RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HDAC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000068024

Ensembl transcript IDs: ENST00000345617.7, ENST00000430200.1, ENST00000445704.1, ENST00000446876.1, ENST00000454542.5, ENST00000460235.1, ENST00000461113.5, ENST00000463007.5, ENST00000487617.5, ENST00000493582.5, ENST00000494800.1, ENST00000495497.1, ENST00000496347.1, ENST00000535493.5, ENST00000543185.6, ENST00000553145.1

Found 1099 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCTGCAGCCCCTGGCCCCGGAGATGACGGCTGGTGCCCGTGCTTaGGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGC +
Preference number: 1 (lower is better)
Translates to: GLQPLAPEMTAGARA*GVRPARGASTARLG
Trigger: GCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGGGCTGCAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp AACACCTTGACAAAGTGGCCCTCCAGAACCAGAGCCCTGGGACGCTaGGGAGGGGCGGCCAGTCCCAGCGGGCCACGGCCTCCGGGACAG +
Preference number: 1 (lower is better)
Translates to: NTLTKWPSRTRALGR*GGAASPSGPRPPGQ
Trigger: CTGTCCCGGAGGCCGTGGCCCGCTGGGACTGGCCGCCCCTCCCCAGCGTCCCAGGGCTCTGGTTCTGGAGGGCCACTTTGTCAAGGTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp GATGACGGCTGGTGCCCGTGCTTGAGGCGTCAGGCCAGCTCGCGGTaGCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTCCCACC +
Preference number: 1 (lower is better)
Translates to: DDGWCPCLRRQASSR*QHCQARLATGNCPT
Trigger: GGTGGGACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp GGGCGGCAGAAAGGCTTCCCGTGGCTGTTGCACGCTGGGTGTCCCTaGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACG +
Preference number: 1 (lower is better)
Translates to: GRQKGFPWLLHAGCP*VLQESPTVGRRRDT
Trigger: CGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp CTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTGCACGCTaGGTGTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAG +
Preference number: 1 (lower is better)
Translates to: LWAWAAERLPVAVAR*VSLGAPREPHGGTQ
Trigger: CTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp GCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCCTaGGCGGCAGAAAGGCTTCCCGTGGCTGTTGCACGCTGGGTGTCC +
Preference number: 1 (lower is better)
Translates to: AATPRRACASRDLWA*AAERLPVAVARWVS
Trigger: GGACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp TGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTaGGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTG +
Preference number: 1 (lower is better)
Translates to: CPCVCASPASVPCSL*GCHAQACMCVSRPV
Trigger: CACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp TCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTaGACGCTGGGTGTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGG +
Preference number: 1 (lower is better)
Translates to: SRPVGLGGRKASRGC*TLGVPGCSKRAPRW
Trigger: CCACCGTGGGGCTCTCTTGGAGCACCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp AGGCTCCTTTCTTCCACGGCGTCCCTTGCGGGACCCGCCAGAGTGTaGTTGGCTTCCGCGTGTCCGTGTGTCTGCGCGTCGCCGGCGTCT +
Preference number: 1 (lower is better)
Translates to: RLLSSTASLAGPARV*LASACPCVCASPAS
Trigger: AGACGCCGGCGACGCGCAGACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAGAAAGGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp TGGTGCCCGTGCTTGAGGCGTCAGGCCAGCTCGCGGTGCCAGCACTaGCAGGCTCGGCTGGCCACAGGAAACTGTCCCACCGATTCCTGC +
Preference number: 1 (lower is better)
Translates to: WCPCLRRQASSRCQH*QARLATGNCPTDSC
Trigger: GCAGGAATCGGTGGGACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp GTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTaGCTGTTGCACGCTGGGTGTCCCTGGGTGCTCCAAGAGAGCCCC +
Preference number: 1 (lower is better)
Translates to: VRLETCGPGRQKGFP*LLHAGCPWVLQESP
Trigger: GGGGCTCTCTTGGAGCACCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp TGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTaGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTGCACGCTGG +
Preference number: 1 (lower is better)
Translates to: CEAATPRRACASRDL*AWAAERLPVAVARW
Trigger: CCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp TCCTTTCTTCCACGGCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTaGCTTCCGCGTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCC +
Preference number: 1 (lower is better)
Translates to: SFLPRRPLRDPPECA*LPRVRVSARRRRLS
Trigger: GGACAGACGCCGGCGACGCGCAGACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAGAAAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp CTCGGCCGCCTGTTGCCACAGGCTCCTTTCTTCCACGGCGTCCCTTaGGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGT +
Preference number: 1 (lower is better)
Translates to: LGRLLPQAPFFHGVP*GTRQSVLGFRVSVC
Trigger: ACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAGAAAGGAGCCTGTGGCAACAGGCGGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp CCCTCCCTGACGTGGTCCCGCCTGCAGACGCCGAGGCAGATCCTCTaGCATCTGCCCTGGACGCTTGCTGTGGAGAAGAGCCGAGTGTGT +
Preference number: 1 (lower is better)
Translates to: PSLTWSRLQTPRQIL*HLPWTLAVEKSRVC
Trigger: ACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGACCACGTCAGGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp TTTCTGTGCCTCGTGTCAACTGAATTCGGCAGCTCGGCCGCCTGTTaGCACAGGCTCCTTTCTTCCACGGCGTCCCTTGCGGGACCCGCC +
Preference number: 1 (lower is better)
Translates to: FLCLVSTEFGSSAAC*HRLLSSTASLAGPA
Trigger: GGCGGGTCCCGCAAGGGACGCCGTGGAAGAAAGGAGCCTGTGGCAACAGGCGGCCGAGCTGCCGAATTCAGTTGACACGAGGCACAGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp ACCCTCCCTGCAGGTTCACCAGGCAACAAGGGTCCCTGGGTTCCTTaGAGCCACAGGCTCCAAAATCCAGGGCTGGCCACGTGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: TLPAGSPGNKGPWVP*SHRLQNPGLATWLQ
Trigger: CTGCAGCCACGTGGCCAGCCCTGGATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACCCTTGTTGCCTGGTGAACCTGCAGGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp TCCAAGGACCCACAGGGAGAACACATGAAGGAACCCTCCCTGACGTaGTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCC +
Preference number: 1 (lower is better)
Translates to: SKDPQGEHMKEPSLT*SRLQTPRQILCHLP
Trigger: GGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGACCACGTCAGGGAGGGTTCCTTCATGTGTTCTCCCTGTGGGTCCTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp CACGGCGGGAAGCCGCGAGGGCAGGGCAGACGCCAAGAGGCCCAGTaGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTGCTCGCTT +
Preference number: 1 (lower is better)
Translates to: HGGKPRGQGRRQEAQ*RHQGFPQRDIKCSL
Trigger: AAGCGAGCACTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCTGCCCTGCCCTCGCGGCTTCCCGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp CGAGTCCGCCCAGTTCTCAATCAGAATAAACCGTCACAAGGCCAGTaGGGGCGGGCGGCGCTCGCCTGGCCCGTGGAAGGAGATAAAAGG +
Preference number: 1 (lower is better)
Translates to: RVRPVLNQNKPSQGQ*GRAALAWPVEGDKR
Trigger: CCTTTTATCTCCTTCCACGGGCCAGGCGAGCGCCGCCCGCCCTCACTGGCCTTGTGACGGTTTATTCTGATTGAGAACTGGGCGGACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp TGTTGCACGCTGGGTGTCCCTGGGTGCTCCAAGAGAGCCCCACGGTaGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAA +
Preference number: 1 (lower is better)
Translates to: CCTLGVPGCSKRAPR*DAGVTRESFLAELQ
Trigger: TTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGACACCCAGCGTGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp GGCAATCATACCCTCCCTGCAGGTTCACCAGGCAACAAGGGTCCCTaGGTTCCTTGCAGCCACAGGCTCCAAAATCCAGGGCTGGCCACG +
Preference number: 1 (lower is better)
Translates to: GNHTLPAGSPGNKGP*VPCSHRLQNPGLAT
Trigger: CGTGGCCAGCCCTGGATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACCCTTGTTGCCTGGTGAACCTGCAGGGAGGGTATGATTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp GTGTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTaGCACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACAGAC +
Preference number: 1 (lower is better)
Translates to: VSLGAPREPHGGTQA*HGKVSWLSFKTETD
Trigger: GTCTGTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp AGGGTCCCTGGGTTCCTTGCAGCCACAGGCTCCAAAATCCAGGGCTaGCCACGTGGCTGCAGTGGAAAAACCCAAGTGGGTAAAGAGCCC +
Preference number: 1 (lower is better)
Translates to: RVPGFLAATGSKIQG*PRGCSGKTQVGKEP
Trigger: GGGCTCTTTACCCACTTGGGTTTTTCCACTGCAGCCACGTGGCCAGCCCTGGATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp GGGCACGTCCAGACAATCCAAGAGAAACGGATTAAATTACAGAGGTaGATGGTGGCCACGGCCAGTGCGCAGCTCACGGCGGGCGCGAAC +
Preference number: 1 (lower is better)
Translates to: GHVQTIQEKRIKLQR*MVATASAQLTAGAN
Trigger: GTTCGCGCCCGCCGTGAGCTGCGCACTGGCCGTGGCCACCATTCACCTCTGTAATTTAATCCGTTTCTCTTGGATTGTCTGGACGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp CCTGCTAGCTGGGCCCTGCCACTGCTCTGTGCCATGAATGGGGAATaGACCAGCTCCTCTTGCCAATCTGGGCTTCAGAGCAAAGAGTGG +
Preference number: 1 (lower is better)
Translates to: PASWALPLLCAMNGE*TSSSCQSGLQSKEW
Trigger: CCACTCTTTGCTCTGAAGCCCAGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGGGCCCAGCTAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp TGGTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTaGACGCTTGCTGTGGAGAAGAGCCGAGTGTGTCTTCAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: WSRLQTPRQILCHLP*TLAVEKSRVCLQRK
Trigger: TTTTCTTTGAAGACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp CCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTaGTGTGGAGAAGAGCCGAGTGTGTCTTCAAAGAAAAGGCTACAC +
Preference number: 1 (lower is better)
Translates to: PADAEADPLPSALDA*CGEEPSVSSKKRLH
Trigger: GTGTAGCCTTTTCTTTGAAGACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp GAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTaGTCGCTTGCTGACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAA +
Preference number: 1 (lower is better)
Translates to: EAQWRHQGFPQRDIK*SLADSQPVPPRPLQ
Trigger: TTGCAAAGGCCTTGGGGGCACTGGCTGGGAGTCAGCAAGCGAGCACTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp ACGTCCAGACAATCCAAGAGAAACGGATTAAATTACAGAGGTGAATaGTGGCCACGGCCAGTGCGCAGCTCACGGCGGGCGCGAACAGGC +
Preference number: 1 (lower is better)
Translates to: TSRQSKRNGLNYRGE*WPRPVRSSRRARTG
Trigger: GCCTGTTCGCGCCCGCCGTGAGCTGCGCACTGGCCGTGGCCACCATTCACCTCTGTAATTTAATCCGTTTCTCTTGGATTGTCTGGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp TCCAGACAATCCAAGAGAAACGGATTAAATTACAGAGGTGAATGGTaGCCACGGCCAGTGCGCAGCTCACGGCGGGCGCGAACAGGCATC +
Preference number: 1 (lower is better)
Translates to: SRQSKRNGLNYRGEW*PRPVRSSRRARTGI
Trigger: GATGCCTGTTCGCGCCCGCCGTGAGCTGCGCACTGGCCGTGGCCACCATTCACCTCTGTAATTTAATCCGTTTCTCTTGGATTGTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp GAATGGACCAGCTCCTCTTGCCAATCTGGGCTTCAGAGCAAAGAGTaGCCACCAGGGAGGGGAAAGTCAAACAAGTCCCAAGACCGTTCT +
Preference number: 1 (lower is better)
Translates to: EWTSSSCQSGLQSKE*PPGRGKSNKSQDRS
Trigger: AGAACGGTCTTGGGACTTGTTTGACTTTCCCCTCCCTGGTGGCCACTCTTTGCTCTGAAGCCCAGATTGGCAAGAGGAGCTGGTCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp TGGAGTGAGCTGACAGATGAAACGTGCCTCCCCCTGCCAGGCCTTTaGAGAGGGCGTCTCCATTTGAATGAGATTAGAATTAAGTCCCCC +
Preference number: 1 (lower is better)
Translates to: WSELTDETCLPLPGL*RGRLHLNEIRIKSP
Trigger: GGGGGACTTAATTCTAATCTCATTCAAATGGAGACGCCCTCTGCAAAGGCCTGGCAGGGGGAGGCACGTTTCATCTGTCAGCTCACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp GGGTCCCTCCTGAGCACGGTGTGTCTGAACTTCTGCCCCCAAGTCTaGACCCAATATACACTTTGGAATGAAACTGGTGGCTTCATGTGC +
Preference number: 1 (lower is better)
Translates to: GSLLSTVCLNFCPQV*TQYTLWNETGGFMC
Trigger: GCACATGAAGCCACCAGTTTCATTCCAAAGTGTATATTGGGTTCAGACTTGGGGGCAGAAGTTCAGACACACCGTGCTCAGGAGGGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp GCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTGCTCGCTTGCTaGCTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: ASSGFPSKGYKVLAC*LPASAPKAFAKEEK
Trigger: TTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGTCAGCAAGCGAGCACTTTATATCCCTTTGAGGGAAACCCTGATGACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp TGTCTTCAAAGAAAAGGCTACACAGTAATGCTCTCAGCACATTTGTaGAGCTGGAGTGAGCTGACAGATGAAACGTGCCTCCCCCTGCCA +
Preference number: 1 (lower is better)
Translates to: CLQRKGYTVMLSAHL*SWSELTDETCLPLP
Trigger: TGGCAGGGGGAGGCACGTTTCATCTGTCAGCTCACTCCAGCTTCACAAATGTGCTGAGAGCATTACTGTGTAGCCTTTTCTTTGAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 90 bp CTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTaGTGTCACTCCGAAAAGACCTACGGTCCCTCCTCTCACTTTCTG +
Preference number: 1 (lower is better)
Translates to: LLYTAPRTDQERHNR*CHSEKTYGPSSHFL
Trigger: CAGAAAGTGAGAGGAGGGACCGTAGGTCTTTTCGGAGTGACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp GCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTaGCGTGTGAGAACACTTTGGATTCGTTTAAAATTTGTTGGACTT +
Preference number: 1 (lower is better)
Translates to: AYHMLHDQMEMLNRM*RVRTLWIRLKFVGL
Trigger: AAGTCCAACAAATTTTAAACGAATCCAAAGTGTTCTCACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp AGTGGCGAATGTGTTGGCGATCTGAAATCTAGCCAATCTGGAGCTTaGGAAAACATGAATTTCAATCAATCAGGATCCCTTTCCATAAGC +
Preference number: 1 (lower is better)
Translates to: SGECVGDLKSSQSGA*ENMNFNQSGSLSIS
Trigger: GCTTATGGAAAGGGATCCTGATTGATTGAAATTCATGTTTTCTCAAGCTCCAGATTGGCTAGATTTCAGATCGCCAACACATTCGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 90 bp TACTTGCTTTTAATAAAAAGCATTCCGATCGTAACACTGCAAGTGTaGCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTAT +
Preference number: 1 (lower is better)
Translates to: YLLLIKSIPIVTLQV*LPHASRPDGDAQSY
Trigger: ATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGGAATGCTTTTTATTAAAAGCAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp TCTGAACTTCTGCCCCCAAGTCTGAACCCAATATACACTTTGGAATaGAACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAA +
Preference number: 1 (lower is better)
Translates to: SELLPPSLNPIYTLE*NWWLHVLENKLPVK
Trigger: TTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTTTCATTCCAAAGTGTATATTGGGTTCAGACTTGGGGGCAGAAGTTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 90 bp AGACAAAGTGAGGCCGAGCTAAGAACACGCTCAGCTTCGTTACAATaGAGAAATGGTTTCCTTTCGATGCAAAGTATAATTGTAAACCAC +
Preference number: 1 (lower is better)
Translates to: RQSEAELRTRSASLQ*RNGFLSMQSIIVNH
Trigger: GTGGTTTACAATTATACTTTGCATCGAAAGGAAACCATTTCTTCATTGTAACGAAGCTGAGCGTGTTCTTAGCTCGGCCTCACTTTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp CGGGCTGCAGCCCCTGGCCCCGGAGATGACGGCTGGTGCCCGTGCTaGAGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: RAAAPGPGDDGWCPC*RRQASSRCQHCQAR
Trigger: CCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGGGCTGCAGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCTGGGTGTCCCTGGGTaGTCCAAGAGAGCCCCACGG +
Preference number: 2 (lower is better)
Translates to: SARRRRLSRVPCEAATPRLGVPG*SKRAPR
Trigger: CCGTGGGGCTCTCTTGGAGCACCCAGGGACACCCAG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTGCGTGTCCGTGTGTCTaGGCGTCGCCGGCGTCTGTC +
Preference number: 2 (lower is better)
Translates to: QASSRCQHCQARLATGNCACPCV*ASPASV
Trigger: GACAGACGCCGGCGACGCGCAGACACACGGACACGC...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp CTCCTTTCTTCCACGGCGTCCCTTGCGGGACCCGCCAGAGTGTGCTaGGCTTCCGCGTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTC +
Preference number: 2 (lower is better)
Translates to: LLSSTASLAGPARVC*ASACPCVCASPASV
Trigger: GACAGACGCCGGCGACGCGCAGACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAGAAAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp GCTCGGCCGCCTGTTGCCACAGGCTCCTTTCTTCCACGGCGTCCCTaGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTG +
Preference number: 2 (lower is better)
Translates to: ARPPVATGSFLPRRP*RDPPECAWLPRVRV
Trigger: CACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAGAAAGGAGCCTGTGGCAACAGGCGGCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCCGTCACAAGGCCAGTaGGGGCGGGCGGCGCTCGCC +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYPSQGQ*GRAALA
Trigger: GGCGAGCGCCGCCCGCCCTCACTGGCCTTGTGACGG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGCTTCCCGTGGCTGTTaGACGCTGGGTGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: ASLAGPARVCLASACPCVASRGC*TLGVPG
Trigger: CCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGGACCCGCCAGAGTGTaGTTGGCTTCCGCGTGTCCG +
Preference number: 2 (lower is better)
Translates to: VPPADAEADPLPSALDACGPARV*LASACP
Trigger: CGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTAAGAGAGCCCCACGGTaGGACGCAGGCGTGACACGG +
Preference number: 2 (lower is better)
Translates to: QASSRCQHCQARLATGNCKRAPR*DAGVTR
Trigger: CCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTT...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGTGGCTGTTGCACGCTaGGTGTCCCTGGGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ASLAGPARVCLASACPCVVAVAR*VSLGAP
Trigger: TGGAGCACCCAGGGACACCCAGCGTGCAACAGCCAC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTGGTGGGACGCAGGCGTaGCACGGGAAAGTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: QASSRCQHCQARLATGNCGGTQA*HGKVSW
Trigger: CCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACC...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCAACCCTCCCTGCCCTTaGCACGGAGGGGAAAAACAC +
Preference number: 2 (lower is better)
Translates to: VPPADAEADPLPSALDACNPPCP*HGGEKH
Trigger: GTGTTTTTCCCCTCCGTGGCAAGGGCAGGGAGGGTT...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCTGGGTGTCCCTGGGTaGTCCAAGAGAGCCCCACGG +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYLGVPG*SKRAPR
Trigger: CCGTGGGGCTCTCTTGGAGCACCCAGGGACACCCAG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCCCCCACTGATAACCTaGCCACTGAGCAGTCCATGT +
Preference number: 2 (lower is better)
Translates to: VPPADAEADPLPSALDACPPLIT*PLSSPC
Trigger: ACATGGACTGCTCAGTGGCCAGGTTATCAGTGGGGG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp TACCCTCCCTGCAGGTTCACCAGGCAACAAGGGTCCCTGGGTTCCTaGCAGCCACAGGCTCCAAAATCCAGGGCTGGCCACGTGGCTGCA +
Preference number: 2 (lower is better)
Translates to: YPPCRFTRQQGSLGS*QPQAPKSRAGHVAA
Trigger: TGCAGCCACGTGGCCAGCCCTGGATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACCCTTGTTGCCTGGTGAACCTGCAGGGAGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACTGCCACGCCCAGGCGTaGATGTGCGTCTCGAGACCT +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYCHAQA*MCVSRP
Trigger: AGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCA...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCGACGGCTGGTGCCCGTaGTTGAGGCGTCAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: PATALCHEWGMDQLLLPIDGWCP*LRRQAS
Trigger: GCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTC...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGCTGGTGCCCGTGCTTaGGGCGTCAGGCCAGCTCGC +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRAGARA*GVRPAR
Trigger: GCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCGCCAAGAGGCCCAGTaGCGTCATCAGGGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYRQEAQ*RHQGFP
Trigger: AGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGGAAAGTTTCTTGGCTaGGCTTCAAGACAGAGACAG +
Preference number: 2 (lower is better)
Translates to: VPPADAEADPLPSALDACGKFLG*ASRQRQ
Trigger: CTGTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCTGCCCCATGCATTGCTaGCATGCTCAAAAGGTCTTT +
Preference number: 2 (lower is better)
Translates to: VPPADAEADPLPSALDACCPMHC*HAQKVF
Trigger: AAAGACCTTTTGAGCATGTCAGCAATGCATGGGGCA...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGCCACGCCCAGGCGTaGATGTGCGTCTCGAGACCT +
Preference number: 2 (lower is better)
Translates to: PATALCHEWGMDQLLLPICHAQA*MCVSRP
Trigger: AGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCA...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATCAGGCCAGCTCGCGGTaGCAGCACTGCCAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDQASSR*QHCQAR
Trigger: CCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCACGGGAAAGTTTCTTaGCTGAGCTTCAAGACAGAG +
Preference number: 2 (lower is better)
Translates to: VPPADAEADPLPSALDACHGKVS*LSFKTE
Trigger: CTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTTCCACGGCGTCCCTTaGGGGACCCGCCAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKFHGVP*GTRQSV
Trigger: CACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAA...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATCGCGGTGCCAGCACTaGCAGGCTCGGCTGGCCACA +
Preference number: 2 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTSRCQH*QARLAT
Trigger: TGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGTGGCTGTTGCACGCTaGGTGTCCCTGGGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSVAVAR*VSLGAP
Trigger: TGGAGCACCCAGGGACACCCAGCGTGCAACAGCCAC...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCGAGACCTGTGGGCCTaGGCGGCAGAAAGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRRDLWA*AAERLP
Trigger: GGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCCCAGGGCTGGCCACGTaGCTGCAGTGGAAAAACCCA +
Preference number: 2 (lower is better)
Translates to: PATALCHEWGMDQLLLPIPGLAT*LQWKNP
Trigger: TGGGTTTTTCCACTGCAGCCACGTGGCCAGCCCTGG...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp GCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTaGCTGTGGAGAAGAGCCGAGTGTGTCTTCAAAGAAAAGGCTACA +
Preference number: 2 (lower is better)
Translates to: ACRRRGRSSAICPGR*LWRRAECVFKEKAT
Trigger: TGTAGCCTTTTCTTTGAAGACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGTGCCTCGTGTCAACTaGATTCGGCAGCTCGGCCGC +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRVPRVN*IRQLGR
Trigger: GCGGCCGAGCTGCCGAATTCAGTTGACACGAGGCAC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCCGCCAGAGTGTGCTTaGCTTCCGCGTGTCCGTGTG +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRPPECA*LPRVRV
Trigger: CACACGGACACGCGGAAGCCAAGCACACTCTGGCGG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTTCCGAAACTCGGCTCTaGGTCCCTCCTGAGCACGGT +
Preference number: 2 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSSETRL*VPPEHG
Trigger: ACCGTGCTCAGGAGGGACCCAGAGCCGAGTTTCGGA...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACTCTTCCGATGGCTTTTaGGAAACTCAAGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYSSDGF*ETQASS
Trigger: GGAGCTGGCTTGAGTTTCTCAAAAGCCATCGGAAGA...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGTTACCAGTAAAACGTaGCTGTCAGTTACTGTTGAA +
Preference number: 2 (lower is better)
Translates to: VPPADAEADPLPSALDACVTSKT*LSVTVE
Trigger: TTCAACAGTAACTGACAGTCACGTTTTACTGGTAAC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTTTCCACGGCGTCCCTTaGGGGACCCGCCAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCFHGVP*GTRQSV
Trigger: CACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAA...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCCCCTGCCAGGCCTTTaGAGAGGGCGTCTCCATTTG +
Preference number: 2 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVPLPGL*RGRLHL
Trigger: CAAATGGAGACGCCCTCTGCAAAGGCCTGGCAGGGG...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGGCAACAAGGGTCCCTaGGTTCCTTGCAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRGNKGP*VPCSHR
Trigger: CCTGTGGCTGCAAGGAACCCAGGGACCCTTGTTGCC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGAAGAGCCTGCTAGCTaGGCCCTGCCACTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVEEPAS*ALPLLC
Trigger: ACAGAGCAGTGGCAGGGCCCAGCTAGCAGGCTCTTC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGGACCCGCCAGAGTGTaGTTGGCTTCCGCGTGTCCG +
Preference number: 2 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCGPARV*LASACP
Trigger: CGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCAGGCCAGCTCGCGGTaGCAGCACTGCCAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEQASSR*QHCQAR
Trigger: CCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGGCTGGCCACGTGGCTaGAGTGGAAAAACCCAAGTG +
Preference number: 2 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVGWPRG*SGKTQV
Trigger: CACTTGGGTTTTTCCACTGCAGCCACGTGGCCAGCC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACAAGTCAACACAGCTGTaGGGAAAAGGGGACTCTTTC +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYKSTQL*GKGDSF
Trigger: GAAAGAGTCCCCTTTTCCGCACAGCTGTGTTGACTT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCAGGGTAGTTGCCCAGTaGCGAATGTGTTGGCGATCT +
Preference number: 2 (lower is better)
Translates to: PATALCHEWGMDQLLLPIRVVAQ*RMCWRS
Trigger: AGATCGCCAACACATTCGCCACTGGGCAACTACCCT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGGCTGGTGCCCGTGCTTaGGGCGTCAGGCCAGCTCGC +
Preference number: 2 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQAGARA*GVRPAR
Trigger: GCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGC...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGCCCTGGCCCCGGAGATaGCGGCTGGTGCCCGTGCTT +
Preference number: 2 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQPWPRR*RLVPVL
Trigger: AAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGG...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTAGGTACATATGTGCATaGAGGCTTGGAGACGGGAGC +
Preference number: 2 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSRYICA*RLGDGS
Trigger: GCTCCCGTCTCCAAGCCTTCATGCACATATGTACCT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCAGCCCAGTGACCAAGTaGATCCAAGAATCTGCACTC +
Preference number: 2 (lower is better)
Translates to: PATALCHEWGMDQLLLPISPVTK*IQESAL
Trigger: GAGTGCAGATTCTTGGATTCACTTGGTCACTGGGCT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCCTGCCACTGCTCTGTaGCATGAATGGGGAATGGAC +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRPATAL*HEWGMD
Trigger: GTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACTGCTTCACGACCAGATaGAGATGCTCAATCGTATGT +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYCFTTR*RCSIVC
Trigger: ACATACGATTGAGCATCTCCATCTGGTCGTGAAGCA...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACGAAAGACACAATCGTTaGTGTCACTCCGAAAAGACC +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYERHNR*CHSEKT
Trigger: GGTCTTTTCGGAGTGACACCAACGATTGTGTCTTTC...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATCCAAAATCCAGGGCTaGCCACGTGGCTGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTSKIQG*PRGCSG
Trigger: TCCACTGCAGCCACGTGGCCAGCCCTGGATTTTGGA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGAGGTACATATGTGCATaGAGGCTTGGAGACGGGAGC +
Preference number: 2 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKRYICA*RLGDGS
Trigger: GCTCCCGTCTCCAAGCCTTCATGCACATATGTACCT...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGCCCAGGCGTGCATGTaGGTCTCGAGACCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEAQACM*VSRPVG
Trigger: GCCCACAGGTCTCGAGACGCACATGCACGCCTGGGC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGTCGCGGTGCCAGCACTaGCAGGCTCGGCTGGCCACA +
Preference number: 2 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKSRCQH*QARLAT
Trigger: TGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGA...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGCCCACGTGTGCCCCATaGATTGCTGACATGCTCAAA +
Preference number: 2 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKPTCAP*IADMLK
Trigger: TTTGAGCATGTCAGCAATGCATGGGGCACACGTGGG...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAGGTCCCTGGGTTCCTTaGAGCCACAGGCTCCAAAAT +
Preference number: 2 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTGPWVP*SHRLQN
Trigger: ATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACC...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTCAATCATACCCTCCCTaGAGGTTCACCAGGCAACAA +
Preference number: 2 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSQSYPP*RFTRQQ
Trigger: TTGTTGCCTGGTGAACCTGCAGGGAGGGTATGATTG...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGCGTCTCGAGACCTGTaGGCCTGGGCGGCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEASRDL*AWAAER
Trigger: CCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTAAAGACTGGCTGTCCTaGTCAGGCAATCATACCCTC +
Preference number: 2 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSKDWLS*SGNHTL
Trigger: GAGGGTATGATTGCCTGACCAGGACAGCCAGTCTTT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAGGTGGGACGCAGGCGTaGCACGGGAAAGTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLGGTQA*HGKVSW
Trigger: CCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACC...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCATGCTCAATCGTATGTaGCGTGTGAGAACACTTTGG +
Preference number: 2 (lower is better)
Translates to: PATALCHEWGMDQLLLPIMLNRM*RVRTLW
Trigger: CCAAAGTGTTCTCACACGTCACATACGATTGAGCAT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACGAGGGCGTCTCCATTTaGATGAGATTAGAATTAAGT +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYEGVSI*MRLELS
Trigger: ACTTAATTCTAATCTCATTCAAATGGAGACGCCCTC...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTGCTTCCCGTGGCTGTTaGACGCTGGGTGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSASRGC*TLGVPG
Trigger: CCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGC...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACACCCACGTGTGCCCCATaGATTGCTGACATGCTCAAA +
Preference number: 2 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTPTCAP*IADMLK
Trigger: TTTGAGCATGTCAGCAATGCATGGGGCACACGTGGG...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGCGCCGCACACCGCTATaGTTCACAGAGGCGGGCCAC +
Preference number: 2 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQRRTPL*FTEAGH
Trigger: GTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGTGGAAAAACCCAAGTaGGTAAAGAGCCCCACGTGT +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRVEKPK*VKSPTC
Trigger: ACACGTGGGGCTCTTTACCCACTTGGGTTTTTCCAC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCTCCTCTTGCCAATCTaGGCTTCAGAGCAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVLLLPI*ASEQRV
Trigger: CACTCTTTGCTCTGAAGCCCAGATTGGCAAGAGGAG...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCGGGCGGCGCTCGCCTaGCCCGTGGAAGGAGATAAA +
Preference number: 2 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKRAALA*PVEGDK
Trigger: TTTATCTCCTTCCACGGGCCAGGCGAGCGCCGCCCG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTATGCTCAATCGTATGTaGCGTGTGAGAACACTTTGG +
Preference number: 2 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSMLNRM*RVRTLW
Trigger: CCAAAGTGTTCTCACACGTCACATACGATTGAGCAT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACGACCAGATGGAGATaGTCAATCGTATGTGACGTG +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRTTRWR*SIVCDV
Trigger: CACGTCACATACGATTGAGCATCTCCATCTGGTCGT...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGACGACCAGATGGAGATaGTCAATCGTATGTGACGTG +
Preference number: 2 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKTTRWR*SIVCDV
Trigger: CACGTCACATACGATTGAGCATCTCCATCTGGTCGT...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACACACAAGCCATCCATTTaGAGGGACCTTCGCAATCTG +
Preference number: 2 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTHKPSI*RDLRNL
Trigger: CAGATTGCGAAGGTCCCTGCAAATGGATGGCTTGTG...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACAACAATTCTGTACGCTaGAGAAAACTCATCGTACAA +
Preference number: 2 (lower is better)
Translates to: CAAHGGREQASGRLQCRYNNSVR*RKLIVQ
Trigger: TTGTACGATGAGTTTTCTGCAGCGTACAGAATTGTT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAAGATCCTCTGCCATCTaGCCTGGACGCTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLRSSAI*PGRLLW
Trigger: CCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCT...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACAGAAAGGCTTCCCGTaGCTGTTGCACGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLQKGFP*LLHAGC
Trigger: ACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCATATACACTTTGGAATaGAACTGGTGGCTTCATGTG +
Preference number: 2 (lower is better)
Translates to: PATALCHEWGMDQLLLPIIYTLE*NWWLHV
Trigger: CACATGAAGCCACCAGTTTCATTCCAAAGTGTATAT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACCTGCCACTGCTCTGTaGCATGAATGGGGAATGGAC +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLPATAL*HEWGMD
Trigger: GTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCAGAAAGGCTTCCCGTaGCTGTTGCACGCTGGGTGT +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEQKGFP*LLHAGC
Trigger: ACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGACTGCCCCCGGCATCTaGCAAGCCTCCCAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQTAPGI*QASQGG
Trigger: GCCACCCTGGGAGGCTTGCCAGATGCCGGGGGCAGT...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTCCGAAACTCGGCTCTaGGTCCCTCCTGAGCACGGT +
Preference number: 2 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSSETRL*VPPEHG
Trigger: ACCGTGCTCAGGAGGGACCCAGAGCCGAGTTTCGGA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTATTCATTAATGCTGACTaGCCCCGGCATCTGGCAAGC +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLFINAD*PRHLAS
Trigger: GCTTGCCAGATGCCGGGGGCAGTCAGCATTAATGAA...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCACTGGTGGCTTCATGTaGTGGAAAATAAGTTACCAG +
Preference number: 2 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVTGGFM*WKISYQ
Trigger: CTGGTAACTTATTTTCCAGCACATGAAGCCACCAGT...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGAAAAAGAGTAAAGACTaGCTGTCCTGGTCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRKKSKD*LSWSGN
Trigger: ATTGCCTGACCAGGACAGCCAGTCTTTACTCTTTTT...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAATCGTATGTGACGTGTaGGAACACTTTGGATTCGTT +
Preference number: 2 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTIVCDV*EHFGFV
Trigger: AACGAATCCAAAGTGTTCTCACACGTCACATACGAT...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACTCTCAGCACATTTGTaGAGCTGGAGTGAGCTGACA +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLLSAHL*SWSELT
Trigger: TGTCAGCTCACTCCAGCTTCACAAATGTGCTGAGAG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTAACAATTCTGTACGCTaGAGAAAACTCATCGTACAA +
Preference number: 2 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSNNSVR*RKLIVQ
Trigger: TTGTACGATGAGTTTTCTGCAGCGTACAGAATTGTT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGTGAATCCAAGAATCTaGACTCATTTGGTCAAAAGT +
Preference number: 2 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSVNPRI*THLVKS
Trigger: ACTTTTGACCAAATGAGTGCAGATTCTTGGATTCAC...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGAGACTGTGGAGTTGTaGGTAATAAACTTTAAGCAC +
Preference number: 2 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKETVEL*VINFKH
Trigger: GTGCTTAAAGTTTATTACCCACAACTCCACAGTCTC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGATGTGCATGAAGGCTTaGAGACGGGAGCGGTTCTGT +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEMCMKA*RRERFC
Trigger: ACAGAACCGCTCCCGTCTCCAAGCCTTCATGCACAT...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGAACACCTTGACAAAGTaGCCCTCCAGAACCAGAGCC +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGENTLTK*PSRTRA
Trigger: GGCTCTGGTTCTGGAGGGCCACTTTGTCAAGGTGTT...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTATTCTGCCCCCAAGTCTaGACCCAATATACACTTTGG +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLFCPQV*TQYTLW
Trigger: CCAAAGTGTATATTGGGTTCAGACTTGGGGGCAGAA...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGATATTTGTTTTCTGTaGCTCGTGTCAACTGAATTC +
Preference number: 2 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRDICFL*LVSTEF
Trigger: GAATTCAGTTGACACGAGGCACAGAAAACAAATATC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTTCATTAATGCTGACTaGCCCCGGCATCTGGCAAGC +
Preference number: 2 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSFINAD*PRHLAS
Trigger: GCTTGCCAGATGCCGGGGGCAGTCAGCATTAATGAA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCCCCTGCCAGGCCTTTaGAGAGGGCGTCTCCATTTG +
Preference number: 2 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQPLPGL*RGRLHL
Trigger: CAAATGGAGACGCCCTCTGCAAAGGCCTGGCAGGGG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACACGGGAAAGTTTCTTaGCTGAGCTTCAAGACAGAG +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLHGKVS*LSFKTE
Trigger: CTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGACTGCCAGGCTCGGCTaGCCACAGGAAACTGTCCCA +
Preference number: 2 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQTARLG*PQETVP
Trigger: TGGGACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGT...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTTCTGCCCCCAAGTCTaGACCCAATATACACTTTGG +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEFCPQV*TQYTLW
Trigger: CCAAAGTGTATATTGGGTTCAGACTTGGGGGCAGAA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGTAACACTGCAAGTGTaGCTACCACATGCTTCACGA +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEVTLQV*LPHASR
Trigger: TCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTAC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGGTGGAAAAACCCAAGTaGGTAAAGAGCCCCACGTGT +
Preference number: 2 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKVEKPK*VKSPTC
Trigger: ACACGTGGGGCTCTTTACCCACTTGGGTTTTTCCAC...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACAGACCATTACGAAATaGTCCTTCCCCTTGCAAACA +
Preference number: 2 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLQTITK*SFPLQT
Trigger: TGTTTGCAAGGGGAAGGACCATTTCGTAATGGTCTG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp ACTCCAGTGAAGTGGAAAGAAGGTGACCGTCAGAAGAGGATATCATaGGTCGGTGAAAATCCACCCACACAAAACAAGACAAGAATGAGA +
Preference number: 2 (lower is better)
Translates to: TPVKWKEGDRQKRIS*VGENPPTQNKTRMR
Trigger: TCTCATTCTTGTCTTGTTTTGTGTGGGTGGATTTTCACCGACCAATGATATCCTCTTCTGACGGTCACCTTCTTTCCACTTCACTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGGGAAAGTTTCTTGGCTaGGCTTCAAGACAGAGACAG +
Preference number: 2 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQGKFLG*ASRQRQ
Trigger: CTGTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCC...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp CGACCAGATGGAGATGCTCAATCGTATGTGACGTGTGAGAACACTTaGGATTCGTTTAAAATTTGTTGGACTTCAAAACCTCCAACGGGA +
Preference number: 2 (lower is better)
Translates to: RPDGDAQSYVTCENT*DSFKICWTSKPPTG
Trigger: TCCCGTTGGAGGTTTTGAAGTCCAACAAATTTTAAACGAATCCAAAGTGTTCTCACACGTCACATACGATTGAGCATCTCCATCTGGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGTCCCAAGACCGTTCTaGCTGCTCTCAAACCACTGT +
Preference number: 2 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQVPRPF*LLSNHC
Trigger: ACAGTGGTTTGAGAGCAGGCAGAACGGTCTTGGGAC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTACTCGCATCTTCCGATaGCTTTTGAGAAACTCAAGC +
Preference number: 2 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSTRIFR*LLRNSS
Trigger: GCTTGAGTTTCTCAAAAGCCATCGGAAGATGCGAGT...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCTACAAAAAGAAGAATaGAATGAGCACGTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGELQKEE*NEHVAV
Trigger: CACAGCCACGTGCTCATTCCATTCTTCTTTTTGTAG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp GAAAACATGAATTTCAATCAATCAGGATCCCTTTCCATAAGCACCTaGAGAGCAAATTCACAAGCCATCCATTTGCAGGGACCTTCGCAA +
Preference number: 2 (lower is better)
Translates to: ENMNFNQSGSLSIST*RANSQAIHLQGPSQ
Trigger: TTGCGAAGGTCCCTGCAAATGGATGGCTTGTGAATTTGCTCTCAAGGTGCTTATGGAAAGGGATCCTGATTGATTGAAATTCATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGGTTAGAATTCTATCCTaGCGATGTGGTCAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQVRILS*RCGQRS
Trigger: ACTTCTCTGACCACATCGTCAGGATAGAATTCTAAC...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCAAGACCGTTCTGCCTaGTCTCAAACCACTGTCTCA +
Preference number: 2 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQQDRSA*SQTTVS
Trigger: TGAGACAGTGGTTTGAGAGCAGGCAGAACGGTCTTG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGTCAGCTTCGTTACAATaGAGAAATGGTTTCCTTTCG +
Preference number: 2 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKSASLQ*RNGFLS
Trigger: CGAAAGGAAACCATTTCTTCATTGTAACGAAGCTGA...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGGAGACTGTGGAGTTGTaGGTAATAAACTTTAAGCAC +
Preference number: 2 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKETVEL*VINFKH
Trigger: GTGCTTAAAGTTTATTACCCACAACTCCACAGTCTC...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGACCCAATATACACTTTaGAATGAAACTGGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKTQYTL*NETGGF
Trigger: GAAGCCACCAGTTTCATTCCAAAGTGTATATTGGGT...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTaGTGTCAGACCATTACGAAATGGTCCTTCCCCTTGCAAACAGAT +
Preference number: 2 (lower is better)
Translates to: KQQSPLLVLQKSNLL*CQTITKWSFPLQTD
Trigger: ATCTGTTTGCAAGGGGAAGGACCATTTCGTAATGGTCTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGAATGTGTTGGCGATCTaGAATCTAGCCAATCTGGAG +
Preference number: 2 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQNVLAI*NLANLE
Trigger: CTCCAGATTGGCTAGATTTCAGATCGCCAACACATT...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGTCTGAAAATAGAATCTaGCAGCAACAATTCTGTACG +
Preference number: 2 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQSENRI*QQQFCT
Trigger: CGTACAGAATTGTTGCTGTCAGATTCTATTTTCAGA...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp GCCGCCTGCTGGTGGGGCGTGGGCACGTGGGCACGCTaGGGCACGGCGGGAAGCCGCGAGGGCAGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: AACWWGVGTWAR*GTAGSREGRAD
Trigger: GTCTGCCCTGCCCTCGCGGCTTCCCGCCGTGCCGCAGCGTGCCCACGTGCCCACGCCCCACCAGCAGGCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp CAGTCCCAGCGGGCCACGGCCTCCGGGACAGCCGCCTaGTGGTGGGGCGTGGGCACGTGGGCACGCTGCGGC +
Preference number: 3 (lower is better)
Translates to: QSQRATASGTAA*WWGVGTWARCG
Trigger: GCCGCAGCGTGCCCACGTGCCCACGCCCCACCAGCAGGCGGCTGTCCCGGAGGCCGTGGCCCGCTGGGACTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp CGGGCTGCAGCCCCTGGCCCCGGAGATGACGGCTGGTaGCCGTGCTTGAGGCGTCAGGCCAGCTCGCGGTGC +
Preference number: 3 (lower is better)
Translates to: RAAAPGPGDDGW*PCLRRQASSRC
Trigger: GCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGGGCTGCAGCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 72 bp CCCCTGGCCCCGGAGATGACGGCTGGTGCCCGTGCTTaGGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCC +
Preference number: 3 (lower is better)
Translates to: PLAPEMTAGARA*GVRPARGASTA
Trigger: GGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp GCAGCCCCTGGCCCCGGAGATGACGGCTGGTGCCCGTaGTTGAGGCGTCAGGCCAGCTCGCGGTGCCAGCAC +
Preference number: 3 (lower is better)
Translates to: AAPGPGDDGWCP*LRRQASSRCQH
Trigger: GTGCTGGCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGGGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp CCACGGCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTaGCTTCCGCGTGTCCGTGTGTCTGCGCGTCGCCGG +
Preference number: 3 (lower is better)
Translates to: PRRPLRDPPECA*LPRVRVSARRR
Trigger: CCGGCGACGCGCAGACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp ACAAAGTGGCCCTCCAGAACCAGAGCCCTGGGACGCTaGGGAGGGGCGGCCAGTCCCAGCGGGCCACGGCCT +
Preference number: 3 (lower is better)
Translates to: TKWPSRTRALGR*GGAASPSGPRP
Trigger: AGGCCGTGGCCCGCTGGGACTGGCCGCCCCTCCCCAGCGTCCCAGGGCTCTGGTTCTGGAGGGCCACTTTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp TGGTGCCCGTGCTTGAGGCGTCAGGCCAGCTCGCGGTaGCAGCACTGCCAGGCTCGGCTGGCCACAGGAAAC +
Preference number: 3 (lower is better)
Translates to: WCPCLRRQASSR*QHCQARLATGN
Trigger: GTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp GTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTaGACGCTGGGTGTCCCTGGGTGCTCCAAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: VGLGGRKASRGC*TLGVPGCSKRA
Trigger: GGCTCTCTTGGAGCACCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp TCTTCCACGGCGTCCCTTGCGGGACCCGCCAGAGTGTaGTTGGCTTCCGCGTGTCCGTGTGTCTGCGCGTCG +
Preference number: 3 (lower is better)
Translates to: SSTASLAGPARV*LASACPCVCAS
Trigger: CGACGCGCAGACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp CCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCCTaGGCGGCAGAAAGGCTTCCCGTGGCTGTTGCACGC +
Preference number: 3 (lower is better)
Translates to: PRRACASRDLWA*AAERLPVAVAR
Trigger: GCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACATGCACGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp GCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTaGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTT +
Preference number: 3 (lower is better)
Translates to: ATPRRACASRDL*AWAAERLPVAV
Trigger: AACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp TGGGCGGCAGAAAGGCTTCCCGTGGCTGTTGCACGCTaGGTGTCCCTGGGTGCTCCAAGAGAGCCCCACGGT +
Preference number: 3 (lower is better)
Translates to: WAAERLPVAVAR*VSLGAPREPHG
Trigger: ACCGTGGGGCTCTCTTGGAGCACCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp GAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTaGCTGTTGCACGCTGGGTGTCCCTGGGTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: ETCGPGRQKGFP*LLHAGCPWVLQ
Trigger: TTGGAGCACCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp CTGTTGCCACAGGCTCCTTTCTTCCACGGCGTCCCTTaGGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTG +
Preference number: 3 (lower is better)
Translates to: LLPQAPFFHGVP*GTRQSVLGFRV
Trigger: CACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAGAAAGGAGCCTGTGGCAACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp CCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTaGCCTGGACGCTTGCTGTGGAGAAGAGCCGAGTGT +
Preference number: 3 (lower is better)
Translates to: PACRRRGRSSAI*PGRLLWRRAEC
Trigger: ACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp AGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTaGCCACAGGAAACTGTCCCACCGATTCCTGCTGTT +
Preference number: 3 (lower is better)
Translates to: RPARGASTARLG*PQETVPPIPAV
Trigger: AACAGCAGGAATCGGTGGGACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp CTGGGTGTCCCTGGGTGCTCCAAGAGAGCCCCACGGTaGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: LGVPGCSKRAPR*DAGVTRESFLA
Trigger: AGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGACACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp CCACAGGGAGAACACATGAAGGAACCCTCCCTGACGTaGTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGC +
Preference number: 3 (lower is better)
Translates to: PQGEHMKEPSLT*SRLQTPRQILC
Trigger: GCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGACCACGTCAGGGAGGGTTCCTTCATGTGTTCTCCCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp GCAGGTTCACCAGGCAACAAGGGTCCCTGGGTTCCTTaGAGCCACAGGCTCCAAAATCCAGGGCTGGCCACG +
Preference number: 3 (lower is better)
Translates to: AGSPGNKGPWVP*SHRLQNPGLAT
Trigger: CGTGGCCAGCCCTGGATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACCCTTGTTGCCTGGTGAACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGGCTGGTGCCCGTGCTaGAGGCGTCAGGCCAGCTCG +
Preference number: 3 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKGWCPC*RRQASS
Trigger: CGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp CTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTaGACGCTTGCTGTGGAGAAGAGCCGAGTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: LQTPRQILCHLP*TLAVEKSRVCL
Trigger: AAGACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCACACGGGAAAGTTTCTaGGCTGAGCTTCAAGACAGA +
Preference number: 3 (lower is better)
Translates to: VPPADAEADPLPSALDACTRESF*AELQDR
Trigger: TCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGT...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGGCTTCCCGTGGCTGTaGCACGCTGGGTGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRGFPWL*HAGCPW
Trigger: CCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCTTCCACGGCGTCCCTaGCGGGACCCGCCAGAGTGT +
Preference number: 3 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVLPRRP*RDPPEC
Trigger: ACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAG...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 72 bp GGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTaGCACGGGAAAGTTTCTTGGCTGAGCTTCAAGACA +
Preference number: 3 (lower is better)
Translates to: GAPREPHGGTQA*HGKVSWLSFKT
Trigger: TGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp AGACTGGCTGTCCTGGTCAGGCAATCATACCCTCCCTaGAGGTTCACCAGGCAACAAGGGTCCCTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: RLAVLVRQSYPP*RFTRQQGSLGS
Trigger: GGAACCCAGGGACCCTTGTTGCCTGGTGAACCTGCAGGGAGGGTATGATTGCCTGACCAGGACAGCCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp GGGTTCCTTGCAGCCACAGGCTCCAAAATCCAGGGCTaGCCACGTGGCTGCAGTGGAAAAACCCAAGTGGGT +
Preference number: 3 (lower is better)
Translates to: GFLAATGSKIQG*PRGCSGKTQVG
Trigger: ACCCACTTGGGTTTTTCCACTGCAGCCACGTGGCCAGCCCTGGATTTTGGAGCCTGTGGCTGCAAGGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp TGGGCCCTGCCACTGCTCTGTGCCATGAATGGGGAATaGACCAGCTCCTCTTGCCAATCTGGGCTTCAGAGC +
Preference number: 3 (lower is better)
Translates to: WALPLLCAMNGE*TSSSCQSGLQS
Trigger: GCTCTGAAGCCCAGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp AAGCCGCGAGGGCAGGGCAGACGCCAAGAGGCCCAGTaGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAG +
Preference number: 3 (lower is better)
Translates to: KPRGQGRRQEAQ*RHQGFPQRDIK
Trigger: CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCTGCCCTGCCCTCGCGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTCAGCTCGGCCGCCTGTaGCCACAGGCTCCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSQLGRL*PQAPFF
Trigger: GAAGAAAGGAGCCTGTGGCAACAGGCGGCCGAGCTG...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp TCCAAGAGAAACGGATTAAATTACAGAGGTGAATGGTaGCCACGGCCAGTGCGCAGCTCACGGCGGGCGCGA +
Preference number: 3 (lower is better)
Translates to: SKRNGLNYRGEW*PRPVRSSRRAR
Trigger: TCGCGCCCGCCGTGAGCTGCGCACTGGCCGTGGCCACCATTCACCTCTGTAATTTAATCCGTTTCTCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTACACGGGAAAGTTTCTaGGCTGAGCTTCAAGACAGA +
Preference number: 3 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPTRESF*AELQDR
Trigger: TCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGT...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp GCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTaGTGTGGAGAAGAGCCGAGTGTGTCTTCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: AEADPLPSALDA*CGEEPSVSSKK
Trigger: TTTCTTTGAAGACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp TGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTaGTCGCTTGCTGACTCCCAGCCAGTGCCCCCAAGG +
Preference number: 3 (lower is better)
Translates to: WRHQGFPQRDIK*SLADSQPVPPR
Trigger: CCTTGGGGGCACTGGCTGGGAGTCAGCAAGCGAGCACTTTATATCCCTTTGAGGGAAACCCTGATGACGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGTAATACTACTAGTGTaGAAAGTTAAAAAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: VPPADAEADPLPSALDACVILLV*KVKKSP
Trigger: GGGGCTCTTTTTAACTTTCAACACTAGTAGTATTAC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp GGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCTGTaGAGAAGAGCCGAGTGTGTCTTCAAAGAAAAGGCT +
Preference number: 3 (lower is better)
Translates to: GRSSAICPGRLL*RRAECVFKEKA
Trigger: AGCCTTTTCTTTGAAGACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACCCGCCAGAGTGTGCTaGGCTTCCGCGTGTCCGTGT +
Preference number: 3 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLPARVC*ASACPC
Trigger: ACACGGACACGCGGAAGCCAAGCACACTCTGGCGGG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 72 bp CAGACAATCCAAGAGAAACGGATTAAATTACAGAGGTaGATGGTGGCCACGGCCAGTGCGCAGCTCACGGCG +
Preference number: 3 (lower is better)
Translates to: QTIQEKRIKLQR*MVATASAQLTA
Trigger: CGCCGTGAGCTGCGCACTGGCCGTGGCCACCATTCACCTCTGTAATTTAATCCGTTTCTCTTGGATTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATATGTGCATGAAGGCTaGGAGACGGGAGCGGTTCTG +
Preference number: 3 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTYVHEG*ETGAVL
Trigger: CAGAACCGCTCCCGTCTCCAAGCCTTCATGCACATA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp ACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTaGTGTCACTCCGAAAAGACCTACGGTCCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: TAPRTDQERHNR*CHSEKTYGPSS
Trigger: AGAGGAGGGACCGTAGGTCTTTTCGGAGTGACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCCCGCCAGAGTGTGCTaGGCTTCCGCGTGTCCGTGT +
Preference number: 3 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKPARVC*ASACPC
Trigger: ACACGGACACGCGGAAGCCAAGCACACTCTGGCGGG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGATCTGCCCTGGACGCTaGCTGTGGAGAAGAGCCGAG +
Preference number: 3 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEICPGR*LWRRAE
Trigger: CTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGAT...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 72 bp CTGAGCACGGTGTGTCTGAACTTCTGCCCCCAAGTCTaGACCCAATATACACTTTGGAATGAAACTGGTGGC +
Preference number: 3 (lower is better)
Translates to: LSTVCLNFCPQV*TQYTLWNETGG
Trigger: GCCACCAGTTTCATTCCAAAGTGTATATTGGGTTCAGACTTGGGGGCAGAAGTTCAGACACACCGTGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGGATTTGCCACTTTTTaGGAACTACCTCCATTTTTC +
Preference number: 3 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSGFATF*ELPPFF
Trigger: GAAAAATGGAGGTAGTTCCAAAAAAGTGGCAAATCC...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp CATTCCGATCGTAACACTGCAAGTGTGCCTACCACATaGTTCACGACCAGATGGAGATGCTCAATCGTATGT +
Preference number: 3 (lower is better)
Translates to: HSDRNTASVPTT*FTTRWRCSIVC
Trigger: ACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGGAATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp ACTGTTGAAGAGAAAAAGAGTAAAGACTGGCTGTCCTaGTCAGGCAATCATACCCTCCCTGCAGGTTCACCA +
Preference number: 3 (lower is better)
Translates to: TVEEKKSKDWLS*SGNHTLPAGSP
Trigger: TGGTGAACCTGCAGGGAGGGTATGATTGCCTGACCAGGACAGCCAGTCTTTACTCTTTTTCTCTTCAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGATGGACCAGCTCCTCTaGCCAATCTGGGCTTCAGAG +
Preference number: 3 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKMDQLL*PIWASE
Trigger: CTCTGAAGCCCAGATTGGCAAGAGGAGCTGGTCCAT...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 72 bp AGAAAAGGCTACACAGTAATGCTCTCAGCACATTTGTaGAGCTGGAGTGAGCTGACAGATGAAACGTGCCTC +
Preference number: 3 (lower is better)
Translates to: RKGYTVMLSAHL*SWSELTDETCL
Trigger: GAGGCACGTTTCATCTGTCAGCTCACTCCAGCTTCACAAATGTGCTGAGAGCATTACTGTGTAGCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGTCACAAGCCATCCATTaGCAGGGACCTTCGCAATCT +
Preference number: 3 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQSQAIH*QGPSQS
Trigger: AGATTGCGAAGGTCCCTGCAAATGGATGGCTTGTGA...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp TTAATAAAAAGCATTCCGATCGTAACACTGCAAGTGTaGCTACCACATGCTTCACGACCAGATGGAGATGCT +
Preference number: 3 (lower is better)
Translates to: LIKSIPIVTLQV*LPHASRPDGDA
Trigger: AGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGGAATGCTTTTTATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp CAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTaGGTGAGTAAGGTTCAAGCCCCCTGTATAGATAGA +
Preference number: 3 (lower is better)
Translates to: QLGFLPHSVRSS*VSKVQAPCIDR
Trigger: TCTATCTATACAGGGGGCTTGAACCTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp AACAGGCATCAGGTAGGTTACAGTGTCGTTACAACTTaGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGT +
Preference number: 3 (lower is better)
Translates to: NRHQVGYSVVTT*FSTTFRKKLLG
Trigger: ACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACTGTAACCTACCTGATGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp AGTGGAAAGAAGGTGACCGTCAGAAGAGGATATCATTaGTCGGTGAAAATCCACCCACACAAAACAAGACAA +
Preference number: 3 (lower is better)
Translates to: SGKKVTVRRGYH*SVKIHPHKTRQ
Trigger: TTGTCTTGTTTTGTGTGGGTGGATTTTCACCGACCAATGATATCCTCTTCTGACGGTCACCTTCTTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 72 bp CTGCCCCCAAGTCTGAACCCAATATACACTTTGGAATaGAACTGGTGGCTTCATGTGCTGGAAAATAAGTTA +
Preference number: 3 (lower is better)
Translates to: LPPSLNPIYTLE*NWWLHVLENKL
Trigger: TAACTTATTTTCCAGCACATGAAGCCACCAGTTTCATTCCAAAGTGTATATTGGGTTCAGACTTGGGGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 72 bp GAGGCCGAGCTAAGAACACGCTCAGCTTCGTTACAATaGAGAAATGGTTTCCTTTCGATGCAAAGTATAATT +
Preference number: 3 (lower is better)
Translates to: EAELRTRSASLQ*RNGFLSMQSII
Trigger: AATTATACTTTGCATCGAAAGGAAACCATTTCTTCATTGTAACGAAGCTGAGCGTGTTCTTAGCTCGGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp CTTTATTTACACCACAAGATAACACGTTGCGTGATGTaGTACAGAATACTGGACTCCAGTGAAGTGGAAAGA +
Preference number: 3 (lower is better)
Translates to: LYLHHKITRCVM*YRILDSSEVER
Trigger: TCTTTCCACTTCACTGGAGTCCAGTATTCTGTACCACATCACGCAACGTGTTATCTTGTGGTGTAAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGACAGAGACTGTGGAGTaGTGGGTAATAAACTTTAAG +
Preference number: 3 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKTETVE*WVINFK
Trigger: CTTAAAGTTTATTACCCACAACTCCACAGTCTCTGT...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTGGATTTGCCACTTTTTaGGAACTACCTCCATTTTTC +
Preference number: 3 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSGFATF*ELPPFF
Trigger: GAAAAATGGAGGTAGTTCCAAAAAAGTGGCAAATCC...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR TCA 72 bp ATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTaGCGTGTGAGAACACTTTGGATTCGTTTAAAATTT +
Preference number: 3 (lower is better)
Translates to: MLHDQMEMLNRM*RVRTLWIRLKF
Trigger: AAATTTTAAACGAATCCAAAGTGTTCTCACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR GCA 72 bp TTTCCTTTCGATGCAAAGTATAATTGTAAACCACAGTaGTCGCACAGTTCACGACTGCTTAAAGTGAAATCT +
Preference number: 3 (lower is better)
Translates to: FPFDAKYNCKPQ*SHSSRLLKVKS
Trigger: AGATTTCACTTTAAGCAGTCGTGAACTGTGCGAGCACTGTGGTTTACAATTATACTTTGCATCGAAAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CCA 72 bp GCTAAGAACACGCTCAGCTTCGTTACAATGAAGAAATaGTTTCCTTTCGATGCAAAGTATAATTGTAAACCA +
Preference number: 3 (lower is better)
Translates to: AKNTLSFVTMKK*FPFDAKYNCKP
Trigger: TGGTTTACAATTATACTTTGCATCGAAAGGAAACCATTTCTTCATTGTAACGAAGCTGAGCGTGTTCTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR-3UTR CAA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGTAATACTACTAGTGTaGAAAGTTAAAAAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQVILLV*KVKKSP
Trigger: GGGGCTCTTTTTAACTTTCAACACTAGTAGTATTAC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCCGTCACAAGGCCAGTaGGGGCGGGCGGCGCTCGCC +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRPSQGQ*GRAALA
Trigger: GGCGAGCGCCGCCCGCCCTCACTGGCCTTGTGACGG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp GCCCCTGGCCCCGGAGATGACGGCTGGTGCCCGTGCTaGAGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: APGPGDDGWCPC*RRQASSRCQHC
Trigger: GCAGTGCTGGCACCGCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGGCTGGGTCCGGAGCCTaGGGCGCTGCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRAGSGA*GAAARG
Trigger: TCCGCGTGCAGCAGCGCCCCAGGCTCCGGACCCAGC...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGACCCTGGCCCCGGAGATaGCGGCTGGTGCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGPWPRR*RLVPVL
Trigger: AAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGG...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAACCGTCACAAGGCCAGTaGGGGCGGGCGGCGCTCGCC +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTREPSQGQ*GRAALA
Trigger: GGCGAGCGCCGCCCGCCCTCACTGGCCTTGTGACGG...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGTCTCCGCCGGGATGCTaGGGACGGCGGGCGCGATAC +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRSPPGC*GRRARY
Trigger: GTATCGCGCCCGCCGTCCCCAGCATCCCGGCGGAGA...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGTCACTGGGCTGGCGCTaGCCCGGCTCCACCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRSLGWR*PGSTSR
Trigger: ACGGGAGGTGGAGCCGGGCCAGCGCCAGCCCAGTGA...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGGGTGGCTCTCCGGCTaGCGGGCTGGCTCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVGWLSG*RAGSLG
Trigger: GCCAAGCGAGCCAGCCCGGCAGCCGGAGAGCCACCC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGATCGCGGTGCCAGCACTaGCAGGCTCGGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGSRCQH*QARLAT
Trigger: TGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGA...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTTCCGGGACAGCCGCCTaGTGGTGGGGCGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCSGTAA*WWGVGT
Trigger: CGTGCCCACGCCCCACCAGCAGGCGGCTGTCCCGGA...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGAGCCCCCAAGAGGGGTaGGGTGGCCCTCCACGGCAT +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRSPQEG*GGPPRH
Trigger: ATGCCGTGGAGGGCCACCCCACCCCTCTTGGGGGCT...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAATGGCGGTCAGGTCGTaGCCTCCCTCGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGMAVRS*PPSRAR
Trigger: CCTGGCCCTCGAGGGAGGCCACGACCTGACCGCCAT...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp TCCACGGCGTCCCTTGCGGGACCCGCCAGAGTGTGCTaGGCTTCCGCGTGTCCGTGTGTCTGCGCGTCGCCG +
Preference number: 4 (lower is better)
Translates to: STASLAGPARVC*ASACPCVCASP
Trigger: CGGCGACGCGCAGACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGTCGTCTCCGCCGGGATaGTGGGGACGGCGGGCGCGA +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGSSPPG*WGRRAR
Trigger: TCGCGCCCGCCGTCCCCAGCATCCCGGCGGAGACGA...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGAGTCTCTCGGCGTCCTaGTGGCCCGCCGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLSLSAS*WPAVPA
Trigger: TGCGGGCACGGCGGGCCAGCAGGACGCCGAGAGACT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGAAGAGGGCTGTGCGCTaGCCCTCCGTCCCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRKRAVR*PSVPLQ
Trigger: TTGGAGCGGGACGGAGGGGCAGCGCACAGCCCTCTT...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCGGGCCCTGTaGCCACCTCATCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLPRRAL*PPHQEP
Trigger: GGGCTCCTGATGAGGTGGGCACAGGGCCCGGCGTGG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGCTGGGTCCGGAGCCTaGGGCGCTGCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGAGSGA*GAAARG
Trigger: TCCGCGTGCAGCAGCGCCCCAGGCTCCGGACCCAGC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCTCTCGGCGTCCTGCTaGCCCGCCGTGCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGLSASC*PAVPAE
Trigger: CTCTGCGGGCACGGCGGGCCAGCAGGACGCCGAGAG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTTCACTGGGCTGGCGCTaGCCCGGCTCCACCTCCCGT +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCSLGWR*PGSTSR
Trigger: ACGGGAGGTGGAGCCGGGCCAGCGCCAGCCCAGTGA...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCCGGGACAGAGGCCTGTaGCCGCCGAAGGACACGGGG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVRDRGL*PPKDTG
Trigger: CCCCGTGTCCTTCGGCGGCCACAGGCCTCTGTCCCG...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCGGCGTGCTCGGGGTaGCTGCTGCTACTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLPACSG*LLLLPQ
Trigger: CTGCGGGAGTAGCAGCAGCCACCCCGAGCACGCCGG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCCAAGAGGGGTGGGGTaGCCCTCCACGGCATCGAAG +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRPRGVG*PSTASK
Trigger: CTTCGATGCCGTGGAGGGCCACCCCACCCCTCTTGG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCCGAGGCGTCGCAAATaGCGGTCAGGTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRPRRRK*RSGRGL
Trigger: GAGGCCACGACCTGACCGCCATTTGCGACGCCTCGG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAAGAGAGCCCCACGGTaGGACGCAGGCGTGACACGG +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGKRAPR*DAGVTR
Trigger: CCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTT...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGGCGTCTCGAGACCTGTaGGCCTGGGCGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRASRDL*AWAAER
Trigger: CCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGC...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCCAGAACCAGAGCCCTaGGACGCTGGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACPEPEP*DAGEGR
Trigger: CCGCCCCTCCCCAGCGTCCCAGGGCTCTGGTTCTGG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTGGAGGGCGGGAAGGGTaGGTCTCTCGGCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCGGREG*VSRRPA
Trigger: AGCAGGACGCCGAGAGACTCACCCTTCCCGCCCTCC...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGTGCTCCCAGGCCTGTaGCGAGGGGTGCTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVVLPGL*RGVLVP
Trigger: CGGCACAAGCACCCCTCGTCACAGGCCTGGGAGCAC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345617.7
CDS-3UTR GCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCTGGAGCTGCGCCTCGTaGTGCCGGGAGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVWSCAS*CRESCS
Trigger: CGAGCAGCTCTCCCGGCAGCACGAGGCGCAGCTCCA...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTCGCCCCAGTGGGCGGTaGTGCCGCAGCTTGTGGATG +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCRPSGR*CRSLWM
Trigger: CATCCACAAGCTGCGGCAGCACCGCCCACTGGGGCG...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCTCTCAATGGGCTCCTaGTTCACCTGCACGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRLSMGS*FTCTPA
Trigger: GGCCGGCGTGCAGGTGAAGCAGGAGCCCATTGAGAG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGATGGTGGATCCGCTGCTaGTCCAGCAGGAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGWWIRC*SSRRAC
Trigger: GCAAGCCCTCCTGCTGGAGCAGCAGCGGATCCACCA...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCGTGCTCGGGGTGGCTaGTGCTACTCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACRARGG*CYSRRC
Trigger: GCACCTGCGGGAGTAGCAGCAGCCACCCCGAGCACG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAGCTGCCCCCGCCGAGTaGACCTCGTTCCATATGGTG +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGAAPAE*TSFHMV
Trigger: CACCATATGGAACGAGGTGCACTCGGCGGGGGCAGC...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAGCAGCTTCGAGGGAGTaGTACAGGGGCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGAASRE*YRGGSS
Trigger: AGAGGAGCCGCCCCTGTAGCACTCCCTCGAAGCTGC...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCAGGCCAGCTCGCGGTaGCAGCACTGCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGQASSR*QHCQAR
Trigger: CCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGATCCCGGAGCTGTTGTTaGGTGAGCTGGGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGSRSCC*VSWVRS
Trigger: GCTCCGGACCCAGCTCACCCAACAACAGCTCCGGGA...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAGGGAGAGCCTCTGCTaGAGGGCGGGAAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGRESLC*RAGRVS
Trigger: ACTCACCCTTCCCGCCCTCCAGCAGAGGCTCTCCCT...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCTCCGGCTGCCGGGCTaGCTCGCTTGGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLLRLPG*LAWLGD
Trigger: ATCCCCAAGCCAAGCGAGCCAGCCCGGCAGCCGGAG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGAACCCTCCCTGACGTaGTCCCGCCTGCAGACGCCG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVEPSLT*SRLQTP
Trigger: CGGCGTCTGCAGGCGGGACCACGTCAGGGAGGGTTC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGACACGAGGCCTGTCGTaGACCTCGGCTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLTRGLS*TSAWWG
Trigger: CCCCCACCAAGCCGAGGTTCACGACAGGCCTCGTGT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGATGGCCACATCCACCGTaGTGGGCATGTGGTTCACGC +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGWPHPP*WACGSR
Trigger: GCGTGAACCACATGCCCAGCACGGTGGATGTGGCCA...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTCAGGTCCATGGGCACTaGCGAGGGGGCCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCQVHGH*RGGHLQ
Trigger: CTGCAAGTGGCCCCCTCGGCAGTGCCCATGGACCTG...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTAGCTCCTGCTGCAGCTaGTGCTCCCGCAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCSSCCS*CSRRAG
Trigger: GCCGGCCCTGCGGGAGCAGCAGCTGCAGCAGGAGCT...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGCCTGTGACGAGGGGTaGTTGTGCCGGCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGACDEG*LCRRLL
Trigger: GAGCAGCCGCCGGCACAAGCACCCCTCGTCACAGGC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345617.7
CDS-3UTR GCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGTGGATGACCAGGTGCTaGAGAGCCTGGGCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRWMTRC*RAWAFW
Trigger: CCAGAACGCCCAGGCTCTGCAGCACCTGGTCATCCA...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAAGCTCGGGGTGGCTGCTaGTACTCCCGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTREARGGC*YSRRCT
Trigger: AGTGCACCTGCGGGAGTAGCAGCAGCCACCCCGAGC...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGTCTGTGACGAGGGGTaGTTGTGCCGGCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACVCDEG*LCRRLL
Trigger: GAGCAGCCGCCGGCACAAGCACCCCTCGTCACAGAC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGCAGAGGCAGCGCCGTaGCCACATCCACCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGAEAAP*PHPPCW
Trigger: CCAGCACGGTGGATGTGGCCACGGCGCTGCCTCTGC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCTCTCGGCGTCCTGCTaGCCCGCCGTGCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPLSASC*PAVPAE
Trigger: CTCTGCGGGCACGGCGGGCCAGCAGGACGCCGAGAG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCTGCTGCCGCAGCTTGTaGATGGAGGGGGACACCCGG +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACCCRSL*MEGDTR
Trigger: CCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAGCA...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTCCTGCTCACTGGGCTaGCGCTGGCCCGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCSCSLG*RWPGST
Trigger: GGTGGAGCCGGGCCAGCGCCAGCCCAGTGAGCAGGA...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGGAGAACGCCCCGCTGTaGAGGTTGTGCGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLENAPL*RLCAAG
Trigger: GCCTGCAGCGCACAACCTCCACAGCGGGGCGTTCTC...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAACGAGACCTGTGGGCCTaGGCGGCAGAAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTRERDLWA*AAERLP
Trigger: GGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCG...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCGCCGCACACCGCTATaGTTCACAGAGGCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACRRTPL*FTEAGH
Trigger: GTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCCAGAACCAGAGCCCTaGGACGCTGGGGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCPEPEP*DAGEGR
Trigger: CCGCCCCTCCCCAGCGTCCCAGGGCTCTGGTTCTGG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCAAGTACCGGGACGGTaGGGGCTGGGTCACAGACGT +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACQVPGR*GLGHRR
Trigger: ACGTCTGTGACCCAGCCCTCACCGTCCCGGTACTTG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCTCTGCCACAGGCAGTaGGAACTGGTGGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLLCHRQ*ELVVQA
Trigger: CGCCTGGACCACCAGTTCTCACTGCCTGTGGCAGAG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACGGTGGCAGACGCGGGTaGGGACTGCGCCCGGGACAG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYGGRRG*GLRPGQ
Trigger: CTGTCCCGGGCGCAGTCCTCACCCGCGTCTGCCACC...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGGTGCCTCGTGTCAACTaGATTCGGCAGCTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLVPRVN*IRQLGR
Trigger: GCGGCCGAGCTGCCGAATTCAGTTGACACGAGGCAC...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAAGTGCCTCGTGTCAACTaGATTCGGCAGCTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTREVPRVN*IRQLGR
Trigger: GCGGCCGAGCTGCCGAATTCAGTTGACACGAGGCAC...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTCGGGAGAGCTGCTCGTaGTGCCTCTGGAACTCAGCG +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCRESCS*CLWNSA
Trigger: CGCTGAGTTCCAGAGGCAGCACGAGCAGCTCTCCCG...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGAGCTGGTGGATCCGCTaGTGCTCCAGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLSWWIR*CSSRRA
Trigger: AGCCCTCCTGCTGGAGCAGCAGCGGATCCACCAGCT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGCTGCCCCCGCCGAGTaGACCTCGTTCCATATGGTG +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACAAPAE*TSFHMV
Trigger: CACCATATGGAACGAGGTGCACTCGGCGGGGGCAGC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGACTGCAGAAGCTTGGCTaGCACGGCCACGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGLQKLG*HGHGVE
Trigger: TTCAACTCCGTGGCCGTGGCAGCCAAGCTTCTGCAG...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAACGCTCAACCTCTGCTaGAGAAGCTTGGCTGCCACG +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGTLNLC*RSLAAT
Trigger: CGTGGCAGCCAAGCTTCTGCAGCAGAGGTTGAGCGT...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGCAGCTTCGAGGGAGTaGTACAGGGGCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVAASRE*YRGGSS
Trigger: AGAGGAGCCGCCCCTGTAGCACTCCCTCGAAGCTGC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTGCGTGTCCGTGTGTCTaGGCGTCGCCGGCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCACPCV*ASPASV
Trigger: GACAGACGCCGGCGACGCGCAGACACACGGACACGC...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGGACCCGCCAGAGTGTaGTTGGCTTCCGCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGGPARV*LASACP
Trigger: CGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGTTCCACGGCGTCCCTTaGGGGACCCGCCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGFHGVP*GTRQSV
Trigger: CACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAA...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGTCTGCCCTGGACGCTTaGTGTGGAGAAGAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRSALDA*CGEEPS
Trigger: ACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGA...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCCGGGACGGTGAGGGCTaGGTCACAGACGTTCAAGCG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVRDGEG*VTDVQA
Trigger: CGCTTGAACGTCTGTGACCCAGCCCTCACCGTCCCG...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAACCACATCCACCGTGCTaGGCATGTGGTTCACGCGGG +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTREPHPPC*ACGSRG
Trigger: CCCGCGTGAACCACATGCCCAGCACGGTGGATGTGG...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCCAGGCGCAGGTCCATaGGCACTGCCGAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPPGAGP*ALPRGP
Trigger: TGGCCCCCTCGGCAGTGCCCATGGACCTGCGCCTGG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCCGCCAGAGTGTGCTTaGCTTCCGCGTGTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACPPECA*LPRVRV
Trigger: CACACGGACACGCGGAAGCCAAGCACACTCTGGCGG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGACCTGGACGCTTGCTGTaGAGAAGAGCCGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGPGRLL*RRAECV
Trigger: GACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGG...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTTCTGCTGCTTCTGCTTaGGCGCCAGGAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCSAASA*APGAPA
Trigger: AGCAGGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGA...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGTGCTTCTCCAGCTCCTaGTCCTGGCGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGCFSSS*SWRCLS
Trigger: GGAGAGGCACCGCCAGGAGCAGGAGCTGGAGAAGCA...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCGCCCCAGTGGGCGGTaGTGCCGCAGCTTGTGGATG +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPRPSGR*CRSLWM
Trigger: CATCCACAAGCTGCGGCAGCACCGCCCACTGGGGCG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGGATGCACTCGCATTTaGCCCGGAGGCCCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGGCTRI*PGGPSP
Trigger: AGGAGACGGGCCTCCGGGGCAAATGCGAGTGCATCC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCCACGCCGGGCCCTGTaGCCACCTCATCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYPRRAL*PPHQEP
Trigger: GGGCTCCTGATGAGGTGGGCACAGGGCCCGGCGTGG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGCGTGTCCGTGTGTCTaGGCGTCGCCGGCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPACPCV*ASPASV
Trigger: GACAGACGCCGGCGACGCGCAGACACACGGACACGC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGGGTCCCTGGGTTCCTTaGAGCCACAGGCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRGPWVP*SHRLQN
Trigger: ATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACC...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCACCGTGCTGGGCATGTaGTTCACGCGGGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVTVLGM*FTRAGF
Trigger: GAATCCTGCCCGCGTGAACCACATGCCCAGCACGGT...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCCAGGCGCAGGTCCATaGGCACTGCCGAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYPGAGP*ALPRGP
Trigger: TGGCCCCCTCGGCAGTGCCCATGGACCTGCGCCTGG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGACAGGCAGTGAGAACTaGTGGTCCAGGCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLTGSEN*WSRRRS
Trigger: GGACCTGCGCCTGGACCACCAGTTCTCACTGCCTGT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGTCGCTGGAAATGCAGTaGTTCAGATTCCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRSLEMQ*FRFRWA
Trigger: GGCCCACCGGAATCTGAACCACTGCATTTCCAGCGA...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGACCTCATCGCTCTCAATaGGCTCCTGCTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGPHRSQ*APASPA
Trigger: TGCAGGTGAAGCAGGAGCCCATTGAGAGCGATGAGG...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCACTGCCAGGCTCGGCTaGCCACAGGAAACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACTARLG*PQETVP
Trigger: TGGGACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGT...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCCAGGGCTGGCCACGTaGCTGCAGTGGAAAAACCCA +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACPGLAT*LQWKNP
Trigger: TGGGTTTTTCCACTGCAGCCACGTGGCCAGCCCTGG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGAAGAGCCTGCTAGCTaGGCCCTGCCACTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACEEPAS*ALPLLC
Trigger: ACAGAGCAGTGGCAGGGCCCAGCTAGCAGGCTCTTC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTTACAGAGGTGAATGGTaGCCACGGCCAGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCYRGEW*PRPVRS
Trigger: GCTGCGCACTGGCCGTGGCCACCATTCACCTCTGTA...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGTCTGGAACTCAGCGATaGGGATCTGCCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRSGTQR*GSASGS
Trigger: AGATCCAGAGGCAGATCCTCATCGCTGAGTTCCAGA...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGGCCACGGAGTTaGAGTAGCAAAAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLPRPRS*SSKSPW
Trigger: CCATGGGCTTTTGCTACTTCAACTCCGTGGCCGTGG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGTCAGCGATGAGGATCTaGCTCTGGATCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRSAMRI*LWICCF
Trigger: GAAGCAGCAGATCCAGAGGCAGATCCTCATCGCTGA...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGAGCTGCTGCAGCTTCTaGTCCCGGTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGSCCSF*SRCCFS
Trigger: GGAGAAGCAGCACCGGGAGCAGAAGCTGCAGCAGCT...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCTGCGTAACAGGGGGCTaGTCCGTCTTTCGGCCACTT +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACCVTGG*SVFRPL
Trigger: AAGTGGCCGAAAGACGGAGCAGCCCCCTGTTACGCA...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCGTGCCACAAGTCTGTaGGCCAAACTCGTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGRATSL*AKLVSA
Trigger: GGCGGAGACGAGTTTGGCGCACAGACTTGTGGCACG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGAAAAGGGAGAGCCTCTaGTGGAGGGCGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGKRESL*WRAGRV
Trigger: CACCCTTCCCGCCCTCCAGCAGAGGCTCTCCCTTTT...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGACCAACCAAGGACTGTaGGTGGAGGGGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGTNQGL*VEGQCS
Trigger: GGAGCACTGCCCCTCCACGCACAGTCCTTGGTTGGT...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCTCTCAATGGGCTCCTaGTTCACCTGCACGCCGGCC +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCLSMGS*FTCTPA
Trigger: GGCCGGCGTGCAGGTGAAGCAGGAGCCCATTGAGAG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCCTCCAGGGTGGCCTTaGGTCCGCGGATGCACTCGC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYPPGWP*VRGCTR
Trigger: GCGAGTGCATCCGCGGACGCAAGGCCACCCTGGAGG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGGCTGGCCACGTGGCTaGAGTGGAAAAACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVGWPRG*SGKTQV
Trigger: CACTTGGGTTTTTCCACTGCAGCCACGTGGCCAGCC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAAGGCTGGCCACGTGGCTaGAGTGGAAAAACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTREGWPRG*SGKTQV
Trigger: CACTTGGGTTTTTCCACTGCAGCCACGTGGCCAGCC...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCCCCTGCCAGGCCTTTaGAGAGGGCGTCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGPLPGL*RGRLHL
Trigger: CAAATGGAGACGCCCTCTGCAAAGGCCTGGCAGGGG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCTGACAGATGAAACGTaGCTCCCCCTGCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACLTDET*LPLPGL
Trigger: AAGGCCTGGCAGGGGGAGGCACGTTTCATCTGTCAG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCAGATCCTCTGCCATCTaGCCTGGACGCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVRSSAI*PGRLLW
Trigger: CCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCT...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCCGAGGCAGATCCTCTaGCATCTGCCCTGGACGCTT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGPRQIL*HLPWTL
Trigger: AAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACGCAGAGGCAGCGCCGTaGCCACATCCACCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYAEAAP*PHPPCW
Trigger: CCAGCACGGTGGATGTGGCCACGGCGCTGCCTCTGC...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGTCGACACTCCGCTCTaGGGTGGAGAACTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVVDTPL*GGELWS
Trigger: TGACCAGAGTTCTCCACCCCAGAGCGGAGTGTCGAC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGGATGTTGGGCAAGGATaGCGATGTGTAGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRDVGQG*RCVEGK
Trigger: CTTCCCCTCTACACATCGCCATCCTTGCCCAACATC...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCCCGGGCTGGCTCGCTTaGCTTGGGGATGATCTTGTT +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVPGWLA*LGDDLV
Trigger: AACAAGATCATCCCCAAGCCAAGCGAGCCAGCCCGG...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCGGGCTGGCTCGCTTaGCTTGGGGATGATCTTGTT +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLPGWLA*LGDDLV
Trigger: AACAAGATCATCCCCAAGCCAAGCGAGCCAGCCCGG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCAGACACGGGGAAGGTaGCAGACGCGGGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCQTRGR*QTRVRT
Trigger: AGTCCTCACCCGCGTCTGCCACCTTCCCCGTGTCTG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGTCTGCTGCAGAAGCTTaGCTGCCACGGCCACGGAGT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGSAAEA*LPRPRS
Trigger: ACTCCGTGGCCGTGGCAGCCAAGCTTCTGCAGCAGA...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAACATGTACAGGACGCTaGGGTCGCTGTAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGTCTGR*GRCRKP
Trigger: AGGCTTTCTACAGCGACCCCAGCGTCCTGTACATGT...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCCAGAAAGGCTTCCCGTaGCTGTTGCACGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVQKGFP*LLHAGC
Trigger: ACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTG...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAATCCAAAATCCAGGGCTaGCCACGTGGCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTRESKIQG*PRGCSG
Trigger: TCCACTGCAGCCACGTGGCCAGCCCTGGATTTTGGA...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGAACAGAGGCGTCCGCTaGCTTCTGCAGATGAACGTT +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRNRGVR*LLQMNV
Trigger: AACGTTCATCTGCAGAAGCCAGCGGACGCCTCTGTT...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543185.6
CDS-3UTR TCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCTGCACGCGGAGTCTGTaGCATCCAACGGACGCTTTT +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVCTRSL*HPTDAF
Trigger: AAAAGCGTCCGTTGGATGTCACAGACTCCGCGTGCA...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGTCTTCCGATGGCTTTTaGGAAACTCAAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRSSDGF*ETQASS
Trigger: GGAGCTGGCTTGAGTTTCTCAAAAGCCATCGGAAGA...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCGGGAGAGCTGCTCGTaGTGCCTCTGGAACTCAGCG +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPRESCS*CLWNSA
Trigger: CGCTGAGTTCCAGAGGCAGCACGAGCAGCTCTCCCG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACATGTGCTCGTGGAGCTaGGCCTCGTGCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYMCSWS*ASCCRE
Trigger: CTCCCGGCAGCACGAGGCGCAGCTCCACGAGCACAT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCTGTTGTTGCTTGATGTaGTCGTGGAGCTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVCCCLM*SWSCAS
Trigger: CGAGGCGCAGCTCCACGAGCACATCAAGCAACAACA...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTTTGTTCTTGAGCTGCTaGAGCTTCTGCTCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCLFLSC*SFCSRC
Trigger: GCACCGGGAGCAGAAGCTGCAGCAGCTCAAGAACAA...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGGGGGACACCCGGTCTaGACCAACCAAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPGGHPV*TNQGLC
Trigger: GCACAGTCCTTGGTTGGTGCAGACCGGGTGTCCCCC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTAGCTGGTGGATCCGCTaGTGCTCCAGCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPSWWIR*CSSRRA
Trigger: AGCCCTCCTGCTGGAGCAGCAGCGGATCCACCAGCT...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCTCACGCTCAACCTCTaGTGCAGAAGCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGLTLNL*CRSLAA
Trigger: GGCAGCCAAGCTTCTGCAGCAGAGGTTGAGCGTGAG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCAAGGCAGAAACACATaGTTCCGAGGCGTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRQGRNT*FRGVAN
Trigger: ATTTGCGACGCCTCGGAAGCATGTGTTTCTGCCTTG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACGCTTCCCGTGGCTGTTaGACGCTGGGTGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYASRGC*TLGVPG
Trigger: CCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGC...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGGGTCCCTGGGTTCCTTaGAGCCACAGGCTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLGPWVP*SHRLQN
Trigger: ATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACC...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCCTGCCACTGCTCTGTaGCATGAATGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACPATAL*HEWGMD
Trigger: GTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGAACAGAGGCGTCCGCTaGCTTCTGCAGATGAACCTG +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLNRGVR*LLQMNL
Trigger: CAGGTTCATCTGCAGAAGCCAGCGGACGCCTCTGTT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345617.7
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTTGCTCGTGCTGCCTCTaGAACTCAGCGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCCSCCL*NSAMRI
Trigger: GATCCTCATCGCTGAGTTCCAGAGGCAGCACGAGCA...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAATGGGGTGGAGAACTCTaGTCAAGGGAACTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTREWGGEL*SRELCC
Trigger: GCAGCACAGTTCCCTTGACCAGAGTTCTCCACCCCA...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTTGCCGGCGGCCTCCATaGACGCCTGGTAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPCRRPP*TPGSSS
Trigger: TGAGGAACTACCAGGCGTCCATGGAGGCCGCCGGCA...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCGCCAGTACTTGCTGTaGATCTCCATGACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRRQYLL*ISMTFS
Trigger: GGAGAAAGTCATGGAGATCCACAGCAAGTACTGGCG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACAAGAGAGCCCCACGGTaGGACGCAGGCGTGACACGG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYKRAPR*DAGVTR
Trigger: CCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGTGGCTGTTGCACGCTaGGTGTCCCTGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPVAVAR*VSLGAP
Trigger: TGGAGCACCCAGGGACACCCAGCGTGCAACAGCCAC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCGCCGCACACCGCTATaGTTCACAGAGGCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYRRTPL*FTEAGH
Trigger: GTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTGAAGAGCCTGCTAGCTaGGCCCTGCCACTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCEEPAS*ALPLLC
Trigger: ACAGAGCAGTGGCAGGGCCCAGCTAGCAGGCTCTTC...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCAAGTACCGGGACGGTaGGGGCTGGGTCACAGACGT +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYQVPGR*GLGHRR
Trigger: ACGTCTGTGACCCAGCCCTCACCGTCCCGGTACTTG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCTTCTCCTTGTTCTTaGGCTGCTGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLPSPCS*AAAASA
Trigger: AGCAGAAGCTGCAGCAGCTCAAGAACAAGGAGAAGG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACTACCGTTCTCCGCGCTaGCGCTCCCGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYYRSPR*RSRSCC
Trigger: ACAACAGCTCCGGGAGCGTCAGCGCGGAGAACGGTA...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGGAGGGCTTGCTGTCTaGAGAGCAGCTCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPGGLAV*RAAPAH
Trigger: GTGAGCAGGAGCTGCTCTTCAGACAGCAAGCCCTCC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGGTGGCAGACGCGGGTaGGGACTGCGCCCGGGACAG +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRGGRRG*GLRPGQ
Trigger: CTGTCCCGGGCGCAGTCCTCACCCGCGTCTGCCACC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGGTGGGACGCAGGCGTaGCACGGGAAAGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPGGTQA*HGKVSW
Trigger: CCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAAAGGTACATATGTGCATaGAGGCTTGGAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTRERYICA*RLGDGS
Trigger: GCTCCCGTCTCCAAGCCTTCATGCACATATGTACCT...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCAGGTACATATGTGCATaGAGGCTTGGAGACGGGAGC +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACRYICA*RLGDGS
Trigger: GCTCCCGTCTCCAAGCCTTCATGCACATATGTACCT...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGATGCCCCATGCATTGCTaGCATGCTCAAAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGCPMHC*HAQKVF
Trigger: AAAGACCTTTTGAGCATGTCAGCAATGCATGGGGCA...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAGAAGTGGAAAGAAGGTaGCCGTCAGAAGAGGATATC +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGEVERR*PSEEDI
Trigger: GATATCCTCTTCTGACGGTCACCTTCTTTCCACTTC...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGCGTGCGCCTCCTTCTaGCCCGGCAGCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKACASF*PGSRSR
Trigger: CCTGGACCGGCTGCCGGGGCAGAAGGAGGCGCACGC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTCTGCACGCCGGCCTGTaGGTGCGCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSLHAGL*VRLLLP
Trigger: GGGCAGAAGGAGGCGCACGCACAGGCCGGCGTGCAG...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGTGTGGGCTTCCGAGTaGACCGTCTGTAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPVWASE*TVCSSS
Trigger: GGAGGAGCTACAGACGGTGCACTCGGAAGCCCACAC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCTTCATTAATGCTGACTaGCCCCGGCATCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVFINAD*PRHLAS
Trigger: GCTTGCCAGATGCCGGGGGCAGTCAGCATTAATGAA...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGATGCCCCCAAGGCCTTTaGAAAGGAAGAAAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGCPQGL*KGRKRL
Trigger: TAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGTCCGGGACAGCCGCCTaGTGGTGGGGCGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRSGTAA*WWGVGT
Trigger: CGTGCCCACGCCCCACCAGCAGGCGGCTGTCCCGGA...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGGCAGTGAGAACTGGTaGTCCAGGCGCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPGSENW*SRRRSM
Trigger: CATGGACCTGCGCCTGGACCACCAGTTCTCACTGCC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCTGCTGGTGCTTCATaGCCAGCATCTCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLPAGAS*PASPVV
Trigger: AACAACAGGAGATGCTGGCCATGAAGCACCAGCAGG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTTCTTCACTTCTGTGCTaGCCACGGCACTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCSSLLC*PRHSLC
Trigger: GCAAAGAGAGTGCCGTGGCCAGCACAGAAGTGAAGA...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGTCGCTGGAAATGCAGTaGTTCAGATTCCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGSLEMQ*FRFRWA
Trigger: GGCCCACCGGAATCTGAACCACTGCATTTCCAGCGA...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTTGTGTAGAGGGGAAGTaGAGCGGCCGAGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPCVEGK*SGRAFS
Trigger: CGAGAAGGCTCGGCCGCTCCACTTCCCCTCTACACA...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTTCCTGCTCACTGGGCTaGCGCTGGCCCGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSSCSLG*RWPGST
Trigger: GGTGGAGCCGGGCCAGCGCCAGCCCAGTGAGCAGGA...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCCATACAGGAGGGTGTaGGCTTCCGAGTGCACCGTC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPPYRRV*ASECTV
Trigger: GACGGTGCACTCGGAAGCCCACACCCTCCTGTATGG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCACTGCCCCCGGCATCTaGCAAGCCTCCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPITAPGI*QASQGG
Trigger: GCCACCCTGGGAGGCTTGCCAGATGCCGGGGGCAGT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTGCCATGAATGGGGAATaGACCAGCTCCTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCAMNGE*TSSSCQ
Trigger: TTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGC...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGGCCATGAATGGGGAATaGACCAGCTCCTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLAMNGE*TSSSCQ
Trigger: TTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGC...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCCCCCACTGATAACCTaGCCACTGAGCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGPPLIT*PLSSPC
Trigger: ACATGGACTGCTCAGTGGCCAGGTTATCAGTGGGGG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGATGCTCAATCGTATGTaGCGTGTGAGAACACTTTGG +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRMLNRM*RVRTLW
Trigger: CCAAAGTGTTCTCACACGTCACATACGATTGAGCAT...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAAAGCCCAGTGACCAAGTaGATCCAAGAATCTGCACTC +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTRESPVTK*IQESAL
Trigger: GAGTGCAGATTCTTGGATTCACTTGGTCACTGGGCT...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCTCTGCAGATGAACGTTaGACCATGATGCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVSADER*TMMLLP
Trigger: GGGGAGAAGCATCATGGTTCAACGTTCATCTGCAGA...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTGTTGTTGCTTGATGTaGTCGTGGAGCTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCCCCLM*SWSCAS
Trigger: CGAGGCGCAGCTCCACGAGCACATCAAGCAACAACA...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACTTCTGCTCCCGGTGCTaGTTCTCCAGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYFCSRC*FSSSCS
Trigger: GGAGCAGGAGCTGGAGAAGCAGCACCGGGAGCAGAA...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGAGTCTCTCGGCGTCCTaGTGGCCCGCCGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKSLSAS*WPAVPA
Trigger: TGCGGGCACGGCGGGCCAGCAGGACGCCGAGAGACT...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCTTGTTCATCTGCAGTTaGTGCTGCTGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACLFICS*CCWNCC
Trigger: GCAGCAGTTCCAGCAGCAGCAACTGCAGATGAACAA...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATGCGTGCGCCTCCTTCTaGCCCGGCAGCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDACASF*PGSRSR
Trigger: CCTGGACCGGCTGCCGGGGCAGAAGGAGGCGCACGC...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCTGCACGCCGGCCTGTaGGTGCGCCTCCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRLHAGL*VRLLLP
Trigger: GGGCAGAAGGAGGCGCACGCACAGGCCGGCGTGCAG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTGCTACTCCCGCAGGTaGACTGGTGCTTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCCYSRR*TGASAS
Trigger: TGATGCTGAAGCACCAGTGCACCTGCGGGAGTAGCA...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACGTGTGGGCTTCCGAGTaGACCGTCTGTAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYVWASE*TVCSSS
Trigger: GGAGGAGCTACAGACGGTGCACTCGGAAGCCCACAC...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCTGCAGAAGCTTGGCTaGCACGGCCACGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPLQKLG*HGHGVE
Trigger: TTCAACTCCGTGGCCGTGGCAGCCAAGCTTCTGCAG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCCCGCTGTGGAGGTTGTaGGCTGCAGGCAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIPLWRL*AAGSAS
Trigger: ACTGGCGCTGCCTGCAGCGCACAACCTCCACAGCGG...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGACGGCTGGTGCCCGTaGTTGAGGCGTCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSDGWCP*LRRQAS
Trigger: GCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTC...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAACACAAGCCATCCATTTaGAGGGACCTTCGCAATCTG +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTREHKPSI*RDLRNL
Trigger: CAGATTGCGAAGGTCCCTGCAAATGGATGGCTTGTG...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCAAGACCGTTCTGCCTaGTCTCAAACCACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLQDRSA*SQTTVS
Trigger: TGAGACAGTGGTTTGAGAGCAGGCAGAACGGTCTTG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCCCCTGCCAGGCCTTTaGAGAGGGCGTCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYPLPGL*RGRLHL
Trigger: CAAATGGAGACGCCCTCTGCAAAGGCCTGGCAGGGG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCTCTCCAGCTTCCGCTaGTGTTCCAGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYLSSFR*CSSSSC
Trigger: GCAGGAGCTGCTGGAACACCAGCGGAAGCTGGAGAG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTAGTAGCGAGGGTCGCTaGAAATGCAGTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCSSEGR*KCSGSD
Trigger: ATCTGAACCACTGCATTTCCAGCGACCCTCGCTACT...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTAGGTGCTGCAGAGCCTaGGCGTTCTGGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSRCCRA*AFWGSG
Trigger: CCCGCTGCCCCAGAACGCCCAGGCTCTGCAGCACCT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGTCCGTCTCCTCCGGGTaGCTCTCCGGCTGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRSVSSG*LSGCRA
Trigger: AGCCCGGCAGCCGGAGAGCCACCCGGAGGAGACGGA...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTATGGCGGTCAGGTCGTaGCCTCCCTCGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSMAVRS*PPSRAR
Trigger: CCTGGCCCTCGAGGGAGGCCACGACCTGACCGCCAT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGGGACAGCGTTTGCATTaGGTCTTTGCTGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRGQRLH*VFAVKP
Trigger: AGGTTTTACAGCAAAGACCCAATGCAAACGCTGTCC...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCGAGAACGCCCCGCTGTaGAGGTTGTGCGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIENAPL*RLCAAG
Trigger: GCCTGCAGCGCACAACCTCCACAGCGGGGCGTTCTC...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCCGAGACCTGTGGGCCTaGGCGGCAGAAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIRDLWA*AAERLP
Trigger: GGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCG...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTAAAGACTGGCTGTCCTaGTCAGGCAATCATACCCTC +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCKDWLS*SGNHTL
Trigger: GAGGGTATGATTGCCTGACCAGGACAGCCAGTCTTT...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTCTCCTCTTGCCAATCTaGGCTTCAGAGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCLLLPI*ASEQRV
Trigger: CACTCTTTGCTCTGAAGCCCAGATTGGCAAGAGGAG...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCAGACCATTACGAAATaGTCCTTCCCCTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRQTITK*SFPLQT
Trigger: TGTTTGCAAGGGGAAGGACCATTTCGTAATGGTCTG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp TGCAGGTTCACCAGGCAACAAGGGTCCCTGGGTTCCTaGCAGCCACAGGCTCCAAAATCCAGGGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CRFTRQQGSLGS*QPQAPKSRAGH
Trigger: GTGGCCAGCCCTGGATTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACCCTTGTTGCCTGGTGAACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGGAGGGCGGGAAGGGTaGGTCTCTCGGCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKGGREG*VSRRPA
Trigger: AGCAGGACGCCGAGAGACTCACCCTTCCCGCCCTCC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTTCGTTCTCGCAAGTCTaGGCCTCGATCAGAGAACGC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPSFSQV*ASIRER
Trigger: GCGTTCTCTGATCGAGGCTCAGACTTGCGAGAACGA...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCTGCCCCATGCATTGCTaGCATGCTCAAAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVCPMHC*HAQKVF
Trigger: AAAGACCTTTTGAGCATGTCAGCAATGCATGGGGCA...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCATTAAATTACAGAGGTaGATGGTGGCCACGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVIKLQR*MVATAS
Trigger: ACTGGCCGTGGCCACCATTCACCTCTGTAATTTAAT...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGAAGTGGAAAGAAGGTaGCCGTCAGAAGAGGATATC +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVEVERR*PSEEDI
Trigger: GATATCCTCTTCTGACGGTCACCTTCTTTCCACTTC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTGCCGAGGGGGCCACTTaGAGAGGCAGCGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCAEGAT*RGSAVA
Trigger: GGCCACGGCGCTGCCTCTGCAAGTGGCCCCCTCGGC...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATAGCTCCTGCTGCAGCTaGTGCTCCCGCAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDSSCCS*CSRRAG
Trigger: GCCGGCCCTGCGGGAGCAGCAGCTGCAGCAGGAGCT...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGAGCTGCGCCTCGTGCTaGCGGGAGAGCTGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRSCASC*RESCSC
Trigger: GCACGAGCAGCTCTCCCGGCAGCACGAGGCGCAGCT...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTGAGGGTCGCTGGAAATaGAGTGGTTCAGATTCCGGT +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCEGRWK*SGSDSG
Trigger: ACCGGAATCTGAACCACTGCATTTCCAGCGACCCTC...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCTTTCGGCCACTTTCTaGTTTAGCCTGGACCGTAAT +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLLSATF*FSLDRN
Trigger: ATTACGGTCCAGGCTAAAGCAGAAAGTGGCCGAAAG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTCCAGTAAGACCATGTaGTGCAGAAGAGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCSSKTM*CRRGLC
Trigger: GCACAGCCCTCTTCTGCAGCACATGGTCTTACTGGA...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACTGCGTGGAGGGGCAGTaGTCCCAGGCCTGTGACGAG +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDCVEGQ*SQACDE
Trigger: CTCGTCACAGGCCTGGGAGCACTGCCCCTCCACGCA...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345617.7
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGTGCTGCTGGAACTGCTaGTTGTGTTTCTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLCCWNC*LCFSRN
Trigger: GTTTCTGGAGAAACACAAGCAGCAGTTCCAGCAGCA...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGATCTGCAGTTGCTGCTaGTGGAACTGCTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGICSCC*WNCCLC
Trigger: ACACAAGCAGCAGTTCCAGCAGCAGCAACTGCAGAT...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCCTGAAGAGCAGCTCCTaGTCACTGGGCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPILKSSS*SLGWRW
Trigger: CCAGCGCCAGCCCAGTGAGCAGGAGCTGCTCTTCAG...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCGAAGGACACGGGGATaGCGGCGGCCTCCATGGACG +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRRRTRG*RRPPWT
Trigger: CGTCCATGGAGGCCGCCGGCATCCCCGTGTCCTTCG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACTGGATCCTCCCGGCGTaGTCGGGGTGGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDWILPA*SGWLLL
Trigger: TAGCAGCAGCCACCCCGAGCACGCCGGGAGGATCCA...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCCTCCAGGGTGGCCTTaGGTCCGCGGATGCACTCGC +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRPPGWP*VRGCTR
Trigger: GCGAGTGCATCCGCGGACGCAAGGCCACCCTGGAGG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACACGCTCAACCTCTGCTaGAGAAGCTTGGCTGCCACG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYTLNLC*RSLAAT
Trigger: CGTGGCAGCCAAGCTTCTGCAGCAGAGGTTGAGCGT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACGGACCCGCCAGAGTGTaGTTGGCTTCCGCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDGPARV*LASACP
Trigger: CGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCC...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTGTAACACTGCAAGTGTaGCTACCACATGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCVTLQV*LPHASR
Trigger: TCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTAC...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCCTGCCACTGCTCTGTaGCATGAATGGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPPATAL*HEWGMD
Trigger: GTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGTGCCCCCAAGGCCTTTaGAAAGGAAGAAAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLCPQGL*KGRKRL
Trigger: TAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCAAAGGGATATAAAGTaGTCGCTTGCTGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLQRDIK*SLADSQ
Trigger: CTGGGAGTCAGCAAGCGAGCACTTTATATCCCTTTG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTAAGTCAACACAGCTGTaGGGAAAAGGGGACTCTTTC +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCKSTQL*GKGDSF
Trigger: GAAAGAGTCCCCTTTTCCGCACAGCTGTGTTGACTT...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATCTCCGCCGGGATGCTaGGGACGGCGGGCGCGATAC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTSPPGC*GRRARY
Trigger: GTATCGCGCCCGCCGTCCCCAGCATCCCGGCGGAGA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAAGAGCCTGGGCGTTCTaGGGCAGCGGGGCCGACTGG +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTRAWAF*GSGADW
Trigger: CCAGTCGGCCCCGCTGCCCCAGAACGCCCAGGCTCT...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACACCGGCGTGCTCGGGGTaGCTGCTGCTACTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTPACSG*LLLLPQ
Trigger: CTGCGGGAGTAGCAGCAGCCACCCCGAGCACGCCGG...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCATGGGCTCCTCATCTaGTCTCTTTTCGGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPHGLLI*SLFGGL
Trigger: AAGCCCGCCGAAAAGAGACCAGATGAGGAGCCCATG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACGCGGCTCCTCTTCCATaGGCTCCTCATCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYAAPLP*APHLVS
Trigger: AGAGACCAGATGAGGAGCCCATGGAAGAGGAGCCGC...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTATGTGCATGAAGGCTTaGAGACGGGAGCGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCMCMKA*RRERFC
Trigger: ACAGAACCGCTCCCGTCTCCAAGCCTTCATGCACAT...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGTGGAAAAACCCAAGTaGGTAAAGAGCCCCACGTGT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGVEKPK*VKSPTC
Trigger: ACACGTGGGGCTCTTTACCCACTTGGGTTTTTCCAC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCTCCTCTTGCCAATCTaGGCTTCAGAGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGLLLPI*ASEQRV
Trigger: CACTCTTTGCTCTGAAGCCCAGATTGGCAAGAGGAG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGAACCCTCCCTGACGTaGTCCCGCCTGCAGACGCCG +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVEPSLT*SRLQTP
Trigger: CGGCGTCTGCAGGCGGGACCACGTCAGGGAGGGTTC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGACACGTTGCGTGATGTaGTACAGAATACTGGACTCC +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLTRCVM*YRILDS
Trigger: GGAGTCCAGTATTCTGTACCACATCACGCAACGTGT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAGGCAGGCCCAGCGTaGTGTTGGGCAAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVQAGPA*CWARMA
Trigger: CGCCATCCTTGCCCAACATCACGCTGGGCCTGCCTG...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGGAAAGTTTCTTGGCTaGGCTTCAAGACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGGKFLG*ASRQRQ
Trigger: CTGTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCAATGTGTTGGCGATCTaGAATCTAGCCAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACNVLAI*NLANLE
Trigger: CTCCAGATTGGCTAGATTTCAGATCGCCAACACATT...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGGTTACCAGTAAAACGTaGCTGTCAGTTACTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SARRRRLSRVPCEAATPRVTSKT*LSVTVE
Trigger: TTCAACAGTAACTGACAGTCACGTTTTACTGGTAAC...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCAAAACTGAAACACCTTaGCAAAGTGGCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVKTETP*QSGPPE
Trigger: TTCTGGAGGGCCACTTTGTCAAGGTGTTTCAGTTTT...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGATCAGCTTCGTTACAATaGAGAAATGGTTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGSASLQ*RNGFLS
Trigger: CGAAAGGAAACCATTTCTTCATTGTAACGAAGCTGA...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTATGCCAGAGACAAAGTaGGGCCGAGCTAAGAACACG +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPMPETK*GRAKNT
Trigger: CGTGTTCTTAGCTCGGCCTCACTTTGTCTCTGGCAT...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCAGTGCTCCCAGGCCTaGAAGATACCAGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYQCSQA*KIPVCD
Trigger: GTCACAGACTGGTATCTTTCAGGCCTGGGAGCACTG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGCCGAGGGGGCCACTTaGAGAGGCAGCGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCAEGAT*RGSAVA
Trigger: GGCCACGGCGCTGCCTCTGCAAGTGGCCCCCTCGGC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCTTTCGGCCACTTTCTaGTTTAGCCTGGACCGTAAT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGLSATF*FSLDRN
Trigger: ATTACGGTCCAGGCTAAAGCAGAAAGTGGCCGAAAG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTATGATCTTGTTCATCTaGAGTTGCTGCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCMILFI*SCCCWN
Trigger: GTTCCAGCAGCAGCAACTGCAGATGAACAAGATCAT...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGGGTGGCTCTCCGGCTaGCGGGCTGGCTCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCGWLSG*RAGSLG
Trigger: GCCAAGCGAGCCAGCCCGGCAGCCGGAGAGCCACCC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAGGCTCCTGCTTCACCTaGACGCCGGCCTGTGCGTGC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTGSCFT*TPACAC
Trigger: GCACGCACAGGCCGGCGTGCAGGTGAAGCAGGAGCC...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTTTACTGTCCAGTTTCTaGCGGTTGAGGGGGTTCGTG +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPLLSSF*RLRGFV
Trigger: CACGAACCCCCTCAACCGGCAGAAACTGGACAGTAA...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCGCCAGGCCCATCAGCTaGTTCGTCAGGTACCCGAAG +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIARPIS*FVRYPK
Trigger: CTTCGGGTACCTGACGAAGCAGCTGATGGGCCTGGC...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGTAACACTGCAAGTGTaGCTACCACATGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGVTLQV*LPHASR
Trigger: TCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTAC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCAAGACCGTTCTGCCTaGTCTCAAACCACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCQDRSA*SQTTVS
Trigger: TGAGACAGTGGTTTGAGAGCAGGCAGAACGGTCTTG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGAATTGTAAACCACAGTaGTCGCACAGTTCACGACTG +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLNCKPQ*SHSSRL
Trigger: CAGTCGTGAACTGTGCGAGCACTGTGGTTTACAATT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGAAAGTCCATCTGGATaGCTTTGGGAGCTCATTGCT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGESPSG*LWELIA
Trigger: AGCAATGAGCTCCCAAAGCCATCCAGATGGACTTTC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTGTTGTTGGGTGAGCTaGGTCCGGAGCCTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKCCWVS*VRSLGR
Trigger: GCGCCCCAGGCTCCGGACCCAGCTCACCCAACAACA...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGCCGCAGCTTGTGGATaGAGGGGGACACCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKAAACG*RGTPGL
Trigger: CAGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTGCTGCCGCAGCTTGTaGATGGAGGGGGACACCCGG +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVCCRSL*MEGDTR
Trigger: CCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAGCA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTCTGGGTCCGCCCCAGTaGGCGGTGCTGCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCLGPPQ*AVLPQL
Trigger: AAGCTGCGGCAGCACCGCCCACTGGGGCGGACCCAG...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGTAGCTCCTCCAGGGTaGCCTTGCGTCCGCGGATGC +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKVAPPG*PCVRGC
Trigger: GCATCCGCGGACGCAAGGCCACCCTGGAGGAGCTAC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGTAGCTCCTCCAGGGTaGCCTTGCGTCCGCGGATGC +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVVAPPG*PCVRGC
Trigger: GCATCCGCGGACGCAAGGCCACCCTGGAGGAGCTAC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTCTGCTGCAGAAGCTTaGCTGCCACGGCCACGGAGT +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPISAAEA*LPRPRS
Trigger: ACTCCGTGGCCGTGGCAGCCAAGCTTCTGCAGCAGA...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCAGGAGCCCCGCTGCCTaGGAAGAAGTTCCCATCGTC +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIRSPAA*EEVPIV
Trigger: GACGATGGGAACTTCTTCCCAGGCAGCGGGGCTCCT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCGCCAGTACTTGCTGTaGATCTCCATGACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCRQYLL*ISMTFS
Trigger: GGAGAAAGTCATGGAGATCCACAGCAAGTACTGGCG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACGTGGCTGTTGCACGCTaGGTGTCCCTGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDVAVAR*VSLGAP
Trigger: TGGAGCACCCAGGGACACCCAGCGTGCAACAGCCAC...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTAGGGTAGTTGCCCAGTaGCGAATGTGTTGGCGATCT +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPRVVAQ*RMCWRS
Trigger: AGATCGCCAACACATTCGCCACTGGGCAACTACCCT...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGAAAGACACAATCGTTaGTGTCACTCCGAAAAGACC +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACERHNR*CHSEKT
Trigger: GGTCTTTTCGGAGTGACACCAACGATTGTGTCTTTC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAACTGCCCCCGGCATCTaGCAAGCCTCCCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTTAPGI*QASQGG
Trigger: GCCACCCTGGGAGGCTTGCCAGATGCCGGGGGCAGT...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATGGAGCTGTTGTTGGGTaGGCTGGGTCCGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDGAVVG*AGSGAW
Trigger: CCAGGCTCCGGACCCAGCTCACCCAACAACAGCTCC...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTACCGTTCTCCGCGCTaGCGCTCCCGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVYRSPR*RSRSCC
Trigger: ACAACAGCTCCGGGAGCGTCAGCGCGGAGAACGGTA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATACACGAGGCCTGTCGTaGACCTCGGCTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDTRGLS*TSAWWG
Trigger: CCCCCACCAAGCCGAGGTTCACGACAGGCCTCGTGT...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTTCTTCCGATGGCTTTTaGGAAACTCAAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPSSDGF*ETQASS
Trigger: GGAGCTGGCTTGAGTTTCTCAAAAGCCATCGGAAGA...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGCTGGTGCCCGTGCTTaGGGCGTCAGGCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCAGARA*GVRPAR
Trigger: GCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCGAGAGCTGCTCGTGCTaGCTCTGGAACTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIESCSC*LWNSAM
Trigger: CATCGCTGAGTTCCAGAGGCAGCACGAGCAGCTCTC...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTCGTGCCACAAGTCTGTaGGCCAAACTCGTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSRATSL*AKLVSA
Trigger: GGCGGAGACGAGTTTGGCGCACAGACTTGTGGCACG...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGGCCGAGCCTTCTCGTaGCACAAGTCTGTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSGRAFS*HKSVRQ
Trigger: TTGGCGCACAGACTTGTGGCACGAGAAGGCTCGGCC...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGATGATCTTGTTCATCTaGAGTTGCTGCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGMILFI*SCCCWN
Trigger: GTTCCAGCAGCAGCAACTGCAGATGAACAAGATCAT...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCTGAAGAGCAGCTCCTaGTCACTGGGCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRLKSSS*SLGWRW
Trigger: CCAGCGCCAGCCCAGTGAGCAGGAGCTGCTCTTCAG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTCGAAGGACACGGGGATaGCGGCGGCCTCCATGGACG +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCRRTRG*RRPPWT
Trigger: CGTCCATGGAGGCCGCCGGCATCCCCGTGTCCTTCG...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATGCTCGGGGTGGCTGCTaGTACTCCCGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDARGGC*YSRRCT
Trigger: AGTGCACCTGCGGGAGTAGCAGCAGCCACCCCGAGC...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATGGATCCTCCCGGCGTaGTCGGGGTGGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTWILPA*SGWLLL
Trigger: TAGCAGCAGCCACCCCGAGCACGCCGGGAGGATCCA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACACCGCTGTGGAGGTTGTaGGCTGCAGGCAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTPLWRL*AAGSAS
Trigger: ACTGGCGCTGCCTGCAGCGCACAACCTCCACAGCGG...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATGCCCAGGCGTGCATGTaGGTCTCGAGACCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDAQACM*VSRPVG
Trigger: GCCCACAGGTCTCGAGACGCACATGCACGCCTGGGC...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTGCCACGCCCAGGCGTaGATGTGCGTCTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVCHAQA*MCVSRP
Trigger: AGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGGAGATGACGGCTGGTaGCCGTGCTTGAGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKGDDGW*PCLRRQ
Trigger: CTGACGCCTCAAGCACGGGCACCAGCCGTCATCTCC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAAACTGGTGGCTTCATGTaGTGGAAAATAAGTTACCAG +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTRETGGFM*WKISYQ
Trigger: CTGGTAACTTATTTTCCAGCACATGAAGCCACCAGT...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAATACAATATAAAGTCATaGCGGTCGTACAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTREYNIKS*RSYSPC
Trigger: GCATGGACTGTACGACCGGCATGACTTTATATTGTA...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTGCCGGCGGCCTCCATaGACGCCTGGTAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVCRRPP*TPGSSS
Trigger: TGAGGAACTACCAGGCGTCCATGGAGGCCGCCGGCA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACCTCCCGCAGGTGCACTaGTGCTTCAGCATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDLPQVH*CFSISV
Trigger: CACGCTGATGCTGAAGCACCAGTGCACCTGCGGGAG...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGACTCGCATCTTCCGATaGCTTTTGAGAAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGTRIFR*LLRNSS
Trigger: GCTTGAGTTTCTCAAAAGCCATCGGAAGATGCGAGT...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACACTGCCAGGCTCGGCTaGCCACAGGAAACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDTARLG*PQETVP
Trigger: TGGGACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGT...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATCCCGGAGATGACGGCTaGTGCCCGTGCTTGAGGCGT +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDPGDDG*CPCLRR
Trigger: ACGCCTCAAGCACGGGCACCAGCCGTCATCTCCGGG...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGGCAACAAGGGTCCCTaGGTTCCTTGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSGNKGP*VPCSHR
Trigger: CCTGTGGCTGCAAGGAACCCAGGGACCCTTGTTGCC...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTAAAAAGAGTAAAGACTaGCTGTCCTGGTCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: QASSRCQHCQARLATGNCKKSKD*LSWSGN
Trigger: ATTGCCTGACCAGGACAGCCAGTCTTTACTCTTTTT...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCTACAAAAAGAAGAATaGAATGAGCACGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLLQKEE*NEHVAV
Trigger: CACAGCCACGTGCTCATTCCATTCTTCTTTTTGTAG...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp CGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTaGCTGTGGAGAAGAGCCGAGTGTGTCTTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RRGRSSAICPGR*LWRRAECVFKE
Trigger: TTCTTTGAAGACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAGCTGGTGCCCGTGCTTaGGGCGTCAGGCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLAGARA*GVRPAR
Trigger: GCGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGC...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGTTAGAATTCTATCCTaGCGATGTGGTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGVRILS*RCGQRS
Trigger: ACTTCTCTGACCACATCGTCAGGATAGAATTCTAAC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCACGACTGCTTAAAGTaGAATCTTAGCCATACATCA +
Preference number: 4 (lower is better)
Translates to: VPPADAEADPLPSALDACHDCLK*NLSHTS
Trigger: TGATGTATGGCTAAGATTTCACTTTAAGCAGTCGTG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCTCAGCTTCGTTACAATaGAGAAATGGTTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVSASLQ*RNGFLS
Trigger: CGAAAGGAAACCATTTCTTCATTGTAACGAAGCTGA...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACAGCATCTCCTGTTGTTaGTTGATGTGCTCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYSISCC*LMCSWS
Trigger: GCTCCACGAGCACATCAAGCAACAACAGGAGATGCT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTTCCTGCTCCTGGCGGTaGCTCTCCAGCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCSCSWR*LSSFRW
Trigger: CCAGCGGAAGCTGGAGAGGCACCGCCAGGAGCAGGA...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTTCTGCTCCCGGTGCTaGTTCTCCAGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVFCSRC*FSSSCS
Trigger: GGAGCAGGAGCTGGAGAAGCAGCACCGGGAGCAGAA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCAGCTGCTGCAGCTTCTaGTCCCGGTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVSCCSF*SRCCFS
Trigger: GGAGAAGCAGCACCGGGAGCAGAAGCTGCAGCAGCT...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGAAAAGGGAGAGCCTCTaGTGGAGGGCGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKKRESL*WRAGRV
Trigger: CACCCTTCCCGCCCTCCAGCAGAGGCTCTCCCTTTT...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTCGTGCTCGGGGTGGCTaGTGCTACTCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCRARGG*CYSRRC
Trigger: GCACCTGCGGGAGTAGCAGCAGCCACCCCGAGCACG...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACCATCAGGAGCCCCGCTaGCTGGGAAGAAGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDHQEPR*LGRSSH
Trigger: ATGGGAACTTCTTCCCAGGCAGCGGGGCTCCTGATG...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACAACCCTCCCTGCCCTTaGCACGGAGGGGAAAAACAC +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDNPPCP*HGGEKH
Trigger: GTGTTTTTCCCCTCCGTGGCAAGGGCAGGGAGGGTT...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACAGATCCTCTGCCATCTaGCCTGGACGCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDRSSAI*PGRLLW
Trigger: CCACAGCAAGCGTCCAGGGCAGATGGCAGAGGATCT...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATCCAGCTCCTGCTCCTaGCGGTGCCTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTSSSCS*RCLSSF
Trigger: GAAGCTGGAGAGGCACCGCCAGGAGCAGGAGCTGGA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTCACTCCGCTCTGGGGTaGAGAACTCTGGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSHSALG*RTLVKG
Trigger: TCCCTTGACCAGAGTTCTCCACCCCAGAGCGGAGTG...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCCATACAGGAGGGTGTaGGCTTCCGAGTGCACCGTC +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRPYRRV*ASECTV
Trigger: GACGGTGCACTCGGAAGCCCACACCCTCCTGTATGG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTAGCCCCCAAGAGGGGTaGGGTGGCCCTCCACGGCAT +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCSPQEG*GGPPRH
Trigger: ATGCCGTGGAGGGCCACCCCACCCCTCTTGGGGGCT...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACGCGGCTCCTCTTCCATaGGCTCCTCATCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDAAPLP*APHLVS
Trigger: AGAGACCAGATGAGGAGCCCATGGAAGAGGAGCCGC...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACCAGAAAGGCTTCCCGTaGCTGTTGCACGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDQKGFP*LLHAGC
Trigger: ACACCCAGCGTGCAACAGCCACGGGAAGCCTTTCTG...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGCCAGGGCTGGCCACGTaGCTGCAGTGGAAAAACCCA +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKPGLAT*LQWKNP
Trigger: TGGGTTTTTCCACTGCAGCCACGTGGCCAGCCCTGG...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGACCCAATATACACTTTaGAATGAAACTGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLTQYTL*NETGGF
Trigger: GAAGCCACCAGTTTCATTCCAAAGTGTATATTGGGT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTCCGAAACTCGGCTCTaGGTCCCTCCTGAGCACGGT +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVSETRL*VPPEHG
Trigger: ACCGTGCTCAGGAGGGACCCAGAGCCGAGTTTCGGA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCCGCTCGCCTGGCCCGTaGAAGGAGATAAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIRSPGP*KEIKGN
Trigger: GTTTCCTTTTATCTCCTTCCACGGGCCAGGCGAGCG...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAGTTACAATGAAGAAATaGTTTCCTTTCGATGCAAAG +
Preference number: 4 (lower is better)
Translates to: RRQASSRCQHCQARLATGVTMKK*FPFDAK
Trigger: CTTTGCATCGAAAGGAAACCATTTCTTCATTGTAAC...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp GCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTaGCCAATCTGGGCTTCAGAGCAAAGAGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ALCHEWGMDQLL*PIWASEQRVAT
Trigger: GGTGGCCACTCTTTGCTCTGAAGCCCAGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAATCTGAAAATAGAATCTaGCAGCAACAATTCTGTACG +
Preference number: 4 (lower is better)
Translates to: VPGCSKRAPRWDAGVTRESENRI*QQQFCT
Trigger: CGTACAGAATTGTTGCTGTCAGATTCTATTTTCAGA...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACATTAAATTACAGAGGTaGATGGTGGCCACGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYIKLQR*MVATAS
Trigger: ACTGGCCGTGGCCACCATTCACCTCTGTAATTTAAT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATTGGCCACATCCACCGTaGTGGGCATGTGGTTCACGC +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDWPHPP*WACGSR
Trigger: GCGTGAACCACATGCCCAGCACGGTGGATGTGGCCA...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTGGATCTGCTGCTTCTaGTTGAGCGCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVWICCF*LSARSS
Trigger: GGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGATCCA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGAGAGCTGCTCGTGCTaGCTCTGGAACTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVESCSC*LWNSAM
Trigger: CATCGCTGAGTTCCAGAGGCAGCACGAGCAGCTCTC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTTGCTGCCGGGAGAGCTaGTCGTGCTGCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCCCRES*SCCLWN
Trigger: GTTCCAGAGGCAGCACGAGCAGCTCTCCCGGCAGCA...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACTCCTTGTTCTTGAGCTaGTGCAGCTTCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDSLFLS*CSFCSR
Trigger: CCGGGAGCAGAAGCTGCAGCAGCTCAAGAACAAGGA...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAGCTTGTGCCGGCGGCTaGTCCAGTAAGACCATGTGC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTACAGG*SSKTMC
Trigger: GCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGC...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAACCAACCAAGGACTGTaGGTGGAGGGGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTTNQGL*VEGQCS
Trigger: GGAGCACTGCCCCTCCACGCACAGTCCTTGGTTGGT...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAGGCTCCTGCTTCACCTaGACGCCGGCCTGTGCGTGC +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLGSCFT*TPACAC
Trigger: GCACGCACAGGCCGGCGTGCAGGTGAAGCAGGAGCC...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTCCAGCAGGAGGGCTTaGTGTCTGAAGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKSSRRA*CLKSSS
Trigger: GGAGCTGCTCTTCAGACAGCAAGCCCTCCTGCTGGA...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCCGCAGGTGCACTGGTaGTTCAGCATCAGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVPQVHW*FSISVS
Trigger: TGACACGCTGATGCTGAAGCACCAGTGCACCTGCGG...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCACAGCCAGGCGGGCTaGCCCCGCCGAGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKHSQAG*PRRVHL
Trigger: GAGGTGCACTCGGCGGGGGCAGCCCGCCTGGCTGTG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCACAGCCAGGCGGGCTaGCCCCGCCGAGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSHSQAG*PRRVHL
Trigger: GAGGTGCACTCGGCGGGGGCAGCCCGCCTGGCTGTG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACACGACCAGATGGAGATaGTCAATCGTATGTGACGTG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYTTRWR*SIVCDV
Trigger: CACGTCACATACGATTGAGCATCTCCATCTGGTCGT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCTGACAGATGAAACGTaGCTCCCCCTGCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVLTDET*LPLPGL
Trigger: AAGGCCTGGCAGGGGGAGGCACGTTTCATCTGTCAG...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGCTGACTCCCAGCCAGTaGCCCCAAGGCCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKLTPSQ*PQGLCK
Trigger: TTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGTCAG...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCTGCCGAGTTTGGCGTaGAAAATCTGTATACAATAT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGLPSLA*KICIQY
Trigger: ATATTGTATACAGATTTTGCACGCCAAACTCGGCAG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGAGCAGCTCCACTGGCTaGTCTCGGCCAGAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKSSSTG*SRPESP
Trigger: TGGACTTTCTGGCCGAGACCAGCCAGTGGAGCTGCT...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGTCGACACTCCGCTCTaGGGTGGAGAACTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVVDTPL*GGELWS
Trigger: TGACCAGAGTTCTCCACCCCAGAGCGGAGTGTCGAC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCTTTCTGCTTTAGCCTaGACCGTAATTTCAGATTCG +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCLSALA*TVISDS
Trigger: CGAATCTGAAATTACGGTCCAGGCTAAAGCAGAAAG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACGGCTCCACCTCCCGTaGGGGCTCTGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLRLHLP*GLCLFL
Trigger: GAGGAAGAGGCAGAGCCCCCACGGGAGGTGGAGCCG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTAGTAGCAAAAGCCCATaGGCGTGCTCTCCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSSSKSP*ACSPPH
Trigger: ATGCGGAGGAGAGCACGCCCATGGGCTTTTGCTACT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGTCTATCCTGACGATGTaGTCAGAGAAGTTTAAACAT +
Preference number: 4 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLSILTM*SEKFKH
Trigger: ATGTTTAAACTTCTCTGACCACATCGTCAGGATAGA...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCTCTGCCATCTGCCCTaGACGCTTGCTGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRLCHLP*TLAVEK
Trigger: CTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATCGCCAAGAGGCCCAGTaGCGTCATCAGGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDRQEAQ*RHQGFP
Trigger: AGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCG...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTCGGGCGGCGCTCGCCTaGCCCGTGGAAGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCRAALA*PVEGDK
Trigger: TTTATCTCCTTCCACGGGCCAGGCGAGCGCCGCCCG...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATACAGAGGTGAATGGTaGCCACGGCCAGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTYRGEW*PRPVRS
Trigger: GCTGCGCACTGGCCGTGGCCACCATTCACCTCTGTA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACACACGTTGCGTGATGTaGTACAGAATACTGGACTCC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYTRCVM*YRILDS
Trigger: GGAGTCCAGTATTCTGTACCACATCACGCAACGTGT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp CCACGGTGGGACGCAGGCGTGACACGGGAAAGTTTCTaGGCTGAGCTTCAAGACAGAGACAGACAGACAAGA +
Preference number: 4 (lower is better)
Translates to: PRWDAGVTRESF*AELQDRDRQTR
Trigger: TCTTGTCTGTCTGTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGGCGCCTTCTTTTTATTaGGGACAAATTCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGAPSFY*GQILVT
Trigger: AGTTACAAGAATTTGTCCTCAATAAAAAGAAGGCGC...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCCCTGGCCCCGGAGATaGCGGCTGGTGCCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKPWPRR*RLVPVL
Trigger: AAGCACGGGCACCAGCCGTCATCTCCGGGGCCAGGG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCCCATCAGCAGCCCAGTaGCCAAGTGAATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIPSAAQ*PSESKN
Trigger: ATTCTTGGATTCACTTGGTCACTGGGCTGCTGATGG...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGAAGCTGGAGTGAGCTaGCAGATGAAACGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPREAGVS*QMKRAS
Trigger: GGAGGCACGTTTCATCTGTCAGCTCACTCCAGCTTC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATGGATCTGCTGCTTCTaGTTGAGCGCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTWICCF*LSARSS
Trigger: GGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGATCCA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTTGTTCTTGAGCTGCTaGAGCTTCTGCTCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVLFLSC*SFCSRC
Trigger: GCACCGGGAGCAGAAGCTGCAGCAGCTCAAGAACAA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACGAGGGTCGCTGGAAATaGAGTGGTTCAGATTCCGGT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDEGRWK*SGSDSG
Trigger: ACCGGAATCTGAACCACTGCATTTCCAGCGACCCTC...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTTGCTGGATGACCAGGTaGTGCAGAGCCTGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCCWMTR*CRAWAF
Trigger: GAACGCCCAGGCTCTGCAGCACCTGGTCATCCAGCA...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACTTACTGTCCAGTTTCTaGCGGTTGAGGGGGTTCGTG +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDLLSSF*RLRGFV
Trigger: CACGAACCCCCTCAACCGGCAGAAACTGGACAGTAA...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAGTCCCGTTTCCATGGTaGACGTCCCAGTCCACGATG +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTVPFPW*TSQSTM
Trigger: CATCGTGGACTGGGACGTGCACCATGGAAACGGGAC...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCAGACTTTTAATCAATaGCAGAGACAAAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPQTFNQ*QRQSEA
Trigger: GGCCTCACTTTGTCTCTGGCATTGATTAAAAGTCTG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCACAAGATAACACGTTaGGTGATGTGGTACAGAATA +
Preference number: 4 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCHKITR*VMWYRI
Trigger: TATTCTGTACCACATCACGCAACGTGTTATCTTGTG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGATTCAGCAGCTCCACTaGCTGGTCTCGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRIQQLH*LVSARK
Trigger: CTTTCTGGCCGAGACCAGCCAGTGGAGCTGCTGAAT...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTGGCAGTGAGAACTGGTaGTCCAGGCGCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCGSENW*SRRRSM
Trigger: CATGGACCTGCGCCTGGACCACCAGTTCTCACTGCC...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTCCAGCTCCTGCTCCTaGCGGTGCCTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCSSSCS*RCLSSF
Trigger: GAAGCTGGAGAGGCACCGCCAGGAGCAGGAGCTGGA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCAGTAGCGAGGGTCGCTaGAAATGCAGTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPISSEGR*KCSGSD
Trigger: ATCTGAACCACTGCATTTCCAGCGACCCTCGCTACT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCTGGGTCCGCCCCAGTaGGCGGTGCTGCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKLGPPQ*AVLPQL
Trigger: AAGCTGCGGCAGCACCGCCCACTGGGGCGGACCCAG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTAGAGCCTGGGCGTTCTaGGGCAGCGGGGCCGACTGG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSRAWAF*GSGADW
Trigger: CCAGTCGGCCCCGCTGCCCCAGAACGCCCAGGCTCT...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGTCCGTCTCCTCCGGGTaGCTCTCCGGCTGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQSVSSG*LSGCRA
Trigger: AGCCCGGCAGCCGGAGAGCCACCCGGAGGAGACGGA...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTGGTACCCGAAGCATCTaGCGGAGAGGTTGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCGTRSI*RRGCSP
Trigger: GGGGCTACAACCTCTCCGCCAGATGCTTCGGGTACC...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTATGTGCATGAAGGCTTaGAGACGGGAGCGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSMCMKA*RRERFC
Trigger: ACAGAACCGCTCCCGTCTCCAAGCCTTCATGCACAT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTAACACCTTGACAAAGTaGCCCTCCAGAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSNTLTK*PSRTRA
Trigger: GGCTCTGGTTCTGGAGGGCCACTTTGTCAAGGTGTT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCAAAGCTGCCGAGTTTaGCGTGCAAAATCTGTATAC +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYQSCRV*RAKSVY
Trigger: GTATACAGATTTTGCACGCCAAACTCGGCAGCTTTG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGTTACAATGAAGAAATaGTTTCCTTTCGATGCAAAG +
Preference number: 4 (lower is better)
Translates to: ASLAGPARVCLASACPCVVTMKK*FPFDAK
Trigger: CTTTGCATCGAAAGGAAACCATTTCTTCATTGTAAC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTTCTCCAGAAACTGCTaGTGCTGCTGCTGGATGACC +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVFSRNC*CCCWMT
Trigger: GGTCATCCAGCAGCAGCATCAGCAGTTTCTGGAGAA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACTGCTGTGGATCTCCATaGCTTTCTCCATGGAACGGA +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDCCGSP*LSPWNG
Trigger: TCCGTTCCATGGAGAAAGTCATGGAGATCCACAGCA...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACCCATCAGCAGCCCAGTaGCCAAGTGAATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDPSAAQ*PSESKN
Trigger: ATTCTTGGATTCACTTGGTCACTGGGCTGCTGATGG...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTCAGCGATGAGGATCTaGCTCTGGATCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVSAMRI*LWICCF
Trigger: GAAGCAGCAGATCCAGAGGCAGATCCTCATCGCTGA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTAGCTGCGCCTCGTGCTaGCGGGAGAGCTGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSSCASC*RESCSC
Trigger: GCACGAGCAGCTCTCCCGGCAGCACGAGGCGCAGCT...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTGGAGCTGCGCCTCGTaGTGCCGGGAGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSWSCAS*CRESCS
Trigger: CGAGCAGCTCTCCCGGCAGCACGAGGCGCAGCTCCA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACAGCATCTCCTGTTGTTaGTTGATGTGCTCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDSISCC*LMCSWS
Trigger: GCTCCACGAGCACATCAAGCAACAACAGGAGATGCT...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATCCTTGTTCTTGAGCTaGTGCAGCTTCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTSLFLS*CSFCSR
Trigger: CCGGGAGCAGAAGCTGCAGCAGCTCAAGAACAAGGA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTTGCGTAACAGGGGGCTaGTCCGTCTTTCGGCCACTT +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCCVTGG*SVFRPL
Trigger: AAGTGGCCGAAAGACGGAGCAGCCCCCTGTTACGCA...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACTGGCCCGTCTTTCCTaGGTAACAGGGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLLARLS*VTGGCS
Trigger: GGAGCAGCCCCCTGTTACGCAGGAAAGACGGGCCAG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTGCTGGATGACCAGGTaGTGCAGAGCCTGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCCWMTR*CRAWAF
Trigger: GAACGCCCAGGCTCTGCAGCACCTGGTCATCCAGCA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTATGGTGGATCCGCTGCTaGTCCAGCAGGAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLWWIRC*SSRRAC
Trigger: GCAAGCCCTCCTGCTGGAGCAGCAGCGGATCCACCA...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTAAAAGCCCATGGGCGTaGTCTCCTCCGCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCKSPWA*SPPHGV
Trigger: GACACCATGCGGAGGAGAGCACGCCCATGGGCTTTT...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTCATCAGGAGCCCCGCTaGCTGGGAAGAAGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCHQEPR*LGRSSH
Trigger: ATGGGAACTTCTTCCCAGGCAGCGGGGCTCCTGATG...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGCCAGGCCCATCAGCTaGTTCGTCAGGTACCCGAAG +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCARPIS*FVRYPK
Trigger: CTTCGGGTACCTGACGAAGCAGCTGATGGGCCTGGC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACCAAGGCAGAAACACATaGTTCCGAGGCGTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDQGRNT*FRGVAN
Trigger: ATTTGCGACGCCTCGGAAGCATGTGTTTCTGCCTTG...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGCTTCCCGTGGCTGTTaGACGCTGGGTGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEASRGC*TLGVPG
Trigger: CCCAGGGACACCCAGCGTGCAACAGCCACGGGAAGC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTCGCGGTGCCAGCACTaGCAGGCTCGGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSSRCQH*QARLAT
Trigger: TGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGGACGGCTGGTGCCCGTaGTTGAGGCGTCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKDGWCP*LRRQAS
Trigger: GCTGGCCTGACGCCTCAAGCACGGGCACCAGCCGTC...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAGGAGATGACGGCTGGTaGCCGTGCTTGAGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLGDDGW*PCLRRQ
Trigger: CTGACGCCTCAAGCACGGGCACCAGCCGTCATCTCC...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTTCATTAATGCTGACTaGCCCCGGCATCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKFINAD*PRHLAS
Trigger: GCTTGCCAGATGCCGGGGGCAGTCAGCATTAATGAA...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGTCCCAAGACCGTTCTaGCTGCTCTCAAACCACTGT +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVVPRPF*LLSNHC
Trigger: ACAGTGGTTTGAGAGCAGGCAGAACGGTCTTGGGAC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACGGGACGGTGAGGGCTaGGTCACAGACGTTCAAGCG +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLRDGEG*VTDVQA
Trigger: CGCTTGAACGTCTGTGACCCAGCCCTCACCGTCCCG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATATTCAGCAGCTCCACTaGCTGGTCTCGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDIQQLH*LVSARK
Trigger: CTTTCTGGCCGAGACCAGCCAGTGGAGCTGCTGAAT...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATTGCTCGTGCTGCCTCTaGAACTCAGCGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDCSCCL*NSAMRI
Trigger: GATCCTCATCGCTGAGTTCCAGAGGCAGCACGAGCA...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTGCTTGATGTGCTCGTaGAGCTGCGCCTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCCLMCS*SCASCC
Trigger: GCAGCACGAGGCGCAGCTCCACGAGCACATCAAGCA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTGTTGTTGGGTGAGCTaGGTCCGGAGCCTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGECCWVS*VRSLGR
Trigger: GCGCCCCAGGCTCCGGACCCAGCTCACCCAACAACA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGAGGTGCTGCAGAGCCTaGGCGTTCTGGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKRCCRA*AFWGSG
Trigger: CCCGCTGCCCCAGAACGCCCAGGCTCTGCAGCACCT...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCTCCGGCTGCCGGGCTaGCTCGCTTGGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKLRLPG*LAWLGD
Trigger: ATCCCCAAGCCAAGCGAGCCAGCCCGGCAGCCGGAG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATCCTCATCGCTCTCAATaGGCTCCTGCTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDPHRSQ*APASPA
Trigger: TGCAGGTGAAGCAGGAGCCCATTGAGAGCGATGAGG...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACACATGGGCTCCTCATCTaGTCTCTTTTCGGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTHGLLI*SLFGGL
Trigger: AAGCCCGCCGAAAAGAGACCAGATGAGGAGCCCATG...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCCACGGGAAAGTTTCTTaGCTGAGCTTCAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: PATALCHEWGMDQLLLPIHGKVS*LSFKTE
Trigger: CTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTG...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGAGACTGTGGAGTTGTaGGTAATAAACTTTAAGCAC +
Preference number: 4 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPETVEL*VINFKH
Trigger: GTGCTTAAAGTTTATTACCCACAACTCCACAGTCTC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCTACAAAAAGAAGAATaGAATGAGCACGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CAAHGGREQASGRLQCRYLQKEE*NEHVAV
Trigger: CACAGCCACGTGCTCATTCCATTCTTCTTTTTGTAG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCGGGCGGCGCTCGCCTaGCCCGTGGAAGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGERAALA*PVEGDK
Trigger: TTTATCTCCTTCCACGGGCCAGGCGAGCGCCGCCCG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATCTGGAACTCAGCGATaGGGATCTGCCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTSGTQR*GSASGS
Trigger: AGATCCAGAGGCAGATCCTCATCGCTGAGTTCCAGA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGGGAGCTGTTGTTGGGTaGGCTGGGTCCGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQGAVVG*AGSGAW
Trigger: CCAGGCTCCGGACCCAGCTCACCCAACAACAGCTCC...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCAGGCAGGCCCAGCGTaGTGTTGGGCAAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKQAGPA*CWARMA
Trigger: CGCCATCCTTGCCCAACATCACGCTGGGCCTGCCTG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGTGCTGTGGATCTCCATaGCTTTCTCCATGGAACGGA +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRCCGSP*LSPWNG
Trigger: TCCGTTCCATGGAGAAAGTCATGGAGATCCACAGCA...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGATGAACGTTGAACCATaGTGCTTCTCCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKMNVEP*CFSPLQ
Trigger: CTGGAGTGGGGAGAAGCATCATGGTTCAACGTTCAT...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTCCTGCTCCTGGCGGTaGCTCTCCAGCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSSCSWR*LSSFRW
Trigger: CCAGCGGAAGCTGGAGAGGCACCGCCAGGAGCAGGA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTAAGAGGGCTGTGCGCTaGCCCTCCGTCCCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSKRAVR*PSVPLQ
Trigger: TTGGAGCGGGACGGAGGGGCAGCGCACAGCCCTCTT...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTTCATCTGCAGTTGCTaGTGCTGGAACTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVFICSC*CWNCCL
Trigger: CAAGCAGCAGTTCCAGCAGCAGCAACTGCAGATGAA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTTCATCTGCAGTTGCTaGTGCTGGAACTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKFICSC*CWNCCL
Trigger: CAAGCAGCAGTTCCAGCAGCAGCAACTGCAGATGAA...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCTCCCGTGGGGGCTCTaGCTCTTCCTCATCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGELPWGL*LFLIAL
Trigger: GAGAGCGATGAGGAAGAGGCAGAGCCCCCACGGGAG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGTCCCGTTTCCATGGTaGACGTCCCAGTCCACGATG +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCVPFPW*TSQSTM
Trigger: CATCGTGGACTGGGACGTGCACCATGGAAACGGGAC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTGCCCAGGCGTGCATGTaGGTCTCGAGACCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSAQACM*VSRPVG
Trigger: GCCCACAGGTCTCGAGACGCACATGCACGCCTGGGC...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTTCCACGGCGTCCCTTaGGGGACCCGCCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSFHGVP*GTRQSV
Trigger: CACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACACGACCAGATGGAGATaGTCAATCGTATGTGACGTG +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDTTRWR*SIVCDV
Trigger: CACGTCACATACGATTGAGCATCTCCATCTGGTCGT...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCAGTGTGCCTACCACATaGTTCACGACCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVSVPTT*FTTRWR
Trigger: TCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACT...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTAACCCTCCCTGCCCTTaGCACGGAGGGGAAAAACAC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCNPPCP*HGGEKH
Trigger: GTGTTTTTCCCCTCCGTGGCAAGGGCAGGGAGGGTT...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGCAATCATACCCTCCCTaGAGGTTCACCAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKQSYPP*RFTRQQ
Trigger: TTGTTGCCTGGTGAACCTGCAGGGAGGGTATGATTG...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTCTGCCCTGGACGCTTaGTGTGGAGAAGAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCSALDA*CGEEPS
Trigger: ACTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACCGAGGCAGATCCTCTaGCATCTGCCCTGGACGCTT +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLPRQIL*HLPWTL
Trigger: AAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGCCAGAAAGTCCATCTaGATGGCTTTGGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRARKSI*MALGAH
Trigger: ATGAGCTCCCAAAGCCATCCAGATGGACTTTCTGGC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATCCTGCTGGTGCTTCATaGCCAGCATCTCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDPAGAS*PASPVV
Trigger: AACAACAGGAGATGCTGGCCATGAAGCACCAGCAGG...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGTGGTTCAGATTCCGGTaGGCCAGCGCCTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRWFRFR*ASAFFL
Trigger: TAAAAAGAAGGCGCTGGCCCACCGGAATCTGAACCA...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGAGGGAAGTCATCTTTaGCGTCGTACATTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKEGSHL*RRTFPG
Trigger: TCCTGGGAATGTACGACGCCAAAGATGACTTCCCTC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTCCCGGAGCTGTTGTTaGGTGAGCTGGGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGESRSCC*VSWVRS
Trigger: GCTCCGGACCCAGCTCACCCAACAACAGCTCCGGGA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCCAAGAGGGGTGGGGTaGCCCTCCACGGCATCGAAG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSPRGVG*PSTASK
Trigger: CTTCGATGCCGTGGAGGGCCACCCCACCCCTCTTGG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCCGAGGCGTCGCAAATaGCGGTCAGGTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSPRRRK*RSGRGL
Trigger: GAGGCCACGACCTGACCGCCATTTGCGACGCCTCGG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTGCGTCTCGAGACCTGTaGGCCTGGGCGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSASRDL*AWAAER
Trigger: CCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGC...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCCCGGAGATGACGGCTaGTGCCCGTGCTTGAGGCGT +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKPGDDG*CPCLRR
Trigger: ACGCCTCAAGCACGGGCACCAGCCGTCATCTCCGGG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTCCTGGACGCTTGCTGTaGAGAAGAGCCGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCPGRLL*RRAECV
Trigger: GACACACTCGGCTCTTCTCCACAGCAAGCGTCCAGG...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACTCCGTAAGAAGCTCTTaGGTGAGTAAGGTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDSVRSS*VSKVQA
Trigger: GGCTTGAACCTTACTCACCCAAGAGCTTCTTACGGA...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTTTCTCCAGAAACTGCTaGTGCTGCTGCTGGATGACC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCFSRNC*CCCWMT
Trigger: GGTCATCCAGCAGCAGCATCAGCAGTTTCTGGAGAA...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGTGCTGCCGGGAGAGCTaGTCGTGCTGCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQCCRES*SCCLWN
Trigger: GTTCCAGAGGCAGCACGAGCAGCTCTCCCGGCAGCA...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGTGCTTCTCCAGCTCCTaGTCCTGGCGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQCFSSS*SWRCLS
Trigger: GGAGAGGCACCGCCAGGAGCAGGAGCTGGAGAAGCA...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTGGATGACCAGGTGCTaGAGAGCCTGGGCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEWMTRC*RAWAFW
Trigger: CCAGAACGCCCAGGCTCTGCAGCACCTGGTCATCCA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTGGATGCACTCGCATTTaGCCCGGAGGCCCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSGCTRI*PGGPSP
Trigger: AGGAGACGGGCCTCCGGGGCAAATGCGAGTGCATCC...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGCCATCTGGATGGCTTTaGGAGCTCATTGCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKPSGWL*ELIASN
Trigger: ATTGCTAGCAATGAGCTCCCAAAGCCATCCAGATGG...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCCATCTGGATGGCTTTaGGAGCTCATTGCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRPSGWL*ELIASN
Trigger: ATTGCTAGCAATGAGCTCCCAAAGCCATCCAGATGG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGACAGGCAGTGAGAACTaGTGGTCCAGGCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGETGSEN*WSRRRS
Trigger: GGACCTGCGCCTGGACCACCAGTTCTCACTGCCTGT...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACACTCCGCTCTGGGGTaGAGAACTCTGGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLHSALG*RTLVKG
Trigger: TCCCTTGACCAGAGTTCTCCACCCCAGAGCGGAGTG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGAGGGAGAGCCTCTGCTaGAGGGCGGGAAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQRESLC*RAGRVS
Trigger: ACTCACCCTTCCCGCCCTCCAGCAGAGGCTCTCCCT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATTGCAGTTGCTGCTGCTaGAACTGCTGCTTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDCSCCC*NCCLCF
Trigger: GAAACACAAGCAGCAGTTCCAGCAGCAGCAACTGCA...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCGGGACAGAGGCCTGTaGCCGCCGAAGGACACGGGG +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQRDRGL*PPKDTG
Trigger: CCCCGTGTCCTTCGGCGGCCACAGGCCTCTGTCCCG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGGTACCCGAAGCATCTaGCGGAGAGGTTGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEGTRSI*RRGCSP
Trigger: GGGGCTACAACCTCTCCGCCAGATGCTTCGGGTACC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCACGGGAAAGTTTCTTaGCTGAGCTTCAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRHGKVS*LSFKTE
Trigger: CTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCCGCCAGAGTGTGCTTaGCTTCCGCGTGTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSPPECA*LPRVRV
Trigger: CACACGGACACGCGGAAGCCAAGCACACTCTGGCGG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACTGCTTCACGACCAGATaGAGATGCTCAATCGTATGT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDCFTTR*RCSIVC
Trigger: ACATACGATTGAGCATCTCCATCTGGTCGTGAAGCA...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGTTAAAAAGAGCCCCTaGGCTTCTTTATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSVKKSP*ASLYSS
Trigger: GGAGCTGTATAAAGAAGCCCAGGGGCTCTTTTTAAC...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACGTTAAAAAGAGCCCCTaGGCTTCTTTATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDVKKSP*ASLYSS
Trigger: GGAGCTGTATAAAGAAGCCCAGGGGCTCTTTTTAAC...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAAAAGACTGGCTGTCCTaGTCAGGCAATCATACCCTC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTKDWLS*SGNHTL
Trigger: GAGGGTATGATTGCCTGACCAGGACAGCCAGTCTTT...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGCTCTGTGCCATGAATaGGGAATGGACCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCALCHE*GMDQLL
Trigger: GAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTCGCTTGGCTTGGGGATaGTCTTGTTCATCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCRLAWG*SCSSAV
Trigger: AACTGCAGATGAACAAGATCATCCCCAAGCCAAGCG...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGGGAGGGCTTGCTGTCTaGAGAGCAGCTCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQGGLAV*RAAPAH
Trigger: GTGAGCAGGAGCTGCTCTTCAGACAGCAAGCCCTCC...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGGGTGGGACGCAGGCGTaGCACGGGAAAGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKGGTQA*HGKVSW
Trigger: CCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACC...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGAATGTGTTGGCGATCTaGAATCTAGCCAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRNVLAI*NLANLE
Trigger: CTCCAGATTGGCTAGATTTCAGATCGCCAACACATT...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACACTGCTCTGTGCCATaGATGGGGAATGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLHCSVP*MGNGPA
Trigger: AGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAAAAAGAAGAATGGAATaGGCACGTGGCTGTGACCAG +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTKRRME*ARGCDQ
Trigger: CTGGTCACAGCCACGTGCTCATTCCATTCTTCTTTT...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAAAAGATACCAGTCTGTaGCGAGGGGTGCTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLKDTSL*RGVLVP
Trigger: CGGCACAAGCACCCCTCGTCACAGACTGGTATCTTT...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTGGCCGAGCCTTCTCGTaGCACAAGTCTGTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSGRAFS*HKSVRQ
Trigger: TTGGCGCACAGACTTGTGGCACGAGAAGGCTCGGCC...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTGCTTGTGCCGGCGGCTaGTCCAGTAAGACCATGTGC +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSACAGG*SSKTMC
Trigger: GCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGC...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTACCGTGCTGGGCATGTaGTTCACGCGGGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSTVLGM*FTRAGF
Trigger: GAATCCTGCCCGCGTGAACCACATGCCCAGCACGGT...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGTGCTTGATGTGCTCGTaGAGCTGCGCCTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKCLMCS*SCASCC
Trigger: GCAGCACGAGGCGCAGCTCCACGAGCACATCAAGCA...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCTCTCCAGCTTCCGCTaGTGTTCCAGCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKLSSFR*CSSSSC
Trigger: GCAGGAGCTGCTGGAACACCAGCGGAAGCTGGAGAG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTCTTTCTGCTTTAGCCTaGACCGTAATTTCAGATTCG +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSLSALA*TVISDS
Trigger: CGAATCTGAAATTACGGTCCAGGCTAAAGCAGAAAG...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCGGCTCCACCTCCCGTaGGGGCTCTGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQRLHLP*GLCLFL
Trigger: GAGGAAGAGGCAGAGCCCCCACGGGAGGTGGAGCCG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTAGGAGCCCCGCTGCCTaGGAAGAAGTTCCCATCGTC +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSRSPAA*EEVPIV
Trigger: GACGATGGGAACTTCTTCCCAGGCAGCGGGGCTCCT...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGACTCGCATCTTCCGATaGCTTTTGAGAAACTCAAGC +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKTRIFR*LLRNSS
Trigger: GCTTGAGTTTCTCAAAAGCCATCGGAAGATGCGAGT...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCGCCAAGAGGCCCAGTaGCGTCATCAGGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKRQEAQ*RHQGFP
Trigger: AGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTAACACCTTGACAAAGTaGCCCTCCAGAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCNTLTK*PSRTRA
Trigger: GGCTCTGGTTCTGGAGGGCCACTTTGTCAAGGTGTT...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTAGAAGAGGATATCATTaGTCGGTGAAAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSRRGYH*SVKIHP
Trigger: TGGGTGGATTTTCACCGACCAATGATATCCTCTTCT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACGTCCACTCCTTTAAGTaGTTCGAAATGGCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDVHSFK*FEMAQN
Trigger: ATTTTGAGCCATTTCGAATCACTTAAAGGAGTGGAC...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACCTTCTCCTTGTTCTTaGGCTGCTGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLPSPCS*AAAASA
Trigger: AGCAGAAGCTGCAGCAGCTCAAGAACAAGGAGAAGG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCCACGGCCACGGAGTTaGAGTAGCAAAAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKPRPRS*SSKSPW
Trigger: CCATGGGCTTTTGCTACTTCAACTCCGTGGCCGTGG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTATATACACTTTGGAATaGAACTGGTGGCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSIYTLE*NWWLHV
Trigger: CACATGAAGCCACCAGTTTCATTCCAAAGTGTATAT...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACATATACACTTTGGAATaGAACTGGTGGCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDIYTLE*NWWLHV
Trigger: CACATGAAGCCACCAGTTTCATTCCAAAGTGTATAT...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTAGCCCAGTGACCAAGTaGATCCAAGAATCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCSPVTK*IQESAL
Trigger: GAGTGCAGATTCTTGGATTCACTTGGTCACTGGGCT...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCACTGCTCTGTGCCATaGATGGGGAATGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEHCSVP*MGNGPA
Trigger: AGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTCTCTCAGCACATTTGTaGAGCTGGAGTGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCLSAHL*SWSELT
Trigger: TGTCAGCTCACTCCAGCTTCACAAATGTGCTGAGAG...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTAAAAGAAGAATGGAATaGGCACGTGGCTGTGACCAG +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCKRRME*ARGCDQ
Trigger: CTGGTCACAGCCACGTGCTCATTCCATTCTTCTTTT...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATATCTGCAAATGTCATaGGAGGGGAACAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTYLQMS*EGNRKA
Trigger: TGCCTTTCTGTTCCCCTCTCATGACATTTGCAGATA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGATATCATTGGTCGGTaGAAATCCACCCACACAAAA +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRDIIGR*KSTHTK
Trigger: TTTTGTGTGGGTGGATTTTCACCGACCAATGATATC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTAATACTGGACTCCAGTaGAGTGGAAAGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCNTGLQ*SGKKVT
Trigger: GGTCACCTTCTTTCCACTTCACTGGAGTCCAGTATT...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGATGTGCTCGTGGAGCTaGGCCTCGTGCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQMCSWS*ASCCRE
Trigger: CTCCCGGCAGCACGAGGCGCAGCTCCACGAGCACAT...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTATCTGCAGTTGCTGCTaGTGGAACTGCTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCICSCC*WNCCLC
Trigger: ACACAAGCAGCAGTTCCAGCAGCAGCAACTGCAGAT...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTTGTTCATCTGCAGTTaGTGCTGCTGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCLFICS*CCWNCC
Trigger: GCAGCAGTTCCAGCAGCAGCAACTGCAGATGAACAA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCCGCAGGTGCACTGGTaGTTCAGCATCAGCGTGTCA +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKPQVHW*FSISVS
Trigger: TGACACGCTGATGCTGAAGCACCAGTGCACCTGCGG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGAAAAGCCCATGGGCGTaGTCTCCTCCGCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKKSPWA*SPPHGV
Trigger: GACACCATGCGGAGGAGAGCACGCCCATGGGCTTTT...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGCTCACGCTCAACCTCTaGTGCAGAAGCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQLTLNL*CRSLAA
Trigger: GGCAGCCAAGCTTCTGCAGCAGAGGTTGAGCGTGAG...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCTGACTCCCAGCCAGTaGCCCCAAGGCCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKLTPSQ*PQGLCK
Trigger: TTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGTCAG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTAAGTCAACACAGCTGTaGGGAAAAGGGGACTCTTTC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCKSTQL*GKGDSF
Trigger: GAAAGAGTCCCCTTTTCCGCACAGCTGTGTTGACTT...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATAATTGTAAACCACAGTaGTCGCACAGTTCACGACTG +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDNCKPQ*SHSSRL
Trigger: CAGTCGTGAACTGTGCGAGCACTGTGGTTTACAATT...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGCCAGAAAGTCCATCTaGATGGCTTTGGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCARKSI*MALGAH
Trigger: ATGAGCTCCCAAAGCCATCCAGATGGACTTTCTGGC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTAGCAGCTCCACTGGCTaGTCTCGGCCAGAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSSSSTG*SRPESP
Trigger: TGGACTTTCTGGCCGAGACCAGCCAGTGGAGCTGCT...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTGGGGTGGAGAACTCTaGTCAAGGGAACTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEWGGEL*SRELCC
Trigger: GCAGCACAGTTCCCTTGACCAGAGTTCTCCACCCCA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGCCGCAGCTTGTGGATaGAGGGGGACACCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQAAACG*RGTPGL
Trigger: CAGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTGCAGTTGCTGCTGCTaGAACTGCTGCTTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCCSCCC*NCCLCF
Trigger: GAAACACAAGCAGCAGTTCCAGCAGCAGCAACTGCA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGAGTAGCAAAAGCCCATaGGCGTGCTCTCCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGESSKSP*ACSPPH
Trigger: ATGCGGAGGAGAGCACGCCCATGGGCTTTTGCTACT...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATGGACAGCGTTTGCATTaGGTCTTTGCTGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDGQRLH*VFAVKP
Trigger: AGGTTTTACAGCAAAGACCCAATGCAAACGCTGTCC...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATGAAAGACACAATCGTTaGTGTCACTCCGAAAAGACC +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDERHNR*CHSEKT
Trigger: GGTCTTTTCGGAGTGACACCAACGATTGTGTCTTTC...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGCTCTGTGCCATGAATaGGGAATGGACCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEALCHE*GMDQLL
Trigger: GAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCCCCCACTGATAACCTaGCCACTGAGCAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEPPLIT*PLSSPC
Trigger: ACATGGACTGCTCAGTGGCCAGGTTATCAGTGGGGG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCTCTGCCATCTGCCCTaGACGCTTGCTGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSLCHLP*TLAVEK
Trigger: CTTCTCCACAGCAAGCGTCCAGGGCAGATGGCAGAG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACACAAAGCTGCCGAGTTTaGCGTGCAAAATCTGTATAC +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTQSCRV*RAKSVY
Trigger: GTATACAGATTTTGCACGCCAAACTCGGCAGCTTTG...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACAGTGTCGTTACAACTTaGTTTTCTACCACATTCCGT +
Preference number: 4 (lower is better)
Translates to: WDAGVTRESFLAELQDRDSVVTT*FSTTFR
Trigger: ACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTGTGGTACAGAATACTaGACTCCAGTGAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVCGTEY*TPVKWK
Trigger: TTTCCACTTCACTGGAGTCCAGTATTCTGTACCACA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGTGCACGCGGAGTCTGTaGCATCCAACGGACGCTTTT +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQCTRSL*HPTDAF
Trigger: AAAAGCGTCCGTTGGATGTCACAGACTCCGCGTGCA...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACGCTTGGCTTGGGGATaGTCTTGTTCATCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLRLAWG*SCSSAV
Trigger: AACTGCAGATGAACAAGATCATCCCCAAGCCAAGCG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGAGGGCGTCTCCATTTaGATGAGATTAGAATTAAGT +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPREGVSI*MRLELS
Trigger: ACTTAATTCTAATCTCATTCAAATGGAGACGCCCTC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTATCATCTTCACTTCTGTaGTGGCCACGGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLSSSLL*WPRHSL
Trigger: AAGAGAGTGCCGTGGCCAGCACAGAAGTGAAGATGA...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTGGTCAAGGGAACTGTaGTGCGTTTTCCCGTACCAG +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEWSREL*CVFPYQ
Trigger: CTGGTACGGGAAAACGCAGCACAGTTCCCTTGACCA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTCCAGTAAGACCATGTaGTGCAGAAGAGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGESSKTM*CRRGLC
Trigger: GCACAGCCCTCTTCTGCAGCACATGGTCTTACTGGA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGGGGGACACCCGGTCTaGACCAACCAAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQGGHPV*TNQGLC
Trigger: GCACAGTCCTTGGTTGGTGCAGACCGGGTGTCCCCC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCTCCCGTGGGGGCTCTaGCTCTTCCTCATCGCTCTC +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQLPWGL*LFLIAL
Trigger: GAGAGCGATGAGGAAGAGGCAGAGCCCCCACGGGAG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCTTTGCATTGGGTCTTTaGTGTAAAACCTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVFALGL*CKTFSG
Trigger: CCCAGAAAAGGTTTTACAGCAAAGACCCAATGCAAA...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGTGCCACGCCCAGGCGTaGATGTGCGTCTCGAGACCT +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQCHAQA*MCVSRP
Trigger: AGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCA...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCTGCCGAGTTTGGCGTaGAAAATCTGTATACAATAT +
Preference number: 4 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRLPSLA*KICIQY
Trigger: ATATTGTATACAGATTTTGCACGCCAAACTCGGCAG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGCACAAGATAACACGTTaGGTGATGTGGTACAGAATA +
Preference number: 4 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKHKITR*VMWYRI
Trigger: TATTCTGTACCACATCACGCAACGTGTTATCTTGTG...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCCACATCCACCGTGCTaGGCATGTGGTTCACGCGGG +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQPHPPC*ACGSRG
Trigger: CCCGCGTGAACCACATGCCCAGCACGGTGGATGTGG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTATGGTTCAGATTCCGGTaGGCCAGCGCCTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLWFRFR*ASAFFL
Trigger: TAAAAAGAAGGCGCTGGCCCACCGGAATCTGAACCA...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGATGTTGGGCAAGGATaGCGATGTGTAGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEDVGQG*RCVEGK
Trigger: CTTCCCCTCTACACATCGCCATCCTTGCCCAACATC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCAGACACGGGGAAGGTaGCAGACGCGGGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQQTRGR*QTRVRT
Trigger: AGTCCTCACCCGCGTCTGCCACCTTCCCCGTGTCTG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGCGCTCGCCTGGCCCGTaGAAGGAGATAAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQRSPGP*KEIKGN
Trigger: GTTTCCTTTTATCTCCTTCCACGGGCCAGGCGAGCG...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGTCTGCTGCTTCTGCTTaGGCGCCAGGAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQSAASA*APGAPA
Trigger: AGCAGGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGA...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAGGAAAGTTTCTTGGCTaGGCTTCAAGACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLGKFLG*ASRQRQ
Trigger: CTGTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCC...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTATCGTATGTGACGTGTaGGAACACTTTGGATTCGTT +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCIVCDV*EHFGFV
Trigger: AACGAATCCAAAGTGTTCTCACACGTCACATACGAT...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCTCTCAGCACATTTGTaGAGCTGGAGTGAGCTGACA +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGELSAHL*SWSELT
Trigger: TGTCAGCTCACTCCAGCTTCACAAATGTGCTGAGAG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTGGTCAAGGGAACTGTaGTGCGTTTTCCCGTACCAG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSWSREL*CVFPYQ
Trigger: CTGGTACGGGAAAACGCAGCACAGTTCCCTTGACCA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTATGCTGCTGGAACTGCTaGTTGTGTTTCTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLCCWNC*LCFSRN
Trigger: GTTTCTGGAGAAACACAAGCAGCAGTTCCAGCAGCA...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCACAAGCCATCCATTTaGAGGGACCTTCGCAATCTG +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEHKPSI*RDLRNL
Trigger: CAGATTGCGAAGGTCCCTGCAAATGGATGGCTTGTG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCCCACGTGTGCCCCATaGATTGCTGACATGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSPTCAP*IADMLK
Trigger: TTTGAGCATGTCAGCAATGCATGGGGCACACGTGGG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTACTGGTGGCTTCATGTaGTGGAAAATAAGTTACCAG +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCTGGFM*WKISYQ
Trigger: CTGGTAACTTATTTTCCAGCACATGAAGCCACCAGT...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGGTCCCAAGACCGTTCTaGCTGCTCTCAAACCACTGT +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQVPRPF*LLSNHC
Trigger: ACAGTGGTTTGAGAGCAGGCAGAACGGTCTTGGGAC...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCTTCTTCCCCAAAGCTaGCGAGTTTGGCGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGELLPQS*RVWRAK
Trigger: TTTTGCACGCCAAACTCGGCAGCTTTGGGGAAGAAG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTCAGACTTTTAATCAATaGCAGAGACAAAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCQTFNQ*QRQSEA
Trigger: GGCCTCACTTTGTCTCTGGCATTGATTAAAAGTCTG...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTCTTCACTTCTGTGCTaGCCACGGCACTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSSSLLC*PRHSLC
Trigger: GCAAAGAGAGTGCCGTGGCCAGCACAGAAGTGAAGA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCTCCCGCAGGTGCACTaGTGCTTCAGCATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQLPQVH*CFSISV
Trigger: CACGCTGATGCTGAAGCACCAGTGCACCTGCGGGAG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGACATGTACAGGACGCTaGGGTCGCTGTAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQTCTGR*GRCRKP
Trigger: AGGCTTTCTACAGCGACCCCAGCGTCCTGTACATGT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGGCAACAAGGGTCCCTaGGTTCCTTGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQGNKGP*VPCSHR
Trigger: CCTGTGGCTGCAAGGAACCCAGGGACCCTTGTTGCC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATACCCAATATACACTTTaGAATGAAACTGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDTQYTL*NETGGF
Trigger: GAAGCCACCAGTTTCATTCCAAAGTGTATATTGGGT...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAGTCATTCTCATCAATTaGAAAATAGCGCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTVILIN*KIAPPL
Trigger: TAGTGGAGGCGCTATTTTCCAATTGATGAGAATGAC...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTATCGTATGTGACGTGTaGGAACACTTTGGATTCGTT +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCIVCDV*EHFGFV
Trigger: AACGAATCCAAAGTGTTCTCACACGTCACATACGAT...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATCTGAAAATAGAATCTaGCAGCAACAATTCTGTACG +
Preference number: 4 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTSENRI*QQQFCT
Trigger: CGTACAGAATTGTTGCTGTCAGATTCTATTTTCAGA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTGAGGGCGTCTCCATTTaGATGAGATTAGAATTAAGT +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCEGVSI*MRLELS
Trigger: ACTTAATTCTAATCTCATTCAAATGGAGACGCCCTC...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGTCATCTTCACTTCTGTaGTGGCCACGGCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKSSSLL*WPRHSL
Trigger: AAGAGAGTGCCGTGGCCAGCACAGAAGTGAAGATGA...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGTCCAGCAGGAGGGCTTaGTGTCTGAAGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQSSRRA*CLKSSS
Trigger: GGAGCTGCTCTTCAGACAGCAAGCCCTCCTGCTGGA...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGAGTGTGCCTACCACATaGTTCACGACCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQSVPTT*FTTRWR
Trigger: TCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCAATCATACCCTCCCTaGAGGTTCACCAGGCAACAA +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSQSYPP*RFTRQQ
Trigger: TTGTTGCCTGGTGAACCTGCAGGGAGGGTATGATTG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGCAAAGGGATATAAAGTaGTCGCTTGCTGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEQRDIK*SLADSQ
Trigger: CTGGGAGTCAGCAAGCGAGCACTTTATATCCCTTTG...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTACAATATAAAGTCATaGCGGTCGTACAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCYNIKS*RSYSPC
Trigger: GCATGGACTGTACGACCGGCATGACTTTATATTGTA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGCTTCTTCCCCAAAGCTaGCGAGTTTGGCGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKLLPQS*RVWRAK
Trigger: TTTTGCACGCCAAACTCGGCAGCTTTGGGGAAGAAG...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGAAAGTCCATCTGGATaGCTTTGGGAGCTCATTGCT +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEESPSG*LWELIA
Trigger: AGCAATGAGCTCCCAAAGCCATCCAGATGGACTTTC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTTCTGCCCCCAAGTCTaGACCCAATATACACTTTGG +
Preference number: 4 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSFCPQV*TQYTLW
Trigger: CCAAAGTGTATATTGGGTTCAGACTTGGGGGCAGAA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGAAGCTGGAGTGAGCTaGCAGATGAAACGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQEAGVS*QMKRAS
Trigger: GGAGGCACGTTTCATCTGTCAGCTCACTCCAGCTTC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTCACGACTGCTTAAAGTaGAATCTTAGCCATACATCA +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCHDCLK*NLSHTS
Trigger: TGATGTATGGCTAAGATTTCACTTTAAGCAGTCGTG...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGTGCTACTCCCGCAGGTaGACTGGTGCTTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQCYSRR*TGASAS
Trigger: TGATGCTGAAGCACCAGTGCACCTGCGGGAGTAGCA...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTTTGCATTGGGTCTTTaGTGTAAAACCTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCFALGL*CKTFSG
Trigger: CCCAGAAAAGGTTTTACAGCAAAGACCCAATGCAAA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTGATATTTGTTTTCTGTaGCTCGTGTCAACTGAATTC +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCDICFL*LVSTEF
Trigger: GAATTCAGTTGACACGAGGCACAGAAAACAAATATC...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTAACAATTCTGTACGCTaGAGAAAACTCATCGTACAA +
Preference number: 4 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCNNSVR*RKLIVQ
Trigger: TTGTACGATGAGTTTTCTGCAGCGTACAGAATTGTT...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGTCCGTAAGAAGCTCTTaGGTGAGTAAGGTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQSVRSS*VSKVQA
Trigger: GGCTTGAACCTTACTCACCCAAGAGCTTCTTACGGA...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAAGAAGAGGATATCATTaGTCGGTGAAAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLRRGYH*SVKIHP
Trigger: TGGGTGGATTTTCACCGACCAATGATATCCTCTTCT...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTATGTGGTACAGAATACTaGACTCCAGTGAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLCGTEY*TPVKWK
Trigger: TTTCCACTTCACTGGAGTCCAGTATTCTGTACCACA...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp AAGTGGAAAGAAGGTGACCGTCAGAAGAGGATATCATaGGTCGGTGAAAATCCACCCACACAAAACAAGACA +
Preference number: 4 (lower is better)
Translates to: KWKEGDRQKRIS*VGENPPTQNKT
Trigger: TGTCTTGTTTTGTGTGGGTGGATTTTCACCGACCAATGATATCCTCTTCTGACGGTCACCTTCTTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGATGCTCAATCGTATGTaGCGTGTGAGAACACTTTGG +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQMLNRM*RVRTLW
Trigger: CCAAAGTGTTCTCACACGTCACATACGATTGAGCAT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGAAAACTGAAACACCTTaGCAAAGTGGCCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQKTETP*QSGPPE
Trigger: TTCTGGAGGGCCACTTTGTCAAGGTGTTTCAGTTTT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGTATCTGCAAATGTCATaGGAGGGGAACAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKYLQMS*EGNRKA
Trigger: TGCCTTTCTGTTCCCCTCTCATGACATTTGCAGATA...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGATGCCAGAGACAAAGTaGGGCCGAGCTAAGAACACG +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQMPETK*GRAKNT
Trigger: CGTGTTCTTAGCTCGGCCTCACTTTGTCTCTGGCAT...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGATATCATTGGTCGGTaGAAATCCACCCACACAAAA +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEDIIGR*KSTHTK
Trigger: TTTTGTGTGGGTGGATTTTCACCGACCAATGATATC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGTGCTTCACGACCAGATaGAGATGCTCAATCGTATGT +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQCFTTR*RCSIVC
Trigger: ACATACGATTGAGCATCTCCATCTGGTCGTGAAGCA...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGAGGGTAGTTGCCCAGTaGCGAATGTGTTGGCGATCT +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQRVVAQ*RMCWRS
Trigger: AGATCGCCAACACATTCGCCACTGGGCAACTACCCT...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp AGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTaGTGTCAGACCATTACGAAATGGTCCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SPLLVLQKSNLL*CQTITKWSFPL
Trigger: CAAGGGGAAGGACCATTTCGTAATGGTCTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGAGGGAAGTCATCTTTaGCGTCGTACATTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQEGSHL*RRTFPG
Trigger: TCCTGGGAATGTACGACGCCAAAGATGACTTCCCTC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGAGACTGTGGAGTTGTaGGTAATAAACTTTAAGCAC +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEETVEL*VINFKH
Trigger: GTGCTTAAAGTTTATTACCCACAACTCCACAGTCTC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTATCTATCCTGACGATGTaGTCAGAGAAGTTTAAACAT +
Preference number: 4 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLSILTM*SEKFKH
Trigger: ATGTTTAAACTTCTCTGACCACATCGTCAGGATAGA...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGTCATTCTCATCAATTaGAAAATAGCGCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEVILIN*KIAPPL
Trigger: TAGTGGAGGCGCTATTTTCCAATTGATGAGAATGAC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGGTTACCAGTAAAACGTaGCTGTCAGTTACTGTTGAA +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQVTSKT*LSVTVE
Trigger: TTCAACAGTAACTGACAGTCACGTTTTACTGGTAAC...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGAATACTGGACTCCAGTaGAGTGGAAAGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQNTGLQ*SGKKVT
Trigger: GGTCACCTTCTTTCCACTTCACTGGAGTCCAGTATT...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGGTGAATCCAAGAATCTaGACTCATTTGGTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEVNPRI*THLVKS
Trigger: ACTTTTGACCAAATGAGTGCAGATTCTTGGATTCAC...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGAGTGTCGTTACAACTTaGTTTTCTACCACATTCCGT +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQSVVTT*FSTTFR
Trigger: ACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGGCGCCTTCTTTTTATTaGGGACAAATTCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKAPSFY*GQILVT
Trigger: AGTTACAAGAATTTGTCCTCAATAAAAAGAAGGCGC...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGAACAATTCTGTACGCTaGAGAAAACTCATCGTACAA +
Preference number: 4 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQNNSVR*RKLIVQ
Trigger: TTGTACGATGAGTTTTCTGCAGCGTACAGAATTGTT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
3UTR CAA 72 bp GGAGATGCTCAATCGTATGTGACGTGTGAGAACACTTaGGATTCGTTTAAAATTTGTTGGACTTCAAAACCT +
Preference number: 4 (lower is better)
Translates to: GDAQSYVTCENT*DSFKICWTSKP
Trigger: AGGTTTTGAAGTCCAACAAATTTTAAACGAATCCAAAGTGTTCTCACACGTCACATACGATTGAGCATCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR TCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGTCCACTCCTTTAAGTaGTTCGAAATGGCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQVHSFK*FEMAQN
Trigger: ATTTTGAGCCATTTCGAATCACTTAAAGGAGTGGAC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR GCA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGGATATTTGTTTTCTGTaGCTCGTGTCAACTGAATTC +
Preference number: 4 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQDICFL*LVSTEF
Trigger: GAATTCAGTTGACACGAGGCACAGAAAACAAATATC...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp CCGCCGGGATGCTGGGGACGGCGGGCGCGATACCGTTCTCCGCGCTaGCGCTCCCGGAGCTGTTGTTGGGTGAGCTGGGTCCGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: PPGCWGRRARYRSPR*RSRSCCWVSWVRSL
Trigger: CAGGCTCCGGACCCAGCTCACCCAACAACAGCTCCGGGAGCGTCAGCGCGGAGAACGGTATCGCGCCCGCCGTCCCCAGCATCCCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS-3UTR CAA 90 bp TCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGCCACGCCCAGGCGGATGCACTCGCATTaGCCCCGGAGGCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: SARRRRLSRVPCEAATPRRMHSH*PRRPVS
Trigger: GGAGACGGGCCTCCGGGGCAAATGCGAGTGCATCCG...CCTGGGCGTGGCAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp CTGCTGCAGCTGCTGCTCCCGCAGGGCCGGCTCTGCCACAGGCAGTaGGAACTGGTGGTCCAGGCGCAGGTCCATGGGCACTGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: LLQLLLPQGRLCHRQ*ELVVQAQVHGHCRG
Trigger: CCCTCGGCAGTGCCCATGGACCTGCGCCTGGACCACCAGTTCTCACTGCCTGTGGCAGAGCCGGCCCTGCGGGAGCAGCAGCTGCAGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS CCA 90 bp AGCTGCTGCTCCCGCAGGGCCGGCTCTGCCACAGGCAGTGAGAACTaGTGGTCCAGGCGCAGGTCCATGGGCACTGCCGAGGGGGCCACT +
Preference number: 5 (lower is better)
Translates to: SCCSRRAGSATGSEN*WSRRRSMGTAEGAT
Trigger: AGTGGCCCCCTCGGCAGTGCCCATGGACCTGCGCCTGGACCACCAGTTCTCACTGCCTGTGGCAGAGCCGGCCCTGCGGGAGCAGCAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS GCA 90 bp TGGGCGGTGCTGCCGCAGCTTGTGGATGGAGGGGGACACCCGGTCTaGACCAACCAAGGACTGTGCGTGGAGGGGCAGTGCTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: WAVLPQLVDGGGHPV*TNQGLCVEGQCSQA
Trigger: GGCCTGGGAGCACTGCCCCTCCACGCACAGTCCTTGGTTGGTGCAGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAGCACCGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 90 bp CTCATCGCTCTCAATGGGCTCCTGCTTCACCTGCACGCCGGCCTGTaGGTGCGCCTCCTTCTGCCCCGGCAGCCGGTCCAGGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LIALNGLLLHLHAGL*VRLLLPRQPVQVGL
Trigger: GAGCCCTACCTGGACCGGCTGCCGGGGCAGAAGGAGGCGCACGCACAGGCCGGCGTGCAGGTGAAGCAGGAGCCCATTGAGAGCGATGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 90 bp CCGACTGGGTCCGCCCCAGTGGGCGGTGCTGCCGCAGCTTGTGGATaGAGGGGGACACCCGGTCTGCACCAACCAAGGACTGTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: PTGSAPVGGAAAACG*RGTPGLHQPRTVRG
Trigger: TCCACGCACAGTCCTTGGTTGGTGCAGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAGCACCGCCCACTGGGGCGGACCCAGTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 90 bp GAGGCCTGTGGCCGCCGAAGGACACGGGGATGCCGGCGGCCTCCATaGACGCCTGGTAGTTCCTCAGCTGGTGGATCCGCTGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: EACGRRRTRGCRRPP*TPGSSSAGGSAAAP
Trigger: TGGAGCAGCAGCGGATCCACCAGCTGAGGAACTACCAGGCGTCCATGGAGGCCGCCGGCATCCCCGTGTCCTTCGGCGGCCACAGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS-3UTR CAA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCTGTGACGAGGGGTGCTaGTGCCGGCGGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VPPADAEADPLPSALDACCDEGC*CRRLLQ
Trigger: CTGGAGCAGCCGCCGGCACAAGCACCCCTCGTCACA...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTTCCTCCAGGGTGGCCTaGCGTCCGCGGATGCACTCG +
Preference number: 5 (lower is better)
Translates to: QASSRCQHCQARLATGNCSSRVA*RPRMHS
Trigger: CGAGTGCATCCGCGGACGCAAGGCCACCCTGGAGGA...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCTTCCACGGCGTCCCTaGCGGGACCCGCCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: VPPADAEADPLPSALDACLPRRP*RDPPEC
Trigger: ACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS GCA 90 bp ACGAGGGGTGCTTGTGCCGGCGGCTGCTCCAGTAAGACCATGTGCTaGAGAAGAGGGCTGTGCGCTGCCCCTCCGTCCCGCTCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: TRGACAGGCSSKTMC*RRGLCAAPPSRSKG
Trigger: GCCCTTGGAGCGGGACGGAGGGGCAGCGCACAGCCCTCTTCTGCAGCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGCACCCCTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345617.7
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 90 bp GCAGAAACACATGCTTCCGAGGCGTCGCAAATGGCGGTCAGGTCGTaGCCTCCCTCGAGGGCCAGGACAATCCGGCCGCCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: AETHASEASQMAVRS*PPSRARTIRPPARP
Trigger: GGGCCTGGCTGGCGGCCGGATTGTCCTGGCCCTCGAGGGAGGCCACGACCTGACCGCCATTTGCGACGCCTCGGAAGCATGTGTTTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000494800.1
ENST00000543185.6
CDS-3UTR CAA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCGGTGCTGCCGCAGCTaGTGGATGGAGGGGGACACC +
Preference number: 5 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGRCCRS*WMEGDT
Trigger: GGTGTCCCCCTCCATCCACAAGCTGCGGCAGCACCG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS GCA 90 bp GTGACGAGGGGTGCTTGTGCCGGCGGCTGCTCCAGTAAGACCATGTaGTGCAGAAGAGGGCTGTGCGCTGCCCCTCCGTCCCGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VTRGACAGGCSSKTM*CRRGLCAAPPSRSK
Trigger: CTTGGAGCGGGACGGAGGGGCAGCGCACAGCCCTCTTCTGCAGCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGCACCCCTCGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345617.7
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 90 bp GGCAGTGCTCCCAGGCCTGTGACGAGGGGTGCTTGTGCCGGCGGCTaGTCCAGTAAGACCATGTGCTGCAGAAGAGGGCTGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: GSAPRPVTRGACAGG*SSKTMCCRRGLCAA
Trigger: GGCAGCGCACAGCCCTCTTCTGCAGCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGCACCCCTCGTCACAGGCCTGGGAGCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000463007.5
CDS GCA 90 bp CCCTCGAGGGCCAGGACAATCCGGCCGCCAGCCAGGCCCATCAGCTaGTTCGTCAGGTACCCGAAGCCTGCAACGGGAAACGGGAGACTG +
Preference number: 5 (lower is better)
Translates to: PSRARTIRPPARPIS*FVRYPKPATGNGRL
Trigger: CAGTCTCCCGTTTCCCGTTGCAGGCTTCGGGTACCTGACGAAGCAGCTGATGGGCCTGGCTGGCGGCCGGATTGTCCTGGCCCTCGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430200.1
CDS GCA 90 bp CTTCTGCAGATGAACCAAAAGACGCTCCAGGCGCCAGCCGCTGGGTaGTTCGCGGTTGAGGAGGCGCAGGGACCGGGGGCCAGTAGTGGC +
Preference number: 5 (lower is better)
Translates to: LLQMNQKTLQAPAAG*FAVEEAQGPGASSG
Trigger: GCCACTACTGGCCCCCGGTCCCTGCGCCTCCTCAACCGCGAAGCACCCAGCGGCTGGCGCCTGGAGCGTCTTTTGGTTCATCTGCAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS-3UTR CAA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGACGCTCCCGGAGCTGTaGTTGGGTGAGCTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGTLPEL*LGELGP
Trigger: CGGACCCAGCTCACCCAACAACAGCTCCGGGAGCGT...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCGGATGCACTCGCATTaGCCCCGGAGGCCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCRMHSH*PRRPVS
Trigger: GGAGACGGGCCTCCGGGGCAAATGCGAGTGCATCCG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCAGCTCGGCCGCCTGTaGCCACAGGCTCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VPPADAEADPLPSALDACQLGRL*PQAPFF
Trigger: GAAGAAAGGAGCCTGTGGCAACAGGCGGCCGAGCTG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTCCCTGGGTGCTCCAAGAGAGCCCCACGGTGGGACGCAGGCGTGACACGGGAAAGGCCCAGCGTGATGTaGGGCAAGGATGGCGATGTG +
Preference number: 5 (lower is better)
Translates to: VPGCSKRAPRWDAGVTRERPSVM*GKDGDV
Trigger: CACATCGCCATCCTTGCCCAACATCACGCTGGGCCT...TTCCCGTGTCACGCCTGCGTCCCACCGTGGGGCTCTCTTGGAGCACCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGTCCCCTGTGGCCACCTaGAAGACCAGCTCTACCACG +
Preference number: 5 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLSPVAT*KTSSTT
Trigger: CGTGGTAGAGCTGGTCTTCAAGGTGGCCACAGGGGA...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTGGGTCCCTGGGTTCCTaGCAGCCACAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: QASSRCQHCQARLATGNCGSLGS*QPQAPK
Trigger: TTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACCC...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp CGTCAGGTACCCGAAGCCTGCAACGGGAAACGGGAGACTGCAGTGTaGACGGGGGAGGACCGCAGCCAGCACAGCCCAGAAACGCGTCTC +
Preference number: 5 (lower is better)
Translates to: RQVPEACNGKRETAV*TGEDRSQHSPETRL
Trigger: GAGACGCGTTTCTGGGCTGTGCTGGCTGCGGTCCTCCCCCGTTCACACTGCAGTCTCCCGTTTCCCGTTGCAGGCTTCGGGTACCTGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430200.1
CDS GCA 90 bp GGATGGCGATGTGTAGAGGGGAAGTGGAGCGGCCGAGCCTTCTCGTaGCACAAGTCTGTGCGCCAAACTCGTCTCCGCCGGGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: GWRCVEGKWSGRAFS*HKSVRQTRLRRDAG
Trigger: CCCAGCATCCCGGCGGAGACGAGTTTGGCGCACAGACTTGTGGCACGAGAAGGCTCGGCCGCTCCACTTCCCCTCTACACATCGCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS-3UTR CAA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCTCCAGCAGGAGGGCTaGCTGTCTGAAGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGLQQEG*LSEEQL
Trigger: GAGCTGCTCTTCAGACAGCAAGCCCTCCTGCTGGAG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGAAAGCCATGTTGACGTaGAAACCCACGCCGGGCCCT +
Preference number: 5 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLKAMLT*KPTPGP
Trigger: AGGGCCCGGCGTGGGTTTCAACGTCAACATGGCTTT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCGCCCCGCTGTGGAGGTaGTGCGCTGCAGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PATALCHEWGMDQLLLPIAPLWR*CAAGSA
Trigger: GGCGCTGCCTGCAGCGCACAACCTCCACAGCGGGGC...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS GCA 90 bp GCTGCTTCGTCAGGTACCCGAAGCCTGCAACGGGAAACGGGAGACTaGAGTGTGAACGGGGGAGGACCGCAGCCAGCACAGCCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: AASSGTRSLQRETGD*SVNGGGPQPAQPRN
Trigger: GTTTCTGGGCTGTGCTGGCTGCGGTCCTCCCCCGTTCACACTGCAGTCTCCCGTTTCCCGTTGCAGGCTTCGGGTACCTGACGAAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430200.1
CDS CCA 90 bp AATCCAGGCTTGACGACAGACTGGGCTGGTGCCCTGGACAAGCGGTaGCTTCCAGAAGCTGGGGGAGCCCCTGGGCATCACGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: NPGLTTDWAGALDKR*LPEAGGAPGHHVEM
Trigger: CATCTCCACGTGATGCCCAGGGGCTCCCCCAGCTTCTGGAAGCCACCGCTTGTCCAGGGCACCAGCCCAGTCTGTCGTCAAGCCTGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS-3UTR CAA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGGCCACGGCACTCTCTTaGCCCTTCTCCTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLATALS*PFSLFL
Trigger: CAAGAACAAGGAGAAGGGCAAAGAGAGTGCCGTGGC...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCGCTGGCTCGCTTGGCTaGGGGATGATCTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: VPPADAEADPLPSALDACAGSLG*GMILFI
Trigger: GATGAACAAGATCATCCCCAAGCCAAGCGAGCCAGC...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTTCCCCTGTGGCCACCTaGAAGACCAGCTCTACCACG +
Preference number: 5 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCSPVAT*KTSSTT
Trigger: CGTGGTAGAGCTGGTCTTCAAGGTGGCCACAGGGGA...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGCCGGTGAAAGCCATGTaGACGTTGAAACCCACGCCG +
Preference number: 5 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGPVKAM*TLKPTP
Trigger: CGGCGTGGGTTTCAACGTCAACATGGCTTTCACCGG...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGTATGTGCATGAAGGCTaGGAGACGGGAGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLYVHEG*ETGAVL
Trigger: CAGAACCGCTCCCGTCTCCAAGCCTTCATGCACATA...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp AGGAATGAGGAGCATGGCCTGAAGGCCTGGCCTGTAGGAGCGACGTaGGGACTGGGGTCGGGGTGCTCTCTTCCAAGCAGTGAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RNEEHGLKAWPVGAT*GLGSGCSLPSSEAS
Trigger: GCTGGCTTCACTGCTTGGAAGAGAGCACCCCGACCCCAGTCCTCACGTCGCTCCTACAGGCCAGGCCTTCAGGCCATGCTCCTCATTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS GCA 90 bp CGGGAGAGCTGCTCGTGCTGCCTCTGGAACTCAGCGATGAGGATCTaGCTCTGGATCTGCTGCTTCTGCTTGAGCGCCAGGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RESCSCCLWNSAMRI*LWICCFCLSARSSC
Trigger: GCAGGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGATCCAGAGGCAGATCCTCATCGCTGAGTTCCAGAGGCAGCACGAGCAGCTCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS GCA 90 bp GCCAGACCTAAGATCAAATCCAGGCTTGACGACAGACTGGGCTGGTaGCCTGGACAAGCGGTGGCTTCCAGAAGCTGGGGGAGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ARPKIKSRLDDRLGW*PGQAVASRSWGSPW
Trigger: CCAGGGGCTCCCCCAGCTTCTGGAAGCCACCGCTTGTCCAGGGCACCAGCCCAGTCTGTCGTCAAGCCTGGATTTGATCTTAGGTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS CCA 90 bp GCAGCCAGACCTAAGATCAAATCCAGGCTTGACGACAGACTGGGCTaGTGCCCTGGACAAGCGGTGGCTTCCAGAAGCTGGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: AARPKIKSRLDDRLG*CPGQAVASRSWGSP
Trigger: GGGGCTCCCCCAGCTTCTGGAAGCCACCGCTTGTCCAGGGCACCAGCCCAGTCTGTCGTCAAGCCTGGATTTGATCTTAGGTCTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS-3UTR CAA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCTCTTTGCCCTTCTCCTaGTTCTTGAGCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ASLAGPARVCLASACPCVSLPFS*FLSCCS
Trigger: GCTGCAGCAGCTCAAGAACAAGGAGAAGGGCAAAGA...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGGGCTTGGGGATGATCTaGTTCATCTGCAGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLGLGMI*FICSCC
Trigger: GCAGCAACTGCAGATGAACAAGATCATCCCCAAGCC...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TTCCCTGTGAGGCTGCCACGCCCAGGCGTGCATGTGCGTCTCGAGACCTGTGGGAGGCAGCGCCAGTACTaGCTGTGGATCTCCATGACT +
Preference number: 5 (lower is better)
Translates to: FPVRLPRPGVHVRLETCGRQRQY*LWISMT
Trigger: AGTCATGGAGATCCACAGCAAGTACTGGCGCTGCCT...CCCACAGGTCTCGAGACGCACATGCACGCCTGGGCGTGGCAGCCTCACAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGGCCCCGCTGTGGAGGTaGTGCGCTGCAGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKAPLWR*CAAGSA
Trigger: GGCGCTGCCTGCAGCGCACAACCTCCACAGCGGGGC...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCGGCTTCCCGTGGCTGTaGCACGCTGGGTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PATALCHEWGMDQLLLPIGFPWL*HAGCPW
Trigger: CCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCC...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAGGAAAGACACAATCGTaGGTGTCACTCCGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: RRQASSRCQHCQARLATGGKTQS*VSLRKD
Trigger: GTCTTTTCGGAGTGACACCAACGATTGTGTCTTTCC...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGGGTCCCTGGGTTCCTaGCAGCCACAGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPGSLGS*QPQAPK
Trigger: TTTTGGAGCCTGTGGCTGCAAGGAACCCAGGGACCC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGACAGAAGAGGATATCATaGGTCGGTGAAAATCCACCC +
Preference number: 5 (lower is better)
Translates to: RRQASSRCQHCQARLATGQKRIS*VGENPP
Trigger: GGGTGGATTTTCACCGACCAATGATATCCTCTTCTG...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp CAACGAGCTCCAAACTCCCACCAACACATACAAGTACCGGGACGGTaGGGGCTGGGTCACAGACGTTCAAGCGCCGAGCCTCGCCGGCAA +
Preference number: 5 (lower is better)
Translates to: QRAPNSHQHIQVPGR*GLGHRRSSAEPRRQ
Trigger: TTGCCGGCGAGGCTCGGCGCTTGAACGTCTGTGACCCAGCCCTCACCGTCCCGGTACTTGTATGTGTTGGTGGGAGTTTGGAGCTCGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS TCA 90 bp CCGACAGCCATGGCGGCTTCGGGGTGGGGTCCTAATCATGCACTGTaGATGCTCCAGGTGGATCAACGGCAAGGACTGCAGGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: PTAMAASGWGPNHAL*MLQVDQRQGLQGSP
Trigger: TGGTGAGCCCTGCAGTCCTTGCCGTTGATCCACCTGGAGCATTCACAGTGCATGATTAGGACCCCACCCCGAAGCCGCCATGGCTGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS TCA 90 bp TTGCAGGTCCATTGCAGGACGCCTCCTTCTCAAACTGAGCCCCTCTaGGCGCCGAGTGCTTTGGGGCTCCTAAGCAGGAGCCAGGCGTGT +
Preference number: 5 (lower is better)
Translates to: LQVHCRTPPSQTEPL*APSALGLLSRSQAC
Trigger: ACACGCCTGGCTCCTGCTTAGGAGCCCCAAAGCACTCGGCGCTCAGAGGGGCTCAGTTTGAGAAGGAGGCGTCCTGCAATGGACCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS TCA 90 bp ACCAGGGCGATTGCAGGTCCATTGCAGGACGCCTCCTTCTCAAACTaGGCCCCTCTGAGCGCCGAGTGCTTTGGGGCTCCTAAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: TRAIAGPLQDASFSN*APLSAECFGAPKQE
Trigger: CTCCTGCTTAGGAGCCCCAAAGCACTCGGCGCTCAGAGGGGCTCAGTTTGAGAAGGAGGCGTCCTGCAATGGACCTGCAATCGCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS GCA 90 bp CCTGAAAGATACCAGTCTGTGACGAGGGGTGCTTGTGCCGGCGGCTaGTCCAGTAAGACCATGTGCTGCAGAAGAGGGCTGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: PERYQSVTRGACAGG*SSKTMCCRRGLCAA
Trigger: GGCAGCGCACAGCCCTCTTCTGCAGCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGCACCCCTCGTCACAGACTGGTATCTTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461113.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 90 bp CTGGGGATGCAGGTGCCCCTGCAGCCTCATTCCACCCACATCCGGTaGACAGCACACACAGGATCAGCAGTGATAGGAACAGCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: LGMQVPLQPHSTHIR*TAHTGSAVIGTACH
Trigger: GTGGCAGGCTGTTCCTATCACTGCTGATCCTGTGTGTGCTGTGCACCGGATGTGGGTGGAATGAGGCTGCAGGGGCACCTGCATCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463007.5
CDS GCA 90 bp CAGCCATGGCGGCTTCGGGGTGGGGTCCTAATCATGCACTGTGAATaGTCCAGGTGGATCAACGGCAAGGACTGCAGGGCTCACCAGGGT +
Preference number: 5 (lower is better)
Translates to: QPWRLRGGVLIMHCE*SRWINGKDCRAHQG
Trigger: ACCCTGGTGAGCCCTGCAGTCCTTGCCGTTGATCCACCTGGAGCATTCACAGTGCATGATTAGGACCCCACCCCGAAGCCGCCATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS CCA 90 bp CGTGCTGGGCATGTGGTTCACGCGGGCAGGATTCAGCAGCTCCACTaGCTGGTCTCGGCCAGAAAGTCCATCTGGATGGCTTTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: RAGHVVHAGRIQQLH*LVSARKSIWMALGA
Trigger: AGCTCCCAAAGCCATCCAGATGGACTTTCTGGCCGAGACCAGCCAGTGGAGCTGCTGAATCCTGCCCGCGTGAACCACATGCCCAGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS CCA 90 bp GCCCAGCGTGATGTTGGGCAAGGATGGCGATGTGTAGAGGGGAAGTaGAGCGGCCGAGCCTTCTCGTGCCACAAGTCTGTGCGCCAAACT +
Preference number: 5 (lower is better)
Translates to: AQRDVGQGWRCVEGK*SGRAFSCHKSVRQT
Trigger: AGTTTGGCGCACAGACTTGTGGCACGAGAAGGCTCGGCCGCTCCACTTCCCCTCTACACATCGCCATCCTTGCCCAACATCACGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS-3UTR CAA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACATCTGCTGCTTCTGCTaGAGCGCCAGGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CAAHGGREQASGRLQCRYICCFC*SARSSC
Trigger: GCAGGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGAT...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACCGGTGCTGCCGCAGCTaGTGGATGGAGGGGGACACC +
Preference number: 5 (lower is better)
Translates to: WDAGVTRESFLAELQDRDRCCRS*WMEGDT
Trigger: GGTGTCCCCCTCCATCCACAAGCTGCGGCAGCACCG...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTTCCAGTTTCTGCCGGTaGAGGGGGTTCGTGCCATAC +
Preference number: 5 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPSSFCR*RGFVPY
Trigger: GTATGGCACGAACCCCCTCAACCGGCAGAAACTGGA...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCCGGTGAAAGCCATGTaGACGTTGAAACCCACGCCG +
Preference number: 5 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPPVKAM*TLKPTP
Trigger: CGGCGTGGGTTTCAACGTCAACATGGCTTTCACCGG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCCGGACAGCGTTTGCATaGGGTCTTTGCTGTAAAACC +
Preference number: 5 (lower is better)
Translates to: VPPADAEADPLPSALDACRTAFA*GLCCKT
Trigger: GGTTTTACAGCAAAGACCCAATGCAAACGCTGTCCG...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTCCCGCCTGCAGACGCCGAGGCAGATCCTCTGCCATCTGCCCTGGACGCTTGCTGGAACGGACAGCGTTaGCATTGGGTCTTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: VPPADAEADPLPSALDACWNGQR*HWVFAV
Trigger: TACAGCAAAGACCCAATGCAAACGCTGTCCGTTCCA...GCAAGCGTCCAGGGCAGATGGCAGAGGATCTGCCTCGGCGTCTGCAGGCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS GCA 90 bp CCCAGACCAGGCCCTCGAGGGCTCCTGTCCACCACCAGGCAGACTTaGCACTTGATAGACACCGCTCATTATGTGGGGAGGGAGGATTTC +
Preference number: 5 (lower is better)
Translates to: PRPGPRGLLSTTRQT*HLIDTAHYVGREDF
Trigger: GAAATCCTCCCTCCCCACATAATGAGCGGTGTCTATCAAGTGGCAAGTCTGCCTGGTGGTGGACAGGAGCCCTCGAGGGCCTGGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS CCA 90 bp CTTCGTTCTCGCAAGTCTGAGCCTCGATCAGAGAACGCCCCGCTGTaGAGGTTGTGCGCTGCAGGCAGCGCCAGTACTTGCTGTGGATCT +
Preference number: 5 (lower is better)
Translates to: LRSRKSEPRSENAPL*RLCAAGSASTCCGS
Trigger: AGATCCACAGCAAGTACTGGCGCTGCCTGCAGCGCACAACCTCCACAGCGGGGCGTTCTCTGATCGAGGCTCAGACTTGCGAGAACGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS CCA 90 bp CGGAAGCAGCCAGACCTAAGATCAAATCCAGGCTTGACGACAGACTaGGCTGGTGCCCTGGACAAGCGGTGGCTTCCAGAAGCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: RKQPDLRSNPGLTTD*AGALDKRWLPEAGG
Trigger: TCCCCCAGCTTCTGGAAGCCACCGCTTGTCCAGGGCACCAGCCCAGTCTGTCGTCAAGCCTGGATTTGATCTTAGGTCTGGCTGCTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS-3UTR CAA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACCAGGTAACCCACAAGTaGAACAGAGGCGTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CAAHGGREQASGRLQCRYQVTHK*NRGVRW
Trigger: CCAGCGGACGCCTCTGTTCAACTTGTGGGTTACCTG...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACCTCCCGGAGCTGTTGTaGGGTGAGCTGGGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: WDAGVTRESFLAELQDRDLPELL*GELGPE
Trigger: CTCCGGACCCAGCTCACCCAACAACAGCTCCGGGAG...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGCTTCCACGGCGTCCCTaGCGGGACCCGCCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKLPRRP*RDPPEC
Trigger: ACACTCTGGCGGGTCCCGCAAGGGACGCCGTGGAAG...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCCAGCTCGGCCGCCTGTaGCCACAGGCTCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PATALCHEWGMDQLLLPIQLGRL*PQAPFF
Trigger: GAAGAAAGGAGCCTGTGGCAACAGGCGGCCGAGCTG...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAAACTGTCCAAAGCTGCCGAGTTaGGCGTGCAAAATCTGTATA +
Preference number: 5 (lower is better)
Translates to: QASSRCQHCQARLATGNCPKLPS*ACKICI
Trigger: TATACAGATTTTGCACGCCAAACTCGGCAGCTTTGG...ACAGTTTCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTGGCTTTGGGAGCTCATaGCTAGCAATGTCCACTCCT +
Preference number: 5 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPGFGSS*LAMSTP
Trigger: AGGAGTGGACATTGCTAGCAATGAGCTCCCAAAGCC...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCAGGCCCAGCGTGATGTaGGGCAAGGATGGCGATGTG +
Preference number: 5 (lower is better)
Translates to: PATALCHEWGMDQLLLPIRPSVM*GKDGDV
Trigger: CACATCGCCATCCTTGCCCAACATCACGCTGGGCCT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGCCCGCCAGAGTGTGCTaGGCTTCCGCGTGTCCGTGT +
Preference number: 5 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRPARVC*ASACPC
Trigger: ACACGGACACGCGGAAGCCAAGCACACTCTGGCGGG...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGGCGTCAGGCCAGCTCGCGGTGCCAGCACTGCCAGGCTCGGCTGGCCACAGGAGGATTTGCCACTTTTTaGGAACTACCTCCATTTTTC +
Preference number: 5 (lower is better)
Translates to: RRQASSRCQHCQARLATGGFATF*ELPPFF
Trigger: GAAAAATGGAGGTAGTTCCAAAAAAGTGGCAAATCC...TCCTGTGGCCAGCCGAGCCTGGCAGTGCTGGCACCGCGAGCTGGCCTGACGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp CACAAATGTGGGCAATGTCTCTTTGATTCAATAGCGAGGCTGTGCTaGCAGAGTGGGGTCCACGCCTCCCCATCACAGCCGCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: HKCGQCLFDSIARLC*QSGVHASPSQPPPS
Trigger: GCTGGGAGGCGGCTGTGATGGGGAGGCGTGGACCCCACTCTGTCAGCACAGCCTCGCTATTGAATCAAAGAGACATTGCCCACATTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463007.5
CDS GCA 90 bp GCCTCCTCATTTAGTCATCATAGCCACTGGGGATGCAGGTGCCCCTaGAGCCTCATTCCACCCACATCCGGTGCACAGCACACACAGGAT +
Preference number: 5 (lower is better)
Translates to: ASSFSHHSHWGCRCP*SLIPPTSGAQHTQD
Trigger: ATCCTGTGTGTGCTGTGCACCGGATGTGGGTGGAATGAGGCTGCAGGGGCACCTGCATCCCCAGTGGCTATGATGACTAAATGAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463007.5
CDS GCA 90 bp AGAAGCTGGGGGAGCCCCTGGGCATCACGTGGAGATGAGAGAAGATaGTTCCAGAACCTGACACACAGTAGGGATCCGGAATCGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RSWGSPWASRGDERR*FQNLTHSRDPESPE
Trigger: CTCTGGCGATTCCGGATCCCTACTGTGTGTCAGGTTCTGGAAGCATCTTCTCTCATCTCCACGTGATGCCCAGGGGCTCCCCCAGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS-3UTR CAA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACACTCCCGGAGCTGTTGTaGGGTGAGCTGGGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTLPELL*GELGPE
Trigger: CTCCGGACCCAGCTCACCCAACAACAGCTCCGGGAG...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp AGTTGCTGCTGCTGGAACTGCTGCTTGTGTTTCTCCAGAAACTGCTaGTGCTGCTGCTGGATGACCAGGTGCTGCAGAGCCTGGGCGTTC +
Preference number: 5 (lower is better)
Translates to: SCCCWNCCLCFSRNC*CCCWMTRCCRAWAF
Trigger: GAACGCCCAGGCTCTGCAGCACCTGGTCATCCAGCAGCAGCATCAGCAGTTTCTGGAGAAACACAAGCAGCAGTTCCAGCAGCAGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS TCA 90 bp GGGGTTCTGGAGGTGAGACCTGGCCTCACCCTGAGATGGCAGCACTaGCCCCAACTCAAGTGTCTTCTTTATGTCTTCTGGCCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: GVLEVRPGLTLRWQH*PQLKCLLYVFWPPR
Trigger: CCTAGGAGGCCAGAAGACATAAAGAAGACACTTGAGTTGGGGTCAGTGCTGCCATCTCAGGGTGAGGCCAGGTCTCACCTCCAGAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS TCA 90 bp GGTCTTAGAAGCCGTGTCATAGGTTGCTCAGCTTCCACACGGTGCTaGCCAGGGCGATTGCAGGTCCATTGCAGGACGCCTCCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GLRSRVIGCSASTRC*PGRLQVHCRTPPSQ
Trigger: TTGAGAAGGAGGCGTCCTGCAATGGACCTGCAATCGCCCTGGTCAGCACCGTGTGGAAGCTGAGCAACCTATGACACGGCTTCTAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS GCA 90 bp CTTTCAGGCCCTTTACCTTATAACCTGGCAGGCGACACCCACAGGTaGCCCAGACACAAGGGGTTGAGAGCTGGAAACACAACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LSGPLPYNLAGDTHR*PRHKGLRAGNTTSG
Trigger: CCCTGAGGTTGTGTTTCCAGCTCTCAACCCCTTGTGTCTGGGGCACCTGTGGGTGTCGCCTGCCAGGTTATAAGGTAAAGGGCCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460235.1
CDS GCA 90 bp AATTCAGGAGGAAAGTCGACAGACAGAGACCTGGACAGCCAGTTCTaGACAGAGCAGTCTCCTATGGGAGTCTGGCCAGGGGAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: NSGGKSTDRDLDSQF*TEQSPMGVWPGEGG
Trigger: ACCTCCCTCCCCTGGCCAGACTCCCATAGGAGACTGCTCTGTGCAGAACTGGCTGTCCAGGTCTCTGTCTGTCGACTTTCCTCCTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS-3UTR CAA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTGCCGAGGGGGCCACTaGCAGAGGCAGCGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGECRGGH*QRQRRG
Trigger: GCCACGGCGCTGCCTCTGCAAGTGGCCCCCTCGGCA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GTGTCCGTGTGTCTGCGCGTCGCCGGCGTCTGTCCCGTGTTCCCTGTGAGGCTGACAGAGACTGTGGAGTaGTGGGTAATAAACTTTAAG +
Preference number: 5 (lower is better)
Translates to: VSVCLRVAGVCPVFPVRLTETVE*WVINFK
Trigger: CTTAAAGTTTATTACCCACAACTCCACAGTCTCTGT...CAGCCTCACAGGGAACACGGGACAGACGCCGGCGACGCGCAGACACACGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GCGTCCCTTGCGGGACCCGCCAGAGTGTGCTTGGCTTCCGCGTGTCCGTGTGTCGGATTTGCCACTTTTTaGGAACTACCTCCATTTTTC +
Preference number: 5 (lower is better)
Translates to: ASLAGPARVCLASACPCVGFATF*ELPPFF
Trigger: GAAAAATGGAGGTAGTTCCAAAAAAGTGGCAAATCC...GACACACGGACACGCGGAAGCCAAGCACACTCTGGCGGGTCCCGCAAGGGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGCGCAGCTCACGGCGGGCGCGAACAGGCATCAGGTAGGTTACAGTGTCGTTACTCACAAGCCATCCATTaGCAGGGACCTTCGCAATCT +
Preference number: 5 (lower is better)
Translates to: CAAHGGREQASGRLQCRYSQAIH*QGPSQS
Trigger: AGATTGCGAAGGTCCCTGCAAATGGATGGCTTGTGA...GTAACGACACTGTAACCTACCTGATGCCTGTTCGCGCCCGCCGTGAGCTGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGATCTGCCCTGGACGCTaGCTGTGGAGAAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKICPGR*LWRRAE
Trigger: CTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGAT...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTCCACAAGATAACACGTaGCGTGATGTGGTACAGAAT +
Preference number: 5 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCPQDNT*RDVVQN
Trigger: ATTCTGTACCACATCACGCAACGTGTTATCTTGTGG...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp CTGGAATGTGTGCACAGAGGAAAAGCTGCTACTTCAGGTGTCATGTaGAGCCGGGAGGCTCACCTGAAGGCCGCCAAGTACTCAGCGTCT +
Preference number: 5 (lower is better)
Translates to: LECVHRGKAATSGVM*SREAHLKAAKYSAS
Trigger: AGACGCTGAGTACTTGGCGGCCTTCAGGTGAGCCTCCCGGCTTCACATGACACCTGAAGTAGCAGCTTTTCCTCTGTGCACACATTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487617.5
CDS CCA 90 bp TACAGCCCTGGCTCAATTCAGGAGGAAAGTCGACAGACAGAGACCTaGACAGCCAGTTCTGCACAGAGCAGTCTCCTATGGGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: YSPGSIQEESRQTET*TASSAQSSLLWESG
Trigger: GCCAGACTCCCATAGGAGACTGCTCTGTGCAGAACTGGCTGTCCAGGTCTCTGTCTGTCGACTTTCCTCCTGAATTGAGCCAGGGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS-3UTR CAA 90 bp CCTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCATCTCCTGTTGTTGCTaGATGTGCTCGTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PATALCHEWGMDQLLLPIISCCC*MCSWSC
Trigger: GCAGCTCCACGAGCACATCAAGCAACAACAGGAGAT...GATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCAAAGCCATGTTGACGTaGAAACCCACGCCGGGCCCT +
Preference number: 5 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVKAMLT*KPTPGP
Trigger: AGGGCCCGGCGTGGGTTTCAACGTCAACATGGCTTT...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAATCTGCCCTGGACGCTaGCTGTGGAGAAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTICPGR*LWRRAE
Trigger: CTCGGCTCTTCTCCACAGCAAGCGTCCAGGGCAGAT...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CGCCGCACACCGCTATGGTTCACAGAGGCGGGCCACAGCCGTAGAAAACGTCCTCAGTGTCGTTACAACTaGGTTTTCTACCACATTCCG +
Preference number: 5 (lower is better)
Translates to: RRTPLWFTEAGHSRRKRPQCRYN*VFYHIP
Trigger: CGGAATGTGGTAGAAAACCAAGTTGTAACGACACTG...AGGACGTTTTCTACGGCTGTGGCCCGCCTCTGTGAACCATAGCGGTGTGCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS GCA 90 bp TCTTTCCTGCGTAACAGGGGGCTGCTCCGTCTTTCGGCCACTTTCTaGTTTAGCCTGGACCGTAATTTCAGATTCGGTTCAGAAGCGCGG +
Preference number: 5 (lower is better)
Translates to: SFLRNRGLLRLSATF*FSLDRNFRFGSEAR
Trigger: CCGCGCTTCTGAACCGAATCTGAAATTACGGTCCAGGCTAAAGCAGAAAGTGGCCGAAAGACGGAGCAGCCCCCTGTTACGCAGGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS-3UTR CAA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACGGCTTTGGGAGCTCATaGCTAGCAATGTCCACTCCT +
Preference number: 5 (lower is better)
Translates to: WDAGVTRESFLAELQDRDGFGSS*LAMSTP
Trigger: AGGAGTGGACATTGCTAGCAATGAGCTCCCAAAGCC...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGGGCCAGCATCTCCTGTaGTTGCTTGATGTGCTCGTG +
Preference number: 5 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRGQHLL*LLDVLV
Trigger: CACGAGCACATCAAGCAACAACAGGAGATGCTGGCC...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGCCACGGCACTCTCTTaGCCCTTCTCCTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVATALS*PFSLFL
Trigger: CAAGAACAAGGAGAAGGGCAAAGAGAGTGCCGTGGC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGGGCTGGTGCCCGTGCTaGAGGCGTCAGGCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKGWCPC*RRQASS
Trigger: CGAGCTGGCCTGACGCCTCAAGCACGGGCACCAGCC...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGTATGTGCATGAAGGCTaGGAGACGGGAGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRYVHEG*ETGAVL
Trigger: CAGAACCGCTCCCGTCTCCAAGCCTTCATGCACATA...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTCCCCCTGCCAGGCCTTaGCAGAGGGCGTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCPPARP*QRASPF
Trigger: AAATGGAGACGCCCTCTGCAAAGGCCTGGCAGGGGG...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CTGCCACTGCTCTGTGCCATGAATGGGGAATGGACCAGCTCCTCTTGCCAATCTGTGCCCCCAAGGCCTTaGCAAAGGAAGAAAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LPLLCAMNGEWTSSSCQSVPPRP*QRKKKA
Trigger: AGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCAC...AGATTGGCAAGAGGAGCTGGTCCATTCCCCATTCATGGCACAGAGCAGTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp AGGTTTATGGCCCAAATGGAAATGCGCCCATGTTTGCAGGGTTCTTaGCTTGGAGAGGACATGGCCGTGCTGATATGGCCCACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RFMAQMEMRPCLQGS*LGEDMAVLIWPTPA
Trigger: TGCTGGAGTGGGCCATATCAGCACGGCCATGTCCTCTCCAAGTCAAGAACCCTGCAAACATGGGCGCATTTCCATTTGGGCCATAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS GCA 90 bp CAGAAAGTCCATCTTCAGCCCAGACTTTCGCTTAATCCCGGAAACTaGTCCAAAGGCGTTTTTCTCAGGGCGTTCGGCGCCGTAACTCAG +
Preference number: 5 (lower is better)
Translates to: QKVHLQPRLSLNPGN*SKGVFLRAFGAVTQ
Trigger: CTGAGTTACGGCGCCGAACGCCCTGAGAAAAACGCCTTTGGAGCAGTTTCCGGGATTAAGCGAAAGTCTGGGCTGAAGATGGACTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446876.1
CDS-3UTR CAA 90 bp CAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGATCTCCTGTTGTTGCTaGATGTGCTCGTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QPVPPRPLQRKKKAKGPRISCCC*MCSWSC
Trigger: GCAGCTCCACGAGCACATCAAGCAACAACAGGAGAT...CCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGACGCTCCCGGAGCTGTaGTTGGGTGAGCTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGETLPEL*LGELGP
Trigger: CGGACCCAGCTCACCCAACAACAGCTCCGGGAGCGT...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTGTGACGAGGGGTGCTaGTGCCGGCGGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSCDEGC*CRRLLQ
Trigger: CTGGAGCAGCCGCCGGCACAAGCACCCCTCGTCACA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATAGGCAGCGCCAGTACTaGCTGTGGATCTCCATGACT +
Preference number: 5 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDRQRQY*LWISMT
Trigger: AGTCATGGAGATCCACAGCAAGTACTGGCGCTGCCT...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTGGCTTCCCGTGGCTGTaGCACGCTGGGTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSGFPWL*HAGCPW
Trigger: CCAGGGACACCCAGCGTGCAACAGCCACGGGAAGCC...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCGTGTGCCCCATGCATaGCTGACATGCTCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVRVPHA*LTCSKG
Trigger: ACCTTTTGAGCATGTCAGCAATGCATGGGGCACACG...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ATGTGCGTCTCGAGACCTGTGGGCCTGGGCGGCAGAAAGGCTTCCCGTGGCTGTAAACAACAAAGTCCATaGCTAGTGCTGCAAAAATCA +
Preference number: 5 (lower is better)
Translates to: MCVSRPVGLGGRKASRGCKQQSP*LVLQKS
Trigger: TGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT...ACAGCCACGGGAAGCCTTTCTGCCGCCCAGGCCCACAGGTCTCGAGACGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp ACAGAATACAGAAGCACGCATCCTACCCGCACCATACTCGTGGCCTaGTGTGAGCAGATTACTGCCACAGACTTCGAAGGGGATGAGATG +
Preference number: 5 (lower is better)
Translates to: TEYRSTHPTRTILVA*CEQITATDFEGDEM
Trigger: CATCTCATCCCCTTCGAAGTCTGTGGCAGTAATCTGCTCACATCAGGCCACGAGTATGGTGCGGGTAGGATGCGTGCTTCTGTATTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CCA 90 bp ACTCTAGGGTCCCAGCAACCCCAGCTATTACAATCACACTGTCACTaGGTGAACGCTGTGCACTCTACAGGGGCCTCCTCATTTAGTCAT +
Preference number: 5 (lower is better)
Translates to: TLGSQQPQLLQSHCH*VNAVHSTGASSFSH
Trigger: ATGACTAAATGAGGAGGCCCCTGTAGAGTGCACAGCGTTCACCCAGTGACAGTGTGATTGTAATAGCTGGGGTTGCTGGGACCCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463007.5
CDS CCA 90 bp AACCTTGAACTTCTTTCTGTGCTTTTGAGACCCTGGCCCAGAGACTaGCTCCAGAGCCATGGTTCTAAGGTCTCTGGCCATCTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: NLELLSVLLRPWPRD*LQSHGSKVSGHLSE
Trigger: CTCTGAGAGATGGCCAGAGACCTTAGAACCATGGCTCTGGAGCCAGTCTCTGGGCCAGGGTCTCAAAAGCACAGAAAGAAGTTCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS-3UTR CAA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTCAGGTAACCCACAAGTaGAACAGAGGCGTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCQVTHK*NRGVRW
Trigger: CCAGCGGACGCCTCTGTTCAACTTGTGGGTTACCTG...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCGATCGTAACACTGCAAGTGTGCCTACCACATGCTTCACGACCAGATGGAGATAGAGGGAAGTCATCTTaGGCGTCGTACATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PIVTLQVCLPHASRPDGDRGKSS*ASYIPR
Trigger: CCTGGGAATGTACGACGCCAAAGATGACTTCCCTCT...ATCTCCATCTGGTCGTGAAGCATGTGGTAGGCACACTTGCAGTGTTACGATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTGCTGGCTCGCTTGGCTaGGGGATGATCTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCAGSLG*GMILFI
Trigger: GATGAACAAGATCATCCCCAAGCCAAGCGAGCCAGC...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTACTCCAGCAGGAGGGCTaGCTGTCTGAAGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLLQQEG*LSEEQL
Trigger: GAGCTGCTCTTCAGACAGCAAGCCCTCCTGCTGGAG...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGCCCGCCAGAGTGTGCTaGGCTTCCGCGTGTCCGTGT +
Preference number: 5 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQPARVC*ASACPC
Trigger: ACACGGACACGCGGAAGCCAAGCACACTCTGGCGGG...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGTCACAAGCCATCCATTaGCAGGGACCTTCGCAATCT +
Preference number: 5 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKSQAIH*QGPSQS
Trigger: AGATTGCGAAGGTCCCTGCAAATGGATGGCTTGTGA...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS GCA 90 bp TCTTTCCTGCGTAACAGGGGGCTGCTCCGTCTTTCGGCCACTTTCTaGTTTAGCCTGGACCGTAATTTCAGATTCGGTTCAGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SFLRNRGLLRLSATF*FSLDRNFRFGSEAV
Trigger: AACAGCTTCTGAACCGAATCTGAAATTACGGTCCAGGCTAAAGCAGAAAGTGGCCGAAAGACGGAGCAGCCCCCTGTTACGCAGGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 90 bp CAGTTTCAGACACGCTCATCTCCAACAAGTGCTTCCTGGAATGTGTaGACAGAGGAAAAGCTGCTACTTCAGGTGTCATGTGAAGCCGGG +
Preference number: 5 (lower is better)
Translates to: QFQTRSSPTSASWNV*TEEKLLLQVSCEAG
Trigger: CCCGGCTTCACATGACACCTGAAGTAGCAGCTTTTCCTCTGTGCACACATTCCAGGAAGCACTTGTTGGAGATGAGCGTGTCTGAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487617.5
CDS GCA 90 bp CCGTTCAGCCACAGACCAGTTTCAGACACGCTCATCTCCAACAAGTaGTTCCTGGAATGTGTGCACAGAGGAAAAGCTGCTACTTCAGGT +
Preference number: 5 (lower is better)
Translates to: PFSHRPVSDTLISNK*FLECVHRGKAATSG
Trigger: ACCTGAAGTAGCAGCTTTTCCTCTGTGCACACATTCCAGGAAGCACTTGTTGGAGATGAGCGTGTCTGAAACTGGTCTGTGGCTGAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487617.5
CDS GCA 90 bp CCTGATGTGAGCAGATTACTGCCACAGACTTCGAAGGGGATGAGATaGTGGCTGCATACAGGATCCTGTTTCTTAAAGCGAGAGCCACTG +
Preference number: 5 (lower is better)
Translates to: PDVSRLLPQTSKGMR*WLHTGSCFLKREPL
Trigger: CAGTGGCTCTCGCTTTAAGAAACAGGATCCTGTATGCAGCCAGCATCTCATCCCCTTCGAAGTCTGTGGCAGTAATCTGCTCACATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS GCA 90 bp CTAATCATGCACTGTGAATGCTCCAGGTGGATCAACGGCAAGGACTaGAGGGCTCACCAGGGTGCAGTGACAACAGGAAAAATGGAATTC +
Preference number: 5 (lower is better)
Translates to: LIMHCECSRWINGKD*RAHQGAVTTGKMEF
Trigger: GAATTCCATTTTTCCTGTTGTCACTGCACCCTGGTGAGCCCTGCAGTCCTTGCCGTTGATCCACCTGGAGCATTCACAGTGCATGATTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS GCA 90 bp TCTTTCCTGCGTAACAGGGGGCTGCTCCGTCTTTCGGCCACTTTCTaGTTTAGCCTGGACCGTAATTTCAGATTCGGTTCAGAAGCTCTA +
Preference number: 5 (lower is better)
Translates to: SFLRNRGLLRLSATF*FSLDRNFRFGSEAL
Trigger: TAGAGCTTCTGAACCGAATCTGAAATTACGGTCCAGGCTAAAGCAGAAAGTGGCCGAAAGACGGAGCAGCCCCCTGTTACGCAGGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553145.1
CDS CCA 90 bp GATGTGAGCAGATTACTGCCACAGACTTCGAAGGGGATGAGATGCTaGCTGCATACAGGATCCTGTTTCTTAAAGCGAGAGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: DVSRLLPQTSKGMRC*LHTGSCFLKREPLH
Trigger: GTGCAGTGGCTCTCGCTTTAAGAAACAGGATCCTGTATGCAGCCAGCATCTCATCCCCTTCGAAGTCTGTGGCAGTAATCTGCTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS-3UTR CAA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGATCTGCTGCTTCTGCTaGAGCGCCAGGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGEICCFC*SARSSC
Trigger: GCAGGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGAT...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTCCCTTCTCCTTGTTCTaGAGCTGCTGCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCPFSLF*SCCSFC
Trigger: GCAGAAGCTGCAGCAGCTCAAGAACAAGGAGAAGGG...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACATGCTGGAACTGCTGCTaGTGTTTCTCCAGAAACTGC +
Preference number: 5 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTCWNCC*CFSRNC
Trigger: GCAGTTTCTGGAGAAACACAAGCAGCAGTTCCAGCA...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCACACGGGAAAGTTTCTaGGCTGAGCTTCAAGACAGA +
Preference number: 5 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVTRESF*AELQDR
Trigger: TCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGT...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTATGGACCAGCTCCTCTaGCCAATCTGGGCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCMDQLL*PIWASE
Trigger: CTCTGAAGCCCAGATTGGCAAGAGGAGCTGGTCCAT...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCCCCCTGCCAGGCCTTaGCAGAGGGCGTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSPPARP*QRASPF
Trigger: AAATGGAGACGCCCTCTGCAAAGGCCTGGCAGGGGG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp CTGTACTATGCACATACCCTATCACAAATGTGGGCAATGTCTCTTTaGTTCAATAGCGAGGCTGTGCTGACAGAGTGGGGTCCACGCCTC +
Preference number: 5 (lower is better)
Translates to: LYYAHTLSQMWAMSL*FNSEAVLTEWGPRL
Trigger: GAGGCGTGGACCCCACTCTGTCAGCACAGCCTCGCTATTGAATCAAAGAGACATTGCCCACATTTGTGATAGGGTATGTGCATAGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463007.5
CDS TCA 90 bp AACTCAAGTGTCTTCTTTATGTCTTCTGGCCTCCTAGGACTACCTTaGGGAGCCCCAGTCAAACACACGGGGCTTAGGCTTACTTCTCAG +
Preference number: 5 (lower is better)
Translates to: NSSVFFMSSGLLGLP*GAPVKHTGLRLTSQ
Trigger: CTGAGAAGTAAGCCTAAGCCCCGTGTGTTTGACTGGGGCTCCTCAAGGTAGTCCTAGGAGGCCAGAAGACATAAAGAAGACACTTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS-3UTR CAA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTTCTTTGCCCTTCTCCTaGTTCTTGAGCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCSLPFS*FLSCCS
Trigger: GCTGCAGCAGCTCAAGAACAAGGAGAAGGGCAAAGA...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGTCCTCCAGGGTGGCCTaGCGTCCGCGGATGCACTCG +
Preference number: 5 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQSSRVA*RPRMHS
Trigger: CGAGTGCATCCGCGGACGCAAGGCCACCCTGGAGGA...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGTGTCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTCCAGTTTCTGCCGGTaGAGGGGGTTCGTGCCATAC +
Preference number: 5 (lower is better)
Translates to: SVVTTWFSTTFRKKLLGESSFCR*RGFVPY
Trigger: GTATGGCACGAACCCCCTCAACCGGCAGAAACTGGA...CTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp GGGCTTCTTTATACAGCTCCTAGGACAGACCAGGAAAGACACAATCGTTGGTGTGTGCCCCCAAGGCCTTaGCAAAGGAAGAAAAAGGCT +
Preference number: 5 (lower is better)
Translates to: GLLYTAPRTDQERHNRWCVPPRP*QRKKKA
Trigger: AGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCAC...ACACCAACGATTGTGTCTTTCCTGGTCTGTCCTAGGAGCTGTATAAAGAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AGACGCCAAGAGGCCCAGTGGCGTCATCAGGGTTTCCCTCAAAGGGATATAAAGCAGTGTCGTTACAACTaGGTTTTCTACCACATTCCG +
Preference number: 5 (lower is better)
Translates to: RRQEAQWRHQGFPQRDIKQCRYN*VFYHIP
Trigger: CGGAATGTGGTAGAAAACCAAGTTGTAACGACACTG...CTTTATATCCCTTTGAGGGAAACCCTGATGACGCCACTGGGCCTCTTGGCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS GCA 90 bp TCCATGACTTTCTCCATGGAACGGACAGCGTTTGCATTGGGTCTTTaGTGTAAAACCTTTTCTGGGAGAGGATCAAGCTCGTTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SMTFSMERTAFALGL*CKTFSGRGSSSFPS
Trigger: GCTGGGAAACGAGCTTGATCCTCTCCCAGAAAAGGTTTTACAGCAAAGACCCAATGCAAACGCTGTCCGTTCCATGGAGAAAGTCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS-3UTR CAA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAAGAGGGAAGTCATCTTaGGCGTCGTACATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLRGKSS*ASYIPR
Trigger: CCTGGGAATGTACGACGCCAAAGATGACTTCCCTCT...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TATAAAGTCATGCCGGTCGTACAGTCCATGCAACCTCCAGGTGTAGGAAACTTAGGCTTGGGGATGATCTaGTTCATCTGCAGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: YKVMPVVQSMQPPGVGNLGLGMI*FICSCC
Trigger: GCAGCAACTGCAGATGAACAAGATCATCCCCAAGCC...TAAGTTTCCTACACCTGGAGGTTGCATGGACTGTACGACCGGCATGACTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGCCTACCACATGCTTCACGACCAGATGGAGATGCTCAATCGTATGTGACGTGTGGAAAGACACAATCGTaGGTGTCACTCCGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: CLPHASRPDGDAQSYVTCGKTQS*VSLRKD
Trigger: GTCTTTTCGGAGTGACACCAACGATTGTGTCTTTCC...ACACGTCACATACGATTGAGCATCTCCATCTGGTCGTGAAGCATGTGGTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGGGCCAGCATCTCCTGTaGTTGCTTGATGTGCTCGTG +
Preference number: 5 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQGQHLL*LLDVLV
Trigger: CACGAGCACATCAAGCAACAACAGGAGATGCTGGCC...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACGTAATACTACTAGTGTaGAAAGTTAAAAAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: WDAGVTRESFLAELQDRDVILLV*KVKKSP
Trigger: GGGGCTCTTTTTAACTTTCAACACTAGTAGTATTAC...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGATGGACCAGCTCCTCTaGCCAATCTGGGCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQMDQLL*PIWASE
Trigger: CTCTGAAGCCCAGATTGGCAAGAGGAGCTGGTCCAT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGGGACGCAGGCGTGACACGGGAAAGTTTCTTGGCTGAGCTTCAAGACAGAGACAAACAACAAAGTCCATaGCTAGTGCTGCAAAAATCA +
Preference number: 5 (lower is better)
Translates to: WDAGVTRESFLAELQDRDKQQSP*LVLQKS
Trigger: TGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT...GTCTCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCCAAGGACCCACAACAGAGACTGTGGAGTaGTGGGTAATAAACTTTAAG +
Preference number: 5 (lower is better)
Translates to: CPQGLCKGRKRLKVQGPTTETVE*WVINFK
Trigger: CTTAAAGTTTATTACCCACAACTCCACAGTCTCTGT...TGTGGGTCCTTGGACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp ACTCCCAGCCAGTGCCCCCAAGGCCTTTGCAAAGGAAGAAAAAGGCTAAAGGTCGTAATACTACTAGTGTaGAAAGTTAAAAAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: TPSQCPQGLCKGRKRLKVVILLV*KVKKSP
Trigger: GGGGCTCTTTTTAACTTTCAACACTAGTAGTATTAC...GACCTTTAGCCTTTTTCTTCCTTTGCAAAGGCCTTGGGGGCACTGGCTGGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp GGATGGCTTTGGGAGCTCATTGCTAGCAATGTCCACTCCTTTAAGTaGTTCGAAATGGCTCAAAATTTCCACGGAAACGATAGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GWLWELIASNVHSFK*FEMAQNFHGNDSSN
Trigger: GTTGGAGCTATCGTTTCCGTGGAAATTTTGAGCCATTTCGAATCACTTAAAGGAGTGGACATTGCTAGCAATGAGCTCCCAAAGCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS-3UTR CAA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTGGAACGGACAGCGTTaGCATTGGGTCTTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSWNGQR*HWVFAV
Trigger: TACAGCAAAGACCCAATGCAAACGCTGTCCGTTCCA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp CCATTCTCAGTAGAAGCATCAGTAAGAACCACAGGCTCACACCCATaGAACAAAGCAGCAGAAGCTCTAGGTTCACTTTTCCCAATAAAG +
Preference number: 5 (lower is better)
Translates to: PFSVEASVRTTGSHP*NKAAEALGSLFPIK
Trigger: CTTTATTGGGAAAAGTGAACCTAGAGCTTCTGCTGCTTTGTTTCATGGGTGTGAGCCTGTGGTTCTTACTGATGCTTCTACTGAGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS-3UTR CAA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGACACGGGAAAGTTTCTaGGCTGAGCTTCAAGACAGA +
Preference number: 5 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQTRESF*AELQDR
Trigger: TCTGTCTTGAAGCTCAGCCAAGAAACTTTCCCGTGT...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTCCAAAGCTGCCGAGTTaGGCGTGCAAAATCTGTATA +
Preference number: 5 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSPKLPS*ACKICI
Trigger: TATACAGATTTTGCACGCCAAACTCGGCAGCTTTGG...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AACTGGTGGCTTCATGTGCTGGAAAATAAGTTACCAGTAAAACGTGACTGTCAGCAGAAGAGGATATCATaGGTCGGTGAAAATCCACCC +
Preference number: 5 (lower is better)
Translates to: NWWLHVLENKLPVKRDCQQKRIS*VGENPP
Trigger: GGGTGGATTTTCACCGACCAATGATATCCTCTTCTG...CTGACAGTCACGTTTTACTGGTAACTTATTTTCCAGCACATGAAGCCACCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS TCA 90 bp TGGCAGCAATTATTCACTTTGAGGGAAGCAAGGCTGCGATTTCTGTaGCCACTGGGACTCGAGAAGAAACAGGACATTATTTACACATTA +
Preference number: 5 (lower is better)
Translates to: WQQLFTLREARLRFL*PLGLEKKQDIIYTL
Trigger: TAATGTGTAAATAATGTCCTGTTTCTTCTCGAGTCCCAGTGGTCACAGAAATCGCAGCCTTGCTTCCCTCAAAGTGAATAATTGCTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493582.5
ENST00000535493.5
CDS-3UTR CAA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCGTGTGCCCCATGCATaGCTGACATGCTCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQRVPHA*LTCSKG
Trigger: ACCTTTTGAGCATGTCAGCAATGCATGGGGCACACG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGTGCTGGAACTGCTGCTaGTGTTTCTCCAGAAACTGC +
Preference number: 5 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQCWNCC*CFSRNC
Trigger: GCAGTTTCTGGAGAAACACAAGCAGCAGTTCCAGCA...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp CCCAGTGACCAAGTGAATCCAAGAATCTGCACTCATTTGGTCAAAAGTTTGAGTTGTCATTCTCATCAATaGGAAAATAGCGCCTCCACT +
Preference number: 5 (lower is better)
Translates to: PSDQVNPRICTHLVKSLSCHSHQ*ENSAST
Trigger: AGTGGAGGCGCTATTTTCCAATTGATGAGAATGACA...ACTCAAACTTTTGACCAAATGAGTGCAGATTCTTGGATTCACTTGGTCACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp TCGTTACAACTTGGTTTTCTACCACATTCCGTAAGAAGCTCTTGGGTGAGTAAGTGTCATTCTCATCAATaGGAAAATAGCGCCTCCACT +
Preference number: 5 (lower is better)
Translates to: SLQLGFLPHSVRSSWVSKCHSHQ*ENSAST
Trigger: AGTGGAGGCGCTATTTTCCAATTGATGAGAATGACA...CTTACTCACCCAAGAGCTTCTTACGGAATGTGGTAGAAAACCAAGTTGTAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS-3UTR CAA 90 bp AAACAACAAAGTCCATTGCTAGTGCTGCAAAAATCAAACTTGCTTTTGTGTCAGCCACAAGATAACACGTaGCGTGATGTGGTACAGAAT +
Preference number: 5 (lower is better)
Translates to: KQQSPLLVLQKSNLLLCQPQDNT*RDVVQN
Trigger: ATTCTGTACCACATCACGCAACGTGTTATCTTGTGG...CTGACACAAAAGCAAGTTTGATTTTTGCAGCACTAGCAATGGACTTTGTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000543185.6
CDS CCA 72 bp TGGAGGGCGGGAAGGGTGAGTCTCTCGGCGTCCTGCTaGCCCGCCGTGCCCGCAGAGGGGCCGGTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: WRAGRVSLSASC*PAVPAEGPVAG
Trigger: GCCTGCCACCGGCCCCTCTGCGGGCACGGCGGGCCAGCAGGACGCCGAGAGACTCACCCTTCCCGCCCTCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS GCA 72 bp TGCTGGAGGGCGGGAAGGGTGAGTCTCTCGGCGTCCTaGTGGCCCGCCGTGCCCGCAGAGGGGCCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: CWRAGRVSLSAS*WPAVPAEGPVA
Trigger: TGCCACCGGCCCCTCTGCGGGCACGGCGGGCCAGCAGGACGCCGAGAGACTCACCCTTCCCGCCCTCCAGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS CAA 72 bp AGACGCTCCAGGCGCCAGCCGCTGGGTGCTTCGCGGTaGAGGAGGCGCAGGGACCGGGGGCCAGTAGTGGCC +
Preference number: 6 (lower is better)
Translates to: RRSRRQPLGASR*RRRRDRGPVVA
Trigger: GGCCACTACTGGCCCCCGGTCCCTGCGCCTCCTCAACCGCGAAGCACCCAGCGGCTGGCGCCTGGAGCGTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CCA 72 bp TGCTGGATGACCAGGTGCTGCAGAGCCTGGGCGTTCTaGGGCAGCGGGGCCGACTGGGTCCGCCCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: CWMTRCCRAWAF*GSGADWVRPSG
Trigger: CCCACTGGGGCGGACCCAGTCGGCCCCGCTGCCCCAGAACGCCCAGGCTCTGCAGCACCTGGTCATCCAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS TCA 72 bp GGAAAAGGGAGAGCCTCTGCTGGAGGGCGGGAAGGGTaGGTCTCTCGGCGTCCTGCTGGCCCGCCGTGCCCG +
Preference number: 6 (lower is better)
Translates to: GKGRASAGGREG*VSRRPAGPPCP
Trigger: CGGGCACGGCGGGCCAGCAGGACGCCGAGAGACTCACCCTTCCCGCCCTCCAGCAGAGGCTCTCCCTTTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS CAA 72 bp GACTGGGTCCGCCCCAGTGGGCGGTGCTGCCGCAGCTaGTGGATGGAGGGGGACACCCGGTCTGCACCAACC +
Preference number: 6 (lower is better)
Translates to: DWVRPSGRCCRS*WMEGDTRSAPT
Trigger: GGTTGGTGCAGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAGCACCGCCCACTGGGGCGGACCCAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CAA 90 bp CTGGTGGTCCAGGCGCAGGTCCATGGGCACTGCCGAGGGGGCCACTaGCAGAGGCAGCGCCGTGGCCACATCCACCGTGCTGGGCATGTG +
Preference number: 6 (lower is better)
Translates to: LVVQAQVHGHCRGGH*QRQRRGHIHRAGHV
Trigger: CACATGCCCAGCACGGTGGATGTGGCCACGGCGCTGCCTCTGCAAGTGGCCCCCTCGGCAGTGCCCATGGACCTGCGCCTGGACCACCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS CAA 90 bp CTGGTGGTCCAGGCGCAGGTCCATGGGCACTGCCGAGGGGGCCACTaGCAGAGGCAGCGCCGTGGCCACATCCATCTGAGCCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: LVVQAQVHGHCRGGH*QRQRRGHIHLSQHC
Trigger: GCAGTGCTGGCTCAGATGGATGTGGCCACGGCGCTGCCTCTGCAAGTGGCCCCCTCGGCAGTGCCCATGGACCTGCGCCTGGACCACCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454542.5
CDS TCA 72 bp CTGCTGCTCCCGCAGGGCCGGCTCTGCCACAGGCAGTaGGAACTGGTGGTCCAGGCGCAGGTCCATGGGCAC +
Preference number: 6 (lower is better)
Translates to: LLLPQGRLCHRQ*ELVVQAQVHGH
Trigger: GTGCCCATGGACCTGCGCCTGGACCACCAGTTCTCACTGCCTGTGGCAGAGCCGGCCCTGCGGGAGCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS TCA 72 bp TGCTGGGGACGGCGGGCGCGATACCGTTCTCCGCGCTaGCGCTCCCGGAGCTGTTGTTGGGTGAGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: CWGRRARYRSPR*RSRSCCWVSWV
Trigger: GACCCAGCTCACCCAACAACAGCTCCGGGAGCGTCAGCGCGGAGAACGGTATCGCGCCCGCCGTCCCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS GCA 72 bp GGGACAGAGGCCTGTGGCCGCCGAAGGACACGGGGATaGCGGCGGCCTCCATGGACGCCTGGTAGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: GTEACGRRRTRG*RRPPWTPGSSS
Trigger: TGAGGAACTACCAGGCGTCCATGGAGGCCGCCGGCATCCCCGTGTCCTTCGGCGGCCACAGGCCTCTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp ATGAACCAAAAGACGCTCCAGGCGCCAGCCGCTGGGTaGTTCGCGGTTGAGGAGGCGCAGGGACCGGGGGCC +
Preference number: 6 (lower is better)
Translates to: MNQKTLQAPAAG*FAVEEAQGPGA
Trigger: GGCCCCCGGTCCCTGCGCCTCCTCAACCGCGAAGCACCCAGCGGCTGGCGCCTGGAGCGTCTTTTGGTTCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CCA 72 bp GCACTGCCGAGGGGGCCACTTGCAGAGGCAGCGCCGTaGCCACATCCACCGTGCTGGGCATGTGGTTCACGC +
Preference number: 6 (lower is better)
Translates to: ALPRGPLAEAAP*PHPPCWACGSR
Trigger: GCGTGAACCACATGCCCAGCACGGTGGATGTGGCCACGGCGCTGCCTCTGCAAGTGGCCCCCTCGGCAGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp TCCCGCAGGGCCGGCTCTGCCACAGGCAGTGAGAACTaGTGGTCCAGGCGCAGGTCCATGGGCACTGCCGAG +
Preference number: 6 (lower is better)
Translates to: SRRAGSATGSEN*WSRRRSMGTAE
Trigger: CTCGGCAGTGCCCATGGACCTGCGCCTGGACCACCAGTTCTCACTGCCTGTGGCAGAGCCGGCCCTGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp TGGGTCCGCCCCAGTGGGCGGTGCTGCCGCAGCTTGTaGATGGAGGGGGACACCCGGTCTGCACCAACCAAG +
Preference number: 6 (lower is better)
Translates to: WVRPSGRCCRSL*MEGDTRSAPTK
Trigger: CTTGGTTGGTGCAGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAGCACCGCCCACTGGGGCGGACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp TGTCTGAAGAGCAGCTCCTGCTCACTGGGCTGGCGCTaGCCCGGCTCCACCTCCCGTGGGGGCTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: CLKSSSCSLGWR*PGSTSRGGSAS
Trigger: AGAGGCAGAGCCCCCACGGGAGGTGGAGCCGGGCCAGCGCCAGCCCAGTGAGCAGGAGCTGCTCTTCAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp TGGATCTGCTGCTTCTGCTTGAGCGCCAGGAGCTCCTaGTGCAGCTGCTGCTCCCGCAGGGCCGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: WICCFCLSARSS*CSCCSRRAGSA
Trigger: GGCAGAGCCGGCCCTGCGGGAGCAGCAGCTGCAGCAGGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp CCGAGTGCACCGTCTGTAGCTCCTCCAGGGTGGCCTTaGGTCCGCGGATGCACTCGCATTTGCCCCGGAGGC +
Preference number: 6 (lower is better)
Translates to: PSAPSVAPPGWP*VRGCTRICPGG
Trigger: GCCTCCGGGGCAAATGCGAGTGCATCCGCGGACGCAAGGCCACCCTGGAGGAGCTACAGACGGTGCACTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345617.7
ENST00000460235.1
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp TTGGGGCTCCTAAGCAGGAGCCAGGCGTGTCCACCCTaGCTCTCCCTTCCCCAGACCAGGCCCTCGAGGGCT +
Preference number: 6 (lower is better)
Translates to: LGLLSRSQACPP*LSLPQTRPSRA
Trigger: AGCCCTCGAGGGCCTGGTCTGGGGAAGGGAGAGGCAGGGTGGACACGCCTGGCTCCTGCTTAGGAGCCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS CCA 72 bp CAGGCAGTGAGAACTGGTGGTCCAGGCGCAGGTCCATaGGCACTGCCGAGGGGGCCACTTGCAGAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: QAVRTGGPGAGP*ALPRGPLAEAA
Trigger: CGCTGCCTCTGCAAGTGGCCCCCTCGGCAGTGCCCATGGACCTGCGCCTGGACCACCAGTTCTCACTGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp GTGAGGTGGGTGCCGGGGAAAAGGGAGAGCCTCTGCTaGAGGGCGGGAAGGGTGAGTCTCTCGGCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: VRWVPGKRESLC*RAGRVSLSASC
Trigger: GCAGGACGCCGAGAGACTCACCCTTCCCGCCCTCCAGCAGAGGCTCTCCCTTTTCCCCGGCACCCACCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS CCA 72 bp TCCGCCCCAGTGGGCGGTGCTGCCGCAGCTTGTGGATaGAGGGGGACACCCGGTCTGCACCAACCAAGGACT +
Preference number: 6 (lower is better)
Translates to: SAPVGGAAAACG*RGTPGLHQPRT
Trigger: AGTCCTTGGTTGGTGCAGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAGCACCGCCCACTGGGGCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp CATGCTTCCGAGGCGTCGCAAATGGCGGTCAGGTCGTaGCCTCCCTCGAGGGCCAGGACAATCCGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: HASEASQMAVRS*PPSRARTIRPP
Trigger: TGGCGGCCGGATTGTCCTGGCCCTCGAGGGAGGCCACGACCTGACCGCCATTTGCGACGCCTCGGAAGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000494800.1
ENST00000543185.6
CDS CCA 72 bp GCACTGCCGAGGGGGCCACTTGCAGAGGCAGCGCCGTaGCCACATCCATCTGAGCCAGCACTGCTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: ALPRGPLAEAAP*PHPSEPALLLA
Trigger: TGCCAGGAGCAGTGCTGGCTCAGATGGATGTGGCCACGGCGCTGCCTCTGCAAGTGGCCCCCTCGGCAGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454542.5
CDS GCA 72 bp ATCTGCTGCTTCTGCTTGAGCGCCAGGAGCTCCTGCTaGAGCTGCTGCTCCCGCAGGGCCGGCTCTGCCACA +
Preference number: 6 (lower is better)
Translates to: ICCFCLSARSSC*SCCSRRAGSAT
Trigger: TGTGGCAGAGCCGGCCCTGCGGGAGCAGCAGCTGCAGCAGGAGCTCCTGGCGCTCAAGCAGAAGCAGCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000496347.1
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp AGTGGAGCGGCCGAGCCTTCTCGTGCCACAAGTCTGTaGGCCAAACTCGTCTCCGCCGGGATGCTGGGGACG +
Preference number: 6 (lower is better)
Translates to: SGAAEPSRATSL*AKLVSAGMLGT
Trigger: CGTCCCCAGCATCCCGGCGGAGACGAGTTTGGCGCACAGACTTGTGGCACGAGAAGGCTCGGCCGCTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS GCA 72 bp GGTGCTTGTGCCGGCGGCTGCTCCAGTAAGACCATGTaGTGCAGAAGAGGGCTGTGCGCTGCCCCTCCGTCC +
Preference number: 6 (lower is better)
Translates to: GACAGGCSSKTM*CRRGLCAAPPS
Trigger: GGACGGAGGGGCAGCGCACAGCCCTCTTCTGCAGCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345617.7
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp CTGCCGCAGCTTGTGGATGGAGGGGGACACCCGGTCTaGACCAACCAAGGACTGTGCGTGGAGGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: LPQLVDGGGHPV*TNQGLCVEGQC
Trigger: GCACTGCCCCTCCACGCACAGTCCTTGGTTGGTGCAGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp GCCAGGACAATCCGGCCGCCAGCCAGGCCCATCAGCTaGTTCGTCAGGTACCCGAAGCATCTGGCGGAGAGG +
Preference number: 6 (lower is better)
Translates to: ARTIRPPARPIS*FVRYPKHLAER
Trigger: CCTCTCCGCCAGATGCTTCGGGTACCTGACGAAGCAGCTGATGGGCCTGGCTGGCGGCCGGATTGTCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000494800.1
ENST00000543185.6
CDS GCA 72 bp TGTTGTTGGGTGAGCTGGGTCCGGAGCCTGGGGCGCTaGTGCACGCGGAGTGTGGTATCCACGCCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: CCWVSWVRSLGR*CTRSVVSTPAG
Trigger: TCCAGCAGGCGTGGATACCACACTCCGCGTGCAGCAGCGCCCCAGGCTCCGGACCCAGCTCACCCAACAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445704.1
CDS GCA 72 bp AGGCAGCGCCGTGGCCACATCCATCTGAGCCAGCACTaGTCCTGGCACAGCCCAGGGACATCCCAGCGTCAC +
Preference number: 6 (lower is better)
Translates to: RQRRGHIHLSQH*SWHSPGTSQRH
Trigger: GTGACGCTGGGATGTCCCTGGGCTGTGCCAGGAGCAGTGCTGGCTCAGATGGATGTGGCCACGGCGCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454542.5
CDS CCA 72 bp GGGCTTCCGAGTGCACCGTCTGTAGCTCCTCCAGGGTaGCCTTGCGTCCGCGGATGCACTCGCATTTGCCCC +
Preference number: 6 (lower is better)
Translates to: GLPSAPSVAPPG*PCVRGCTRICP
Trigger: GGGGCAAATGCGAGTGCATCCGCGGACGCAAGGCCACCCTGGAGGAGCTACAGACGGTGCACTCGGAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345617.7
ENST00000460235.1
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp ACAGCCGCCTCCCAGCCTGATGAGAGGGAGACGGAGTaGGCGGCCCCTCCCCACACTGGGAATCTATGGCAG +
Preference number: 6 (lower is better)
Translates to: TAASQPDERETE*AAPPHTGNLWQ
Trigger: CTGCCATAGATTCCCAGTGTGGGGAGGGGCCGCCCACTCCGTCTCCCTCTCATCAGGCTGGGAGGCGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463007.5
CDS CAA 72 bp TCCGAGTGCACCGTCTGTAGCTCCTCCAGGGTGGCCTaGCGTCCGCGGATGCACTCGCATTTGCCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: SECTVCSSSRVA*RPRMHSHLPRR
Trigger: CCTCCGGGGCAAATGCGAGTGCATCCGCGGACGCAAGGCCACCCTGGAGGAGCTACAGACGGTGCACTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345617.7
ENST00000460235.1
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp CCCAGGCCTGTGACGAGGGGTGCTTGTGCCGGCGGCTaGTCCAGTAAGACCATGTGCTGCAGAAGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: PRPVTRGACAGG*SSKTMCCRRGL
Trigger: CAGCCCTCTTCTGCAGCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGCACCCCTCGTCACAGGCCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345617.7
ENST00000463007.5
CDS GCA 72 bp TCTTCCTCATCGCTCTCAATGGGCTCCTGCTTCACCTaGACGCCGGCCTGTGCGTGCGCCTCCTTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: SSSSLSMGSCFT*TPACACASFCP
Trigger: GGGGCAGAAGGAGGCGCACGCACAGGCCGGCGTGCAGGTGAAGCAGGAGCCCATTGAGAGCGATGAGGAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp GCCAGGACAATCCGGCCGCCAGCCAGGCCCATCAGCTaGTTCGTCAGGTACCCGAAGCCTGCAACGGGAAAC +
Preference number: 6 (lower is better)
Translates to: ARTIRPPARPIS*FVRYPKPATGN
Trigger: GTTTCCCGTTGCAGGCTTCGGGTACCTGACGAAGCAGCTGATGGGCCTGGCTGGCGGCCGGATTGTCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430200.1
CDS CCA 72 bp CCCACCAACACATACAAGTACCGGGACGGTGAGGGCTaGGTCACAGACGTTCAAGCGCCGAGCCTCGCCGGC +
Preference number: 6 (lower is better)
Translates to: PTNTYKYRDGEG*VTDVQAPSLAG
Trigger: GCCGGCGAGGCTCGGCGCTTGAACGTCTGTGACCCAGCCCTCACCGTCCCGGTACTTGTATGTGTTGGTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS TCA 72 bp GAGCATGGCCTGAAGGCCTGGCCTGTAGGAGCGACGTaGGGACTGGGGTCGGGGTGCTCTCTTCCAAGCAGT +
Preference number: 6 (lower is better)
Translates to: EHGLKAWPVGAT*GLGSGCSLPSS
Trigger: ACTGCTTGGAAGAGAGCACCCCGACCCCAGTCCTCACGTCGCTCCTACAGGCCAGGCCTTCAGGCCATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS GCA 72 bp TGTGTAGAGGGGAAGTGGAGCGGCCGAGCCTTCTCGTaGCACAAGTCTGTGCGCCAAACTCGTCTCCGCCGG +
Preference number: 6 (lower is better)
Translates to: CVEGKWSGRAFS*HKSVRQTRLRR
Trigger: CCGGCGGAGACGAGTTTGGCGCACAGACTTGTGGCACGAGAAGGCTCGGCCGCTCCACTTCCCCTCTACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345617.7
ENST00000445704.1
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS GCA 72 bp GGGTTCGTGCCATACAGGAGGGTGTGGGCTTCCGAGTaGACCGTCTGTAGCTCCTCCAGGGTGGCCTTGCGT +
Preference number: 6 (lower is better)
Translates to: GFVPYRRVWASE*TVCSSSRVALR
Trigger: ACGCAAGGCCACCCTGGAGGAGCTACAGACGGTGCACTCGGAAGCCCACACCCTCCTGTATGGCACGAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345617.7
ENST00000460235.1
ENST00000463007.5
ENST00000487617.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp TCAGGTACCCGAAGCCTGCAACGGGAAACGGGAGACTaGAGTGTGAACGGGGGAGGACCGCAGCCAGCACAG +
Preference number: 6 (lower is better)
Translates to: SGTRSLQRETGD*SVNGGGPQPAQ
Trigger: CTGTGCTGGCTGCGGTCCTCCCCCGTTCACACTGCAGTCTCCCGTTTCCCGTTGCAGGCTTCGGGTACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430200.1
CDS CCA 72 bp CTCCGGGTGGCTCTCCGGCTGCCGGGCTGGCTCGCTTaGCTTGGGGATGATCTTGTTCATCTGCAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LRVALRLPGWLA*LGDDLVHLQLL
Trigger: CAGCAACTGCAGATGAACAAGATCATCCCCAAGCCAAGCGAGCCAGCCCGGCAGCCGGAGAGCCACCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp AGCATCTGGCGGAGAGGTTGTAGCCCCCAAGAGGGGTaGGGTGGCCCTCCACGGCATCGAAGCCTGATGACA +
Preference number: 6 (lower is better)
Translates to: SIWRRGCSPQEG*GGPPRHRSLMT
Trigger: TGTCATCAGGCTTCGATGCCGTGGAGGGCCACCCCACCCCTCTTGGGGGCTACAACCTCTCCGCCAGATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000494800.1
ENST00000543185.6
CDS CCA 72 bp CGCAAGTCTGAGCCTCGATCAGAGAACGCCCCGCTGTaGAGGTTGTGCGCTGCAGGCAGCGCCAGTACTTGC +
Preference number: 6 (lower is better)
Translates to: RKSEPRSENAPL*RLCAAGSASTC
Trigger: GCAAGTACTGGCGCTGCCTGCAGCGCACAACCTCCACAGCGGGGCGTTCTCTGATCGAGGCTCAGACTTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS CAA 72 bp GGGTGGCTCTCCGGCTGCCGGGCTGGCTCGCTTGGCTaGGGGATGATCTTGTTCATCTGCAGTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GWLSGCRAGSLG*GMILFICSCCC
Trigger: GCAGCAGCAACTGCAGATGAACAAGATCATCCCCAAGCCAAGCGAGCCAGCCCGGCAGCCGGAGAGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CAA 90 bp GTCTCCTCCGGGTGGCTCTCCGGCTGCCGGGCTGGCTCGCTTGGCTaGGGGATGATCTTGTTCATCTGCAGTTGCTGCTGCTGGAACTGC +
Preference number: 6 (lower is better)
Translates to: VSSGWLSGCRAGSLG*GMILFICSCCCWNC
Trigger: GCAGTTCCAGCAGCAGCAACTGCAGATGAACAAGATCATCCCCAAGCCAAGCGAGCCAGCCCGGCAGCCGGAGAGCCACCCGGAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CAA 90 bp GCCGAGCCTCGCCGGCAAGGTCTCATGAGCCAGGTAACCCACAAGTaGAACAGAGGCGTCCGCTGGCTTCTGCAGATGAACCTGCTCGGG +
Preference number: 6 (lower is better)
Translates to: AEPRRQGLMSQVTHK*NRGVRWLLQMNLLG
Trigger: CCCGAGCAGGTTCATCTGCAGAAGCCAGCGGACGCCTCTGTTCAACTTGTGGGTTACCTGGCTCATGAGACCTTGCCGGCGAGGCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345617.7
CDS GCA 72 bp AGCATCTCCTGTTGTTGCTTGATGTGCTCGTGGAGCTaGGCCTCGTGCTGCCGGGAGAGCTGCTCGTGCTGC +
Preference number: 6 (lower is better)
Translates to: SISCCCLMCSWS*ASCCRESCSCC
Trigger: GCAGCACGAGCAGCTCTCCCGGCAGCACGAGGCGCAGCTCCACGAGCACATCAAGCAACAACAGGAGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345617.7
ENST00000446876.1
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp TCGGGGTGGCTGCTGCTACTCCCGCAGGTGCACTGGTaGTTCAGCATCAGCGTGTCATACACGAGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: SGWLLLLPQVHW*FSISVSYTRPV
Trigger: GACAGGCCTCGTGTATGACACGCTGATGCTGAAGCACCAGTGCACCTGCGGGAGTAGCAGCAGCCACCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp AGGACCGCAGCCAGCACAGCCCAGAAACGCGTCTCATaGCATCGTAAGAAGACTGGGGGCTGGGGTGTCGAG +
Preference number: 6 (lower is better)
Translates to: RTAASTAQKRVS*HRKKTGGWGVE
Trigger: CTCGACACCCCAGCCCCCAGTCTTCTTACGATGCCATGAGACGCGTTTCTGGGCTGTGCTGGCTGCGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430200.1
CDS CAA 72 bp TCTGAGCCTCGATCAGAGAACGCCCCGCTGTGGAGGTaGTGCGCTGCAGGCAGCGCCAGTACTTGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: SEPRSENAPLWR*CAAGSASTCCG
Trigger: TCCACAGCAAGTACTGGCGCTGCCTGCAGCGCACAACCTCCACAGCGGGGCGTTCTCTGATCGAGGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS TCA 72 bp TCTGCTGCAGAAGCTTGGCTGCCACGGCCACGGAGTTaGAGTAGCAAAAGCCCATGGGCGTGCTCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: SAAEAWLPRPRS*SSKSPWACSPP
Trigger: CGGAGGAGAGCACGCCCATGGGCTTTTGCTACTTCAACTCCGTGGCCGTGGCAGCCAAGCTTCTGCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000487617.5
ENST00000543185.6
CDS TCA 72 bp GCGGTGACCGTCTCGGCTTCTTCGTTCTCGCAAGTCTaGGCCTCGATCAGAGAACGCCCCGCTGTGGAGGTT +
Preference number: 6 (lower is better)
Translates to: AVTVSASSFSQV*ASIRERPAVEV
Trigger: AACCTCCACAGCGGGGCGTTCTCTGATCGAGGCTCAGACTTGCGAGAACGAAGAAGCCGAGACGGTCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS TCA 72 bp CTACTTCAGGTGTCATGTGAAGCCGGGAGGCTCACCTaGAGGCCGCCAAGTACTCAGCGTCTCCCATGGGGG +
Preference number: 6 (lower is better)
Translates to: LLQVSCEAGRLT*RPPSTQRLPWG
Trigger: CCCCCATGGGAGACGCTGAGTACTTGGCGGCCTTCAGGTGAGCCTCCCGGCTTCACATGACACCTGAAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487617.5
CDS TCA 72 bp CATTGCAGGACGCCTCCTTCTCAAACTGAGCCCCTCTaGGCGCCGAGTGCTTTGGGGCTCCTAAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: HCRTPPSQTEPL*APSALGLLSRS
Trigger: GCTCCTGCTTAGGAGCCCCAAAGCACTCGGCGCTCAGAGGGGCTCAGTTTGAGAAGGAGGCGTCCTGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS GCA 72 bp TCGATCAGAGAACGCCCCGCTGTGGAGGTTGTGCGCTaGAGGCAGCGCCAGTACTTGCTGTGGATCTCCATG +
Preference number: 6 (lower is better)
Translates to: SIRERPAVEVVR*RQRQYLLWISM
Trigger: CATGGAGATCCACAGCAAGTACTGGCGCTGCCTGCAGCGCACAACCTCCACAGCGGGGCGTTCTCTGATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS GCA 72 bp TACCAGTCTGTGACGAGGGGTGCTTGTGCCGGCGGCTaGTCCAGTAAGACCATGTGCTGCAGAAGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: YQSVTRGACAGG*SSKTMCCRRGL
Trigger: CAGCCCTCTTCTGCAGCACATGGTCTTACTGGAGCAGCCGCCGGCACAAGCACCCCTCGTCACAGACTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461113.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp AGCCACCTGCGCCAGACAACCTTCCCCAGAGAAAGGTaGCCGAGTCGGCGATCAAAACGCTCTCGGCTCACA +
Preference number: 6 (lower is better)
Translates to: SHLRQTTFPRER*PSRRSKRSRLT
Trigger: TGTGAGCCGAGAGCGTTTTGATCGCCGACTCGGGCACCTTTCTCTGGGGAAGGTTGTCTGGCGCAGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS GCA 72 bp GGCCCTCGAGGGCTCCTGTCCACCACCAGGCAGACTTaGCACTTGATAGACACCGCTCATTATGTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: GPRGLLSTTRQT*HLIDTAHYVGR
Trigger: CCTCCCCACATAATGAGCGGTGTCTATCAAGTGGCAAGTCTGCCTGGTGGTGGACAGGAGCCCTCGAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS CCA 72 bp GGACAAGCGGTGGCTTCCAGAAGCTGGGGGAGCCCCTaGGCATCACGTGGAGATGAGAGAAGATGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: GQAVASRSWGSP*ASRGDERRCFQ
Trigger: CTGGAAGCATCTTCTCTCATCTCCACGTGATGCCCAGGGGCTCCCCCAGCTTCTGGAAGCCACCGCTTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS CAA 90 bp CCCCAGACCAGGCCCTCGAGGGCTCCTGTCCACCACCAGGCAGACTaGCCACTTGATAGACACCGCTCATTATGTGGGGAGGGAGGATTT +
Preference number: 6 (lower is better)
Translates to: PQTRPSRAPVHHQAD*PLDRHRSLCGEGGF
Trigger: AAATCCTCCCTCCCCACATAATGAGCGGTGTCTATCAAGTGGCAAGTCTGCCTGGTGGTGGACAGGAGCCCTCGAGGGCCTGGTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS TCA 72 bp CCAAACTCCCACCAACACATACAAGTACCGGGACGGTaGGGGCTGGGTCACAGACGTTCAAGCGCCGAGCCT +
Preference number: 6 (lower is better)
Translates to: PNSHQHIQVPGR*GLGHRRSSAEP
Trigger: AGGCTCGGCGCTTGAACGTCTGTGACCCAGCCCTCACCGTCCCGGTACTTGTATGTGTTGGTGGGAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS TCA 72 bp GTCGGCGATCAAAACGCTCTCGGCTCACACGGCCTTTaGAGCCGCACATGGGCAGCCCCTGCGTATGGAAAA +
Preference number: 6 (lower is better)
Translates to: VGDQNALGSHGL*SRTWAAPAYGK
Trigger: TTTTCCATACGCAGGGGCTGCCCATGTGCGGCTTCAAAGGCCGTGTGAGCCGAGAGCGTTTTGATCGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS TCA 72 bp CTATGGGAGTCTGGCCAGGGGAGGGAGGTGTTAAGATaGAATACACAGCCCTTGGGCTGGCCCCAGGGAACC +
Preference number: 6 (lower is better)
Translates to: LWESGQGREVLR*NTQPLGWPQGT
Trigger: GGTTCCCTGGGGCCAGCCCAAGGGCTGTGTATTTCATCTTAACACCTCCCTCCCCTGGCCAGACTCCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS GCA 72 bp GCGTTTTCCCGTACCAGTAGCGAGGGTCGCTGGAAATaGAGTGGTTCAGATTCCGGTGGGCCAGCGCCTTCT +
Preference number: 6 (lower is better)
Translates to: AFSRTSSEGRWK*SGSDSGGPAPS
Trigger: AGAAGGCGCTGGCCCACCGGAATCTGAACCACTGCATTTCCAGCGACCCTCGCTACTGGTACGGGAAAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp AAGATCAAATCCAGGCTTGACGACAGACTGGGCTGGTaGCCTGGACAAGCGGTGGCTTCCAGAAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: KIKSRLDDRLGW*PGQAVASRSWG
Trigger: CCCCCAGCTTCTGGAAGCCACCGCTTGTCCAGGGCACCAGCCCAGTCTGTCGTCAAGCCTGGATTTGATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS GCA 72 bp CGGCTTCGGGGTGGGGTCCTAATCATGCACTGTGAATaGTCCAGGTGGATCAACGGCAAGGACTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RLRGGVLIMHCE*SRWINGKDCRA
Trigger: AGCCCTGCAGTCCTTGCCGTTGATCCACCTGGAGCATTCACAGTGCATGATTAGGACCCCACCCCGAAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS CCA 72 bp TGGTTCACGCGGGCAGGATTCAGCAGCTCCACTGGCTaGTCTCGGCCAGAAAGTCCATCTGGATGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: WFTRAGFSSSTG*SRPESPSGWLW
Trigger: CCAAAGCCATCCAGATGGACTTTCTGGCCGAGACCAGCCAGTGGAGCTGCTGAATCCTGCCCGCGTGAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS CCA 72 bp CATGTGGTTCACGCGGGCAGGATTCAGCAGCTCCACTaGCTGGTCTCGGCCAGAAAGTCCATCTGGATGGCT +
Preference number: 6 (lower is better)
Translates to: HVVHAGRIQQLH*LVSARKSIWMA
Trigger: AGCCATCCAGATGGACTTTCTGGCCGAGACCAGCCAGTGGAGCTGCTGAATCCTGCCCGCGTGAACCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS CCA 72 bp TGTGCTGCGTTTTCCCGTACCAGTAGCGAGGGTCGCTaGAAATGCAGTGGTTCAGATTCCGGTGGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: CAAFSRTSSEGR*KCSGSDSGGPA
Trigger: CGCTGGCCCACCGGAATCTGAACCACTGCATTTCCAGCGACCCTCGCTACTGGTACGGGAAAACGCAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CCA 72 bp CATGTGGTTCACGCGGGCAGGATTCAGCAGCTCCACTaGCTGGTCTCGGCCAGAAAGTCCATCTTCAGCCCA +
Preference number: 6 (lower is better)
Translates to: HVVHAGRIQQLH*LVSARKSIFSP
Trigger: TGGGCTGAAGATGGACTTTCTGGCCGAGACCAGCCAGTGGAGCTGCTGAATCCTGCCCGCGTGAACCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446876.1
CDS CAA 72 bp ACAGCAAAGCCATTCTTCAGCTCCCCTGTGGCCACCTaGAAGACCAGCTCTACCACGCAGCCCACAGCCAGG +
Preference number: 6 (lower is better)
Translates to: TAKPFFSSPVAT*KTSSTTQPTAR
Trigger: CCTGGCTGTGGGCTGCGTGGTAGAGCTGGTCTTCAAGGTGGCCACAGGGGAGCTGAAGAATGGCTTTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000487617.5
ENST00000543185.6
CDS CAA 72 bp AGTCGGCGATCAAAACGCTCTCGGCTCACACGGCCTTaGAAGCCGCACATGGGCAGCCCCTGCGTATGGAAA +
Preference number: 6 (lower is better)
Translates to: SRRSKRSRLTRP*KPHMGSPCVWK
Trigger: TTTCCATACGCAGGGGCTGCCCATGTGCGGCTTCAAAGGCCGTGTGAGCCGAGAGCGTTTTGATCGCCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CAA 72 bp AGGCCCTCGAGGGCTCCTGTCCACCACCAGGCAGACTaGCCACTTGATAGACACCGCTCATTATGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: RPSRAPVHHQAD*PLDRHRSLCGE
Trigger: CTCCCCACATAATGAGCGGTGTCTATCAAGTGGCAAGTCTGCCTGGTGGTGGACAGGAGCCCTCGAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS CAA 90 bp GCCGAGCCTCGCCGGCAAGGTCTCATGAGCCAGGTAACCCACAAGTaGAACAGAGGCGTCCGCTGGCTTCTGCAGATGAACCAAAAGACG +
Preference number: 6 (lower is better)
Translates to: AEPRRQGLMSQVTHK*NRGVRWLLQMNQKT
Trigger: CGTCTTTTGGTTCATCTGCAGAAGCCAGCGGACGCCTCTGTTCAACTTGTGGGTTACCTGGCTCATGAGACCTTGCCGGCGAGGCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CAA 90 bp GCCGAGCCTCGCCGGCAAGGTCTCATGAGCCAGGTAACCCACAAGTaGAACAGAGGCGTCCGCTGGCTTCTGCAGATGAACGTTGAACCA +
Preference number: 6 (lower is better)
Translates to: AEPRRQGLMSQVTHK*NRGVRWLLQMNVEP
Trigger: TGGTTCAACGTTCATCTGCAGAAGCCAGCGGACGCCTCTGTTCAACTTGTGGGTTACCTGGCTCATGAGACCTTGCCGGCGAGGCTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543185.6
CDS CAA 90 bp GTCTCGGTATTCCGGAAGCAGCCAGACCTAAGATCAAATCCAGGCTaGACGACAGACTGGGCTGGTGCCCTGGACAAGCGGTGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: VSVFRKQPDLRSNPG*TTDWAGALDKRWLP
Trigger: TGGAAGCCACCGCTTGTCCAGGGCACCAGCCCAGTCTGTCGTCAAGCCTGGATTTGATCTTAGGTCTGGCTGCTTCCGGAATACCGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS CAA 90 bp CCAGGCCCTCGAGGGCTCCTGTCCACCACCAGGCAGACTTGCCACTaGATAGACACCGCTCATTATGTGGGGAGGGAGGATTTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: PGPRGLLSTTRQTCH*IDTAHYVGREDFFP
Trigger: TGGAAAGAAATCCTCCCTCCCCACATAATGAGCGGTGTCTATCAAGTGGCAAGTCTGCCTGGTGGTGGACAGGAGCCCTCGAGGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS TCA 72 bp GGGCAATGTCTCTTTGATTCAATAGCGAGGCTGTGCTaGCAGAGTGGGGTCCACGCCTCCCCATCACAGCCG +
Preference number: 6 (lower is better)
Translates to: GQCLFDSIARLC*QSGVHASPSQP
Trigger: CGGCTGTGATGGGGAGGCGTGGACCCCACTCTGTCAGCACAGCCTCGCTATTGAATCAAAGAGACATTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463007.5
CDS TCA 72 bp ATGGCGGCTTCGGGGTGGGGTCCTAATCATGCACTGTaGATGCTCCAGGTGGATCAACGGCAAGGACTGCAG +
Preference number: 6 (lower is better)
Translates to: MAASGWGPNHAL*MLQVDQRQGLQ
Trigger: CTGCAGTCCTTGCCGTTGATCCACCTGGAGCATTCACAGTGCATGATTAGGACCCCACCCCGAAGCCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS GCA 72 bp ACGGCACTCTCTTTGCCCTTCTCCTTGTTCTTGAGCTaGTGCAGCTTCTGCTCCCGGTGCTGCTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TALSLPFSLFLS*CSFCSRCCFSS
Trigger: GCTGGAGAAGCAGCACCGGGAGCAGAAGCTGCAGCAGCTCAAGAACAAGGAGAAGGGCAAAGAGAGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345617.7
ENST00000454542.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp GTTGCTCAGCTTCCACACGGTGCTGACCAGGGCGATTaGAGGTCCATTGCAGGACGCCTCCTTCTCAAACTG +
Preference number: 6 (lower is better)
Translates to: VAQLPHGADQGD*RSIAGRLLLKL
Trigger: CAGTTTGAGAAGGAGGCGTCCTGCAATGGACCTGCAATCGCCCTGGTCAGCACCGTGTGGAAGCTGAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS CCA 72 bp CCTAAGATCAAATCCAGGCTTGACGACAGACTGGGCTaGTGCCCTGGACAAGCGGTGGCTTCCAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: PKIKSRLDDRLG*CPGQAVASRSW
Trigger: CCAGCTTCTGGAAGCCACCGCTTGTCCAGGGCACCAGCCCAGTCTGTCGTCAAGCCTGGATTTGATCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS CCA 72 bp GGTGGGGTCCTAATCATGCACTGTGAATGCTCCAGGTaGATCAACGGCAAGGACTGCAGGGCTCACCAGGGT +
Preference number: 6 (lower is better)
Translates to: GGVLIMHCECSR*INGKDCRAHQG
Trigger: ACCCTGGTGAGCCCTGCAGTCCTTGCCGTTGATCCACCTGGAGCATTCACAGTGCATGATTAGGACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS CCA 72 bp TCCCATCTCTTTAACCTCGCTCTGCACCGACAGCCATaGCGGCTTCGGGGTGGGGTCCTAATCATGCACTGT +
Preference number: 6 (lower is better)
Translates to: SHLFNLALHRQP*RLRGGVLIMHC
Trigger: ACAGTGCATGATTAGGACCCCACCCCGAAGCCGCCATGGCTGTCGGTGCAGAGCGAGGTTAAAGAGATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS CAA 72 bp CGCCGGCAAGGTCTCATGAGCCAGGTAACCCACAAGTaGAACAGAGGCGTCCGCTGGCTTCTGCAGATGAAC +
Preference number: 6 (lower is better)
Translates to: RRQGLMSQVTHK*NRGVRWLLQMN
Trigger: GTTCATCTGCAGAAGCCAGCGGACGCCTCTGTTCAACTTGTGGGTTACCTGGCTCATGAGACCTTGCCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS CAA 72 bp TTCCGGAAGCAGCCAGACCTAAGATCAAATCCAGGCTaGACGACAGACTGGGCTGGTGCCCTGGACAAGCGG +
Preference number: 6 (lower is better)
Translates to: FRKQPDLRSNPG*TTDWAGALDKR
Trigger: CCGCTTGTCCAGGGCACCAGCCCAGTCTGTCGTCAAGCCTGGATTTGATCTTAGGTCTGGCTGCTTCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS CAA 72 bp CGAGGGCTCCTGTCCACCACCAGGCAGACTTGCCACTaGATAGACACCGCTCATTATGTGGGGAGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: RGLLSTTRQTCH*IDTAHYVGRED
Trigger: ATCCTCCCTCCCCACATAATGAGCGGTGTCTATCAAGTGGCAAGTCTGCCTGGTGGTGGACAGGAGCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS TCA 72 bp AAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTACCCAACACCACCGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: KVRRSRPSWLTR*NPVSTQHHRKG
Trigger: TCCCTTGCGGTGGTGTTGGGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS GCA 72 bp CTTGCTCACGCTCAACCTCTGCTGCAGAAGCTTGGCTaGCACGGCCACGGAGTTGAAGTAGCAAAAGCCCAT +
Preference number: 6 (lower is better)
Translates to: LAHAQPLLQKLG*HGHGVEVAKAH
Trigger: ATGGGCTTTTGCTACTTCAACTCCGTGGCCGTGGCAGCCAAGCTTCTGCAGCAGAGGTTGAGCGTGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000487617.5
ENST00000543185.6
CDS GCA 72 bp AGGATCAAGCTCGTTTCCCAGCAAGGCAGAAACACATaGTTCCGAGGCGTCGCAAATGGCGGTCAGGTCGTG +
Preference number: 6 (lower is better)
Translates to: RIKLVSQQGRNT*FRGVANGGQVV
Trigger: CACGACCTGACCGCCATTTGCGACGCCTCGGAAGCATGTGTTTCTGCCTTGCTGGGAAACGAGCTTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS CCA 72 bp CGGGTGGTTATAGGAGGTCGACACTCCGCTCTGGGGTaGAGAACTCTGGTCAAGGGAACTGTGCTGCGTTTT +
Preference number: 6 (lower is better)
Translates to: RVVIGGRHSALG*RTLVKGTVLRF
Trigger: AAAACGCAGCACAGTTCCCTTGACCAGAGTTCTCCACCCCAGAGCGGAGTGTCGACCTCCTATAACCACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS TCA 72 bp GCTGCAGGCAGCGCCAGTACTTGCTGTGGATCTCCATaGCTTTCTCCATGGAACGGACAGCGTTTGCATTGG +
Preference number: 6 (lower is better)
Translates to: AAGSASTCCGSP*LSPWNGQRLHW
Trigger: CCAATGCAAACGCTGTCCGTTCCATGGAGAAAGTCATGGAGATCCACAGCAAGTACTGGCGCTGCCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS TCA 72 bp GCCCAAATGGAAATGCGCCCATGTTTGCAGGGTTCTTaGCTTGGAGAGGACATGGCCGTGCTGATATGGCCC +
Preference number: 6 (lower is better)
Translates to: AQMEMRPCLQGS*LGEDMAVLIWP
Trigger: GGGCCATATCAGCACGGCCATGTCCTCTCCAAGTCAAGAACCCTGCAAACATGGGCGCATTTCCATTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS TCA 72 bp AGAAGCACGCATCCTACCCGCACCATACTCGTGGCCTaGTGTGAGCAGATTACTGCCACAGACTTCGAAGGG +
Preference number: 6 (lower is better)
Translates to: RSTHPTRTILVA*CEQITATDFEG
Trigger: CCCTTCGAAGTCTGTGGCAGTAATCTGCTCACATCAGGCCACGAGTATGGTGCGGGTAGGATGCGTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS GCA 72 bp CATCTTCAGCCCAGACTTTCGCTTAATCCCGGAAACTaGTCCAAAGGCGTTTTTCTCAGGGCGTTCGGCGCC +
Preference number: 6 (lower is better)
Translates to: HLQPRLSLNPGN*SKGVFLRAFGA
Trigger: GGCGCCGAACGCCCTGAGAAAAACGCCTTTGGAGCAGTTTCCGGGATTAAGCGAAAGTCTGGGCTGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446876.1
CDS GCA 72 bp CACTGTGAATGCTCCAGGTGGATCAACGGCAAGGACTaGAGGGCTCACCAGGGTGCAGTGACAACAGGAAAA +
Preference number: 6 (lower is better)
Translates to: HCECSRWINGKD*RAHQGAVTTGK
Trigger: TTTTCCTGTTGTCACTGCACCCTGGTGAGCCCTGCAGTCCTTGCCGTTGATCCACCTGGAGCATTCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS CCA 72 bp TCCCAGCAACCCCAGCTATTACAATCACACTGTCACTaGGTGAACGCTGTGCACTCTACAGGGGCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SQQPQLLQSHCH*VNAVHSTGASS
Trigger: TGAGGAGGCCCCTGTAGAGTGCACAGCGTTCACCCAGTGACAGTGTGATTGTAATAGCTGGGGTTGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS CCA 72 bp CATGTGGTTCACGCGGGCAGGATTCAGCAGCTCCACTaGCTGGTCTCGGCCAGAAAGTCCATCAAACATTTG +
Preference number: 6 (lower is better)
Translates to: HVVHAGRIQQLH*LVSARKSIKHL
Trigger: CAAATGTTTGATGGACTTTCTGGCCGAGACCAGCCAGTGGAGCTGCTGAATCCTGCCCGCGTGAACCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463007.5
ENST00000535493.5
CDS CCA 72 bp GCCGCACATGGGCAGCCCCTGCGTATGGAAAACACCTaGCAGCAATTATTCACTTTGAGGGAAGCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: AAHGQPLRMENT*QQLFTLREARL
Trigger: CAGCCTTGCTTCCCTCAAAGTGAATAATTGCTGCCAGGTGTTTTCCATACGCAGGGGCTGCCCATGTGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CAA 72 bp GGCCCAAATGGAAATGCGCCCATGTTTGCAGGGTTCTaGACTTGGAGAGGACATGGCCGTGCTGATATGGCC +
Preference number: 6 (lower is better)
Translates to: GPNGNAPMFAGF*TWRGHGRADMA
Trigger: GGCCATATCAGCACGGCCATGTCCTCTCCAAGTCAAGAACCCTGCAAACATGGGCGCATTTCCATTTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS TCA 72 bp GAGGTGAGACCTGGCCTCACCCTGAGATGGCAGCACTaGCCCCAACTCAAGTGTCTTCTTTATGTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: EVRPGLTLRWQH*PQLKCLLYVFW
Trigger: CCAGAAGACATAAAGAAGACACTTGAGTTGGGGTCAGTGCTGCCATCTCAGGGTGAGGCCAGGTCTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS CCA 72 bp AATGGAAATGCGCCCATGTTTGCAGGGTTCTTGACTTaGAGAGGACATGGCCGTGCTGATATGGCCCACTCC +
Preference number: 6 (lower is better)
Translates to: NGNAPMFAGFLT*RGHGRADMAHS
Trigger: GGAGTGGGCCATATCAGCACGGCCATGTCCTCTCCAAGTCAAGAACCCTGCAAACATGGGCGCATTTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS CCA 72 bp GGCTCAATTCAGGAGGAAAGTCGACAGACAGAGACCTaGACAGCCAGTTCTGCACAGAGCAGTCTCCTATGG +
Preference number: 6 (lower is better)
Translates to: GSIQEESRQTET*TASSAQSSLLW
Trigger: CCATAGGAGACTGCTCTGTGCAGAACTGGCTGTCCAGGTCTCTGTCTGTCGACTTTCCTCCTGAATTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS CAA 90 bp AAGGTTTATGGCCCAAATGGAAATGCGCCCATGTTTGCAGGGTTCTaGACTTGGAGAGGACATGGCCGTGCTGATATGGCCCACTCCAGC +
Preference number: 6 (lower is better)
Translates to: KVYGPNGNAPMFAGF*TWRGHGRADMAHSS
Trigger: GCTGGAGTGGGCCATATCAGCACGGCCATGTCCTCTCCAAGTCAAGAACCCTGCAAACATGGGCGCATTTCCATTTGGGCCATAAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS TCA 72 bp GTCTTCTTTATGTCTTCTGGCCTCCTAGGACTACCTTaGGGAGCCCCAGTCAAACACACGGGGCTTAGGCTT +
Preference number: 6 (lower is better)
Translates to: VFFMSSGLLGLP*GAPVKHTGLRL
Trigger: AAGCCTAAGCCCCGTGTGTTTGACTGGGGCTCCTCAAGGTAGTCCTAGGAGGCCAGAAGACATAAAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS GCA 72 bp CGTAACAGGGGGCTGCTCCGTCTTTCGGCCACTTTCTaGTTTAGCCTGGACCGTAATTTCAGATTCGGTTCA +
Preference number: 6 (lower is better)
Translates to: RNRGLLRLSATF*FSLDRNFRFGS
Trigger: TGAACCGAATCTGAAATTACGGTCCAGGCTAAAGCAGAAAGTGGCCGAAAGACGGAGCAGCCCCCTGTTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345617.7
ENST00000461113.5
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
ENST00000553145.1
CDS CCA 72 bp AATACAGAAGCACGCATCCTACCCGCACCATACTCGTaGCCTGATGTGAGCAGATTACTGCCACAGACTTCG +
Preference number: 6 (lower is better)
Translates to: NTEARILPAPYS*PDVSRLLPQTS
Trigger: CGAAGTCTGTGGCAGTAATCTGCTCACATCAGGCCACGAGTATGGTGCGGGTAGGATGCGTGCTTCTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CCA 72 bp AGCCAGTTCTGCACAGAGCAGTCTCCTATGGGAGTCTaGCCAGGGGAGGGAGGTGTTAAGATGAAATACACA +
Preference number: 6 (lower is better)
Translates to: SQFCTEQSPMGV*PGEGGVKMKYT
Trigger: TGTGTATTTCATCTTAACACCTCCCTCCCCTGGCCAGACTCCCATAGGAGACTGCTCTGTGCAGAACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495497.1
CDS TCA 72 bp AGCAACCCCAGCTATTACAATCACACTGTCACTGGGTaGACGCTGTGCACTCTACAGGGGCCTCCTCATTTA +
Preference number: 6 (lower is better)
Translates to: SNPSYYNHTVTG*TLCTLQGPPHL
Trigger: TAAATGAGGAGGCCCCTGTAGAGTGCACAGCGTTCACCCAGTGACAGTGTGATTGTAATAGCTGGGGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463007.5
CDS TCA 72 bp AAGAGAAAGGCAACCTTGAACTTCTTTCTGTGCTTTTaGGACCCTGGCCCAGAGACTGGCTCCAGAGCCATG +
Preference number: 6 (lower is better)
Translates to: KRKATLNFFLCF*DPGPETGSRAM
Trigger: CATGGCTCTGGAGCCAGTCTCTGGGCCAGGGTCTCAAAAGCACAGAAAGAAGTTCAAGGTTGCCTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496347.1
CDS GCA 72 bp AAAGGTTTATGGCCCAAATGGAAATGCGCCCATGTTTaGAGGGTTCTTGACTTGGAGAGGACATGGCCGTGC +
Preference number: 6 (lower is better)
Translates to: KGLWPKWKCAHV*RVLDLERTWPC
Trigger: GCACGGCCATGTCCTCTCCAAGTCAAGAACCCTGCAAACATGGGCGCATTTCCATTTGGGCCATAAACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS CCA 72 bp CGAGGGTCGCTGGAAATGCAGTGGTTCAGATTCCGGTaGGCCAGCGCCTTCTTTTTATTGAGGACAAATTCT +
Preference number: 6 (lower is better)
Translates to: RGSLEMQWFRFR*ASAFFLLRTNS
Trigger: AGAATTTGTCCTCAATAAAAAGAAGGCGCTGGCCCACCGGAATCTGAACCACTGCATTTCCAGCGACCCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS GCA 72 bp CTTGGCTTGGGGATGATCTTGTTCATCTGCAGTTGCTaGTGCTGGAACTGCTGCTTGTGTTTCTCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: LGLGMILFICSC*CWNCCLCFSRN
Trigger: GTTTCTGGAGAAACACAAGCAGCAGTTCCAGCAGCAGCAACTGCAGATGAACAAGATCATCCCCAAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345617.7
ENST00000463007.5
ENST00000493582.5
ENST00000535493.5
ENST00000543185.6
CDS CAA 90 bp CTGTGGATCTCCATGACTTTCTCCATGGAACGGACAGCGTTTGCATaGGGTCTTTGCTGTAAAACCTTTTCTGGGAGAGGATCAAGCTCG +
Preference number: 6 (lower is better)
Translates to: LWISMTFSMERTAFA*GLCCKTFSGRGSSS
Trigger: CGAGCTTGATCCTCTCCCAGAAAAGGTTTTACAGCAAAGACCCAATGCAAACGCTGTCCGTTCCATGGAGAAAGTCATGGAGATCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS GCA 72 bp TTCTCCATGGAACGGACAGCGTTTGCATTGGGTCTTTaGTGTAAAACCTTTTCTGGGAGAGGATCAAGCTCG +
Preference number: 6 (lower is better)
Translates to: FSMERTAFALGL*CKTFSGRGSSS
Trigger: CGAGCTTGATCCTCTCCCAGAAAAGGTTTTACAGCAAAGACCCAATGCAAACGCTGTCCGTTCCATGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS GCA 72 bp AGCAGATTACTGCCACAGACTTCGAAGGGGATGAGATaGTGGCTGCATACAGGATCCTGTTTCTTAAAGCGA +
Preference number: 6 (lower is better)
Translates to: SRLLPQTSKGMR*WLHTGSCFLKR
Trigger: TCGCTTTAAGAAACAGGATCCTGTATGCAGCCAGCATCTCATCCCCTTCGAAGTCTGTGGCAGTAATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CCA 72 bp AGATTACTGCCACAGACTTCGAAGGGGATGAGATGCTaGCTGCATACAGGATCCTGTTTCTTAAAGCGAGAG +
Preference number: 6 (lower is better)
Translates to: RLLPQTSKGMRC*LHTGSCFLKRE
Trigger: CTCTCGCTTTAAGAAACAGGATCCTGTATGCAGCCAGCATCTCATCCCCTTCGAAGTCTGTGGCAGTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493582.5
CDS CAA 72 bp GGCCAGAAAGTCCATCTGGATGGCTTTGGGAGCTCATaGCTAGCAATGTCCACTCCTTTAAGTGATTCGAAA +
Preference number: 6 (lower is better)
Translates to: GQKVHLDGFGSS*LAMSTPLSDSK
Trigger: TTTCGAATCACTTAAAGGAGTGGACATTGCTAGCAATGAGCTCCCAAAGCCATCCAGATGGACTTTCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS CAA 72 bp TCCATGACTTTCTCCATGGAACGGACAGCGTTTGCATaGGGTCTTTGCTGTAAAACCTTTTCTGGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: SMTFSMERTAFA*GLCCKTFSGRG
Trigger: TCCTCTCCCAGAAAAGGTTTTACAGCAAAGACCCAATGCAAACGCTGTCCGTTCCATGGAGAAAGTCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000430200.1
ENST00000543185.6
CDS TCA 72 bp GTAGAAGCATCAGTAAGAACCACAGGCTCACACCCATaGAACAAAGCAGCAGAAGCTCTAGGTTCACTTTTC +
Preference number: 6 (lower is better)
Translates to: VEASVRTTGSHP*NKAAEALGSLF
Trigger: GAAAAGTGAACCTAGAGCTTCTGCTGCTTTGTTTCATGGGTGTGAGCCTGTGGTTCTTACTGATGCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461113.5
CDS TCA 72 bp TTATTCACTTTGAGGGAAGCAAGGCTGCGATTTCTGTaGCCACTGGGACTCGAGAAGAAACAGGACATTATT +
Preference number: 6 (lower is better)
Translates to: LFTLREARLRFL*PLGLEKKQDII
Trigger: AATAATGTCCTGTTTCTTCTCGAGTCCCAGTGGTCACAGAAATCGCAGCCTTGCTTCCCTCAAAGTGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493582.5
ENST00000535493.5
CDS TCA 72 bp TGGGAGCTCATTGCTAGCAATGTCCACTCCTTTAAGTaGTTCGAAATGGCTCAAAATTTCCACGGAAACGAT +
Preference number: 6 (lower is better)
Translates to: WELIASNVHSFK*FEMAQNFHGND
Trigger: ATCGTTTCCGTGGAAATTTTGAGCCATTTCGAATCACTTAAAGGAGTGGACATTGCTAGCAATGAGCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6
CDS CCA 72 bp TTGCTAGCAATGTCCACTCCTTTAAGTGATTCGAAATaGCTCAAAATTTCCACGGAAACGATAGCTCCAACG +
Preference number: 6 (lower is better)
Translates to: LLAMSTPLSDSK*LKISTETIAPT
Trigger: CGTTGGAGCTATCGTTTCCGTGGAAATTTTGAGCCATTTCGAATCACTTAAAGGAGTGGACATTGCTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345617.7
ENST00000493582.5
ENST00000543185.6