTGCTaGCGGGCCTGCTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVMRVLC*RACSSN
Trigger: GTTGCTGGAGCAGGCCCGGCAGCAGAGCACCCTCAT...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCCGGCTCAGGGGCCGATaGCGCGGGAGCTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLRLRGR*RGSLPT
Trigger: GGTAGGCAAGCTCCCGCGGCATCGGCCCCTGAGCCG...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTGCATGACCAGCTGCTaGAGGGCCTGGGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKCMTSC*RAWGLC
Trigger: GCAGAGTCCCCAGGCCCTGCAGCAGCTGGTCATGCA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGTGTTGCATGACCAGCTaGTGCAGGGCCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELCCMTS*CRAWGL
Trigger: GAGTCCCCAGGCCCTGCAGCAGCTGGTCATGCAACA...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGGCGCCTGGTACACCTaGAAAGGCTGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKGAWYT*KGCSGW
Trigger: CCAGCCGCTGCAGCCTTTGCAGGTGTACCAGGCGCC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGCATCTAGCGTGGCTTTaGGACCTCGGATCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRHLAWL*DLGSAR
Trigger: GCGAGCGGATCCGAGGTCGCAAAGCCACGCTAGATG...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR GCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCCAGCGGCGAACTTCTaGACACAGCTCCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLPAANF*TQLQCL
Trigger: CAAACACTGGAGCTGTGTGCAGAAGTTCGCCGCTGG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGGAATCGCAGGGTGGGTaGCCACCTCCCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKESQGG*PPPLHS
Trigger: AGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTC...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGCCCTCCTCACAGACTaGAGGCCACAGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVALLTD*RPQLGH
Trigger: GTGCCCAAGCTGTGGCCTGCAGTCTGTGAGGAGGGC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGAGCCTGGAGCCCCTCTaGAGGGACCACCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKSLEPL*RDHLLP
Trigger: GGGGAGAAGGTGGTCCCTGCAGAGGGGCTCCAGGCT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGACTATGAACCGATGGTaGTGGGACTCCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLTMNRW*WDSCPS
Trigger: GGAGGGGCAGGAGTCCCAGCACCATCGGTTCATAGT...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGAGGGAGCATCTCAGTaGGGATGTTGGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLEGASQ*GCWGLS
Trigger: GCTCAGTCCCCAACATCCCCACTGAGATGCTCCCTC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGTCTCCTCAGGGTGGGTaGTGGGCTGCCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKSPQGG*WAAWAA
Trigger: AGCTGCCCAGGCAGCCCACCACCCACCCTGAGGAGA...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGCTCGGCGTGGTGTCCTaGGGGCCGGATGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVLGVVS*GPDDGK
Trigger: TTTGCCATCATCCGGCCCCCAGGACACCACGCCGAG...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCAGAGGCATCACAGATaGCGGTCAAGTCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLQRHHR*RSSHGL
Trigger: GAGGCCATGACTTGACCGCCATCTGTGATGCCTCTG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGCCGACAGCAAGGCCATaGCGCTCACAGTCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVPTARP*RSQSRP
Trigger: AGGCCGAGACTGTGAGCGCCATGGCCTTGCTGTCGG...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGCCATCCGAGTAAGGTaGGGAGCAGACCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGAIRVR*GADLVL
Trigger: CAGAACCAGGTCTGCTCCCCACCTTACTCGGATGGC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCTCCCCGCAGCATGCTaGATGGCTGGGAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLLPAAC*MAGKIW
Trigger: CCAGATTTTCCCAGCCATCCAGCATGCTGCGGGGAG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGGAGCCCAGAAGGTATaGAAGCTCCAGCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLGAQKV*KLQLRA
Trigger: GGCTCTCAGCTGGAGCTTCCATACCTTCTGGGCTCC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGTTAGCTCCCTTGGGCTaGTGGTCAGCAAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLLAPLG*WSAKGA
Trigger: GGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAA...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGGGTGCTGTTGTTGCATaGCCAGCTGCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKGAVVA*PAAAGP
Trigger: AGGCCCTGCAGCAGCTGGTCATGCAACAACAGCACC...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGCACAGTGGCCAGGCTaGGGGGCGCCTGGTACACCT +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLAQWPG*GAPGTP
Trigger: AGGTGTACCAGGCGCCCCTCAGCCTGGCCACTGTGC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGTGCCATTGCCATGGTaGATGTCCCAGTCCACGATG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGVPLPW*MSQSTM
Trigger: CATCGTGGACTGGGACATTCACCATGGCAATGGCAC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCGTGGCCACTGCGTTaGTGTTGGGCTTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRAWPLR*CWAFAA
Trigger: TGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGTATGGAAGCTCCAGCTaGGAGCCGACTCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELYGSSS*EPTPGS
Trigger: GGATCCAGGAGTCGGCTCTCAGCTGGAGCTTCCATA...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGAACGGCATCCCCGCTaGGGCTCGAGCTCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLERHPR*GSSSGF
Trigger: GAAGCCGGAGCTCGAGCCGCAGCGGGGATGCCGTTC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGATGCCGGCTCTGGGCCTaGAGGAAGCTGGCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGCRLWA*RKLALG
Trigger: CCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCA...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGTCACAGGGATGCTGTaGAGAGAAGTCCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVVTGML*REVRGR
Trigger: CCTGCCGCGGACTTCTCTGCACAGCATCCCTGTGAC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGCCACTGTCACAGGGATaGTGTGCAGAGAAGTCCGCG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELPLSQG*CAEKSA
Trigger: CGCGGACTTCTCTGCACAGCATCCCTGTGACAGTGG...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGTCCTGCTGCAGTTGCTaGTCCCGCAGTGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKSCCSC*SRSVGS
Trigger: GGACCCCACACTGCGGGAGCAGCAACTGCAGCAGGA...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGAGCTGCTTCTGCAGCTaGTGCTGCTGCTTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKSCFCS*CCCLSA
Trigger: GGCGCTCAAGCAGCAGCAGCAGCTGCAGAAGCAGCT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGTCAGCGAACAGGAGCTaGTTCTGCAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELSANRS*FCSCCC
Trigger: GCAGCAGCAGCTGCAGAAGCAGCTCCTGTTCGCTGA...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTGCCAGCATCTCCTaGTGCTGCTTGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRAASIS*CCLRCF
Trigger: GAAGCACCTCAAGCAGCAGCAGGAGATGCTGGCAGC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGCCCCAGCATTTGGGGTaGTGTGGGAGGGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELPQHLG*CGREWL
Trigger: CAACCATTCCCTCCCACAGCACCCCAAATGCTGGGG...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGGGGCCGGAGCCGGGTaGGCTGTTACACACGGACGA +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGGAGAG*AVTHGR
Trigger: TCGTCCGTGTGTAACAGCGCACCCGGCTCCGGCCCC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGTCAGCGTGCCACCCTaGCGCAGGGACTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPVSVPP*RRDWRA
Trigger: GGCCCTCCAGTCCCTGCGGCAGGGTGGCACGCTGAC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCTCTGCTGCCGGGCCTaGTCCAGCAACAGCACATGC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKLCCRA*SSNSTC
Trigger: GCATGTGCTGTTGCTGGAGCAGGCCCGGCAGCAGAG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGTCACTAGTGGGGACTaGCCGTGGAGTGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVVTSGD*PWSGTA
Trigger: TGCTGTGCCACTCCACGGGCAGTCCCCACTAGTGAC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCGCGGTGAGGACTGAGTaGGGCTCAGGGGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSAVRTE*GSGADA
Trigger: GGCATCGGCCCCTGAGCCGCACTCAGTCCTCACCGC...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTGTTGCATGACCAGCTaGTGCAGGGCCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKCCMTS*CRAWGL
Trigger: GAGTCCCCAGGCCCTGCAGCAGCTGGTCATGCAACA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGAGCTGCTGCTGCTTCTaGTTCTCCAGGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGSCCCF*FSRNCW
Trigger: CCAGCAGTTCCTGGAGAAGCAGAAGCAGCAGCAGCT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGTTGCCCAGCTGTAGCTaGTGCTGCTTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLLPSCS*CCFCFS
Trigger: GGAGAAGCAGAAGCAGCAGCAGCTACAGCTGGGCAA...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTGGATCCGGCCAGCATaGTCAGGGTGCACGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKWIRPA*SGCTCV
Trigger: CACACACGTGCACCCTGAGCATGCTGGCCGGATCCA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGCCAGGGTCATCAGCTaGCTGGTCAAGTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGARVIS*LVKWPK
Trigger: TTTTGGCCACTTGACCAGGCAGCTGATGACCCTGGC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCCACCACCCGGCCCCCTaGCAGGGTCATCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSHHPAP*QGHQLP
Trigger: AGGCAGCTGATGACCCTGGCAGGGGGCCGGGTGGTG...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGCCTCATCCAAGGGCTaGAGCTCTACACTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLASSKG*SSTLSR
Trigger: TCTGCTCAGTGTAGAGCTGCAGCCCTTGGATGAGGC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCTCCTCGGTCTCACCTaGTTGGGCCTCTCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKLLGLT*LGLSQG
Trigger: TCCCTGCGAGAGGCCCAAGCAGGTGAGACCGAGGAG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGTGGCTCCCTCAATCCTaGTCAGGCCCCCATAGGATA +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLWLPQS*SGPHRI
Trigger: TATCCTATGGGGGCCTGAGCAGGATTGAGGGAGCCA...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGCATCTGCCGACTCGTTaGGAGAGTTCATGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELHLPTR*ESSCRL
Trigger: GAGCCGGCATGAACTCTCCCAACGAGTCGGCAGATG...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTGCTGTGGGAGGGAATaGTTGAGGCCGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKCCGRE*LRPPGV
Trigger: CACACCAGGCGGCCTCAACCATTCCCTCCCACAGCA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCCCTGCCGCAGGGACTaGAGGGCCTGCCTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWPCRRD*RACLSA
Trigger: GGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGAGTGGGGACTGCCCGTaGAGTGGCACAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVSGDCP*SGTAMR
Trigger: CCTCATTGCTGTGCCACTCCACGGGCAGTCCCCACT...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGCAGCAGGGGAGGACTaGGTACGGCCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPAAGED*VRPRAW
Trigger: CCAGGCCCTGGGCCGTACCCAGTCCTCCCCTGCTGC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGGATCTCATCTAGCGTaGCTTTGCGACCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGGSHLA*LCDLGS
Trigger: GGATCCGAGGTCGCAAAGCCACGCTAGATGAGATCC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCCATGCGCACAGCACTaGAGGAGTGCATCTCATTCC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGPCAQH*RSASHS
Trigger: GGAATGAGATGCACTCCTCCAGTGCTGTGCGCATGG...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGATTGTACCCCACGCCTaGTCCTCCACCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGIVPHA*SSTNLF
Trigger: GAAGAGGTTGGTGGAGGACCAGGCGTGGGGTACAAT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGATGGCGGTCAAGTCATaGCCTCCCTCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKMAVKS*PPSRAS
Trigger: GCTGGCCCTGGAGGGAGGCCATGACTTGACCGCCAT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGCTCCTCTGCCGGCCTaGGGCTGTGTTCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPAPLPA*GCVPGL
Trigger: CAGCCCGGGAACACAGCCCCAGGCCGGCAGAGGAGC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCTGCAGGCCACAGCTTaGGCACCAGCCTCCCATCAG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKLQATA*APASHQ
Trigger: CTGATGGGAGGCTGGTGCCCAAGCTGTGGCCTGCAG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGCTCCCCGCAGCATGCTaGATGGCTGGGAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELLPAAC*MAGKIW
Trigger: CCAGATTTTCCCAGCCATCCAGCATGCTGCGGGGAG...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGTTAGCTCCCTTGGGCTaGTGGTCAGCAAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELLAPLG*WSAKGA
Trigger: GGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAA...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGTGGTTTCCTACAGGCTaGATGGCATCCCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGWFPTG*MASPGS
Trigger: GCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCA...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGTCCCATCCGACTCGTTaGGAGAGTTCATGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRSHPTR*ESSCRL
Trigger: GAGCCGGCATGAACTCTCCCAACGAGTCGGATGGGA...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGTGGGAGGGAATGGTTaGGGCCGCCTGGTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGVGGNG*GRLVWA
Trigger: AGCCCACACCAGGCGGCCTCAACCATTCCCTCCCAC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGGAGACGTGTAGAGGCTaGACTGGTTGGGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKETCRG*TGWGSC
Trigger: ACAGCTCCCCCAACCAGTTCAGCCTCTACACGTCTC...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCGGAGTGGCACAGCAATaGGGGTGCTCTGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSGVAQQ*GCSAAG
Trigger: CCCGGCAGCAGAGCACCCTCATTGCTGTGCCACTCC...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGCTCCCCTGTCTTGGTaGGGATCTTGCCCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVAPLSW*GSCPAV
Trigger: TACAGCTGGGCAAGATCCTCACCAAGACAGGGGAGC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCTAGCTTCTGCCGGTTaGGGGGACTGGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKLASAG*GDWSHR
Trigger: TCTATGGGACCAGTCCCCTCAACCGGCAGAAGCTAG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR TCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGACAAAATCACAATGGTaGAGCCCAGAGGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGTKSQW*SPEGWG
Trigger: CCCCCATCCCTCTGGGCTTCACCATTGTGATTTTGT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGACAGGAGGGGCAAGGCTaGGAGACCCACACGGCACAC +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGQEGQG*ETHTAH
Trigger: GTGTGCCGTGTGGGTCTCTCAGCCTTGCCCCTCCTG...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGCCCCAGGAGGGAGGTaGGCCTCTGCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWAPGGR*ASAPSP
Trigger: GGGAGAAGGGGCAGAGGCTCACCTCCCTCCTGGGGC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGAGGAGTGGGTTTACATaGGAACCAGACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLRSGFT*EPDQPQ
Trigger: CTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCT...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGTCAGCGAACAGGAGCTaGTTCTGCAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVSANRS*FCSCCC
Trigger: GCAGCAGCAGCTGCAGAAGCAGCTCCTGTTCGCTGA...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGCCAGCATCTCCTGCTaGTGCTTGAGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVASISC*CLRCFC
Trigger: GCAGAAGCACCTCAAGCAGCAGCAGGAGATGCTGGC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGAGCATCTCCTGCTGCTaGTTGGCTGCCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKSISCC*LAASIS
Trigger: GGAGATGCTGGCAGCCAAGCAGCAGCAGGAGATGCT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGTTCAGAGGCTGTTTTaGGGAGGGGGAAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRVQRLF*GGGSRL
Trigger: GAGACGACTTCCCCCTCCGCAAAACAGCCTCTGAAC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGCATTCTCAGCGATGGTaGTGTGGGAGCTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELHSQRW*CGSCWE
Trigger: CTCCCAACAGCTCCCACAGCACCATCGCTGAGAATG...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGACAGTGACCGTGGCCTaGAGCCCTAGGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVTVTVA*SPREML
Trigger: CAACATCTCCCTAGGGCTGCAGGCCACGGTCACTGT...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCAGGGACTGGAGGGCCTaGCTCTCGGCCTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLRDWRA*LSASCC
Trigger: ACAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGATGCCGCGGGAGCTTaGCTACCGTCCGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLDAAGA*LPSACW
Trigger: CCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCCCAGCTGTAGCTGCTaGTGCTTCTGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKPSCSC*CFCFSR
Trigger: CCTGGAGAAGCAGAAGCAGCAGCAGCTACAGCTGGG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGCCCAGCTGTAGCTGCTaGTGCTTCTGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVPSCSC*CFCFSR
Trigger: CCTGGAGAAGCAGAAGCAGCAGCAGCTACAGCTGGG...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCCGCACATGCACTGGTaGTTTAGCATGAACGTGTCG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLPHMHW*FSMNVS
Trigger: CGACACGTTCATGCTAAAGCACCAGTGCATGTGCGG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGTTGCTGTCTAGCTTCTaGCGGTTGAGGGGACTGGTC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELLLSSF*RLRGLV
Trigger: GACCAGTCCCCTCAACCGGCAGAAGCTAGACAGCAA...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR GCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTTTTGCTGCAAGACTaGCTCATCCAAGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGLLLQD*LIQGLQ
Trigger: CTGCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAG...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGACTCCATGGGCTCCTCTaGCGGCCTGGGGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGLHGLL*RPGAVF
Trigger: GAACACAGCCCCAGGCCGGCAGAGGAGCCCATGGAG...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCAGCCTGGAGCCCCTCTaGAGGGACCACCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLSLEPL*RDHLLP
Trigger: GGGGAGAAGGTGGTCCCTGCAGAGGGGCTCCAGGCT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGCTTCTCCCCGCAGCATaGTGGATGGCTGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRLLPAA*WMAGKI
Trigger: GATTTTCCCAGCCATCCAGCATGCTGCGGGGAGAAG...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGACTATGAACCGATGGTaGTGGGACTCCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKTMNRW*WDSCPS
Trigger: GGAGGGGCAGGAGTCCCAGCACCATCGGTTCATAGT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGTGCTGTGGGAGGGAATaGTTGAGGCCGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKCCGRE*LRPPGV
Trigger: CACACCAGGCGGCCTCAACCATTCCCTCCCACAGCA...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGTCCAAAGAAGCATGGTaGGCTCCCCAGCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRSKEAW*APQHLG
Trigger: CCCCAAATGCTGGGGAGCCCACCATGCTTCTTTGGA...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTCAGCGATGGTGCTGTaGGAGCTGTTGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKSAMVL*ELLGEL
Trigger: CAGCTCTCCCAACAGCTCCCACAGCACCATCGCTGA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCTCTGTCTCCTCAGGGTaGGTGGTGGGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLSVSSG*VVGCLG
Trigger: GCCCAGGCAGCCCACCACCCACCCTGAGGAGACAGA...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCTTCCCGCACATGCACTaGTGCTTTAGCATGAACGTG +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLFPHMH*CFSMNV
Trigger: CACGTTCATGCTAAAGCACCAGTGCATGTGCGGGAA...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGAGAAGCAGAATCCCATaGCTGTGGATTCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGRSRIP*LWIPRR
Trigger: ACGCCGAGGAATCCACAGCCATGGGATTCTGCTTCT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGTTCTGTTACTCCTCCTaGCCCCTGAGAACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGFCYSS*PLRTQE
Trigger: TTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAA...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGCGACTCCTGGATCCCTaGGTTCTGGCCTTACCCCTT +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVRLLDP*VLALPL
Trigger: AAGGGGTAAGGCCAGAACCCAGGGATCCAGGAGTCG...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGGAGCCCAGAAGGTATaGAAGCTCCAGCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVGAQKV*KLQLRA
Trigger: GGCTCTCAGCTGGAGCTTCCATACCTTCTGGGCTCC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGTTCCTACAGGCTGGATaGCATCCCCTGGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELFLQAG*HPLEAL
Trigger: CAAGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAA...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCACACTATGAACCGATaGTGCTGGGACTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKHTMNR*CWDSCP
Trigger: GGGGCAGGAGTCCCAGCACCATCGGTTCATAGTGTG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGGAGGCAGTGAGGTGTaGGTTGGTGACAGTGACCGT +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKGGSEV*VGDSDR
Trigger: ACGGTCACTGTCACCAACTCACACCTCACTGCCTCC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGCACAGTGGCCAGGCTaGGGGGCGCCTGGTACACCT +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWAQWPG*GAPGTP
Trigger: AGGTGTACCAGGCGCCCCTCAGCCTGGCCACTGTGC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCAAAACATCTGGCGGTaGCAGAGTAGCCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKQNIWR*QSSHPE
Trigger: CTCTGGGTGGCTACTCTGTCACCGCCAGATGTTTTG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGACAAAATCACAATGGTaGAGCCCAGAGGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRTKSQW*SPEGWG
Trigger: CCCCCATCCCTCTGGGCTTCACCATTGTGATTTTGT...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGTCTGCAGAGATGGTaGGGACGAAAGAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRGLQRW*GRKKGK
Trigger: TTTCCCCTTCTTTCGTCCTCACCATCTCTGCAGACC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGCCCCAGGAGGGAGGTaGGCCTCTGCCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREAPGGR*ASAPSP
Trigger: GGGAGAAGGGGCAGAGGCTCACCTCCCTCCTGGGGC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGAGTGGGTTTACATaGGAACCAGACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELRSGFT*EPDQPQ
Trigger: CTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCT...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCCACTGTCACAGGGATaGTGTGCAGAGAAGTCCGCG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKPLSQG*CAEKSA
Trigger: CGCGGACTTCTCTGCACAGCATCCCTGTGACAGTGG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCAGCTCCTGCTGCAGTTaGTGCTCCCGCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSSSCCS*CSRSVG
Trigger: CCCCACACTGCGGGAGCAGCAACTGCAGCAGGAGCT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTGCAGCTGGACCTCATaGTGCCTTGTCAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKCSWTS*CLVRWS
Trigger: TGACCACCTGACAAGGCAGCATGAGGTCCAGCTGCA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGTGCTTGAGGTGCTTCTaGAGCTGGACCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVCLRCF*SWTSCC
Trigger: GCAGCATGAGGTCCAGCTGCAGAAGCACCTCAAGCA...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGATGCTCCAGCTCCTGCTaGCGCTTGGCTGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGCSSSC*RLAASI
Trigger: GATGCTGGCAGCCAAGCGGCAGCAGGAGCTGGAGCA...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTGCTGCTCCAGCTCCTaGTGCCGCTTGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPCCSSS*CRLAAS
Trigger: GCTGGCAGCCAAGCGGCAGCAGGAGCTGGAGCAGCA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGACAGTGACCGTGGCCTaGAGCCCTAGGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKTVTVA*SPREML
Trigger: CAACATCTCCCTAGGGCTGCAGGCCACGGTCACTGT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCTGCCTCTCGGCCTCCTaGTGTGTCGACAGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLCLSAS*CVDSFG
Trigger: CCCGAAGCTGTCGACACAGCAGGAGGCCGAGAGGCA...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTACTTGCCGGTCAGCGTaGCACCCTGCCGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPTCRSA*HPAAGT
Trigger: AGTCCCTGCGGCAGGGTGGCACGCTGACCGGCAAGT...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCCTCTGCTGCCGGGCCTaGTCCAGCAACAGCACATGC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSLCCRA*SSNSTC
Trigger: GCATGTGCTGTTGCTGGAGCAGGCCCGGCAGCAGAG...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGATTCTTGAGCTCTCCTaGAGCCACCTTGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELILELS*SHLEGQ
Trigger: CTGGCCTTCAAGGTGGCTGCAGGAGAGCTCAAGAAT...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCCCACGTTCAACTTCTaGTGTAGGAGTTTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLPTFNF*CRSFAV
Trigger: CACCGCAAAACTCCTACAGCAGAAGTTGAACGTGGG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGCCTGCTGGGTGCCATTaGCATGGTGAATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVPAGCH*HGECPS
Trigger: ACTGGGACATTCACCATGGCAATGGCACCCAGCAGG...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGCTTTTGCTGCAAGACTaGCTCATCCAAGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRLLLQD*LIQGLQ
Trigger: CTGCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAG...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCTCCATGGGCTCCTCTaGCGGCCTGGGGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPLHGLL*RPGAVF
Trigger: GAACACAGCCCCAGGCCGGCAGAGGAGCCCATGGAG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCGAATCGCAGGGTGGGTaGCCACCTCCCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSESQGG*PPPLHS
Trigger: AGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTC...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGCCCTCCTCACAGACTaGAGGCCACAGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGALLTD*RPQLGH
Trigger: GTGCCCAAGCTGTGGCCTGCAGTCTGTGAGGAGGGC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCAGGGAGGTGAGCCTCTaGCCCTTCTCCCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLREVSL*PFSPQH
Trigger: ATGCTGCGGGGAGAAGGGGCAGAGGCTCACCTCCCT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGATGGGACGGGAGGGGGTaGAGCTGCGGTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGWDGRG*SCGDVK
Trigger: CTTGACATCACCGCAGCTCCACCCCCTCCCGTCCCA...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGCAGGAAGCTGGCGTTaGGGGCTGGGACGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREAGSWR*GLGREG
Trigger: CCCCTCCCGTCCCAGCCCCCAACGCCAGCTTCCTGC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTCCAAAGAAGCATGGTaGGCTCCCCAGCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKSKEAW*APQHLG
Trigger: CCCCAAATGCTGGGGAGCCCACCATGCTTCTTTGGA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGAGCTGTTGGGAGAGCTaGGGCCGGAGCCGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRESCWES*GRSRVR
Trigger: GCGCACCCGGCTCCGGCCCCAGCTCTCCCAACAGCT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGTTCTCCAGGAACTGCTaGTGCTGTTGTTGCATGACC +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGFSRNC*CCCCMT
Trigger: GGTCATGCAACAACAGCACCAGCAGTTCCTGGAGAA...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGAAAGGCTGCAGCGGCTaGGCATCTGAGAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGKGCSG*ASENSF
Trigger: AAAACTGTTCTCAGATGCCCAGCCGCTGCAGCCTTT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCAGGCTGAGGGGCGCCTaGTACACCTGCAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLRLRGA*YTCKGC
Trigger: GCAGCCTTTGCAGGTGTACCAGGCGCCCCTCAGCCT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGTACGGCCCAGGGCCTaGTGGGGCACAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREVRPRA*WGTVAR
Trigger: CCTGGCCACTGTGCCCCACCAGGCCCTGGGCCGTAC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGTGGATTCCTCGGCGTaGTGTCCTGGGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPVDSSA*CPGGRM
Trigger: CATCCGGCCCCCAGGACACCACGCCGAGGAATCCAC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGGGTCATCAGCTGCCTaGTCAAGTGGCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELGSSAA*SSGQNI
Trigger: GATGTTTTGGCCACTTGACCAGGCAGCTGATGACCC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGGTGGGGAGCAGACCTaGTTCTGTTACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKGGEQT*FCYSSW
Trigger: CCAGGAGGAGTAACAGAACCAGGTCTGCTCCCCACC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTTCCTACAGGCTGGATaGCATCCCCTGGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKFLQAG*HPLEAL
Trigger: CAAGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGTGGTGTGGGCTCCTTTaGCTTCGACAAGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRWCGLL*LRQEEF
Trigger: GAATTCCTCTTGTCGAAGTCAAAGGAGCCCACACCA...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGACTCTGCGGCAGCGGTaGGGACTGAGTGCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWTLRQR*GLSAAQ
Trigger: CTGAGCCGCACTCAGTCCTCACCGCTGCCGCAGAGT...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGGTGCTGTTGTTGCATaGCCAGCTGCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLGAVVA*PAAAGP
Trigger: AGGCCCTGCAGCAGCTGGTCATGCAACAACAGCACC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTGCTCTGGATCTCGATaGCTTTCTCTAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKCSGSR*LSLAWP
Trigger: TGGCCACGCTAGAGAAAGTCATCGAGATCCAGAGCA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGCACACAAGCACACTATaGACCGATGGTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVHTSTL*TDGAGT
Trigger: AGTCCCAGCACCATCGGTTCATAGTGTGCTTGTGTG...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGTCACAGGGATGCTGTaGAGAGAAGTCCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGVTGML*REVRGR
Trigger: CCTGCCGCGGACTTCTCTGCACAGCATCCCTGTGAC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGATGCTTCTGCAGCTGCTaGTGCTGCTTGAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGCFCSC*CCLSAR
Trigger: CCTGGCGCTCAAGCAGCAGCAGCAGCTGCAGAAGCA...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCAGCTGCTTCTGCAGCTaGTGCTGCTGCTTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLSCFCS*CCCLSA
Trigger: GGCGCTCAAGCAGCAGCAGCAGCTGCAGAAGCAGCT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGAGCTCTTCCTGCCGCTaGTGCTCCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRESSSCR*CSRCRC
Trigger: GCAGCGGCAGCGGGAGCAGCAGCGGCAGGAAGAGCT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCGCAGGATGAGCAGCTaGTGCTCCAGCCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPRRMSS*CSSRCF
Trigger: GAAGCAGCGGCTGGAGCAGCAGCTGCTCATCCTGCG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGTCAGCTTTACCTCAGTaGTGGCAATGGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLSALPQ*WQWHSL
Trigger: AAGAGAGTGCCATTGCCAGCACTGAGGTAAAGCTGA...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCTGCCTACCGTCCGCATaGTGGTGGCCACACGTTCAC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSCLPSA*WWPHVH
Trigger: GTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCA...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGATGCCGCGGGAGCTTaGCTACCGTCCGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWDAAGA*LPSACW
Trigger: CCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGAGCTGTAGCTGCTGCTaGTTCTGCTTCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVSCSCC*FCFSRN
Trigger: GTTCCTGGAGAAGCAGAAGCAGCAGCAGCTACAGCT...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGCACACCTCCTGTCCATaGCACGTTCACATTGTACCC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVHTSCP*HVHIVP
Trigger: GGGTACAATGTGAACGTGGCATGGACAGGAGGTGTG...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGCCAGGGTCATCAGCTaGCTGGTCAAGTGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKARVIS*LVKWPK
Trigger: TTTTGGCCACTTGACCAGGCAGCTGATGACCCTGGC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCACCACCCGGCCCCCTaGCAGGGTCATCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREHHPAP*QGHQLP
Trigger: AGGCAGCTGATGACCCTGGCAGGGGGCCGGGTGGTG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGACACCACCACCCCCTaGAGAGGGAGCAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGDTTTP*RGSRLL
Trigger: TAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCACTGGGCATGGCTCTTaGCAGCACCGGCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSTGHGS*QHRLHL
Trigger: GAGGTGAAGCCGGTGCTGCCAAGAGCCATGCCCAGT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGTGGTCCAAAGAAGCATaGTGGGCTCCCCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKWSKEA*WAPQHL
Trigger: CAAATGCTGGGGAGCCCACCATGCTTCTTTGGACCA...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCCGTCCGCATGCTGGTaGCCACACGTTCACCCGTCA +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPPSACW*PHVHPS
Trigger: TGACGGGTGAACGTGTGGCCACCAGCATGCGGACGG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTGCTCTCACTCTCTGTaGAGCCCTCCCGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPCSHSL*SPPGAW
Trigger: CCATGCCCCGGGAGGGCTCCACAGAGAGTGAGAGCA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTCCAGTGTTTGCTCTaGATCTCGATGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLLQCLL*ISMTFS
Trigger: AGAGAAAGTCATCGAGATCCAGAGCAAACACTGGAG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCCCTGGCAGGGCTCCTaGGAAAGAGAAGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPPWQGS*EREGTA
Trigger: CGCTGTCCCTTCTCTTTCCCAGGAGCCCTGCCAGGG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGGGGTGGAGCTGCGGTaGTGTCAAGAGAGACAGACG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPGVELR*CQERQT
Trigger: CGTCTGTCTCTCTTGACATCACCGCAGCTCCACCCC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGGATGGTTCCCGACCTaGCATCCCATCTGCCGACTC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPGWFPT*HPICRL
Trigger: GAGTCGGCAGATGGGATGTCAGGTCGGGAACCATCC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR TCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCATACATCTTCTGGCTaGTGGGGCCGAGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKHTSSG*WGRATS
Trigger: AGAAGTTGCTCGGCCCCATCAGCCAGAAGATGTATG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR TCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCAGGAGGGGCAAGGCTaGGAGACCCACACGGCACAC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREQEGQG*ETHTAH
Trigger: GTGTGCCGTGTGGGTCTCTCAGCCTTGCCCCTCCTG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCACACAAGCACACTATaGACCGATGGTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKHTSTL*TDGAGT
Trigger: AGTCCCAGCACCATCGGTTCATAGTGTGCTTGTGTG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGTCCTGCTGCAGTTGCTaGTCCCGCAGTGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWSCCSC*SRSVGS
Trigger: GGACCCCACACTGCGGGAGCAGCAACTGCAGCAGGA...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTTCTGCAGCTGCTGCTaGTGCTTGAGCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPFCSCC*CLSARS
Trigger: GCTCCTGGCGCTCAAGCAGCAGCAGCAGCTGCAGAA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCGCTGCCAGCATCTCCTaGTGCTGCTTGAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSAASIS*CCLRCF
Trigger: GAAGCACCTCAAGCAGCAGCAGGAGATGCTGGCAGC...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGACCCCAGCATTTGGGGTaGTGTGGGAGGGAATGGTTG +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGPQHLG*CGREWL
Trigger: CAACCATTCCCTCCCACAGCACCCCAAATGCTGGGG...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGATCCAGCAACAGCACATaGTGCAGCAGGGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGSSNST*CSREAC
Trigger: GCATGCCTCCCTGCTGCAGCATGTGCTGTTGCTGGA...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGTCACTAGTGGGGACTaGCCGTGGAGTGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPVTSGD*PWSGTA
Trigger: TGCTGTGCCACTCCACGGGCAGTCCCCACTAGTGAC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTGCCTACCGTCCGCATaGTGGTGGCCACACGTTCAC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPCLPSA*WWPHVH
Trigger: GTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGTGCATGACCAGCTGCTaGAGGGCCTGGGGACTCTGC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWCMTSC*RAWGLC
Trigger: GCAGAGTCCCCAGGCCCTGCAGCAGCTGGTCATGCA...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGAGCTGTAGCTGCTGCTaGTTCTGCTTCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKSCSCC*FCFSRN
Trigger: GTTCCTGGAGAAGCAGAAGCAGCAGCAGCTACAGCT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCCCAGCAAGACCTCCTaGTGCTCCGTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWPSKTS*CSVSSS
Trigger: GGAGGAGCTGACGGAGCAGCAGGAGGTCTTGCTGGG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGTGTGGTATTCAGAGTaGACTGTCTGGATCTCATCT +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLVWYSE*TVWISS
Trigger: AGATGAGATCCAGACAGTGCACTCTGAATACCACAC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR GCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGATTCTTGAGCTCTCCTaGAGCCACCTTGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKILELS*SHLEGQ
Trigger: CTGGCCTTCAAGGTGGCTGCAGGAGAGCTCAAGAAT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTACCACCTTCTCCCCTTaGCCAGGCTGTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPTTFSP*PGCASR
Trigger: TCTGCTGGCACAGCCTGGGCAAGGGGAGAAGGTGGT...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGGGCTCCCCAGCATTTaGGGTGCTGTGGGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPGLPSI*GAVGGN
Trigger: ATTCCCTCCCACAGCACCCCAAATGCTGGGGAGCCC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCTCAGCGATGGTGCTGTaGGAGCTGTTGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLSAMVL*ELLGEL
Trigger: CAGCTCTCCCAACAGCTCCCACAGCACCATCGCTGA...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGAAAGGCTGCAGCGGCTaGGCATCTGAGAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVKGCSG*ASENSF
Trigger: AAAACTGTTCTCAGATGCCCAGCCGCTGCAGCCTTT...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCTCGGCGTGGTGTCCTaGGGGCCGGATGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWLGVVS*GPDDGK
Trigger: TTTGCCATCATCCGGCCCCCAGGACACCACGCCGAG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCTCCAGTGTTTGCTCTaGATCTCGATGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLLQCLL*ISMTFS
Trigger: AGAGAAAGTCATCGAGATCCAGAGCAAACACTGGAG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCCGACAGCAAGGCCATaGCGCTCACAGTCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWPTARP*RSQSRP
Trigger: AGGCCGAGACTGTGAGCGCCATGGCCTTGCTGTCGG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCAGAATGCAGGAAAATaGGGGGAGGGACACATGGGA +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKQNAGK*GEGHMG
Trigger: TCCCATGTGTCCCTCCCCCCATTTTCCTGCATTCTG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCTGGAGAGTACTGTCTaGGCCCCCGTGCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWLESTV*APVPTL
Trigger: CAAGGTGGGCACGGGGGCCCAGACAGTACTCTCCAG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGGTGGGGAGCAGACCTaGTTCTGTTACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGGGEQT*FCYSSW
Trigger: CCAGGAGGAGTAACAGAACCAGGTCTGCTCCCCACC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTATGAACCGATGGTGCTaGGACTCCTGCCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPMNRWC*DSCPSP
Trigger: AGGGGAGGGGCAGGAGTCCCAGCACCATCGGTTCAT...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCCACACTATGAACCGATaGTGCTGGGACTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSHTMNR*CWDSCP
Trigger: GGGGCAGGAGTCCCAGCACCATCGGTTCATAGTGTG...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGACAGCATACATCTTCTaGCTGATGGGGCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKTAYIF*LMGPVV
Trigger: CACCACAGGCCCCATCAGCCAGAAGATGTATGCTGT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336057.9
CDS-3UTR TCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCAGGCCCGGCACCTGTaGTCTCAACAGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPQARHL*SQQLSS
Trigger: AGAAGAGAGCTGTTGAGATCACAGGTGCCGGGCCTG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGGGGATGTTGGGGACTaGGCCAGTAAAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGGDVGD*ASKAIL
Trigger: GAGAATGGCTTTACTGGCTCAGTCCCCAACATCCCC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGACTGGTGCTTTAGCATaGACGTGTCGTAGACCACAC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKTGALA*TCRRPH
Trigger: GTGTGGTCTACGACACGTTCATGCTAAAGCACCAGT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR TCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGTGCCATTGCCATGGTaGATGTCCCAGTCCACGATG +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLVPLPW*MSQSTM
Trigger: CATCGTGGACTGGGACATTCACCATGGCAATGGCAC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGCTGCAGCTCTACACTaGGCAGAGCCGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPAAALH*AEPRHK
Trigger: CTTGTGTCTCGGCTCTGCTCAGTGTAGAGCTGCAGC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGGATGGTTCCCGACCTaGCATCCCATCCGACTCGTT +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPGWFPT*HPIRLV
Trigger: AACGAGTCGGATGGGATGTCAGGTCGGGAACCATCC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGAGCTCCTGCTGCAGTTaGTGCTCCCGCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRESSCCS*CSRSVG
Trigger: CCCCACACTGCGGGAGCAGCAACTGCAGCAGGAGCT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGCTCCAGCTCCTGCTaGCGCTTGGCTGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRECSSSC*RLAASI
Trigger: GATGCTGGCAGCCAAGCGGCAGCAGGAGCTGGAGCA...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGTTCAGAGGCTGTTTTaGGGAGGGGGAAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLVQRLF*GGGSRL
Trigger: GAGACGACTTCCCCCTCCGCAAAACAGCCTCTGAAC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCCATTCTCAGCGATGGTaGTGTGGGAGCTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSHSQRW*CGSCWE
Trigger: CTCCCAACAGCTCCCACAGCACCATCGCTGAGAATG...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTCCAGCAACAGCACATaGTGCAGCAGGGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPSSNST*CSREAC
Trigger: GCATGCCTCCCTGCTGCAGCATGTGCTGTTGCTGGA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCTGCTGGTGCTGTTGTTaGATGACCAGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSCWCCC*MTSCCR
Trigger: CCTGCAGCAGCTGGTCATGCAACAACAGCACCAGCA...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGATGCTGGTGCTGTTGTTaGATGACCAGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGCWCCC*MTSCCR
Trigger: CCTGCAGCAGCTGGTCATGCAACAACAGCACCAGCA...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTACACCTGCAAAGGCTaGAGCGGCTGGGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPYTCKG*SGWASE
Trigger: CTCAGATGCCCAGCCGCTGCAGCCTTTGCAGGTGTA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGGCCGAGCAACTTCTTaGTGTCTAGCTTCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGGRATS*CLASAG
Trigger: ACCGGCAGAAGCTAGACAGCAAGAAGTTGCTCGGCC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGGCAGCCCACTGCCATaGGCACAGCACTGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREGSPLP*AQHWRS
Trigger: ACTCCTCCAGTGCTGTGCGCATGGCAGTGGGCTGCC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCCCTGCTGGGTGCCATTaGCATGGTGAATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLPAGCH*HGECPS
Trigger: ACTGGGACATTCACCATGGCAATGGCACCCAGCAGG...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCCCAGCGGCGAACTTCTaGACACAGCTCCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLPAANF*TQLQCL
Trigger: CAAACACTGGAGCTGTGTGCAGAAGTTCGCCGCTGG...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCTCCTCGGTCTCACCTaGTTGGGCCTCTCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRELLGLT*LGLSQG
Trigger: TCCCTGCGAGAGGCCCAAGCAGGTGAGACCGAGGAG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGACACCACCACCCCCTaGAGAGGGAGCAGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWDTTTP*RGSRLL
Trigger: TAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGACCTCCCCTCCACTCTaGATCTTAAAGACAGTAGTG +
Preference number: 4 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKTSPPL*ILKTVV
Trigger: CACTACTGTCTTTAAGATGCAGAGTGGAGGGGAGGT...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCCTTCTCCCCGCAGCATaGTGGATGGCTGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSLLPAA*WMAGKI
Trigger: GATTTTCCCAGCCATCCAGCATGCTGCGGGGAGAAG...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGAGTTCATGCCGGCTCTaGGCCTGCAGGAAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRESSCRL*ACRKLA
Trigger: CGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGACTGGGCATGGCTCTTaGCAGCACCGGCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWTGHGS*QHRLHL
Trigger: GAGGTGAAGCCGGTGCTGCCAAGAGCCATGCCCAGT...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCAGGTGCTTCTGCAGCTaGACCTCATGCTGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSRCFCS*TSCCLV
Trigger: GACAAGGCAGCATGAGGTCCAGCTGCAGAAGCACCT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGCTTTACCTCAGTGCTaGCAATGGCACTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKALPQC*QWHSLC
Trigger: GCAAAGAGAGTGCCATTGCCAGCACTGAGGTAAAGC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGAACGCACTTTCAAGTTaGGTTCAGAGGCTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRNALSS*VQRLFC
Trigger: GCAAAACAGCCTCTGAACCCAACTTGAAAGTGCGTT...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCAGCCATTCTCAGCGATaGTGCTGTGGGAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSSHSQR*CCGSCW
Trigger: CCAACAGCTCCCACAGCACCATCGCTGAGAATGGCT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCTACCGTCCGCATGCTaGTGGCCACACGTTCACCCG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRELPSAC*WPHVHP
Trigger: CGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCATTGTACCCCACGCCTaGTCCTCCACCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLIVPHA*SSTNLF
Trigger: GAAGAGGTTGGTGGAGGACCAGGCGTGGGGTACAAT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGATGGCGGTCAAGTCATaGCCTCCCTCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREMAVKS*PPSRAS
Trigger: GCTGGCCCTGGAGGGAGGCCATGACTTGACCGCCAT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGTCTCCTGCTGCTGCTTaGGGTGCTTCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWSPAAA*GASAAG
Trigger: TCCAGCTGCAGAAGCACCTCAAGCAGCAGCAGGAGA...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGGGGATGTTGGGGACTaGGCCAGTAAAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPGDVGD*ASKAIL
Trigger: GAGAATGGCTTTACTGGCTCAGTCCCCAACATCCCC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCAAAACATCTGGCGGTaGCAGAGTAGCCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPQNIWR*QSSHPE
Trigger: CTCTGGGTGGCTACTCTGTCACCGCCAGATGTTTTG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCTGCTCTGGATCTCGATaGCTTTCTCTAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSCSGSR*LSLAWP
Trigger: TGGCCACGCTAGAGAAAGTCATCGAGATCCAGAGCA...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTAGCTGGACCTCATGCTaGCTTGTCAGGTGGTCATGC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPSWTSC*LVRWSC
Trigger: GCATGACCACCTGACAAGGCAGCATGAGGTCCAGCT...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCCTGTGGTGAAGAGGTaGTTGACGGGCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREPVVKR*LTGWSG
Trigger: CCCAGACCAGCCCGTCAAGCACCTCTTCACCACAGG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCCACACCTCCTGTCCATaGCACGTTCACATTGTACCC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLHTSCP*HVHIVP
Trigger: GGGTACAATGTGAACGTGGCATGGACAGGAGGTGTG...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGACCACCTTCTCCCCTTaGCCAGGCTGTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRETTFSP*PGCASR
Trigger: TCTGCTGGCACAGCCTGGGCAAGGGGAGAAGGTGGT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGCATTTGGGGTGCTGTaGGAGGGAATGGTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWAFGVL*EGMVEA
Trigger: GGCCTCAACCATTCCCTCCCACAGCACCCCAAATGC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCTGGTCCAAAGAAGCATaGTGGGCTCCCCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLWSKEA*WAPQHL
Trigger: CAAATGCTGGGGAGCCCACCATGCTTCTTTGGACCA...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGAACGCACTTTCAAGTTaGGTTCAGAGGCTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LGRHHHPLQREQASRAEVNALSS*VQRLFC
Trigger: GCAAAACAGCCTCTGAACCCAACTTGAAAGTGCGTT...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTAGCCATTCTCAGCGATaGTGCTGTGGGAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPSHSQR*CCGSCW
Trigger: CCAACAGCTCCCACAGCACCATCGCTGAGAATGGCT...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCAGAAGCAGAATCCCATaGCTGTGGATTCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSRSRIP*LWIPRR
Trigger: ACGCCGAGGAATCCACAGCCATGGGATTCTGCTTCT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTAGCTGCCTGGTCAAGTaGCCAAAACATCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPSCLVK*PKHLAV
Trigger: CACCGCCAGATGTTTTGGCCACTTGACCAGGCAGCT...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGACAAAGCAAGGAGTaGGTTTACATGAGAACCAGA +
Preference number: 4 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELRQSKE*VYMRTR
Trigger: TCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCTGGTGTGGGCTCCTTTaGCTTCGACAAGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSWCGLL*LRQEEF
Trigger: GAATTCCTCTTGTCGAAGTCAAAGGAGCCCACACCA...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGCGTGGCCACTGCGTTaGTGTTGGGCTTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREAWPLR*CWAFAA
Trigger: TGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCCTTGTCAGGTGGTCATaGTGTTTCTGGAACTCAGCG +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLLVRWS*CFWNSA
Trigger: CGCTGAGTTCCAGAAACAGCATGACCACCTGACAAG...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCTGGTCATGCTGTTTCTaGAACTCAGCGAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLWSCCF*NSANRS
Trigger: GCTCCTGTTCGCTGAGTTCCAGAAACAGCATGACCA...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCTGGTCATGCTGTTTCTaGAACTCAGCGAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSWSCCF*NSANRS
Trigger: GCTCCTGTTCGCTGAGTTCCAGAAACAGCATGACCA...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTCAGGTGAGAACTCGTaGGCAATGGGCATCACCACT +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPSGENS*AMGITT
Trigger: AGTGGTGATGCCCATTGCCCACGAGTTCTCACCTGA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGAGCTGCCTGGTCAAGTaGCCAAAACATCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWSCLVK*PKHLAV
Trigger: CACCGCCAGATGTTTTGGCCACTTGACCAGGCAGCT...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCAGAGGCATCACAGATaGCGGTCAAGTCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWQRHHR*RSSHGL
Trigger: GAGGCCATGACTTGACCGCCATCTGTGATGCCTCTG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCAGCATGCTGGATGGCTaGGAAAATCTGGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSSMLDG*ENLVLT
Trigger: TGTCAGGACCAGATTTTCCCAGCCATCCAGCATGCT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGTGGTTTCCTACAGGCTaGATGGCATCCCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWWFPTG*MASPGS
Trigger: GCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCA...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGCCACTTCCCATCTTTaGTTTCCTACAGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLATSHL*FPTGWM
Trigger: CATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGTGGCAAATCCATTCTTaGGCTCTCCTGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWWQIHS*ALLQPP
Trigger: AGGTGGCTGCAGGAGAGCTCAAGAATGGATTTGCCA...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGCTTGAGGTGCTTCTaGAGCTGGACCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRECLRCF*SWTSCC
Trigger: GCAGCATGAGGTCCAGCTGCAGAAGCACCTCAAGCA...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGAGCTGCTGCTGCTTCTaGTTCTCCAGGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRESCCCF*FSRNCW
Trigger: CCAGCAGTTCCTGGAGAAGCAGAAGCAGCAGCAGCT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTTGCCCAGCTGTAGCTaGTGCTGCTTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRELPSCS*CCFCFS
Trigger: GGAGAAGCAGAAGCAGCAGCAGCTACAGCTGGGCAA...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGATTGATGTTGGGCTTTTaGTGCAAGACTGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGLMLGF*CKTASS
Trigger: GGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAA...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTTCTCCAGGAACTGCTaGTGCTGTTGTTGCATGACC +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPFSRNC*CCCCMT
Trigger: GGTCATGCAACAACAGCACCAGCAGTTCCTGGAGAA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTTCAGAGTGCACTGTCTaGATCTCATCTAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPSECTV*ISSSVA
Trigger: AGCCACGCTAGATGAGATCCAGACAGTGCACTCTGA...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCCATGCGCACAGCACTaGAGGAGTGCATCTCATTCC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREPCAQH*RSASHS
Trigger: GGAATGAGATGCACTCCTCCAGTGCTGTGCGCATGG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGTCAGGTGAGAACTCGTaGGCAATGGGCATCACCACT +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWSGENS*AMGITT
Trigger: AGTGGTGATGCCCATTGCCCACGAGTTCTCACCTGA...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR TCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCAAATCCATTCTTaGGCTCTCCTGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREWQIHS*ALLQPP
Trigger: AGGTGGCTGCAGGAGAGCTCAAGAATGGATTTGCCA...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGACAGCACTGGAGGAGTaGATCTCATTCCACACGGTG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRETALEE*ISFHTV
Trigger: CACCGTGTGGAATGAGATGCACTCCTCCAGTGCTGT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGGGTCATCAGCTGCCTaGTCAAGTGGCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREGSSAA*SSGQNI
Trigger: GATGTTTTGGCCACTTGACCAGGCAGCTGATGACCC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGAGCATGCTGGATGGCTaGGAAAATCTGGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWSMLDG*ENLVLT
Trigger: TGTCAGGACCAGATTTTCCCAGCCATCCAGCATGCT...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCTTGTCAGGTGGTCATaGTGTTTCTGGAACTCAGCG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRELVRWS*CFWNSA
Trigger: CGCTGAGTTCCAGAAACAGCATGACCACCTGACAAG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCCCACGTTCAACTTCTaGTGTAGGAGTTTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREPTFNF*CRSFAV
Trigger: CACCGCAAAACTCCTACAGCAGAAGTTGAACGTGGG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGAGAGAAAGTATATGTaGTACTGGGGAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWERKYM*YWGGGG
Trigger: TCCTCCTCCTCCCCAGTACCACATATACTTTCTCTC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTCAGCTTTACCTCAGTaGTGGCAATGGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRESALPQ*WQWHSL
Trigger: AAGAGAGTGCCATTGCCAGCACTGAGGTAAAGCTGA...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR GCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTTGATGTTGGGCTTTTaGTGCAAGACTGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGRELMLGF*CKTASS
Trigger: GGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAA...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGAGAGAAAGTATATGTaGTACTGGGGAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQSKEWVYMRTRPATGREERKYM*YWGGGG
Trigger: TCCTCCTCCTCCCCAGTACCACATATACTTTCTCTC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CCA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGAGACAAAGCAAGGAGTaGGTTTACATGAGAACCAGA +
Preference number: 4 (lower is better)
Translates to: QSKEWVYMRTRPATGREWRQSKE*VYMRTR
Trigger: TCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS CCA 90 bp GGCTCCTCTGCCGGCCTGGGGCTGTGTTCCCGGGCTGCCGCAGCCTaGGCCTGCTCGGCCCCCACCGACAGCAAGGCCATGGCGCTCACA +
Preference number: 5 (lower is better)
Translates to: GSSAGLGLCSRAAAA*ACSAPTDSKAMALT
Trigger: TGTGAGCGCCATGGCCTTGCTGTCGGTGGGGGCCGAGCAGGCCCAGGCTGCGGCAGCCCGGGAACACAGCCCCAGGCCGGCAGAGGAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS CCA 90 bp CCAGGGAGGGGGCCGCCAGAGGCGGGGAGCAGACCGAAGGGAAGGTaGTCGGGCAGCCCGCACAGCACAGGTTCCCTCAGGCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: PGRGPPEAGSRPKGR*SGSPHSTGSLRPLP
Trigger: CGGCAGTGGCCTGAGGGAACCTGTGCTGTGCGGGCTGCCCGACCACCTTCCCTTCGGTCTGCTCCCCGCCTCTGGCGGCCCCCTCCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591714.5
CDS CCA 90 bp CTGCCGCAGCCTGGGCCTGCTCGGCCCCCACCGACAGCAAGGCCATaGCGCTCACAGTCTCGGCCTCCTCGGTCTCACCTGCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LPQPGPARPPPTARP*RSQSRPPRSHLLGP
Trigger: AGGCCCAAGCAGGTGAGACCGAGGAGGCCGAGACTGTGAGCGCCATGGCCTTGCTGTCGGTGGGGGCCGAGCAGGCCCAGGCTGCGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS TCA 90 bp AGGACTGGGTACGGCCCAGGGCCTGGTGGGGCACAGTGGCCAGGCTaGGGGGCGCCTGGTACACCTGCAAAGGCTGCAGCGGCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: RTGYGPGPGGAQWPG*GAPGTPAKAAAAGH
Trigger: ATGCCCAGCCGCTGCAGCCTTTGCAGGTGTACCAGGCGCCCCTCAGCCTGGCCACTGTGCCCCACCAGGCCCTGGGCCGTACCCAGTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588419.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 90 bp TCTTCCTGCCGCTGCTGCTCCCGCTGCCGCTGCTGCTCCAGCTCCTaGTGCCGCTTGGCTGCCAGCATCTCCTGCTGCTGCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSCRCCSRCRCCSSS*CRLAASISCCCLAA
Trigger: GGCAGCCAAGCAGCAGCAGGAGATGCTGGCAGCCAAGCGGCAGCAGGAGCTGGAGCAGCAGCGGCAGCGGGAGCAGCAGCGGCAGGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000682912.1
CDS GCA 90 bp CGCTGCTTCTCCAGCTCTTCCTGCCGCTGCTGCTCCCGCTGCCGCTaGTGCTCCAGCTCCTGCTGCCGCTTGGCTGCCAGCATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RCFSSSSCRCCSRCR*CSSSCCRLAASISC
Trigger: GCAGGAGATGCTGGCAGCCAAGCGGCAGCAGGAGCTGGAGCAGCAGCGGCAGCGGGAGCAGCAGCGGCAGGAAGAGCTGGAGAAGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000682912.1
CDS GCA 90 bp GATGGTGCTGTGGGAGCTGTTGGGAGAGCTGGGGCCGGAGCCGGGTaGGCTGTTACACACGGACGACGCCCCAGGCCCGGCACCTGTGAT +
Preference number: 5 (lower is better)
Translates to: DGAVGAVGRAGAGAG*AVTHGRRPRPGTCD
Trigger: ATCACAGGTGCCGGGCCTGGGGCGTCGTCCGTGTGTAACAGCGCACCCGGCTCCGGCCCCAGCTCTCCCAACAGCTCCCACAGCACCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS GCA 90 bp AACTTGCCGGTCAGCGTGCCACCCTGCCGCAGGGACTGGAGGGCCTaGCTCTCGGCCTCCTGCTGTGTCGACAGCTTCGGGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: NLPVSVPPCRRDWRA*LSASCCVDSFGEAV
Trigger: CACTGCCTCCCCGAAGCTGTCGACACAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGGTGGCACGCTGACCGGCAAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 90 bp TGCGGCTCAGGGGCCGATGCCGCGGGAGCTTGCCTACCGTCCGCATaGTGGTGGCCACACGTTCACCCGTCACTAGTGGGGACTGCCCGT +
Preference number: 5 (lower is better)
Translates to: CGSGADAAGACLPSA*WWPHVHPSLVGTAR
Trigger: ACGGGCAGTCCCCACTAGTGACGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCGGCCCCTGAGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS CCA 90 bp GGCTCAGGGGCCGATGCCGCGGGAGCTTGCCTACCGTCCGCATGCTaGTGGCCACACGTTCACCCGTCACTAGTGGGGACTGCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: GSGADAAGACLPSAC*WPHVHPSLVGTARG
Trigger: TCCACGGGCAGTCCCCACTAGTGACGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCGGCCCCTGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS-3UTR CAA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCACGGCTCCTCCATCTTaGCGGCGGCTCCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLTAPPS*RRLLRL
Trigger: GAGCCGGAGGAGCCGCCGCAAAGATGGAGGAGCCGT...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS GCA 90 bp TCCCATCTGCCGACTCGTTGGGAGAGTTCATGCCGGCTCTGGGCCTaGAGGAAGCTGGCGTTGGGGGCTGGGACGGGAGGGGGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: SHLPTRWESSCRLWA*RKLALGAGTGGGGA
Trigger: AGCTCCACCCCCTCCCGTCCCAGCCCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACGAGTCGGCAGATGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS GCA 90 bp CTGCTCCCGCTGCCGCTGCTGCTCCAGCTCCTGCTGCCGCTTGGCTaGCAGCATCTCCTGCTGCTGCTTGGCTGCCAGCATCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLPLPLLLQLLLPLG*QHLLLLLGCQHLLL
Trigger: CAGCAGGAGATGCTGGCAGCCAAGCAGCAGCAGGAGATGCTGGCAGCCAAGCGGCAGCAGGAGCTGGAGCAGCAGCGGCAGCGGGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000682912.1
CDS GCA 90 bp GTGCCACCCTGCCGCAGGGACTGGAGGGCCTGCCTCTCGGCCTCCTaGTGTGTCGACAGCTTCGGGGAGGCAGTGAGGTGTGAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: VPPCRRDWRACLSAS*CVDSFGEAVRCELV
Trigger: CACCAACTCACACCTCACTGCCTCCCCGAAGCTGTCGACACAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGGTGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 90 bp GCGGTGAGGACTGAGTGCGGCTCAGGGGCCGATGCCGCGGGAGCTTaGCTACCGTCCGCATGCTGGTGGCCACACGTTCACCCGTCACTA +
Preference number: 5 (lower is better)
Translates to: AVRTECGSGADAAGA*LPSACWWPHVHPSL
Trigger: TAGTGACGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCGGCCCCTGAGCCGCACTCAGTCCTCACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 90 bp GAAGGTGGTCGGGCAGCCCGCACAGCACAGGTTCCCTCAGGCCACTaGCGACGGGACCCACACTGTAGGGAAGTGCCTCATCCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EGGRAARTAQVPSGH*RRDPHCREVPHPAW
Trigger: CCAGGCCGGATGAGGCACTTCCCTACAGTGTGGGTCCCGTCGGCAGTGGCCTGAGGGAACCTGTGCTGTGCGGGCTGCCCGACCACCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591714.5
CDS CCA 90 bp GTGCTCATGAACTTGCCGGTCAGCGTGCCACCCTGCCGCAGGGACTaGAGGGCCTGCCTCTCGGCCTCCTGCTGTGTCGACAGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: VLMNLPVSVPPCRRD*RACLSASCCVDSFG
Trigger: CCCGAAGCTGTCGACACAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGGTGGCACGCTGACCGGCAAGTTCATGAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS CCA 90 bp TCAGGGGCCGATGCCGCGGGAGCTTGCCTACCGTCCGCATGCTGGTaGCCACACGTTCACCCGTCACTAGTGGGGACTGCCCGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: SGADAAGACLPSACW*PHVHPSLVGTARGV
Trigger: CACTCCACGGGCAGTCCCCACTAGTGACGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCGGCCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS-3UTR CAA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGGTCTCACCTGCTaGGGCCTCTCGCAGGGACCG +
Preference number: 5 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGLGLTC*GLSQGP
Trigger: CGGTCCCTGCGAGAGGCCCAAGCAGGTGAGACCGAG...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCCCCCGTGCCCACCTaGAGCTGGCCCAGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRAPVPT*SWPRLQ
Trigger: TTGGAGCCTGGGCCAGCTCAAGGTGGGCACGGGGGC...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS GCA 90 bp TGCCCGTGGAGTGGCACAGCAATGAGGGTGCTCTGCTGCCGGGCCTaGTCCAGCAACAGCACATGCTGCAGCAGGGAGGCATGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: CPWSGTAMRVLCCRA*SSNSTCCSREACPW
Trigger: CCACGGGCATGCCTCCCTGCTGCAGCATGTGCTGTTGCTGGAGCAGGCCCGGCAGCAGAGCACCCTCATTGCTGTGCCACTCCACGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 90 bp ACATCCCATCCGACTCGTTGGGAGAGTTCATGCCGGCTCTGGGCCTaGAGGAAGCTGGCGTTGGGGGCTGGGACGGGAGGGGGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: TSHPTRWESSCRLWA*RKLALGAGTGGGGA
Trigger: AGCTCCACCCCCTCCCGTCCCAGCCCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACGAGTCGGATGGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS CCA 90 bp CTGACATCCCATCTGCCGACTCGTTGGGAGAGTTCATGCCGGCTCTaGGCCTGCAGGAAGCTGGCGTTGGGGGCTGGGACGGGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: LTSHLPTRWESSCRL*ACRKLALGAGTGGG
Trigger: ACCCCCTCCCGTCCCAGCCCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACGAGTCGGCAGATGGGATGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS CCA 90 bp GACCTGACATCCCATCCGACTCGTTGGGAGAGTTCATGCCGGCTCTaGGCCTGCAGGAAGCTGGCGTTGGGGGCTGGGACGGGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: DLTSHPTRWESSCRL*ACRKLALGAGTGGG
Trigger: ACCCCCTCCCGTCCCAGCCCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACGAGTCGGATGGGATGTCAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS-3UTR CAA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGTGTGGGAGGGAATGGTaGAGGCCGCCTGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGCGREW*RPPGVG
Trigger: GCCCACACCAGGCGGCCTCAACCATTCCCTCCCACA...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGCGATGCCGCGGGAGCTaGCCTACCGTCCGCATGCTG +
Preference number: 5 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELRCRGS*PTVRML
Trigger: CAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCG...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS TCA 90 bp GTGCAGAGAAGTCCGCGGCAGGATTTCCAAGGATGGTTCCCGACCTaGCATCCCATCTGCCGCTGCGGCTCGAGCTCCGGCTTCGCGGGC +
Preference number: 5 (lower is better)
Translates to: VQRSPRQDFQGWFPT*HPICRCGSSSGFAG
Trigger: GCCCGCGAAGCCGGAGCTCGAGCCGCAGCGGCAGATGGGATGTCAGGTCGGGAACCATCCTTGGAAATCCTGCCGCGGACTTCTCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588703.5
CDS GCA 90 bp CTCTTCTCCTTGTTCCGCAGGATGAGCAGCTGCTGCTCCAGCCGCTaGTTCTCCAGCTCTTCCTGCCGCTGCTGCTCCCGCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LFSLFRRMSSCCSSR*FSSSSCRCCSRCRC
Trigger: GCAGCGGCAGCGGGAGCAGCAGCGGCAGGAAGAGCTGGAGAAGCAGCGGCTGGAGCAGCAGCTGCTCATCCTGCGGAACAAGGAGAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000682912.1
CDS CCA 90 bp CTAGAGGGGCATCCGACCACCAGCCTCTCCCTGGTTCCTGGGAGCTaGGGTATGGCTGAGCACTTGGGACAGGAAGGGGAGCTCAGCGGG +
Preference number: 5 (lower is better)
Translates to: LEGHPTTSLSLVPGS*GMAEHLGQEGELSG
Trigger: CCCGCTGAGCTCCCCTTCCTGTCCCAAGTGCTCAGCCATACCCCAGCTCCCAGGAACCAGGGAGAGGCTGGTGGTCGGATGCCCCTCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591714.5
CDS-3UTR CAA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGAGCTCCTGCTGCCGCTaGGCTGCCAGCATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRSSCCR*AASISC
Trigger: GCAGGAGATGCTGGCAGCCAAGCGGCAGCAGGAGCT...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGTGGGCTCCCCAGCATTaGGGGTGCTGTGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGWAPQH*GCCGRE
Trigger: TTCCCTCCCACAGCACCCCAAATGCTGGGGAGCCCA...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGATGTGCTCATGAACTaGCCGGTCAGCGTGCCACCC +
Preference number: 5 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLDVLMN*PVSVPP
Trigger: GGGTGGCACGCTGACCGGCAAGTTCATGAGCACATC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS GCA 90 bp GGAATAGAGGATGTGCTCATGAACTTGCCGGTCAGCGTGCCACCCTaGCGCAGGGACTGGAGGGCCTGCCTCTCGGCCTCCTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: GIEDVLMNLPVSVPP*RRDWRACLSASCCV
Trigger: GACACAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGGTGGCACGCTGACCGGCAAGTTCATGAGCACATCCTCTATTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS-3UTR CAA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCCATCTGCCGACTCGTaGGGAGAGTTCATGCCGGCT +
Preference number: 5 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLPSADS*GEFMPA
Trigger: AGCCGGCATGAACTCTCCCAACGAGTCGGCAGATGG...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR CAA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGGCAGTGAGGTGTGAGTaGGTGACAGTGACCGTGGCC +
Preference number: 5 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGAVRCE*VTVTVA
Trigger: GGCCACGGTCACTGTCACCAACTCACACCTCACTGC...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGCTGGTGCTGTTGTaGCATGACCAGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLLLVLL*HDQLLQ
Trigger: CTGCAGCAGCTGGTCATGCAACAACAGCACCAGCAG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGCTCGGTCTCACCTGCTaGGGCCTCTCGCAGGGACCG +
Preference number: 5 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKLGLTC*GLSQGP
Trigger: CGGTCCCTGCGAGAGGCCCAAGCAGGTGAGACCGAG...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGACCACCTTCTCCCCTaGCCCAGGCTGTGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LGRHHHPLQREQASRAEVDHLLP*PRLCQQ
Trigger: CTGCTGGCACAGCCTGGGCAAGGGGAGAAGGTGGTC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS GCA 90 bp CTCCTGCTGCCGCTTGGCTGCCAGCATCTCCTGCTGCTGCTTGGCTaGCAGCATCTCCTGCTGCTGCTTGAGGTGCTTCTGCAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LLLPLGCQHLLLLLG*QHLLLLLEVLLQLD
Trigger: GTCCAGCTGCAGAAGCACCTCAAGCAGCAGCAGGAGATGCTGGCAGCCAAGCAGCAGCAGGAGATGCTGGCAGCCAAGCGGCAGCAGGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS CCA 90 bp GGCCCAGGATCCCAGCCTGGCTACCATGATCCTCAGCAGGGCTCATaGAGCTGTCTCCAACCCCCAGGTCCAAACACCTCCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: GPGSQPGYHDPQQGS*SCLQPPGPNTSPWP
Trigger: TGGCCATGGGGAGGTGTTTGGACCTGGGGGTTGGAGACAGCTCCATGAGCCCTGCTGAGGATCATGGTAGCCAGGCTGGGATCCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593013.5
CDS-3UTR CAA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGATGCAGGAAGCTGGCGTaGGGGGCTGGGACGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGCRKLA*GAGTGG
Trigger: CCCTCCCGTCCCAGCCCCCAACGCCAGCTTCCTGCA...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCTGCAGGAAGCTGGCGTaGGGGGCTGGGACGGGAGGG +
Preference number: 5 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLCRKLA*GAGTGG
Trigger: CCCTCCCGTCCCAGCCCCCAACGCCAGCTTCCTGCA...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAACTGGGCATGGCTCTaGGCAGCACCGGCTTCACCT +
Preference number: 5 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELNWAWL*AAPASP
Trigger: AGGTGAAGCCGGTGCTGCCAAGAGCCATGCCCAGTT...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGGACCTCATGCTGCCTaGTCAGGTGGTCATGCTGTT +
Preference number: 5 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLGPHAA*SGGHAV
Trigger: AACAGCATGACCACCTGACAAGGCAGCATGAGGTCC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGAGCTCCTGCTGCCGCTaGGCTGCCAGCATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKSSCCR*AASISC
Trigger: GCAGGAGATGCTGGCAGCCAAGCGGCAGCAGGAGCT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGAGCGTGGCCACTGCGTaGATGTTGGGCTTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGSVATA*MLGFCC
Trigger: GCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS GCA 90 bp AATGTGACGTTAGTCATCCGGCAGGAGCCCCAGCGCCCTTCCTTCTaGACCCACACCCAGCACCCGAGGATGAGGACGACTGGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: NVTLVIRQEPQRPSF*THTQHPRMRTTGVL
Trigger: AAGCACCCCAGTCGTCCTCATCCTCGGGTGCTGGGTGTGGGTGCAGAAGGAAGGGCGCTGGGGCTCCTGCCGGATGACTAACGTCACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS CCA 90 bp AGACCACACCTGGGCCACAGACCTATGTGTCAGCCAGCACTGCTCTaGGCCCAGGATCCCAGCCTGGCTACCATGATCCTCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RPHLGHRPMCQPALL*AQDPSLATMILSRA
Trigger: AGCCCTGCTGAGGATCATGGTAGCCAGGCTGGGATCCTGGGCCCAGAGCAGTGCTGGCTGACACATAGGTCTGTGGCCCAGGTGTGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593013.5
CDS-3UTR CAA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGAACTGGGCATGGCTCTaGGCAGCACCGGCTTCACCT +
Preference number: 5 (lower is better)
Translates to: LGRHHHPLQREQASRAEVNWAWL*AAPASP
Trigger: AGGTGAAGCCGGTGCTGCCAAGAGCCATGCCCAGTT...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGGATGTGCTCATGAACTaGCCGGTCAGCGTGCCACCC +
Preference number: 5 (lower is better)
Translates to: LGRHHHPLQREQASRAEVDVLMN*PVSVPP
Trigger: GGGTGGCACGCTGACCGGCAAGTTCATGAGCACATC...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp TGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGAACTGCTGGTGCTGTaGTTGCATGACCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: WMASPGSLVGPQPLAGLLELLVL*LHDQLL
Trigger: CAGCAGCTGGTCATGCAACAACAGCACCAGCAGTTC...CAGGAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGGCAGCTCCCCTGTCTaGGTGAGGATCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKGSSPV*VRILPS
Trigger: GCTGGGCAAGATCCTCACCAAGACAGGGGAGCTGCC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGAGGTGTCATCTAGCGTGGCTTaGCGACCTCGGATCCGCTCG +
Preference number: 5 (lower is better)
Translates to: LGRHHHPLQREQASRAEVSSSVA*RPRIRS
Trigger: CGAGCGGATCCGAGGTCGCAAAGCCACGCTAGATGA...CACCTCAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR CAA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGCCACTGCGTTGATGTaGGGCTTTTGCTGCAAGACT +
Preference number: 5 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLATALM*GFCCKT
Trigger: AGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS TCA 90 bp GCTCCTCCTTCCCGAATGAGCCGCCGCCGGCAGCTGGCAGGAGACTaGAATAGCAGTTGGGGGAGGGCCCTGTCTATAAATAGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: APPSRMSRRRQLAGD*NSSWGRALSINRWS
Trigger: GCTCCACCTATTTATAGACAGGGCCCTCCCCCAACTGCTATTTCAGTCTCCTGCCAGCTGCCGGCGGCGGCTCATTCGGGAAGGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591714.5
CDS GCA 90 bp TTCTGGAACTCAGCGAACAGGAGCTGCTTCTGCAGCTGCTGCTGCTaGTTGAGCGCCAGGAGCTCCTGCTGCAGTTGCTGCTCCCGCAGT +
Preference number: 5 (lower is better)
Translates to: FWNSANRSCFCSCCC*LSARSSCCSCCSRS
Trigger: ACTGCGGGAGCAGCAACTGCAGCAGGAGCTCCTGGCGCTCAAGCAGCAGCAGCAGCTGCAGAAGCAGCTCCTGTTCGCTGAGTTCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS-3UTR CAA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTACGGCTCCTCCATCTTaGCGGCGGCTCCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPTAPPS*RRLLRL
Trigger: GAGCCGGAGGAGCCGCCGCAAAGATGGAGGAGCCGT...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCCTGGTGTGGGCTCCTTaGACTTCGACAAGAGGAATT +
Preference number: 5 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLLVWAP*TSTRGI
Trigger: AATTCCTCTTGTCGAAGTCAAAGGAGCCCACACCAG...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGAACTGCTGGTGCTGTaGTTGCATGACCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELELLVL*LHDQLL
Trigger: CAGCAGCTGGTCATGCAACAACAGCACCAGCAGTTC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGATGGCAAATCCATTCTaGAGCTCTCCTGCAGCCACC +
Preference number: 5 (lower is better)
Translates to: TGWMASPGSLVGPQPLAGMANPF*SSPAAT
Trigger: GGTGGCTGCAGGAGAGCTCAAGAATGGATTTGCCAT...CCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGACCACCTTCTCCCCTaGCCCAGGCTGTGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLDHLLP*PRLCQQ
Trigger: CTGCTGGCACAGCCTGGGCAAGGGGAGAAGGTGGTC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGCTGGTCTTAGCTCCCTaGGGCTGGTGGTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKLVLAP*GWWSAK
Trigger: CTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAG...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS TCA 90 bp GCATCTCCTGCTGCTGCTTGGCTGCCAGCATCTCCTGCTGCTGCTTaGGGTGCTTCTGCAGCTGGACCTCATGCTGCCTTGTCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: ASPAAAWLPASPAAA*GASAAGPHAALSGG
Trigger: ACCACCTGACAAGGCAGCATGAGGTCCAGCTGCAGAAGCACCTCAAGCAGCAGCAGGAGATGCTGGCAGCCAAGCAGCAGCAGGAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS GCA 90 bp GCTTGGGCCTCTCGCAGGGACCGGCCCAGACCAGCGGCGAACTTCTaGACACAGCTCCAGTGTTTGCTCTGGATCTCGATGACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: AWASRRDRPRPAANF*TQLQCLLWISMTFS
Trigger: AGAGAAAGTCATCGAGATCCAGAGCAAACACTGGAGCTGTGTGCAGAAGTTCGCCGCTGGTCTGGGCCGGTCCCTGCGAGAGGCCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS-3UTR CAA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGATCTCCTGCTGCTGCTaGAGGTGCTTCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKISCCC*RCFCSW
Trigger: CCAGCTGCAGAAGCACCTCAAGCAGCAGCAGGAGAT...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGGGTTCAGAGGCTGTTTaGCGGAGGGGGAAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKGSEAV*RRGKSS
Trigger: AGACGACTTCCCCCTCCGCAAAACAGCCTCTGAACC...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGGCTCGAACGCACTTTCAAGTaGGGTTCAGAGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: GWMASPGSLVGPQPLAGLERTFK*GSEAVL
Trigger: CAAAACAGCCTCTGAACCCAACTTGAAAGTGCGTTC...GAGCCCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGATCTCAGTGGGGATGTaGGGGACTGAGCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELISVGM*GTEPVK
Trigger: CTTTACTGGCTCAGTCCCCAACATCCCCACTGAGAT...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCCGGATCCGCTCGCACTaGCTAAGCAGGCCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLRIRSH*LSRPVS
Trigger: GGAGACAGGCCTGCTTAGCAAGTGCGAGCGGATCCG...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR CAA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGCCACTGCGTTGATGTaGGGCTTTTGCTGCAAGACT +
Preference number: 5 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELATALM*GFCCKT
Trigger: AGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS CCA 90 bp TGCCCCCTTGGCAGCCTGAGCCCCTCTACGTGTCCTCACGCACTCTaGATCTCGATGACTTTCTCTAGCGTGGCCACTGCGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: CPLGSLSPSTCPHAL*ISMTFSSVATALML
Trigger: CAACATCAACGCAGTGGCCACGCTAGAGAAAGTCATCGAGATCCAGAGTGCGTGAGGACACGTAGAGGGGCTCAGGCTGCCAAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586339.1
CDS-3UTR CAA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCGATGCCGCGGGAGCTaGCCTACCGTCCGCATGCTG +
Preference number: 5 (lower is better)
Translates to: RQSKEWVYMRTRPATGRERCRGS*PTVRML
Trigger: CAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTGGCAGCTCCCCTGTCTaGGTGAGGATCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPGSSPV*VRILPS
Trigger: GCTGGGCAAGATCCTCACCAAGACAGGGGAGCTGCC...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCGGGCCGAGCAACTTCTaGCTGTCTAGCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLGPSNF*LSSFCR
Trigger: CCGGCAGAAGCTAGACAGCAAGAAGTTGCTCGGCCC...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS-3UTR CAA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCATCTCCTGCTGCTGCTaGAGGTGCTTCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSISCCC*RCFCSW
Trigger: CCAGCTGCAGAAGCACCTCAAGCAGCAGCAGGAGAT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGTGGGAGGGAATGGTaGAGGCCGCCTGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: RQSKEWVYMRTRPATGRECGREW*RPPGVG
Trigger: GCCCACACCAGGCGGCCTCAACCATTCCCTCCCACA...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CAGGGCTGGGAAGACACCACCACCCCCTGCAGAGGGAGCAGGCTTCTAGAGCTGGAACGCACTTTCAAGTaGGGTTCAGAGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: QGWEDTTTPCRGSRLLELERTFK*GSEAVL
Trigger: CAAAACAGCCTCTGAACCCAACTTGAAAGTGCGTTC...CAGCTCTAGAAGCCTGCTCCCTCTGCAGGGGGTGGTGGTGTCTTCCCAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAATAACAGTCCCATCCTaGCGACGCAGGAGGGGACTG +
Preference number: 5 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGITVPS*RRRRGL
Trigger: CAGTCCCCTCCTGCGTCGCAAGGATGGGACTGTTAT...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCATAACAGTCCCATCCTaGCGACGCAGGAGGGGACTG +
Preference number: 5 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLITVPS*RRRRGL
Trigger: CAGTCCCCTCCTGCGTCGCAAGGATGGGACTGTTAT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp TACAGGCTGGATGGCATCCCCTGGAAGCCTTGTAGGCCCACAGCCCCTGGCAGGTCTGAGAACAGTTTTTaGTATCCAGCACCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: YRLDGIPWKPCRPTAPGRSENSF*YPAPGS
Trigger: GGAGCCTGGTGCTGGATACAAAAAACTGTTCTCAGA...CCTGCCAGGGGCTGTGGGCCTACAAGGCTTCCAGGGGATGCCATCCAGCCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCCATGCCACGTTCACATaGTACCCCACGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLHATFT*YPTPGP
Trigger: AGGACCAGGCGTGGGGTACAATGTGAACGTGGCATG...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CCCCTCCTGGTCTTAGCTCCCTTGGGCTGGTGGTCAGCAAAGGGAGCCCAGAAGGTTGATGTTGGGCTTTaGCTGCAAGACTGCCTCATC +
Preference number: 5 (lower is better)
Translates to: PLLVLAPLGWWSAKGAQKVDVGL*LQDCLI
Trigger: GATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAAC...CTTCTGGGCTCCCTTTGCTGACCACCAGCCCAAGGGAGCTAAGACCAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCAGCGTGGCCACTGCGTaGATGTTGGGCTTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLSVATA*MLGFCC
Trigger: GCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCT...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCATCCCATCCGACTCGTaGGGAGAGTTCATGCCGGCT +
Preference number: 5 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSIPSDS*GEFMPA
Trigger: AGCCGGCATGAACTCTCCCAACGAGTCGGATGGGAT...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336057.9
CDS TCA 90 bp GTGCTGTGGGAGGGAATGGTTGAGGCCGCCTGGTGTGGGCTCCTTTaGCTTCGACAAGAGGAATTCCTGGAGCCTCAGCTTTACCTCAGT +
Preference number: 5 (lower is better)
Translates to: VLWEGMVEAAWCGLL*LRQEEFLEPQLYLS
Trigger: ACTGAGGTAAAGCTGAGGCTCCAGGAATTCCTCTTGTCGAAGTCAAAGGAGCCCACACCAGGCGGCCTCAACCATTCCCTCCCACAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000682912.1
CDS-3UTR CAA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGCTCCCCAGCATTaGGGGTGCTGTGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: RQSKEWVYMRTRPATGREWAPQH*GCCGRE
Trigger: TTCCCTCCCACAGCACCCCAAATGCTGGGGAGCCCA...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGCAGTGAGGTGTGAGTaGGTGACAGTGACCGTGGCC +
Preference number: 5 (lower is better)
Translates to: QSKEWVYMRTRPATGREWAVRCE*VTVTVA
Trigger: GGCCACGGTCACTGTCACCAACTCACACCTCACTGC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCTGCTGGTGCTGTTGTaGCATGACCAGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPLLVLL*HDQLLQ
Trigger: CTGCAGCAGCTGGTCATGCAACAACAGCACCAGCAG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS CCA 90 bp AGGCCGCCTGGTGTGGGCTCCTTTGACTTCGACAAGAGGAATTCCTaGAGCCTCAGCTTTACCTCAGTGCTGGCAATGGCACTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RPPGVGSFDFDKRNS*SLSFTSVLAMALSL
Trigger: CAAAGAGAGTGCCATTGCCAGCACTGAGGTAAAGCTGAGGCTCCAGGAATTCCTCTTGTCGAAGTCAAAGGAGCCCACACCAGGCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000682912.1
CDS-3UTR CAA 90 bp GGAGGAGGAAGGAAGAGTCAGCCCCCTAGGAGCCACTTCCCATCTTTGGTTTCCGCAATGGCACTCTCTTaGCTCTTCTCCTTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: GGGRKSQPPRSHFPSLVSAMALS*LFSLFR
Trigger: GCGGAACAAGGAGAAGAGCAAAGAGAGTGCCATTGC...GGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCCTTCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp GGGTGGAGAATCGCAGGGTGGGTGCCCACCTCCCCTCCACTCTGCATCTTAAAGTCTGAGAACAGTTTTTaGTATCCAGCACCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: GWRIAGWVPTSPPLCILKSENSF*YPAPGS
Trigger: GGAGCCTGGTGCTGGATACAAAAAACTGTTCTCAGA...CTTTAAGATGCAGAGTGGAGGGGAGGTGGGCACCCACCCTGCGATTCTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS GCA 90 bp TCGATGACTTTCTCTAGCGTGGCCACTGCGTTGATGTTGGGCTTTTaGTGCAAGACTGCCTCATCCAAGGGCTGCAGCTCTACACTGAGC +
Preference number: 5 (lower is better)
Translates to: SMTFSSVATALMLGF*CKTASSKGCSSTLS
Trigger: GCTCAGTGTAGAGCTGCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGAGAAAGTCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586339.1
ENST00000586802.5
ENST00000682912.1
CDS CCA 90 bp AGAATTGGGCTTCCAAGAGATTTTGTCCTTCCTGAGGCTTGGTCCTaGCTACTTCCCCAGCTCACAGAGAGTGGTGTGTGCCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RIGLPRDFVLPEAWS*LLPQLTESGVCLCL
Trigger: GAGGCAGAGGCACACACCACTCTCTGTGAGCTGGGGAAGTAGCCAGGACCAAGCCTCAGGAAGGACAAAATCTCTTGGAAGCCCAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS-3UTR CAA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGGTTCAGAGGCTGTTTaGCGGAGGGGGAAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: RQSKEWVYMRTRPATGREGSEAV*RRGKSS
Trigger: AGACGACTTCCCCCTCCGCAAAACAGCCTCTGAACC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGCATGCCACGTTCACATaGTACCCCACGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: RQSKEWVYMRTRPATGREHATFT*YPTPGP
Trigger: AGGACCAGGCGTGGGGTACAATGTGAACGTGGCATG...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CCCTGGGTTCTGGCCTTACCCCTTCTAGAACCTCCATTCTCACCATCCCCAGGAGTTGATGTTGGGCTTTaGCTGCAAGACTGCCTCATC +
Preference number: 5 (lower is better)
Translates to: PWVLALPLLEPPFSPSPGVDVGL*LQDCLI
Trigger: GATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAAC...TCCTGGGGATGGTGAGAATGGAGGTTCTAGAAGGGGTAAGGCCAGAACCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS GCA 90 bp ATGACTTTCTCTAGCGTGGCCACTGCGTTGATGTTGGGCTTTTGCTaGAAGACTGCCTCATCCAAGGGCTGCAGCTCTACACTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: MTFSSVATALMLGFC*KTASSKGCSSTLSR
Trigger: TCTGCTCAGTGTAGAGCTGCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGAGAAAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586339.1
ENST00000586802.5
ENST00000682912.1
CDS-3UTR CAA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGGGACCTCATGCTGCCTaGTCAGGTGGTCATGCTGTT +
Preference number: 5 (lower is better)
Translates to: RQSKEWVYMRTRPATGREGPHAA*SGGHAV
Trigger: AACAGCATGACCACCTGACAAGGCAGCATGAGGTCC...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGGCAATGGCACTCTCTTaGCTCTTCTCCTTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: QSKEWVYMRTRPATGREWAMALS*LFSLFR
Trigger: GCGGAACAAGGAGAAGAGCAAAGAGAGTGCCATTGC...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGATCTCAGTGGGGATGTaGGGGACTGAGCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: QSKEWVYMRTRPATGREWISVGM*GTEPVK
Trigger: CTTTACTGGCTCAGTCCCCAACATCCCCACTGAGAT...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS GCA 90 bp ATGGCGGCAGCGTCACTACCGTTCAAGGTAGGAAATCCCCTTCGTTaGTTGAAACTGCAACGTGAGGGCCAAGATGGAACAGGAGCTAAA +
Preference number: 5 (lower is better)
Translates to: MAAASLPFKVGNPLR*LKLQREGQDGTGAK
Trigger: TTTAGCTCCTGTTCCATCTTGGCCCTCACGTTGCAGTTTCAAGCAACGAAGGGGATTTCCTACCTTGAACGGTAGTGACGCTGCCGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS-3UTR CAA 90 bp CAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGTGGCTGGTGTGGGCTCCTTaGACTTCGACAAGAGGAATT +
Preference number: 5 (lower is better)
Translates to: QSKEWVYMRTRPATGREWLVWAP*TSTRGI
Trigger: AATTCCTCTTGTCGAAGTCAAAGGAGCCCACACCAG...CCACTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp ACCTGGTTCTGTTACTCCTCCTGGCCCCTGAGAACCCAGGAAACCAGTCCTCTCCCTTCTGTTTTAGCCTaGAACGCACTTTCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: TWFCYSSWPLRTQETSPLPSVLA*NALSSW
Trigger: CCAACTTGAAAGTGCGTTCAAGGCTAAAACAGAAGG...GAGAGGACTGGTTTCCTGGGTTCTCAGGGGCCAGGAGGAGTAACAGAACCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS-3UTR CAA 90 bp AGACAAAGCAAGGAGTGGGTTTACATGAGAACCAGACCAGCCACAGGGAGAGAGATGGCAAATCCATTCTaGAGCTCTCCTGCAGCCACC +
Preference number: 5 (lower is better)
Translates to: RQSKEWVYMRTRPATGREMANPF*SSPAAT
Trigger: GGTGGCTGCAGGAGAGCTCAAGAATGGATTTGCCAT...CTCTCTCCCTGTGGCTGGTCTGGTTCTCATGTAAACCCACTCCTTGCTTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS CCA 90 bp ACTCATTGTGTTCCTGGTATACAGTCTGCTCCTAATTGTAGGGGGTaGGAGGAAATATCGGCTACTAGCAATGGCGGCAGCGTCACTACC +
Preference number: 5 (lower is better)
Translates to: THCVPGIQSAPNCRG*EEISATSNGGSVTT
Trigger: GGTAGTGACGCTGCCGCCATTGCTAGTAGCCGATATTTCCTCCCACCCCCTACAATTAGGAGCAGACTGTATACCAGGAACACAATGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS-3UTR CAA 90 bp AGCCACTTCCCATCTTTGGTTTCCTACAGGCTGGATGGCATCCCCTGGAAGCCTCCTTCTGTTTTAGCCTaGAACGCACTTTCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: SHFPSLVSYRLDGIPWKPPSVLA*NALSSW
Trigger: CCAACTTGAAAGTGCGTTCAAGGCTAAAACAGAAGG...AGGCTTCCAGGGGATGCCATCCAGCCTGTAGGAAACCAAAGATGGGAAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225983.10
ENST00000336057.9
CDS CCA 72 bp GCGCTCACAGTCTCGGCCTCCTCGGTCTCACCTGCTTaGGCCTCTCGCAGGGACCGGCCCAGACCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: ALTVSASSVSPA*ASRRDRPRPAA
Trigger: CGCCGCTGGTCTGGGCCGGTCCCTGCGAGAGGCCCAAGCAGGTGAGACCGAGGAGGCCGAGACTGTGAGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS CCA 72 bp CGGGACCCACACTGTAGGGAAGTGCCTCATCCGGCCTaGGCACTCCTGGCGGCAGGAGGGGCAGGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: RDPHCREVPHPA*ALLAAGGAGRP
Trigger: GGGCCTCCCTGCCCCTCCTGCCGCCAGGAGTGCCCAGGCCGGATGAGGCACTTCCCTACAGTGTGGGTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591714.5
CDS CAA 72 bp GGCGCTCACAGTCTCGGCCTCCTCGGTCTCACCTGCTaGGGCCTCTCGCAGGGACCGGCCCAGACCAGCGGC +
Preference number: 6 (lower is better)
Translates to: GAHSLGLLGLTC*GLSQGPAQTSG
Trigger: GCCGCTGGTCTGGGCCGGTCCCTGCGAGAGGCCCAAGCAGGTGAGACCGAGGAGGCCGAGACTGTGAGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS TCA 72 bp TACGGCCCAGGGCCTGGTGGGGCACAGTGGCCAGGCTaGGGGGCGCCTGGTACACCTGCAAAGGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: YGPGPGGAQWPG*GAPGTPAKAAA
Trigger: CGCTGCAGCCTTTGCAGGTGTACCAGGCGCCCCTCAGCCTGGCCACTGTGCCCCACCAGGCCCTGGGCCGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588419.1
ENST00000592385.5
ENST00000682912.1
CDS CCA 72 bp CCTGGGCCTGCTCGGCCCCCACCGACAGCAAGGCCATaGCGCTCACAGTCTCGGCCTCCTCGGTCTCACCTG +
Preference number: 6 (lower is better)
Translates to: PGPARPPPTARP*RSQSRPPRSHL
Trigger: CAGGTGAGACCGAGGAGGCCGAGACTGTGAGCGCCATGGCCTTGCTGTCGGTGGGGGCCGAGCAGGCCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS GCA 72 bp GGGGCCGATGCCGCGGGAGCTTGCCTACCGTCCGCATaGTGGTGGCCACACGTTCACCCGTCACTAGTGGGG +
Preference number: 6 (lower is better)
Translates to: GADAAGACLPSA*WWPHVHPSLVG
Trigger: CCCCACTAGTGACGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 72 bp CATGGCGCTCACAGTCTCGGCCTCCTCGGTCTCACCTaGTTGGGCCTCTCGCAGGGACCGGCCCAGACCAGC +
Preference number: 6 (lower is better)
Translates to: HGAHSLGLLGLT*LGLSQGPAQTS
Trigger: GCTGGTCTGGGCCGGTCCCTGCGAGAGGCCCAAGCAGGTGAGACCGAGGAGGCCGAGACTGTGAGCGCCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS CCA 72 bp AACTTGCCGGTCAGCGTGCCACCCTGCCGCAGGGACTaGAGGGCCTGCCTCTCGGCCTCCTGCTGTGTCGAC +
Preference number: 6 (lower is better)
Translates to: NLPVSVPPCRRD*RACLSASCCVD
Trigger: GTCGACACAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGGTGGCACGCTGACCGGCAAGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 72 bp TGCCGCAGGGACTGGAGGGCCTGCCTCTCGGCCTCCTaGTGTGTCGACAGCTTCGGGGAGGCAGTGAGGTGT +
Preference number: 6 (lower is better)
Translates to: CRRDWRACLSAS*CVDSFGEAVRC
Trigger: ACACCTCACTGCCTCCCCGAAGCTGTCGACACAGCAGGAGGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 72 bp GATGTGCTCATGAACTTGCCGGTCAGCGTGCCACCCTaGCGCAGGGACTGGAGGGCCTGCCTCTCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: DVLMNLPVSVPP*RRDWRACLSAS
Trigger: GGAGGCCGAGAGGCAGGCCCTCCAGTCCCTGCGGCAGGGTGGCACGCTGACCGGCAAGTTCATGAGCACATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 72 bp ACTGAGTGCGGCTCAGGGGCCGATGCCGCGGGAGCTTaGCTACCGTCCGCATGCTGGTGGCCACACGTTCAC +
Preference number: 6 (lower is better)
Translates to: TECGSGADAAGA*LPSACWWPHVH
Trigger: GTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCGGCCCCTGAGCCGCACTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS CCA 72 bp CCCTGGTTCCTGGGAGCTGGGGTATGGCTGAGCACTTaGGACAGGAAGGGGAGCTCAGCGGGCAGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: PWFLGAGVWLST*DRKGSSAGRRA
Trigger: AGCCCGCCTGCCCGCTGAGCTCCCCTTCCTGTCCCAAGTGCTCAGCCATACCCCAGCTCCCAGGAACCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591714.5
CDS CCA 72 bp AGATGGTCTGCAGCATCTCCACGAGCCCCTGAGCCTTaGGCACCAGCAGCATGCCAGGGAGGGGGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: RWSAASPRAPEP*APAACQGGGRQ
Trigger: CTGGCGGCCCCCTCCCTGGCATGCTGCTGGTGCCCAAGGCTCAGGGGCTCGTGGAGATGCTGCAGACCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591714.5
CDS GCA 72 bp GGCACAGTGGCCAGGCTGAGGGGCGCCTGGTACACCTaGAAAGGCTGCAGCGGCTGGGCATCTGAGAACAGC +
Preference number: 6 (lower is better)
Translates to: GTVARLRGAWYT*KGCSGWASENS
Trigger: GCTGTTCTCAGATGCCCAGCCGCTGCAGCCTTTGCAGGTGTACCAGGCGCCCCTCAGCCTGGCCACTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588419.1
CDS CCA 72 bp CATCTGCCGACTCGTTGGGAGAGTTCATGCCGGCTCTaGGCCTGCAGGAAGCTGGCGTTGGGGGCTGGGACG +
Preference number: 6 (lower is better)
Translates to: HLPTRWESSCRL*ACRKLALGAGT
Trigger: CGTCCCAGCCCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACGAGTCGGCAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS CCA 72 bp TCTCAGCGATGGTGCTGTGGGAGCTGTTGGGAGAGCTaGGGCCGGAGCCGGGTGCGCTGTTACACACGGACG +
Preference number: 6 (lower is better)
Translates to: SQRWCCGSCWES*GRSRVRCYTRT
Trigger: CGTCCGTGTGTAACAGCGCACCCGGCTCCGGCCCCAGCTCTCCCAACAGCTCCCACAGCACCATCGCTGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000682912.1
CDS CCA 72 bp GATGCCGCGGGAGCTTGCCTACCGTCCGCATGCTGGTaGCCACACGTTCACCCGTCACTAGTGGGGACTGCC +
Preference number: 6 (lower is better)
Translates to: DAAGACLPSACW*PHVHPSLVGTA
Trigger: GGCAGTCCCCACTAGTGACGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS CCA 72 bp GCCGATGCCGCGGGAGCTTGCCTACCGTCCGCATGCTaGTGGCCACACGTTCACCCGTCACTAGTGGGGACT +
Preference number: 6 (lower is better)
Translates to: ADAAGACLPSAC*WPHVHPSLVGT
Trigger: AGTCCCCACTAGTGACGGGTGAACGTGTGGCCACCAGCATGCGGACGGTAGGCAAGCTCCCGCGGCATCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS CCA 72 bp GTGTGCTCTCACTCTCTGTGGAGCCCTCCCGGGGCATaGTCAGGGCTCCCTCCCCCAGCAAGACCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: VCSHSLWSPPGA*SGLPPPARPPA
Trigger: AGCAGGAGGTCTTGCTGGGGGAGGGAGCCCTGACCATGCCCCGGGAGGGCTCCACAGAGAGTGAGAGCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000592385.5
ENST00000682912.1
CDS CCA 72 bp TCCCATCCGACTCGTTGGGAGAGTTCATGCCGGCTCTaGGCCTGCAGGAAGCTGGCGTTGGGGGCTGGGACG +
Preference number: 6 (lower is better)
Translates to: SHPTRWESSCRL*ACRKLALGAGT
Trigger: CGTCCCAGCCCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACGAGTCGGATGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS CAA 72 bp GGGTGGGTGGTGGGCTGCCTGGGCAGCTCCCCTGTCTaGGTGAGGATCTTGCCCAGCTGTAGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GWVVGCLGSSPV*VRILPSCSCCC
Trigger: GCAGCAGCAGCTACAGCTGGGCAAGATCCTCACCAAGACAGGGGAGCTGCCCAGGCAGCCCACCACCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000592385.5
ENST00000682912.1
CDS TCA 72 bp AGTCCGCGGCAGGATTTCCAAGGATGGTTCCCGACCTaGCATCCCATCTGCCGCTGCGGCTCGAGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: SPRQDFQGWFPT*HPICRCGSSSG
Trigger: GCCGGAGCTCGAGCCGCAGCGGCAGATGGGATGTCAGGTCGGGAACCATCCTTGGAAATCCTGCCGCGGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588703.5
CDS GCA 72 bp TGCAGCTGCTGCTGCTGCTTGAGCGCCAGGAGCTCCTaGTGCAGTTGCTGCTCCCGCAGTGTGGGGTCCACA +
Preference number: 6 (lower is better)
Translates to: CSCCCCLSARSS*CSCCSRSVGST
Trigger: TGTGGACCCCACACTGCGGGAGCAGCAACTGCAGCAGGAGCTCCTGGCGCTCAAGCAGCAGCAGCAGCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS GCA 72 bp GGCACAGTGGCCAGGCTGAGGGGCGCCTGGTACACCTaGAAAGGCTGCAGCGGCTGGGCATCTGAGAACAGT +
Preference number: 6 (lower is better)
Translates to: GTVARLRGAWYT*KGCSGWASENS
Trigger: ACTGTTCTCAGATGCCCAGCCGCTGCAGCCTTTGCAGGTGTACCAGGCGCCCCTCAGCCTGGCCACTGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000592385.5
ENST00000682912.1
CDS CCA 72 bp AGCTGTCTCCAACCCCCAGGTCCAAACACCTCCCCATaGCCACTGCAGCCACCCTGCCACAAACCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: SCLQPPGPNTSP*PLQPPCHKPAP
Trigger: GGGGGCAGGTTTGTGGCAGGGTGGCTGCAGTGGCCATGGGGAGGTGTTTGGACCTGGGGGTTGGAGACAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593013.5
CDS CCA 72 bp GAGGGCAGAGGACACCCACATGAACAGTCCCAGTCCTaGTGCTCCCACAAGCTCCGTGCCCCCTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: EGRGHPHEQSQS*CSHKLRAPLAA
Trigger: GGCTGCCAAGGGGGCACGGAGCTTGTGGGAGCACCAGGACTGGGACTGTTCATGTGGGTGTCCTCTGCCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586339.1
CDS TCA 72 bp TGGTGCTCCCACAAGCTCCGTGCCCCCTTGGCAGCCTaGGCCCCTCTACGTGTCCTCACGCACTCTGGATCT +
Preference number: 6 (lower is better)
Translates to: WCSHKLRAPLAA*APLRVLTHSGS
Trigger: AGATCCAGAGTGCGTGAGGACACGTAGAGGGGCTCAGGCTGCCAAGGGGGCACGGAGCTTGTGGGAGCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586339.1
CDS GCA 72 bp CTGACATCCCATCTGCCGACTCGTTGGGAGAGTTCATaGCGGCTCTGGGCCTGCAGGAAGCTGGCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: LTSHLPTRWESS*RLWACRKLALG
Trigger: CCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACGAGTCGGCAGATGGGATGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS GCA 72 bp CTGGTGGCCACACGTTCACCCGTCACTAGTGGGGACTaGCCGTGGAGTGGCACAGCAATGAGGGTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LVATRSPVTSGD*PWSGTAMRVLC
Trigger: GCAGAGCACCCTCATTGCTGTGCCACTCCACGGGCAGTCCCCACTAGTGACGGGTGAACGTGTGGCCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000592385.5
ENST00000682912.1
CDS GCA 72 bp GACCTGACATCCCATCCGACTCGTTGGGAGAGTTCATaGCGGCTCTGGGCCTGCAGGAAGCTGGCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: DLTSHPTRWESS*RLWACRKLALG
Trigger: CCCCAACGCCAGCTTCCTGCAGGCCCAGAGCCGGCATGAACTCTCCCAACGAGTCGGATGGGATGTCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS CCA 72 bp AGAAGCATGGTGGGCTCCCCAGCATTTGGGGTGCTGTaGGAGGGAATGGTTGAGGCCGCCTGGTGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: RSMVGSPAFGVL*EGMVEAAWCGL
Trigger: GAGCCCACACCAGGCGGCCTCAACCATTCCCTCCCACAGCACCCCAAATGCTGGGGAGCCCACCATGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000682912.1
CDS CAA 90 bp GTCTCCTCAGGGTGGGTGGTGGGCTGCCTGGGCAGCTCCCCTGTCTaGGTGAGGATCTTGCCCAGCTGTAGCTGCTGCTGCTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: VSSGWVVGCLGSSPV*VRILPSCSCCCFCF
Trigger: GAAGCAGAAGCAGCAGCAGCTACAGCTGGGCAAGATCCTCACCAAGACAGGGGAGCTGCCCAGGCAGCCCACCACCCACCCTGAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000592385.5
ENST00000682912.1
CDS GCA 72 bp TCTCGCAGGGACCGGCCCAGACCAGCGGCGAACTTCTaGACACAGCTCCAGTGTTTGCCTGTGGACGAGAGA +
Preference number: 6 (lower is better)
Translates to: SRRDRPRPAANF*TQLQCLPVDER
Trigger: TCTCTCGTCCACAGGCAAACACTGGAGCTGTGTGCAGAAGTTCGCCGCTGGTCTGGGCCGGTCCCTGCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586339.1
CDS CCA 72 bp TGGGCTCCCCAGCATTTGGGGTGCTGTGGGAGGGAATaGTTGAGGCCGCCTGGTGTGGGCTCCTTTGACTTC +
Preference number: 6 (lower is better)
Translates to: WAPQHLGCCGRE*LRPPGVGSFDF
Trigger: GAAGTCAAAGGAGCCCACACCAGGCGGCCTCAACCATTCCCTCCCACAGCACCCCAAATGCTGGGGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000682912.1
CDS CCA 72 bp CTGGGCCACAGACCTATGTGTCAGCCAGCACTGCTCTaGGCCCAGGATCCCAGCCTGGCTACCATGATCCTC +
Preference number: 6 (lower is better)
Translates to: LGHRPMCQPALL*AQDPSLATMIL
Trigger: GAGGATCATGGTAGCCAGGCTGGGATCCTGGGCCCAGAGCAGTGCTGGCTGACACATAGGTCTGTGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593013.5
CDS CAA 72 bp GCTCCCCAGCATTTGGGGTGCTGTGGGAGGGAATGGTaGAGGCCGCCTGGTGTGGGCTCCTTTGACTTCGAC +
Preference number: 6 (lower is better)
Translates to: APQHLGCCGREW*RPPGVGSFDFD
Trigger: GTCGAAGTCAAAGGAGCCCACACCAGGCGGCCTCAACCATTCCCTCCCACAGCACCCCAAATGCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000682912.1
CDS TCA 72 bp CTCCCCAGCATTTGGGGTGCTGTGGGAGGGAATGGTTaGGGCCGCCTGGTGTGGGCTCCTTTGACTTCGACA +
Preference number: 6 (lower is better)
Translates to: LPSIWGAVGGNG*GRLVWAPLTST
Trigger: TGTCGAAGTCAAAGGAGCCCACACCAGGCGGCCTCAACCATTCCCTCCCACAGCACCCCAAATGCTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000682912.1
CDS TCA 72 bp AGTCCGCGGCAGGATTTCCAAGGATGGTTCCCGACCTaGCATCCCATCTGCTGTAGGGAAGGCGCCCCTGTC +
Preference number: 6 (lower is better)
Translates to: SPRQDFQGWFPT*HPICCREGAPV
Trigger: GACAGGGGCGCCTTCCCTACAGCAGATGGGATGTCAGGTCGGGAACCATCCTTGGAAATCCTGCCGCGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587135.1
CDS GCA 72 bp TCTCGCAGGGACCGGCCCAGACCAGCGGCGAACTTCTaGACACAGCTCCAGTGTTTGCTCTGGATCTCGATG +
Preference number: 6 (lower is better)
Translates to: SRRDRPRPAANF*TQLQCLLWISM
Trigger: CATCGAGATCCAGAGCAAACACTGGAGCTGTGTGCAGAAGTTCGCCGCTGGTCTGGGCCGGTCCCTGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS GCA 72 bp GACCAGCGGCGAACTTCTGCACACAGCTCCAGTGTTTaGCTGTGGACGAGAGACAGGCAAGGGGTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: DQRRTSAHSSSV*LWTRDRQGVRE
Trigger: CTCCCTGACCCCTTGCCTGTCTCTCGTCCACAGGCAAACACTGGAGCTGTGTGCAGAAGTTCGCCGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586339.1
CDS CCA 72 bp TCCCAGCCTGGCTACCATGATCCTCAGCAGGGCTCATaGAGCTGTCTCCAACCCCCAGGTCCAAACACCTCC +
Preference number: 6 (lower is better)
Translates to: SQPGYHDPQQGS*SCLQPPGPNTS
Trigger: GGAGGTGTTTGGACCTGGGGGTTGGAGACAGCTCCATGAGCCCTGCTGAGGATCATGGTAGCCAGGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593013.5
CDS CCA 72 bp GGCAGCCTGAGCCCCTCTACGTGTCCTCACGCACTCTaGATCTCGATGACTTTCTCTAGCGTGGCCACTGCG +
Preference number: 6 (lower is better)
Translates to: GSLSPSTCPHAL*ISMTFSSVATA
Trigger: CGCAGTGGCCACGCTAGAGAAAGTCATCGAGATCCAGAGTGCGTGAGGACACGTAGAGGGGCTCAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586339.1
CDS CAA 90 bp AGCATCTCCTGCTGCTGCTTGGCTGCCAGCATCTCCTGCTGCTGCTaGAGGTGCTTCTGCAGCTGGACCTCATGCTGCCTTGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: SISCCCLAASISCCC*RCFCSWTSCCLVRW
Trigger: CCACCTGACAAGGCAGCATGAGGTCCAGCTGCAGAAGCACCTCAAGCAGCAGCAGGAGATGCTGGCAGCCAAGCAGCAGCAGGAGATGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS TCA 72 bp TCCCGAATGAGCCGCCGCCGGCAGCTGGCAGGAGACTaGAATAGCAGTTGGGGGAGGGCCCTGTCTATAAAT +
Preference number: 6 (lower is better)
Translates to: SRMSRRRQLAGD*NSSWGRALSIN
Trigger: ATTTATAGACAGGGCCCTCCCCCAACTGCTATTTCAGTCTCCTGCCAGCTGCCGGCGGCGGCTCATTCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591714.5
CDS CCA 72 bp TCCTCAGCACCACTCTCGCCCTCCTCGTCCTTAACCTaGATGCAATCCTCCTCCTCCTCCCCATCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: SSAPLSPSSSLT*MQSSSSSPSSS
Trigger: GGAAGACGATGGGGAGGAGGAGGAGGATTGCATCCAGGTTAAGGACGAGGAGGGCGAGAGTGGTGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000592385.5
ENST00000682912.1
CDS CCA 72 bp CCGATGCCCCCACAAGGCAGCACAGCATACATCTTCTaGCTGATGGGGCCTGTGGTGAAGAGGTGCTTGACG +
Preference number: 6 (lower is better)
Translates to: PMPPQGSTAYIF*LMGPVVKRCLT
Trigger: CGTCAAGCACCTCTTCACCACAGGCCCCATCAGCCAGAAGATGTATGCTGTGCTGCCTTGTGGGGGCATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336057.9
CDS CAA 72 bp AGACCAGCGGCGAACTTCTGCACACAGCTCCAGTGTTaGCCTGTGGACGAGAGACAGGCAAGGGGTCAGGGA +
Preference number: 6 (lower is better)
Translates to: RPAANFCTQLQC*PVDERQARGQG
Trigger: TCCCTGACCCCTTGCCTGTCTCTCGTCCACAGGCAAACACTGGAGCTGTGTGCAGAAGTTCGCCGCTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586339.1
CDS GCA 72 bp AGCACCGGCTTCACCTCCACTGTCACAGGGATGCTGTaGAGAGAAGTCCGCGGCAGGATTTCCAAGGATGGT +
Preference number: 6 (lower is better)
Translates to: STGFTSTVTGML*REVRGRISKDG
Trigger: ACCATCCTTGGAAATCCTGCCGCGGACTTCTCTGCACAGCATCCCTGTGACAGTGGAGGTGAAGCCGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587135.1
ENST00000588703.5
ENST00000591714.5
ENST00000682912.1
CDS TCA 72 bp AGTCCGCGGCAGGATTTCCAAGGATGGTTCCCGACCTaGCATCCCATCTGCCGACTCGTTGGGAGAGTTCAT +
Preference number: 6 (lower is better)
Translates to: SPRQDFQGWFPT*HPICRLVGRVH
Trigger: ATGAACTCTCCCAACGAGTCGGCAGATGGGATGTCAGGTCGGGAACCATCCTTGGAAATCCTGCCGCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225983.10
CDS TCA 72 bp GAGGGAATGGTTGAGGCCGCCTGGTGTGGGCTCCTTTaGCTTCGACAAGAGGAATTCCTGGAGCCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: EGMVEAAWCGLL*LRQEEFLEPQL
Trigger: AAGCTGAGGCTCCAGGAATTCCTCTTGTCGAAGTCAAAGGAGCCCACACCAGGCGGCCTCAACCATTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000588261.1
ENST00000682912.1
CDS TCA 72 bp GTGCTGAGGGAGCATCTCAGTGGGGATGTTGGGGACTaGGCCAGTAAAGCCATTCTCAGCGATGGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: VLREHLSGDVGD*ASKAILSDGAV
Trigger: CACAGCACCATCGCTGAGAATGGCTTTACTGGCTCAGTCCCCAACATCCCCACTGAGATGCTCCCTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000588261.1
ENST00000682912.1
CDS TCA 72 bp CCAACAACAACATTCGGAGACGTCACTCCCGTCACGTaGCCCGACCCGGAGCTAAAAATAGACCCAGACCCC +
Preference number: 6 (lower is better)
Translates to: PTTTFGDVTPVT*PDPELKIDPDP
Trigger: GGGGTCTGGGTCTATTTTTAGCTCCGGGTCGGGTCACGTGACGGGAGTGACGTCTCCGAATGTTGTTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588703.5
CDS GCA 72 bp GGCCACTGCGTTGATGTTGGGCTTTTGCTGCAAGACTaGCTCATCCAAGGGCTGCAGCTCTACACTGAGCAG +
Preference number: 6 (lower is better)
Translates to: GHCVDVGLLLQD*LIQGLQLYTEQ
Trigger: CTGCTCAGTGTAGAGCTGCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586339.1
ENST00000586802.5
ENST00000682912.1
CDS GCA 72 bp AGGGTTTGGGAAGCACCCATGGTAGCAAGAGCAGAGTaGTGGGGCCAAAAGCCTTGGTCTGAAACCCAGTGC +
Preference number: 6 (lower is better)
Translates to: RVWEAPMVARAE*WGQKPWSETQC
Trigger: GCACTGGGTTTCAGACCAAGGCTTTTGGCCCCAGCACTCTGCTCTTGCTACCATGGGTGCTTCCCAAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS CAA 72 bp TCAGAGTGCACTGTCTGGATCTCATCTAGCGTGGCTTaGCGACCTCGGATCCGCTCGCACTTGCTAAGCAGG +
Preference number: 6 (lower is better)
Translates to: SECTVWISSSVA*RPRIRSHLLSR
Trigger: CCTGCTTAGCAAGTGCGAGCGGATCCGAGGTCGCAAAGCCACGCTAGATGAGATCCAGACAGTGCACTCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225983.10
ENST00000586802.5
ENST00000588419.1
ENST00000592385.5
ENST00000593013.5
ENST00000682912.1
CDS CAA 90 bp CACGCACTCTGGATCTCGATGACTTTCTCTAGCGTGGCCACTGCGTaGATGTTGGGCTTTTGCTGCAAGACTGCCTCATCCAAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: HALWISMTFSSVATA*MLGFCCKTASSKGC
Trigger: GCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGAGAAAGTCATCGAGATCCAGAGTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586339.1
CDS TCA 72 bp AGCCTTGGTCTGAAACCCAGTGCCGACATCCCCAGCTaGGTGGCCTTGGGTAAGTCACGCAACAACACCTTT +
Preference number: 6 (lower is better)
Translates to: SLGLKPSADIPS*VALGKSRNNTF
Trigger: AAAGGTGTTGTTGCGTGACTTACCCAAGGCCACTCAGCTGGGGATGTCGGCACTGGGTTTCAGACCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS GCA 72 bp TCTAGCGTGGCCACTGCGTTGATGTTGGGCTTTTGCTaGAAGACTGCCTCATCCAAGGGCTGCAGCTCTACA +
Preference number: 6 (lower is better)
Translates to: SSVATALMLGFC*KTASSKGCSST
Trigger: TGTAGAGCTGCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586339.1
ENST00000586802.5
ENST00000682912.1
CDS GCA 72 bp TTCTCTAGCGTGGCCACTGCGTTGATGTTGGGCTTTTaGTGCAAGACTGCCTCATCCAAGGGCTGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: FSSVATALMLGF*CKTASSKGCSS
Trigger: AGAGCTGCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586339.1
ENST00000586802.5
ENST00000682912.1
CDS CAA 90 bp CTCTGGATCTCGATGACTTTCTCTAGCGTGGCCACTGCGTTGATGTaGGGCTTTTGCTGCAAGACTGCCTCATCCAAGGGCTGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: LWISMTFSSVATALM*GFCCKTASSKGCSS
Trigger: AGAGCTGCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGAGAAAGTCATCGAGATCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586339.1
ENST00000586802.5
ENST00000682912.1
CDS CAA 72 bp TCGATGACTTTCTCTAGCGTGGCCACTGCGTTGATGTaGGGCTTTTGCTGCAAGACTGCCTCATCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: SMTFSSVATALM*GFCCKTASSKG
Trigger: GCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGAGAAAGTCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586339.1
ENST00000586802.5
ENST00000682912.1
CDS CAA 90 bp TGTTTGCTCTGGATCTCGATGACTTTCTCTAGCGTGGCCACTGCGTaGATGTTGGGCTTTTGCTGCAAGACTGCCTCATCCAAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: CLLWISMTFSSVATA*MLGFCCKTASSKGC
Trigger: GCAGCCCTTGGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGAGAAAGTCATCGAGATCCAGAGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000682912.1
CDS CCA 72 bp GTTCCTGGTATACAGTCTGCTCCTAATTGTAGGGGGTaGGAGGAAATATCGGCTACTAGCAATGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: VPGIQSAPNCRG*EEISATSNGGS
Trigger: GCTGCCGCCATTGCTAGTAGCCGATATTTCCTCCCACCCCCTACAATTAGGAGCAGACTGTATACCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS CCA 72 bp ATTGGGCTTCCAAGAGATTTTGTCCTTCCTGAGGCTTaGTCCTGGCTACTTCCCCAGCTCACAGAGAGTGGT +
Preference number: 6 (lower is better)
Translates to: IGLPRDFVLPEA*SWLLPQLTESG
Trigger: ACCACTCTCTGTGAGCTGGGGAAGTAGCCAGGACCAAGCCTCAGGAAGGACAAAATCTCTTGGAAGCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS CAA 72 bp TGGATCTCGATGACTTTCTCTAGCGTGGCCACTGCGTaGATGTTGGGCTTTTGCTGCAAGACTGCCTCATCC +
Preference number: 6 (lower is better)
Translates to: WISMTFSSVATA*MLGFCCKTASS
Trigger: GGATGAGGCAGTCTTGCAGCAAAAGCCCAACATCAACGCAGTGGCCACGCTAGAGAAAGTCATCGAGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586339.1
ENST00000586802.5
ENST00000682912.1
CDS CAA 90 bp ACATCCCCAGCTGAGTGGCCTTGGGTAAGTCACGCAACAACACCTTaGTTCACAGAAATGGACATCCTCGTTCTTACTACTCGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: TSPAEWPWVSHATTP*FTEMDILVLTTRGG
Trigger: GCCACCTCGAGTAGTAAGAACGAGGATGTCCATTTCTGTGAACAAAGGTGTTGTTGCGTGACTTACCCAAGGCCACTCAGCTGGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS GCA 72 bp GCGTCACTACCGTTCAAGGTAGGAAATCCCCTTCGTTaGTTGAAACTGCAACGTGAGGGCCAAGATGGAACA +
Preference number: 6 (lower is better)
Translates to: ASLPFKVGNPLR*LKLQREGQDGT
Trigger: TGTTCCATCTTGGCCCTCACGTTGCAGTTTCAAGCAACGAAGGGGATTTCCTACCTTGAACGGTAGTGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5
CDS GCA 72 bp ACAAGAGGAATTCCTGGAGCCTCAGCTTTACCTCAGTaGTGGCAATGGCACTCTCTTTGCTCTTCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: TRGIPGASALPQ*WQWHSLCSSPC
Trigger: ACAAGGAGAAGAGCAAAGAGAGTGCCATTGCCAGCACTGAGGTAAAGCTGAGGCTCCAGGAATTCCTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225983.10
ENST00000336057.9
ENST00000586802.5
ENST00000587776.1
ENST00000682912.1
CDS TCA 72 bp GCACGTAAGATTCTGAAGGAGGATCCAACATTTACATaGATTTTTAAGCCAGAATTGGGCTTCCAAGAGATT +
Preference number: 6 (lower is better)
Translates to: ARKILKEDPTFT*IFKPELGFQEI
Trigger: AATCTCTTGGAAGCCCAATTCTGGCTTAAAAATTCATGTAAATGTTGGATCCTCCTTCAGAATCTTACGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592385.5
ENST00000593013.5