RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HDAC11 (Homo sapiens)

Ensembl gene IDs: ENSG00000163517

Ensembl transcript IDs: ENST00000295757.8, ENST00000402259.5, ENST00000402271.5, ENST00000404040.5, ENST00000404548.5, ENST00000405025.5, ENST00000405478.5, ENST00000416248.5, ENST00000418189.5, ENST00000425430.5, ENST00000433119.5, ENST00000434848.5, ENST00000437379.2, ENST00000446613.6, ENST00000455904.5, ENST00000458642.5, ENST00000475818.5, ENST00000487585.5, ENST00000498532.5, ENST00000522202.5

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCAGGAACCCCTGCCCCGCCTCACCAGTGTCTGGGTCCCTCCCTaGGCCTGGGTTCCTGCAGGACCTGGCTTGGGCACCACCCTGCAT +
Preference number: 1 (lower is better)
Translates to: LQEPLPRLTSVWVPP*AWVPAGPGLGTTLH
Trigger: ATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACCCAGGCCCAGGGAGGGACCCAGACACTGGTGAGGCGGGGCAGGGGTTCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR GCA 90 bp CCAGGCCAGGATAGAGATCCTCGCTGCCCTCTCTCCAGGAACCCCTaGCCCGCCTCACCAGTGTCTGGGTCCCTCCCTGGGCCTGGGTTC +
Preference number: 1 (lower is better)
Translates to: PGQDRDPRCPLSRNP*PASPVSGSLPGPGF
Trigger: GAACCCAGGCCCAGGGAGGGACCCAGACACTGGTGAGGCGGGGCAGGGGTTCCTGGAGAGAGGGCAGCGAGGATCTCTATCCTGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR TCA 90 bp GCCTGGGTTCCTGCAGGACCTGGCTTGGGCACCACCCTGCATCCCTaGTTTCCACCTGTGAGCCTGGCCTGCCCACGTCCCCCACCCTTC +
Preference number: 1 (lower is better)
Translates to: AWVPAGPGLGTTLHP*FPPVSLACPRPPPF
Trigger: GAAGGGTGGGGGACGTGGGCAGGCCAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR TCA 90 bp CAGGACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCTGTaGGCCTGGCCTGCCCACGTCCCCCACCCTTCTTCTGCCCTCTCC +
Preference number: 1 (lower is better)
Translates to: QDLAWAPPCIPDFHL*AWPAHVPHPSSALS
Trigger: GGAGAGGGCAGAAGAAGGGTGGGGGACGTGGGCAGGCCAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR TCA 90 bp TATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCG +
Preference number: 1 (lower is better)
Translates to: YGVSNDAGCALLVPA*GHHKDGHPAATDHP
Trigger: CGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR GCA 90 bp CTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTaGCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTC +
Preference number: 1 (lower is better)
Translates to: LWAGDFVWVPLGHRL*LLPPPIEASSPSGF
Trigger: GAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR CCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTaGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: QALPSAPTHRGLKPF*LPAGKSRGRASSRP
Trigger: GGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR CCA 90 bp CCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTaGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGC +
Preference number: 1 (lower is better)
Translates to: PSPCSRGSIREAGRQ*EHPLTVMNTSPVGG
Trigger: GCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR GCA 90 bp CGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTaGCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCC +
Preference number: 1 (lower is better)
Translates to: RCAWDLACPLQFSVN*LPPWTYGLVTSCGS
Trigger: GGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR CCA 90 bp GACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACA +
Preference number: 1 (lower is better)
Translates to: DLACPLQFSVNCLPP*TYGLVTSCGSPWDT
Trigger: TGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR CCA 90 bp TCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATaGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAAGG +
Preference number: 1 (lower is better)
Translates to: SVAEPQKSLACVGCE*MLGASSQRQRPTAR
Trigger: CCTTGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR GCA 90 bp TCGAGTCAGCGACAGAGACCAACGGCAAGGGTAGGGATCTCAGAGTaGATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGT +
Preference number: 1 (lower is better)
Translates to: SSQRQRPTARVGISE*IVRASGSGPGGQHC
Trigger: ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGTTGGTCTCTGTCGCTGACTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CCA 90 bp GTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTaGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCT +
Preference number: 1 (lower is better)
Translates to: VLKTRTPQAQGPRCA*DLACPLQFSVNCLP
Trigger: AGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR CCA 90 bp CAGCTCCACCTTCCGCCTGATGGCCTGCTTGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTAGACATCCATGATGTACACACGCTT +
Preference number: 1 (lower is better)
Translates to: QLHLPPDGLLGKAVP*VDVAVVDIHDVHTL
Trigger: AAGCGTGTGTACATCATGGATGTCTACAACCGCCACATCTACCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR CCA 90 bp AACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCA +
Preference number: 1 (lower is better)
Translates to: NRLSMESAMMRAVRF*YPPEVTIRMGTRRP
Trigger: TGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR GCA 90 bp TCGAGGATGTCGGTGCCTGCATTGTATACCACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTGATGTTCCTCTCCACCTTATCCAGG +
Preference number: 1 (lower is better)
Translates to: SRMSVPALYTTTSGR*SWRDFLMFLSTLSR
Trigger: CCTGGATAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGTGGTATACAATGCAGGCACCGACATCCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR TCA 90 bp TGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTaGCATTTTGTGATCTTGGAACCCTTCTCCCTGCAGCAGAGGGAG +
Preference number: 1 (lower is better)
Translates to: CIVRASGSGPGGQHC*HFVILEPFSLQQRE
Trigger: CTCCCTCTGCTGCAGGGAGAAGGGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CCA 90 bp ATGTCGGTGCCTGCATTGTATACCACCACGTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTCCTCTCCACCTTATCCAGGTACTCA +
Preference number: 1 (lower is better)
Translates to: MSVPALYTTTSGRCS*RDFLMFLSTLSRYS
Trigger: TGAGTACCTGGATAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGTGGTATACAATGCAGGCACCGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR GCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGCCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR TCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 2 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR TCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 2 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp CTGGGTTCCTGCAGGACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCCCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: LGSCRTWLGHHPASLISTPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...GGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGCCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp TCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCACCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: SEFCAETLGDSGPMSPRPPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...TGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR GCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGAGGGTTCCCACCTGCTaGCTGGGAACCAGGCCCACC +
Preference number: 2 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGRVPTC*LGTRPT
Trigger: GGTGGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCT...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACC +
Preference number: 2 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGRAVRF*YPPEVT
Trigger: GGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR TCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 2 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
64% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR TCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR TCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCACCTGTACCCCTTCCTaGCCGCCCCTCACATCCAGG +
Preference number: 2 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQATCTPS*PPLTSR
Trigger: CCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGT...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp CGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: RFWYPPEVTIRMGTRRPRLLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...CCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR GCA 90 bp TGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: CLPPWTYGLVTSCGSPWDSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...GTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCCCCAGGGTTCCCACCTaGTGCCTGGGAACCAGGCCC +
Preference number: 2 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPPRVPT*CLGTRP
Trigger: GGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCTGGG...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCTCCCACCCAGGGCCCTaGCCCGGCTACCTATGTTCA +
Preference number: 2 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSSHPGP*PGYLCS
Trigger: TGAACATAGGTAGCCGGGGCAGGGCCCTGGGTGGGA...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp GGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCTTCACGATGAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 2 (lower is better)
Translates to: GTRRPRTIRNTSSSRFTMNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...CATCGTGAAGCGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR TCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: SGAKRAANPMTKGREGGPGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR TCA 90 bp CTGGGTTCCTGCAGGACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCGGGCAGCAAATCCCATaGCCAAGGGGAGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LGSCRTWLGHHPASLISTGQQIP*PRGGRE
Trigger: CTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCC...GGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp GGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCAGGGCAGCAAATCCCATaGCCAAGGGGAGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GSSGVSEFCAETLGDSGPGQQIP*PRGGRE
Trigger: CTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCC...TGGGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR TCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCAGGGGGAACTCCAGATaGGGGAACCCACCTGTACCC +
Preference number: 2 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQARGNSR*GNPPVP
Trigger: GGGTACAGGTGGGTTCCCTCATCTGGAGTTCCCCCT...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp GGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: GSAVLKTRTPQAQGPRCASQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...GGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp GAGAAGGATTGGGGCCCAGGCACTTTGGTGAGGCCAGTGGAGGCCACAGTCCCAGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: EKDWGPGTLVRPVEATVPAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...TGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 2 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGAACCAGGCCCACCTaGAGACCTAGCTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQGTRPT*RPSSST
Trigger: GGTGCTGGAGCTAGGTCTCCAGGTGGGCCTGGTTCC...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGAACCAGGCCCACCTaGAGACCTAGCTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPAGTRPT*RPSSST
Trigger: GGTGCTGGAGCTAGGTCTCCAGGTGGGCCTGGTTCC...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR TCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 2 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR TCA 90 bp GGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACGGGCAGCAAATCCCATaGCCAAGGGGAGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GSIREAGRQWEHPLTVMNGQQIP*PRGGRE
Trigger: CTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCC...GTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp GGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACCCTGATTTCCACCTGTaGGCCTGGCCTGCCCACGTC +
Preference number: 2 (lower is better)
Translates to: GSIREAGRQWEHPLTVMNPDFHL*AWPAHV
Trigger: GACGTGGGCAGGCCAGGCTCACAGGTGGAAATCAGG...GTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQALLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR TCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACCACGCTTGTCGTCCATaGAGTCTCGCTCATGCCCAT +
Preference number: 2 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHHACRP*SLAHAH
Trigger: ATGGGCATGAGCGAGACTTCATGGACGACAAGCGTG...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR TCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 2 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR GCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPASQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp CCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: PGSAVLKTRTPQAQGPRCSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...ACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGAGGGTTCCCACCTGCTaGCTGGGAACCAGGCCCACC +
Preference number: 2 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMERVPTC*LGTRPT
Trigger: GGTGGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCT...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCCTCTCCAGGAACCCCTaGCCCGCCTCACCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPLSRNP*PASPVS
Trigger: AGACACTGGTGAGGCGGGGCAGGGGTTCCTGGAGAG...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 2 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 2 (lower is better)
Translates to: SGAKRAANPMTKGREGGPASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp GGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCAGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 2 (lower is better)
Translates to: GSSGVSEFCAETLGDSGPASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...TGGGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR CCA 90 bp GGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACCTGCAGGACCTGGCTTaGGCACCACCCTGCATCCCT +
Preference number: 2 (lower is better)
Translates to: GSIREAGRQWEHPLTVMNLQDLA*APPCIP
Trigger: AGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAG...GTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp ACGGCAAGGGTAGGGATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAAACAGGCCAGAGGTCTaGCCCACCTGGGGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: TARVGISECIVRASGSGPNRPEV*PTWGPW
Trigger: CCAGGGGCCCCAGGTGGGCCAGACCTCTGGCCTGTT...TGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGAGGCCGGGAGACAGTaGGAGCACCCCCTCACTGTA +
Preference number: 2 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPEAGRQ*EHPLTV
Trigger: TACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTC...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp CGGACCATCCGGAACACCAGCTCATCCCGCTTCACGATGCCCGCTGGGCTGATGGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 2 (lower is better)
Translates to: RTIRNTSSSRFTMPAGLMVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...CATCAGCCCAGCGGGCATCGTGAAGCGGGATGAGCTGGTGTTCCGGATGGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR TCA 90 bp GTCAGGGCACTGCAGGGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 2 (lower is better)
Translates to: VRALQGEAAVCLSSVRRRVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...GCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCCCTGCAGTGCCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR GCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 2 (lower is better)
Translates to: SGAKRAANPMTKGREGGPMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 2 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPAMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 2 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 2 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGSQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCGAGGCCCAGTTAGGATaGAGGCCTAGTCAGGATGGA +
Preference number: 2 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSEAQLG*RPSQDG
Trigger: TCCATCCTGACTAGGCCTGCATCCTAACTGGGCCTC...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp AAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATCCCAGGGTTCCCACCTaGTGCCTGGGAACCAGGCCC +
Preference number: 2 (lower is better)
Translates to: KPCLWLSPRSRWPVLGVNPRVPT*CLGTRP
Trigger: GGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCTGGG...ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CAGGGCCCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: QGPRCAWDLACPLQFSVNAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp GGAACTCCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 2 (lower is better)
Translates to: GTPDEGTHLYPFLTAPHIASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...GATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGGAGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 2 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCGCCTCACCAGTGTCTaGGTCCCTCCCTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWRLTSV*VPPWAW
Trigger: CCAGGCCCAGGGAGGGACCCAGACACTGGTGAGGCG...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp GGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACGCAGGGCCACCTCAATaGACCCACTTTCCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: GSIREAGRQWEHPLTVMNAGPPQ*THFPSP
Trigger: TGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGC...GTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 2 (lower is better)
Translates to: ISECIVRASGSGPGGQHCPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGAGGGGGAACTCCAGATaGGGGAACCCACCTGTACCC +
Preference number: 2 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMERGNSR*GNPPVP
Trigger: GGGTACAGGTGGGTTCCCTCATCTGGAGTTCCCCCT...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 2 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
3UTR-3UTR GCA 90 bp CCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 2 (lower is better)
Translates to: PGSAVLKTRTPQAQGPRCSQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...ACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp GAGAAGGATTGGGGCCCAGGCACTTTGGTGAGGCCAGTGGAGGCCACAGTCCCATCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 2 (lower is better)
Translates to: EKDWGPGTLVRPVEATVPSQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...TGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGACTCCGACCTGGGTCTaGCGTTCTCAAAACCAGAAC +
Preference number: 2 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGTPTWV*RSQNQN
Trigger: GTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGT...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGAGGCCCAGTTAGGATaGAGGCCTAGTCAGGATGGA +
Preference number: 2 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPAEAQLG*RPSQDG
Trigger: TCCATCCTGACTAGGCCTGCATCCTAACTGGGCCTC...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCTGGGCCTGGGTTCCTaGAGGACCTGGCTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWLGLGS*RTWLGH
Trigger: GTGCCCAAGCCAGGTCCTGCAGGAACCCAGGCCCAG...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCAGGGCCACGATAGAGATCCTCGCTaGCCTCTCTCCAGGAACCCC +
Preference number: 2 (lower is better)
Translates to: PPHCNEHKSRRGLMEQGHDRDPR*PLSRNP
Trigger: GGGGTTCCTGGAGAGAGGGCAGCGAGGATCTCTATC...GTGGCCCTGCTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 2 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAGTCTGGGTCCCTCCCTaGGCCTGGGTTCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: VGCEWMLGASSQRQRPTAVWVPP*AWVPAG
Trigger: TCCTGCAGGAACCCAGGCCCAGGGAGGGACCCAGAC...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp AAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTCTGGGTCCCTCCCTaGGCCTGGGTTCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: KLNSDKPCLWLSPRSRWPVWVPP*AWVPAG
Trigger: TCCTGCAGGAACCCAGGCCCAGGGAGGGACCCAGAC...AGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTACCTGTACCCCTTCCTaGCCGCCCCTCACATCCAGG +
Preference number: 2 (lower is better)
Translates to: ISECIVRASGSGPGGQHCTCTPS*PPLTSR
Trigger: CCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGT...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 2 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR GCA 90 bp GGAACTCCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 2 (lower is better)
Translates to: GTPDEGTHLYPFLTAPHISQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...GATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGGAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGTCCCACCCAGGGCCCTaGCCCGGCTACCTATGTTCA +
Preference number: 2 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWSHPGP*PGYLCS
Trigger: TGAACATAGGTAGCCGGGGCAGGGCCCTGGGTGGGA...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 2 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR CCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCATTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPAFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCACCCCACAGAAGGGCCTaGGAAGGCAGGTCCAGACCT +
Preference number: 2 (lower is better)
Translates to: VGCEWMLGASSQRQRPTAPHRRA*EGRSRP
Trigger: AGGTCTGGACCTGCCTTCCCAGGCCCTTCTGTGGGG...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCTGCAGGACCTGGCTTaGGCACCACCCTGCATCCCT +
Preference number: 2 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWLQDLA*APPCIP
Trigger: AGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAG...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTGAGGCCGGGAGACAGTaGGAGCACCCCCTCACTGTA +
Preference number: 2 (lower is better)
Translates to: ISECIVRASGSGPGGQHCEAGRQ*EHPLTV
Trigger: TACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTC...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 2 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR TCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAAGGGGGAACTCCAGATaGGGGAACCCACCTGTACCC +
Preference number: 2 (lower is better)
Translates to: VGCEWMLGASSQRQRPTARGNSR*GNPPVP
Trigger: GGGTACAGGTGGGTTCCCTCATCTGGAGTTCCCCCT...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp CTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTGACATTTTGTGATCTTGGAACCCCTGATTTCCACCTGTaGGCCTGGCCTGCCCACGTC +
Preference number: 2 (lower is better)
Translates to: LGVWSRRPALLTFCDLGTPDFHL*AWPAHV
Trigger: GACGTGGGCAGGCCAGGCTCACAGGTGGAAATCAGG...GGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: VGCEWMLGASSQRQRPTASQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCAGGGCCACACTCCGACCTGGGTCTaGCGTTCTCAAAACCAGAAC +
Preference number: 2 (lower is better)
Translates to: PPHCNEHKSRRGLMEQGHTPTWV*RSQNQN
Trigger: GTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGT...GTGGCCCTGCTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGGCTGAGGCCCGTCCTTaGGCTAAGAATTCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWAEARP*AKNSSP
Trigger: GGGGGAGGAATTCTTAGCGCAAGGACGGGCCTCAGC...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTGACATTTTGTGATCTTGGAACCGATCAGGGCCACAGCTaGCGGCTAGCAGGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: LGVWSRRPALLTFCDLGTDQGHS*RLAGVD
Trigger: ATCCACCCCTGCTAGCCGGCAGCTGTGGCCCTGATC...GGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCTTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAGCAGGGCCACCTCAATaGACCCACTTTCCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: VGCEWMLGASSQRQRPTAAGPPQ*THFPSP
Trigger: TGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGC...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTGACATTTTGTGATCTTGGAACCGAGGCCGGGAGACAGTaGGAGCACCCCCTCACTGTA +
Preference number: 2 (lower is better)
Translates to: LGVWSRRPALLTFCDLGTEAGRQ*EHPLTV
Trigger: TACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTC...GGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGACCACCCTGCATCCCTaGTTTCCACCTGTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWTTLHP*FPPVSL
Trigger: CAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGT...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 2 (lower is better)
Translates to: VGCEWMLGASSQRQRPTAKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
3UTR-3UTR GCA 90 bp CACGTCGGGCAGGTGCTCCTGGAGGGATTTCTTGATGTTCCTCTCCACCTTATCATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 2 (lower is better)
Translates to: HVGQVLLEGFLDVPLHLIMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...GATAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR GCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGGTAGGGATCTCAGAGTaGATTGTTAGAGCCTCGGGG +
Preference number: 2 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMEVGISE*IVRASG
Trigger: CCCCGAGGCTCTAACAATGCACTCTGAGATCCCTAC...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 2 (lower is better)
Translates to: VGCEWMLGASSQRQRPTANCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGGGCATGGAGAAGGATTaGGGCCCAGGCACTTTGGTG +
Preference number: 2 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWGMEKD*GPGTLV
Trigger: CACCAAAGTGCCTGGGCCCCAATCCTTCTCCATGCC...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTCCCAGGGTTCCCACCTaGTGCCTGGGAACCAGGCCC +
Preference number: 2 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGPRVPT*CLGTRP
Trigger: GGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCTGGG...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCCAAAACCTGCCCCTTaGACTGAACAGGCAAGACTA +
Preference number: 2 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMEPKPAP*TEQARL
Trigger: TAGTCTTGCCTGTTCAGTGCAAGGGGCAGGTTTTGG...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CCTCTCCACCTTATCCAGGTACTCATCATCCTCTGTGCCCCACTCCAGCTCCACCTCGCTCATGCCCATTaGCCTGATGGGCATCAAGAT +
Preference number: 2 (lower is better)
Translates to: PLHLIQVLIILCAPLQLHLAHAH*PDGHQD
Trigger: ATCTTGATGCCCATCAGGGCAATGGGCATGAGCGAG...GTGGAGCTGGAGTGGGGCACAGAGGATGATGAGTACCTGGATAAGGTGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR CCA 90 bp ACGGCAAGGGTAGGGATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCATTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: TARVGISECIVRASGSGPFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...TGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGATAGCTCTTCAGCTCTaGGGCAAAGAGGGCAGCAAA +
Preference number: 2 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMEIALQL*GKEGSK
Trigger: TTTGCTGCCCTCTTTGCCCCAGAGCTGAAGAGCTAT...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAGTAGGGATCTCAGAGTaGATTGTTAGAGCCTCGGGG +
Preference number: 2 (lower is better)
Translates to: VGCEWMLGASSQRQRPTAVGISE*IVRASG
Trigger: CCCCGAGGCTCTAACAATGCACTCTGAGATCCCTAC...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CAGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: QALRYKNFPFSFPFTPRRAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...CCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTGCTAAGGCAGTGATCTaGGCGCCGCAGGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGAKAVI*APQAFP
Trigger: GGGGAAGGCCTGCGGCGCCCAGATCACTGCCTTAGC...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp AGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTA +
Preference number: 2 (lower is better)
Translates to: RPNEPQAKQIKYGVSNDAGKAVP*VDVAVV
Trigger: TACAACCGCCACATCTACCCAGGGGACCGCTTTGCC...CGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR TCA 90 bp CCTCTCCACCTTATCCAGGTACTCATCATCCTCTGTGCCCCACTCCAGCTCCACGGTTGTAGACATCCATaGTGTACACACGCTTGTCGT +
Preference number: 2 (lower is better)
Translates to: PLHLIQVLIILCAPLQLHGCRHP*CTHACR
Trigger: ACGACAAGCGTGTGTACATCATGGATGTCTACAACC...GTGGAGCTGGAGTGGGGCACAGAGGATGATGAGTACCTGGATAAGGTGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR CCA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTATAGCTCTTCAGCTCTaGGGCAAAGAGGGCAGCAAA +
Preference number: 2 (lower is better)
Translates to: ISECIVRASGSGPGGQHCIALQL*GKEGSK
Trigger: TTTGCTGCCCTCTTTGCCCCAGAGCTGAAGAGCTAT...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CAA 90 bp GCATTGTATACCACCACGTCGGGCAGGTGCTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTATCCAGGTACTCATCATCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: ALYTTTSGRCSWRDF*MFLSTLSRYSSSSV
Trigger: CACAGAGGATGATGAGTACCTGGATAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGTGGTATACAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR CCA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTGCAGGGCCACCTCAATaGACCCACTTTCCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGAGPPQ*THFPSP
Trigger: TGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGC...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CAA 90 bp ACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTAGGGATTCTTaGCCTCCAGCACACACAGCAGCCTGGGCCAATCAAGCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: TFHFHFLSPLGGRDS*PPAHTAAWANQASR
Trigger: CCTAGAGGCTTGATTGGCCCAGGCTGCTGTGTGTGCTGGAGGCAAAGAATCCCTACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp CTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTGACATTTTGTGATCTTGGAACCACAGAAGCTCAACAGTaGCAAACCATGTCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: LGVWSRRPALLTFCDLGTTEAQQ*QTMSVA
Trigger: AGCCACAGACATGGTTTGTCACTGTTGAGCTTCTGT...GGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR TCA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTACCTGCCCCTTGCACTaGACAGGCAAGACTACTGCT +
Preference number: 2 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGTCPLH*TGKTTA
Trigger: AGCAGTAGTCTTGCCTGTTCAGTGCAAGGGGCAGGT...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR GCA 90 bp CAGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGGGCAGGTCCAGACCTTaGTTTATTGAGGGGGAACTC +
Preference number: 2 (lower is better)
Translates to: QALRYKNFPFSFPFTPRRGRSRP*FIEGEL
Trigger: GAGTTCCCCCTCAATAAAGCAAGGTCTGGACCTGCC...CCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CCA 90 bp CAGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: QALRYKNFPFSFPFTPRRFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...CCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CCA 72 bp CCCCTGCCCCGCCTCACCAGTGTCTGGGTCCCTCCCTaGGCCTGGGTTCCTGCAGGACCTGGCTTGGGCACC +
Preference number: 3 (lower is better)
Translates to: PLPRLTSVWVPP*AWVPAGPGLGT
Trigger: GGTGCCCAAGCCAGGTCCTGCAGGAACCCAGGCCCAGGGAGGGACCCAGACACTGGTGAGGCGGGGCAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR TCA 72 bp CCTGCAGGACCTGGCTTGGGCACCACCCTGCATCCCTaGTTTCCACCTGTGAGCCTGGCCTGCCCACGTCCC +
Preference number: 3 (lower is better)
Translates to: PAGPGLGTTLHP*FPPVSLACPRP
Trigger: GGGACGTGGGCAGGCCAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR TCA 72 bp TGGGCATGGAGAAGGATTGGGGCCCAGGCACTTTGGTaGGGCCAGTGGAGGCCACAGTCCCACCCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: WAWRRIGAQALW*GQWRPQSHPGP
Trigger: GGGCCCTGGGTGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTCCATGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR GCA 72 bp GATAGAGATCCTCGCTGCCCTCTCTCCAGGAACCCCTaGCCCGCCTCACCAGTGTCTGGGTCCCTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: DRDPRCPLSRNP*PASPVSGSLPG
Trigger: CCCAGGGAGGGACCCAGACACTGGTGAGGCGGGGCAGGGGTTCCTGGAGAGAGGGCAGCGAGGATCTCTATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CAA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCACGCCTGATGGCCTGCTaGGCAAAGCGGTCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPARLMAC*AKRSPG
Trigger: CCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCG...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR TCA 72 bp AGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGGCACCCGGCGGCCACG +
Preference number: 3 (lower is better)
Translates to: SNDAGCALLVPA*GHHKDGHPAAT
Trigger: CGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR GCA 72 bp GGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTaGCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCT +
Preference number: 3 (lower is better)
Translates to: GDFVWVPLGHRL*LLPPPIEASSP
Trigger: AGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR-3UTR CAA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCCCTGCAGGACCTGGCTaGGGCACCACCCTGCATCCC +
Preference number: 3 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPPAGPG*GTTLHP
Trigger: GGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGG...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR TCA 72 bp ACAAAAAGCACTAAGGGGCGGATAGGCAGGGCCACGTaGCAGGCAGGGCAGCAAGGGTCAGGGCACTGCAGG +
Preference number: 3 (lower is better)
Translates to: TKSTKGRIGRAT*QAGQQGSGHCR
Trigger: CCTGCAGTGCCCTGACCCTTGCTGCCCTGCCTGTCACGTGGCCCTGCCTATCCGCCCCTTAGTGCTTTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR GCA 72 bp CGACAGAGACCAACGGCAAGGGTAGGGATCTCAGAGTaGATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: RQRPTARVGISE*IVRASGSGPGG
Trigger: GCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGTTGGTCTCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CCA 72 bp ACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTaGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAAC +
Preference number: 3 (lower is better)
Translates to: TRTPQAQGPRCA*DLACPLQFSVN
Trigger: GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR CCA 72 bp TGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTaGGAGCACCCCCTCACTGTAATGAACACAAGTCCC +
Preference number: 3 (lower is better)
Translates to: CSRGSIREAGRQ*EHPLTVMNTSP
Trigger: GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CAA 90 bp GACCATCCGGAACACCAGCTCATCCCGCTTCACGATGCCCGCTGGGCTGATGGAATGATGTACACACGCTaGTCGTCCATGAAGTCTCGC +
Preference number: 3 (lower is better)
Translates to: DHPEHQLIPLHDARWADGMMYTR*SSMKSR
Trigger: GCGAGACTTCATGGACGACAAGCGTGTGTACATCAT...TCCATCAGCCCAGCGGGCATCGTGAAGCGGGATGAGCTGGTGTTCCGGATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR TCA 72 bp CCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTaGTGGAGCAGGGCCACCTCAATGGACCCACTTTCC +
Preference number: 3 (lower is better)
Translates to: PLTVMNTSPVGG*WSRATSMDPLS
Trigger: GGAAAGTGGGTCCATTGAGGTGGCCCTGCTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CCA 72 bp AGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACCATAAGGATGGGCACC +
Preference number: 3 (lower is better)
Translates to: SMESAMMRAVRF*YPPEVTIRMGT
Trigger: GGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
3UTR GCA 72 bp TGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTaGCTGCCTCCCTGGACCTATGGGCTGGTGACTTCG +
Preference number: 3 (lower is better)
Translates to: WDLACPLQFSVN*LPPWTYGLVTS
Trigger: CGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
3UTR GCA 72 bp TCGGTGCCTGCATTGTATACCACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTGATGTTCCTCTCCACC +
Preference number: 3 (lower is better)
Translates to: SVPALYTTTSGR*SWRDFLMFLST
Trigger: GGTGGAGAGGAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGTGGTATACAATGCAGGCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR CCA 72 bp CTTCCGCCTGATGGCCTGCTTGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTAGACATCCATGATGTA +
Preference number: 3 (lower is better)
Translates to: LPPDGLLGKAVP*VDVAVVDIHDV
Trigger: TACATCATGGATGTCTACAACCGCCACATCTACCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR CAA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTCCTGCAGGACCTGGCTaGGGCACCACCCTGCATCCC +
Preference number: 3 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGPAGPG*GTTLHP
Trigger: GGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGG...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CAA 90 bp AAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGGATCTCAGAGTGCATaGTTAGAGCCTCGGGGTCTG +
Preference number: 3 (lower is better)
Translates to: KLNSDKPCLWLSPRSRWPGSQSA*LEPRGL
Trigger: CAGACCCCGAGGCTCTAACAATGCACTCTGAGATCC...AGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR TCA 72 bp AGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTaGCATTTTGTGATCTTGGAACCCTTCTCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: RASGSGPGGQHC*HFVILEPFSLQ
Trigger: CTGCAGGGAGAAGGGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CAA 90 bp AGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 3 (lower is better)
Translates to: RPNEPQAKQIKYGVSNDAMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...CGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425430.5
3UTR-3UTR CAA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTGGATCTCAGAGTGCATaGTTAGAGCCTCGGGGTCTG +
Preference number: 3 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGGSQSA*LEPRGL
Trigger: CAGACCCCGAGGCTCTAACAATGCACTCTGAGATCC...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR-3UTR CAA 90 bp CAGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGAGGAGGCCAGCATTGTaGACATTTTGTGATCTTGGA +
Preference number: 3 (lower is better)
Translates to: QALRYKNFPFSFPFTPRRRRPAL*TFCDLG
Trigger: TCCAAGATCACAAAATGTCAACAATGCTGGCCTCCT...CCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCGGAAGCTCCGCCCCCTaGCGGGAGGGCCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: EVTIRMGTRRPRTIRNTSGSSAP*REGQAG
Trigger: ACCCGCTTGGCCCTCCCGCCAGGGGGCGGAGCTTCC...GCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR CCA 90 bp GTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCACGGCCCTCCCAAAGCTaGCCGCAGCTCCGCGACCGG +
Preference number: 4 (lower is better)
Translates to: VTIRMGTRRPRTIRNTSSRPSQS*PQLRDR
Trigger: CCGGTCGCGGAGCTGCGGCCAGCTTTGGGAGGGCCG...TGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCGGCCCTCCCAAAGCTaGCCGCAGCTCCGCGACCGG +
Preference number: 4 (lower is better)
Translates to: LGLPFSKPEHPKPRALAVRPSQS*PQLRDR
Trigger: CCGGTCGCGGAGCTGCGGCCAGCTTTGGGAGGGCCG...CACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402259.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACTGCGGAGACGCTGGGTaGCTCAGGCCCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHCGDAG*LRPNEP
Trigger: GGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCA...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGAGGGTTCCCACCTGCTaGCTGGGAACCAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: RAVRFWYPPEVTIRMGTRRVPTC*LGTRPT
Trigger: GGTGGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCT...CCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCCCAGGGTTCCCACCTaGTGCCTGGGAACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSPRVPT*CLGTRP
Trigger: GGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCTGGG...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGACCCCCGGCCCAGTCTaGGAGCAGCTCCGGGACAAG +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSTPGPV*EQLRDK
Trigger: CTTGTCCCGGAGCTGCTCGCAGACTGGGCCGGGGGT...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR CCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCCCCGCCACGGTCGCTaGAGCAGTGGTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSPRHGR*SSGGSH
Trigger: GTGGCTTCCACCACTGCTCCAGCGACCGTGGCGGGG...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTCCCCGCCACGGTCGCTaGAGCAGTGGTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PWTYGLVTSCGSPWDTGSPRHGR*SSGGSH
Trigger: GTGGCTTCCACCACTGCTCCAGCGACCGTGGCGGGG...AGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGRAVRF*YPPEVT
Trigger: GGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGTGCCCTCTCCCCACCTaGGTCAGCGGCCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWCPLPT*VSGPLE
Trigger: CTCCAGGGGGCCGCTGACCCAGGTGGGGAGAGGGCA...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCCGCCTCACCAGTGTCTaGGTCCCTCCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQARLTSV*VPPWAW
Trigger: CCAGGCCCAGGGAGGGACCCAGACACTGGTGAGGCG...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp TGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACCCCCCGCCCACTTCCTaGAGGTCCCTGAATGTCCCC +
Preference number: 4 (lower is better)
Translates to: CLPPWTYGLVTSCGSPWDPPPTS*RSLNVP
Trigger: GGGGACATTCAGGGACCTCCAGGAAGTGGGCGGGGG...GTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCTGCGGAGACGCTGGGTaGCTCAGGCCCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCCGDAG*LRPNEP
Trigger: GGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCA...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCTGCGGAGACGCTGGGTaGCTCAGGCCCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQACGDAG*LRPNEP
Trigger: GGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCA...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGAGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GHHKDGHPAATDHPEHQLGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...GAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp ATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCGGGCAGCAAATCCCATaGCCAAGGGGAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IRMGTRRPRTIRNTSSSRGQQIP*PRGGRE
Trigger: CTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCC...GCGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACACCTGTACCCCTTCCTaGCCGCCCCTCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHTCTPS*PPLTSR
Trigger: CCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGT...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp TGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACCTACTGCTAAGGCAGTaGTCTGGGCGCCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CLPPWTYGLVTSCGSPWDLLLRQ*SGRRRP
Trigger: AGGCCTGCGGCGCCCAGATCACTGCCTTAGCAGTAG...GTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp ATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCCTACTGCTAAGGCAGTaGTCTGGGCGCCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IRMGTRRPRTIRNTSSSRLLLRQ*SGRRRP
Trigger: AGGCCTGCGGCGCCCAGATCACTGCCTTAGCAGTAG...GCGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR TCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGAGTCCCGTAGGGGGCTaGTGGAGCAGGGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSSPVGG*WSRATS
Trigger: TGAGGTGGCCCTGCTCCATCAGCCCCCTACGGGACT...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGCGGGGCTTCGCTGTGTaGCCTTGGGCTGGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWRGFAV*PWAGVW
Trigger: CCAGACGCCAGCCCAAGGTCACACAGCGAAGCCCCG...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR GCA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGCCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGCCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCACCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCAGGGTTCCCACCTGCTaGCTGGGAACCAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSRVPTC*LGTRPT
Trigger: GGTGGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCT...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCACCCAGGGTTCCCACCTaGTGCCTGGGAACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPAPRVPT*CLGTRP
Trigger: GGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCTGGG...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGGGTTCCTGCAGGACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCCCTGTGAGCCTGGCCTaGCCACGTCCCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: LGSCRTWLGHHPASLISTPVSLA*PRPPPF
Trigger: GAAGGGTGGGGGACGTGGGCAGGCCAGGCTCACAGG...GGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp GGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCCTGGGCCTGGGTTCCTaGAGGACCTGGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GSAVLKTRTPQAQGPRCALGLGS*RTWLGH
Trigger: GTGCCCAAGCCAGGTCCTGCAGGAACCCAGGCCCAG...GGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACTCTCCAGGAACCCCTaGCCCGCCTCACCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGLSRNP*PASPVS
Trigger: AGACACTGGTGAGGCGGGGCAGGGGTTCCTGGAGAG...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCTAGCAGGGGTGGATaGTCCCCCGCCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: PWTYGLVTSCGSPWDTGSASRGG*SPAHFL
Trigger: CAGGAAGTGGGCGGGGGAGCATCCACCCCTGCTAGC...AGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGAGATCAGGGCCACAGCTaGCGGCTAGCAGGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGDQGHS*RLAGVD
Trigger: ATCCACCCCTGCTAGCCGGCAGCTGTGGCCCTGATC...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCACCCCGCCACGGTCGCTaGAGCAGTGGTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPPRHGR*SSGGSH
Trigger: GTGGCTTCCACCACTGCTCCAGCGACCGTGGCGGGG...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp ACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: TIRMGTRRPRTIRNTSSSRAVRF*YPPEVT
Trigger: GGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG...GGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: GHHKDGHPAATDHPEHQLAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...GAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCTGCCCTCTCCCCACCTaGGTCAGCGGCCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPCPLPT*VSGPLE
Trigger: CTCCAGGGGGCCGCTGACCCAGGTGGGGAGAGGGCA...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACGGTTCCTGCAGGACCTaGCTTGGGCACCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHGSCRT*LGHHPA
Trigger: TGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACC...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGGTCTGGGTCCCTCCCTaGGCCTGGGTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGVWVPP*AWVPAG
Trigger: TCCTGCAGGAACCCAGGCCCAGGGAGGGACCCAGAC...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCAGTCTGGGTCCCTCCCTaGGCCTGGGTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTIRMGTRRPRTIRNTSSVWVPP*AWVPAG
Trigger: TCCTGCAGGAACCCAGGCCCAGGGAGGGACCCAGAC...TGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGAAGGATTGGGGCCCAGGCACTTTGGTGAGGCCAGTGGAGGCCACAGTCCCACGCCTCACCAGTGTCTaGGTCCCTCCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EKDWGPGTLVRPVEATVPRLTSV*VPPWAW
Trigger: CCAGGCCCAGGGAGGGACCCAGACACTGGTGAGGCG...TGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCCCCACCTGGGGCCCCTaGGCATGGAGAAGGATTGGG +
Preference number: 4 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQAPTWGP*AWRRIG
Trigger: CCCAATCCTTCTCCATGCCCAGGGGCCCCAGGTGGG...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCACGGTGGAATCCCGCCTaGTTCGGAAGCTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPARWNPA*FGSSAP
Trigger: GGGGGCGGAGCTTCCGAACCAGGCGGGATTCCACCG...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433119.5
3UTR CAA 72 bp CCAAGGCGGTCCCCCTCGAGGATGTCGGTGCCTGCATaGTATACCACCACGTCGGGCAGGTGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRRSPSRMSVPA*YTTTSGRCSWR
Trigger: CCTCCAGGAGCACCTGCCCGACGTGGTGGTATACAATGCAGGCACCGACATCCTCGAGGGGGACCGCCTTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR TCA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGTGCGGAGACGCTGGGTaGCTCAGGCCCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQCGDAG*LRPNEP
Trigger: GGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCA...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GTCAGGGCACTGCAGGGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VRALQGEAAVCLSSVRRRGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...GCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCCCTGCAGTGCCCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCACCTGTACCCCTTCCTaGCCGCCCCTCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSTCTPS*PPLTSR
Trigger: CCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGT...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCCAGGCACTTTGGTaGGGCCAGTGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PGSAVLKTRTPQAQGPRCAQALW*GQWRPQ
Trigger: CTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGC...ACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: RFWYPPEVTIRMGTRRPRTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...CCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCCCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAAGGGTTCCCACCTGCTaGCTGGGAACCAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPRVPTC*LGTRPT
Trigger: GGTGGGCCTGGTTCCCAGGCAGCAGGTGGGAACCCT...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCAGGGCCACCCTGTGAGCCTGGCCTaGCCACGTCCCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: PPHCNEHKSRRGLMEQGHPVSLA*PRPPPF
Trigger: GAAGGGTGGGGGACGTGGGCAGGCCAGGCTCACAGG...GTGGCCCTGCTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCCTCTCCAGGAACCCCTaGCCCGCCTCACCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSLSRNP*PASPVS
Trigger: AGACACTGGTGAGGCGGGGCAGGGGTTCCTGGAGAG...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCTCTCCAGGAACCCCTaGCCCGCCTCACCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: HHKDGHPAATDHPEHQLILSRNP*PASPVS
Trigger: AGACACTGGTGAGGCGGGGCAGGGGTTCCTGGAGAG...GATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR GCA 90 bp ACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCTGTGAGCCTGGCCTGGCTAGCAGGGGTGGATaGTCCCCCGCCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: TWLGHHPASLISTCEPGLASRGG*SPAHFL
Trigger: CAGGAAGTGGGCGGGGGAGCATCCACCCCTGCTAGC...CAGGCCAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCGATCAGGGCCACAGCTaGCGGCTAGCAGGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCDQGHS*RLAGVD
Trigger: ATCCACCCCTGCTAGCCGGCAGCTGTGGCCCTGATC...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGTGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: RFWYPPEVTIRMGTRRPRWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...CCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PEVTIRMGTRRPRTIRNTRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...GGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: EVTIRMGTRRPRTIRNTSRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...GCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp TGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: CLPPWTYGLVTSCGSPWDRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...GTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCGGATGGTTCCTCCTGTCTaGGTCCGAAGGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AVRFWYPPEVTIRMGTRRMVPPV*VRRGLS
Trigger: GCTGAGGCCCCTTCGGACCCAGACAGGAGGAACCAT...CCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQRAVRF*YPPEVT
Trigger: GGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLRAVRF*YPPEVT
Trigger: GGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: HKDGHPAATDHPEHQLIPASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...CGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp GGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCGGAACCAGGCCCACCTaGAGACCTAGCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GEAAVCLSSVRRRWVTQAGTRPT*RPSSST
Trigger: GGTGCTGGAGCTAGGTCTCCAGGTGGGCCTGGTTCC...GGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGGGAACCAGGCCCACCTaGAGACCTAGCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGGTRPT*RPSSST
Trigger: GGTGCTGGAGCTAGGTCTCCAGGTGGGCCTGGTTCC...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCGGAACCAGGCCCACCTaGAGACCTAGCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: HHKDGHPAATDHPEHQLIGTRPT*RPSSST
Trigger: GGTGCTGGAGCTAGGTCTCCAGGTGGGCCTGGTTCC...GATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTCCCCACAGAAGGGCCTaGGAAGGCAGGTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: PWTYGLVTSCGSPWDTGSPHRRA*EGRSRP
Trigger: AGGTCTGGACCTGCCTTCCCAGGCCCTTCTGTGGGG...AGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGAAGGATTGGGGCCCAGGCACTTTGGTGAGGCCAGTGGAGGCCACAGTCCCAGCTAAGGCAGTGATCTaGGCGCCGCAGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EKDWGPGTLVRPVEATVPAKAVI*APQAFP
Trigger: GGGGAAGGCCTGCGGCGCCCAGATCACTGCCTTAGC...TGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTGCTAAGGCAGTGATCTaGGCGCCGCAGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPAKAVI*APQAFP
Trigger: GGGGAAGGCCTGCGGCGCCCAGATCACTGCCTTAGC...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGCAGGACCTGGCTTaGGCACCACCCTGCATCCCT +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSLQDLA*APPCIP
Trigger: AGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAG...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGCTGCAGGACCTGGCTTaGGCACCACCCTGCATCCCT +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGLQDLA*APPCIP
Trigger: AGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAG...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTCCCACCTGGGGCCCCTaGGCATGGAGAAGGATTGGG +
Preference number: 4 (lower is better)
Translates to: PGSAVLKTRTPQAQGPRCPTWGP*AWRRIG
Trigger: CCCAATCCTTCTCCATGCCCAGGGGCCCCAGGTGGG...ACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCCCACCTGGGGCCCCTaGGCATGGAGAAGGATTGGG +
Preference number: 4 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQPTWGP*AWRRIG
Trigger: CCCAATCCTTCTCCATGCCCAGGGGCCCCAGGTGGG...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGAACAGGCCAGAGGTCTaGCCCACCTGGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGNRPEV*PTWGPW
Trigger: CCAGGGGCCCCAGGTGGGCCAGACCTCTGGCCTGTT...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp TGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACGCAGGGCCACCTCAATaGACCCACTTTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CLPPWTYGLVTSCGSPWDAGPPQ*THFPSP
Trigger: TGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGC...GTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCGCAGGGCCACCTCAATaGACCCACTTTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PEVTIRMGTRRPRTIRNTAGPPQ*THFPSP
Trigger: TGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGC...GGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CCA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCGAGGCCGGGAGACAGTaGGAGCACCCCCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSEAGRQ*EHPLTV
Trigger: TACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTC...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGTCGCTGGAGCAGTGGTaGAAGCCACCCCCATTATGG +
Preference number: 4 (lower is better)
Translates to: RFWYPPEVTIRMGTRRPRSLEQW*KPPPLW
Trigger: CCATAATGGGGGTGGCTTCCACCACTGCTCCAGCGA...CCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCACTTAGCCGCGTCCTCTaGGGGCAGAGCTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPALSRVL*GQSSGR
Trigger: TCGGCCAGAGCTCTGCCCCCAGAGGACGCGGCTAAG...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR TCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGCTCCACCTTCCGCCTaGTGGCCTGCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWAPPSA*WPAWQS
Trigger: GCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGC...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCGCTCCACCTTCCGCCTaGTGGCCTGCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPAPPSA*WPAWQS
Trigger: GCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGC...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCTCCACCTTCCGCCTaGTGGCCTGCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PGSAVLKTRTPQAQGPRCAPPSA*WPAWQS
Trigger: GCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGC...ACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GHHKDGHPAATDHPEHQLLLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...GAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: HKDGHPAATDHPEHQLIPLLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...CGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGGTGACTCAGGCCCAATaGGCCCCAGGCCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: HKDGHPAATDHPEHQLIPVTQAQ*APGQTD
Trigger: ATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCAC...CGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGAAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp ACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCTGTGAGCCTGGCCTGGGGCAGCAAATCCCATaGCCAAGGGGAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TWLGHHPASLISTCEPGLGQQIP*PRGGRE
Trigger: CTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCC...CAGGCCAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGCAGCAAATCCCATaGCCAAGGGGAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPAGQQIP*PRGGRE
Trigger: CTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCC...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGAGGGGGAACTCCAGATaGGGGAACCCACCTGTACCC +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSRGNSR*GNPPVP
Trigger: GGGTACAGGTGGGTTCCCTCATCTGGAGTTCCCCCT...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCACCTGATTTCCACCTGTaGGCCTGGCCTGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPPDFHL*AWPAHV
Trigger: GACGTGGGCAGGCCAGGCTCACAGGTGGAAATCAGG...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GGAACTCCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCGCCCAGGCACTTTGGTaGGGCCAGTGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GTPDEGTHLYPFLTAPHIAQALW*GQWRPQ
Trigger: CTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGC...GATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGGAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGATGGAGCAGGGCCACCTCAATGGACCCACTTTCCCTCCCCAGCCCCTGATTGCCCAGGCACTTTGGTaGGGCCAGTGGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LMEQGHLNGPTFPPQPLIAQALW*GQWRPQ
Trigger: CTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGC...AATCAGGGGCTGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGCTCCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGAACCATGTCTGTGGCTaGGCCCCAGAAGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGNHVCG*APEVAG
Trigger: GCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTT...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCGGGCTCCACCTTCCGCCTaGTGGCCTCTTGAGCTCATT +
Preference number: 4 (lower is better)
Translates to: AVRFWYPPEVTIRMGTRRAPPSA*WPLELI
Trigger: AATGAGCTCAAGAGGCCATCAGGCGGAAGGTGGAGC...CCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404548.5
CDS-3UTR TCA 90 bp GGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCGCTCCACCTTCCGCCTaGTGGCCTCTTGAGCTCATT +
Preference number: 4 (lower is better)
Translates to: GHHKDGHPAATDHPEHQLAPPSA*WPLELI
Trigger: AATGAGCTCAAGAGGCCATCAGGCGGAAGGTGGAGC...GAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404548.5
ENST00000405025.5
CDS-3UTR TCA 90 bp TCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGTGGCCCTGCCGCCTGTaGCCTAAGGAGCCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: SAMMRAVRFWYPPEVTIRWPCRL*PKEPRD
Trigger: GTCACGGGGCTCCTTAGGTCACAGGCGGCAGGGCCA...CCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR GCA 90 bp ATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCCCGGCATCAAAGGGATaGAGCTTCTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: IRMGTRRPRTIRNTSSSRPASKG*SFSRPM
Trigger: CATGGGCCTGGAGAAGCTGCATCCCTTTGATGCCGG...GCGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp TGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACCCGGCATCAAAGGGATaGAGCTTCTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: CLPPWTYGLVTSCGSPWDPASKG*SFSRPM
Trigger: CATGGGCCTGGAGAAGCTGCATCCCTTTGATGCCGG...GTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp TGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: CLPPWTYGLVTSCGSPWDTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...GTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGAATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: HHKDGHPAATDHPEHQLISQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...GATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp GCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGCCAGGGCCCTCGCTGTaGCTGGGACCTAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: AMMRAVRFWYPPEVTIRMPGPSL*LGPSLS
Trigger: GGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTGG...CATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGTCCCACCCAGGGCCCTaGCCCGGCTACCTATGTTCA +
Preference number: 4 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLSHPGP*PGYLCS
Trigger: TGAACATAGGTAGCCGGGGCAGGGCCCTGGGTGGGA...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACTGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CGGACCATCCGGAACACCAGCTCATCCCGCTTCACGATGCCCGCTGGGCTGATGCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RTIRNTSSSRFTMPAGLMRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...CATCAGCCCAGCGGGCATCGTGAAGCGGGATGAGCTGGTGTTCCGGATGGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR CCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHGKAVP*VDVAVV
Trigger: TACAACCGCCACATCTACCCAGGGGACCGCTTTGCC...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGAGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGGKAVP*VDVAVV
Trigger: TACAACCGCCACATCTACCCAGGGGACCGCTTTGCC...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CAAGGCGGTCCCCCTCGAGGATGTCGGTGCCTGCATTGTATACCACCACGTCGGGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: QGGPPRGCRCLHCIPPRRAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...CCGACGTGGTGGTATACAATGCAGGCACCGACATCCTCGAGGGGGACCGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR CCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGCTGGTGACTTCGTGTaGGTCCCCCTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWAGDFV*VPLGHR
Trigger: CCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGC...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGGAACCAGGCCCACCTaGAGACCTAGCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPGTRPT*RPSSST
Trigger: GGTGCTGGAGCTAGGTCTCCAGGTGGGCCTGGTTCC...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GAGAAGGATTGGGGCCCAGGCACTTTGGTGAGGCCAGTGGAGGCCACAGTCCCACCCCACAGAAGGGCCTaGGAAGGCAGGTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: EKDWGPGTLVRPVEATVPPHRRA*EGRSRP
Trigger: AGGTCTGGACCTGCCTTCCCAGGCCCTTCTGTGGGG...TGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGCTAAGGCAGTGATCTaGGCGCCGCAGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPAKAVI*APQAFP
Trigger: GGGGAAGGCCTGCGGCGCCCAGATCACTGCCTTAGC...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGAAGGATTGGGGCCCAGGCACTTTGGTGAGGCCAGTGGAGGCCACAGTCCCAGGTTCCTGCAGGACCTaGCTTGGGCACCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: EKDWGPGTLVRPVEATVPGSCRT*LGHHPA
Trigger: TGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACC...TGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAGGTTCCTGCAGGACCTaGCTTGGGCACCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPGSCRT*LGHHPA
Trigger: TGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACC...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACGTCTGGGTCCCTCCCTaGGCCTGGGTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GSIREAGRQWEHPLTVMNVWVPP*AWVPAG
Trigger: TCCTGCAGGAACCCAGGCCCAGGGAGGGACCCAGAC...GTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACGGCATGGAGAAGGATTaGGGCCCAGGCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHGMEKD*GPGTLV
Trigger: CACCAAAGTGCCTGGGCCCCAATCCTTCTCCATGCC...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGAACAGGCCAGAGGTCTaGCCCACCTGGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWNRPEV*PTWGPW
Trigger: CCAGGGGCCCCAGGTGGGCCAGACCTCTGGCCTGTT...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGATGGAGCAGGGCCACCTCAATGGACCCACTTTCCCTCCCCAGCCCCTGATTCCCCCGCCCACTTCCTaGAGGTCCCTGAATGTCCCC +
Preference number: 4 (lower is better)
Translates to: LMEQGHLNGPTFPPQPLIPPPTS*RSLNVP
Trigger: GGGGACATTCAGGGACCTCCAGGAAGTGGGCGGGGG...AATCAGGGGCTGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGCTCCATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGAAGGATTGGGGCCCAGGCACTTTGGTGAGGCCAGTGGAGGCCACAGTCCCAGAGGCCGGGAGACAGTaGGAGCACCCCCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: EKDWGPGTLVRPVEATVPEAGRQ*EHPLTV
Trigger: TACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTC...TGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGCGGTCGCTGGAGCAGTaGTGGAAGCCACCCCCATTA +
Preference number: 4 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGRSLEQ*WKPPPL
Trigger: TAATGGGGGTGGCTTCCACCACTGCTCCAGCGACCG...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCGCTCCACCTTCCGCCTaGTGGCCTGCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGAPPSA*WPAWQS
Trigger: GCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGC...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGLLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GSAVLKTRTPQAQGPRCALLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...GGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: HKDGHPAATDHPEHQLIPVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...CGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGGTGACTCAGGCCCAATaGGCCCCAGGCCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGVTQAQ*APGQTD
Trigger: ATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCAC...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGTGACTCAGGCCCAATaGGCCCCAGGCCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: PWTYGLVTSCGSPWDTGSVTQAQ*APGQTD
Trigger: ATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCAC...AGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGTGCGGAGACGCTGGGTaGCTCAGGCCCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRCGDAG*LRPNEP
Trigger: GGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCA...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGTGCGGAGACGCTGGGTaGCTCAGGCCCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWCGDAG*LRPNEP
Trigger: GGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCA...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp ACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: TIRMGTRRPRTIRNTSSSKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...GGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp AGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCCCCCTCCATGCTCACTaGAGGCTGCCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: SMESAMMRAVRFWYPPEVPLHAH*RLPPPP
Trigger: GGGTGGTGGAGGCAGCCTTCAGTGAGCATGGAGGGG...GACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCAGGGCCACACCTGTACCCCTTCCTaGCCGCCCCTCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: PPHCNEHKSRRGLMEQGHTCTPS*PPLTSR
Trigger: CCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGT...GTGGCCCTGCTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAAGGGGGAACTCCAGATaGGGGAACCCACCTGTACCC +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPRGNSR*GNPPVP
Trigger: GGGTACAGGTGGGTTCCCTCATCTGGAGTTCCCCCT...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGAGGGGGAACTCCAGATaGGGGAACCCACCTGTACCC +
Preference number: 4 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLRGNSR*GNPPVP
Trigger: GGGTACAGGTGGGTTCCCTCATCTGGAGTTCCCCCT...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp TCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCAAGGGGGAACTCCAGATaGGGGAACCCACCTGTACCC +
Preference number: 4 (lower is better)
Translates to: SEFCAETLGDSGPMSPRPRGNSR*GNPPVP
Trigger: GGGTACAGGTGGGTTCCCTCATCTGGAGTTCCCCCT...TGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp ACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCACCACCCTGCATCCCTaGTTTCCACCTGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TIRMGTRRPRTIRNTSSSTTLHP*FPPVSL
Trigger: CAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGT...GGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR TCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGAGTCCCGTAGGGGGCTaGTGGAGCAGGGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWSPVGG*WSRATS
Trigger: TGAGGTGGCCCTGCTCCATCAGCCCCCTACGGGACT...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAAACCATGTCTGTGGCTaGGCCCCAGAAGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPNHVCG*APEVAG
Trigger: GCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTT...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PEVTIRMGTRRPRTIRNTRVSGT*WYSWVV
Trigger: CACAACCCAGCTGTACCAGCATGTGCCAGAGACACG...GGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp ACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCCGGCATCAAAGGGATaGAGCTTCTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: TIRMGTRRPRTIRNTSSSPASKG*SFSRPM
Trigger: CATGGGCCTGGAGAAGCTGCATCCCTTTGATGCCGG...GGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGCCGGCATCAAAGGGATaGAGCTTCTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGPASKG*SFSRPM
Trigger: CATGGGCCTGGAGAAGCTGCATCCCTTTGATGCCGG...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp GGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCCGGCATCAAAGGGATaGAGCTTCTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GEAAVCLSSVRRRWVTQAPASKG*SFSRPM
Trigger: CATGGGCCTGGAGAAGCTGCATCCCTTTGATGCCGG...GGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTCCGGCATCAAAGGGATaGAGCTTCTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: PWTYGLVTSCGSPWDTGSPASKG*SFSRPM
Trigger: CATGGGCCTGGAGAAGCTGCATCCCTTTGATGCCGG...AGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp ACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: TIRMGTRRPRTIRNTSSSTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...GGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp GGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GEAAVCLSSVRRRWVTQAMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...GGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp GTCAGGGCACTGCAGGGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: VRALQGEAAVCLSSVRRRMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...GCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCCCTGCAGTGCCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 4 (lower is better)
Translates to: RAVRFWYPPEVTIRMGTRSQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...CCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp GGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCGATAGAGATCCTCGCTaGCCTCTCTCCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: GSAVLKTRTPQAQGPRCADRDPR*PLSRNP
Trigger: GGGGTTCCTGGAGAGAGGGCAGCGAGGATCTCTATC...GGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: VTIRMGTRRPRTIRNTSSWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...TGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCACGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTATGGTTCCTCCTGTCTaGGTCCGAAGGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPMVPPV*VRRGLS
Trigger: GCTGAGGCCCCTTCGGACCCAGACAGGAGGAACCAT...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGATGGTTCCTCCTGTCTaGGTCCGAAGGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQMVPPV*VRRGLS
Trigger: GCTGAGGCCCCTTCGGACCCAGACAGGAGGAACCAT...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp ACGGCAAGGGTAGGGATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCACCCCGCCACGGTCGCTaGAGCAGTGGTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TARVGISECIVRASGSGPPRHGR*SSGGSH
Trigger: GTGGCTTCCACCACTGCTCCAGCGACCGTGGCGGGG...TGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: GSAVLKTRTPQAQGPRCAGKAVP*VDVAVV
Trigger: TACAACCGCCACATCTACCCAGGGGACCGCTTTGCC...GGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GTCAGGGCACTGCAGGGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: VRALQGEAAVCLSSVRRRGKAVP*VDVAVV
Trigger: TACAACCGCCACATCTACCCAGGGGACCGCTTTGCC...GCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCCCTGCAGTGCCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRRAVRF*YPPEVT
Trigger: GGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWRAVRF*YPPEVT
Trigger: GGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCCCCCACAGAAGGGCCTaGGAAGGCAGGTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPPHRRA*EGRSRP
Trigger: AGGTCTGGACCTGCCTTCCCAGGCCCTTCTGTGGGG...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp ACGGCAAGGGTAGGGATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCACGCCTCACCAGTGTCTaGGTCCCTCCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TARVGISECIVRASGSGPRLTSV*VPPWAW
Trigger: CCAGGCCCAGGGAGGGACCCAGACACTGGTGAGGCG...TGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCCCCCGCCCACTTCCTaGAGGTCCCTGAATGTCCCC +
Preference number: 4 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMEPPPTS*RSLNVP
Trigger: GGGGACATTCAGGGACCTCCAGGAAGTGGGCGGGGG...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGCCACCTCAATaGACCCACTTTCCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPAGPPQ*THFPSP
Trigger: TGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGC...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCTTGTGTGTAGCCCGGTaGAATCCCGCCTGGTTCGGA +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCLCVAR*NPAWFG
Trigger: TCCGAACCAGGCGGGATTCCACCGGGCTACACACAA...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR CCA 90 bp CATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGACATGCTGGTACAGCTaGGTTGTGTGTAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: HKDGHPAATDHPEHQLIPTCWYS*VVCSPV
Trigger: CACCGGGCTACACACAACCCAGCTGTACCAGCATGT...CGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR CCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGTCGCTGGAGCAGTGGTaGAAGCCACCCCCATTATGG +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGSLEQW*KPPPLW
Trigger: CCATAATGGGGGTGGCTTCCACCACTGCTCCAGCGA...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGCACGCTTGTCGTCCATaGAGTCTCGCTCATGCCCAT +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGHACRP*SLAHAH
Trigger: ATGGGCATGAGCGAGACTTCATGGACGACAAGCGTG...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGGCTCCACCTTCCGCCTaGTGGCCTGCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRAPPSA*WPAWQS
Trigger: GCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGC...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp TCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCACTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SEFCAETLGDSGPMSPRPLLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...TGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCACTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPALLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: HHKDGHPAATDHPEHQLIVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...GATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp GGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSAVLKTRTPQAQGPRCAVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...GGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGTGCGGAGACGCTGGGTaGCTCAGGCCCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLCGDAG*LRPNEP
Trigger: GGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCA...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMEGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CAGGGCCCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QGPRCAWDLACPLQFSVNGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGGGACCTATGGGCTGGTaGCTTCGTGTGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWGPMGW*LRVGPP
Trigger: AGGGGGACCCACACGAAGTCACCAGCCCATAGGTCC...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGGGGCAGCAAATCCCATaGCCAAGGGGAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRGQQIP*PRGGRE
Trigger: CTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCC...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGCTACTGCTAAGGCAGTaGTCTGGGCGCCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWLLLRQ*SGRRRP
Trigger: AGGCCTGCGGCGCCCAGATCACTGCCTTAGCAGTAG...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCACCACCCTGCATCCCTaGTTTCCACCTGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPTTLHP*FPPVSL
Trigger: CAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: HHKDGHPAATDHPEHQLIRVSGT*WYSWVV
Trigger: CACAACCCAGCTGTACCAGCATGTGCCAGAGACACG...GATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCCGGCATCAAAGGGATaGAGCTTCTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPPASKG*SFSRPM
Trigger: CATGGGCCTGGAGAAGCTGCATCCCTTTGATGCCGG...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCCCGGCATCAAAGGGATaGAGCTTCTCCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPPASKG*SFSRPM
Trigger: CATGGGCCTGGAGAAGCTGCATCCCTTTGATGCCGG...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACCTCGCTCATGCCCATTaGCCTGATGGGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHLAHAH*PDGHQD
Trigger: ATCTTGATGCCCATCAGGGCAATGGGCATGAGCGAG...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: PEVTIRMGTRRPRTIRNTEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...GGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: HKDGHPAATDHPEHQLIPPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...CGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCSQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 4 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQASQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGATGGAGCAGGGCCACCTCAATGGACCCACTTTCCCTCCCCAGCCCCTGATTGCTGAGGCCCGTCCTTaGGCTAAGAATTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LMEQGHLNGPTFPPQPLIAEARP*AKNSSP
Trigger: GGGGGAGGAATTCTTAGCGCAAGGACGGGCCTCAGC...AATCAGGGGCTGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGCTCCATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCGCTGAGGCCCGTCCTTaGGCTAAGAATTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGAEARP*AKNSSP
Trigger: GGGGGAGGAATTCTTAGCGCAAGGACGGGCCTCAGC...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR GCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAGATAGAGATCCTCGCTaGCCTCTCTCCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPDRDPR*PLSRNP
Trigger: GGGGTTCCTGGAGAGAGGGCAGCGAGGATCTCTATC...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGTCCCACCCAGGGCCCTaGCCCGGCTACCTATGTTCA +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRSHPGP*PGYLCS
Trigger: TGAACATAGGTAGCCGGGGCAGGGCCCTGGGTGGGA...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GHHKDGHPAATDHPEHQLVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...GAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RAVRFWYPPEVTIRMGTRVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...CCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp AAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATCCCCGCCACGGTCGCTaGAGCAGTGGTGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KPCLWLSPRSRWPVLGVNPRHGR*SSGGSH
Trigger: GTGGCTTCCACCACTGCTCCAGCGACCGTGGCGGGG...ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPGKAVP*VDVAVV
Trigger: TACAACCGCCACATCTACCCAGGGGACCGCTTTGCC...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPGKAVP*VDVAVV
Trigger: TACAACCGCCACATCTACCCAGGGGACCGCTTTGCC...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: EVTIRMGTRRPRTIRNTSSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...GCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: PEVTIRMGTRRPRTIRNTSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...GGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCGGGCTGTGCGCTTCTaGTACCCGCCTGAGGTCACC +
Preference number: 4 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLRAVRF*YPPEVT
Trigger: GGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCAGGGCCACGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: PPHCNEHKSRRGLMEQGHASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...GTGGCCCTGCTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGGGAACCAGGCCCACCTaGAGACCTAGCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWGTRPT*RPSSST
Trigger: GGTGCTGGAGCTAGGTCTCCAGGTGGGCCTGGTTCC...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTGACATTTTGTGATCTTGGAACCTGCCCTCTCCCCACCTaGGTCAGCGGCCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGVWSRRPALLTFCDLGTCPLPT*VSGPLE
Trigger: CTCCAGGGGGCCGCTGACCCAGGTGGGGAGAGGGCA...GGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGCTGCAGGACCTGGCTTaGGCACCACCCTGCATCCCT +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWLQDLA*APPCIP
Trigger: AGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAG...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCAGCCCCAGAAGTCGCTaGCCTGTGTTGGGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSSPRSR*PVLGVN
Trigger: ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCT...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp ACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCAGCCCCAGAAGTCGCTaGCCTGTGTTGGGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: TIRMGTRRPRTIRNTSSSSPRSR*PVLGVN
Trigger: ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCT...GGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CCA 90 bp GTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCAACATGCTGGTACAGCTaGGTTGTGTGTAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: VTIRMGTRRPRTIRNTSSTCWYS*VVCSLA
Trigger: CGCCAGGCTACACACAACCCAGCTGTACCAGCATGT...TGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405025.5
CDS-3UTR CCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCCGGTCGCTGGAGCAGTaGTGGAAGCCACCCCCATTA +
Preference number: 4 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPRSLEQ*WKPPPL
Trigger: TAATGGGGGTGGCTTCCACCACTGCTCCAGCGACCG...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR TCA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCACGCTTGTCGTCCATaGAGTCTCGCTCATGCCCAT +
Preference number: 4 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQHACRP*SLAHAH
Trigger: ATGGGCATGAGCGAGACTTCATGGACGACAAGCGTG...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCTTCACGATGGGTTGTAGACATCCATaGTGTACACACGCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: GTRRPRTIRNTSSSRFTMGCRHP*CTHACR
Trigger: ACGACAAGCGTGTGTACATCATGGATGTCTACAACC...CATCGTGAAGCGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR TCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGLLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CCAAGGCGGTCCCCCTCGAGGATGTCGGTGCCTGCATTGTATACCACCACGTCGGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRRSPSRMSVPALYTTTSVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...CGACGTGGTGGTATACAATGCAGGCACCGACATCCTCGAGGGGGACCGCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR TCA 90 bp GAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGTGCGGAGACGCTGGGTaGCTCAGGCCCAATGAGCCC +
Preference number: 4 (lower is better)
Translates to: EPQAKQIKYGVSNDAGCACGDAG*LRPNEP
Trigger: GGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCA...CGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAACCTGCCCCTTGCACTaGACAGGCAAGACTACTGCT +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPTCPLH*TGKTTA
Trigger: AGCAGTAGTCTTGCCTGTTCAGTGCAAGGGGCAGGT...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAAGTCCCGTAGGGGGCTaGTGGAGCAGGGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: VGCEWMLGASSQRQRPTASPVGG*WSRATS
Trigger: TGAGGTGGCCCTGCTCCATCAGCCCCCTACGGGACT...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGAACCATGTCTGTGGCTaGGCCCCAGAAGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWNHVCG*APEVAG
Trigger: GCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTT...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCACGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPARVSGT*WYSWVV
Trigger: CACAACCCAGCTGTACCAGCATGTGCCAGAGACACG...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCACTCAGCACCTTCCTCTaGACAAGGAAGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPLSTFL*TRKLGR
Trigger: CCTCCCCAACTTCCTTGTGCAGAGGAAGGTGCTGAG...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTCTCGCTCATGCCCATTaGCCTGATGGGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: PWTYGLVTSCGSPWDTGSLAHAH*PDGHQD
Trigger: ATCTTGATGCCCATCAGGGCAATGGGCATGAGCGAG...AGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTCGCTCATGCCCATTaGCCTGATGGGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: PTWVCRSQNQNTPSPGPSLAHAH*PDGHQD
Trigger: ATCTTGATGCCCATCAGGGCAATGGGCATGAGCGAG...CGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp GGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: GSAVLKTRTPQAQGPRCAEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...GGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp ACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: TIRMGTRRPRTIRNTSSSEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...GGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: PWTYGLVTSCGSPWDTGSPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...AGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp GTCAGGGCACTGCAGGGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: VRALQGEAAVCLSSVRRRPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...GCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCCCTGCAGTGCCCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGAGCCAGGGATGGCCCTaGCCCTCCATGCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRSQGWP*PSMLTE
Trigger: TTCAGTGAGCATGGAGGGGCAGGGCCATCCCTGGCT...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp ACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCACTCCGACCTGGGTCTaGCGTTCTCAAAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: TIRMGTRRPRTIRNTSSSTPTWV*RSQNQN
Trigger: GTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGT...GGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGAGGCCCAGTTAGGATaGAGGCCTAGTCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQEAQLG*RPSQDG
Trigger: TCCATCCTGACTAGGCCTGCATCCTAACTGGGCCTC...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp AAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATCTGGGCCTGGGTTCCTaGAGGACCTGGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KPCLWLSPRSRWPVLGVNLGLGS*RTWLGH
Trigger: GTGCCCAAGCCAGGTCCTGCAGGAACCCAGGCCCAG...ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp GAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTGGGCCTGGGTTCCTaGAGGACCTGGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EPQAKQIKYGVSNDAGCALGLGS*RTWLGH
Trigger: GTGCCCAAGCCAGGTCCTGCAGGAACCCAGGCCCAG...CGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR GCA 90 bp AAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATGCTAGCAGGGGTGGATaGTCCCCCGCCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: KPCLWLSPRSRWPVLGVNASRGG*SPAHFL
Trigger: CAGGAAGTGGGCGGGGGAGCATCCACCCCTGCTAGC...ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCGTAGGGATCTCAGAGTaGATTGTTAGAGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: HHKDGHPAATDHPEHQLIVGISE*IVRASG
Trigger: CCCCGAGGCTCTAACAATGCACTCTGAGATCCCTAC...GATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGACATGCTGGTACAGCTaGGTTGTGTGTAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGTCWYS*VVCSIP
Trigger: CGGGATGCTACACACAACCCAGCTGTACCAGCATGT...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGTGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQASGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCTTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACATAGCTCTTCAGCTCTaGGGCAAAGAGGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PASLDLWAGDFVWVPLGHIALQL*GKEGSK
Trigger: TTTGCTGCCCTCTTTGCCCCAGAGCTGAAGAGCTAT...GTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCATAGCTCTTCAGCTCTaGGGCAAAGAGGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PEVTIRMGTRRPRTIRNTIALQL*GKEGSK
Trigger: TTTGCTGCCCTCTTTGCCCCAGAGCTGAAGAGCTAT...GGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTGACATTTTGTGATCTTGGAACCAACAGGCCAGAGGTCTaGCCCACCTGGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LGVWSRRPALLTFCDLGTNRPEV*PTWGPW
Trigger: CCAGGGGCCCCAGGTGGGCCAGACCTCTGGCCTGTT...GGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAACATGCTGGTACAGCTaGGTTGTGTGTAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPATCWYS*VVCSLA
Trigger: CGCCAGGCTACACACAACCCAGCTGTACCAGCATGT...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522202.5
CDS-3UTR CCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAAAGCCACCCCCATTATaGTTCCTCCTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPKPPPL*FLLSGS
Trigger: GGACCCAGACAGGAGGAACCATAATGGGGGTGGCTT...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp GAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGGCTCCACCTTCCGCCTaGTGGCCTGCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: EPQAKQIKYGVSNDAGCAAPPSA*WPAWQS
Trigger: GCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGC...CGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRLLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp TCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGCTTCTGGTACCCGCCTaGGGTCACCATAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SAMMRAVRFWYPPEVTIRLLVPA*GHHKDG
Trigger: CCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAG...CCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CAGGGCCCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACGTGACTCAGGCCCAATaGGCCCCAGGCCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: QGPRCAWDLACPLQFSVNVTQAQ*APGQTD
Trigger: ATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCAC...GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGGTGACTCAGGCCCAATaGGCCCCAGGCCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRVTQAQ*APGQTD
Trigger: ATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCAC...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMEKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGATGGAGCAGGGCCACCTCAATGGACCCACTTTCCCTCCCCAGCCCCTGATTACCTGCCCCTTGCACTaGACAGGCAAGACTACTGCT +
Preference number: 4 (lower is better)
Translates to: LMEQGHLNGPTFPPQPLITCPLH*TGKTTA
Trigger: AGCAGTAGTCTTGCCTGTTCAGTGCAAGGGGCAGGT...AATCAGGGGCTGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGCTCCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCACCTGATTTCCACCTGTaGGCCTGGCCTGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: VGCEWMLGASSQRQRPTAPDFHL*AWPAHV
Trigger: GACGTGGGCAGGCCAGGCTCACAGGTGGAAATCAGG...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp ATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCACAGAAGCTCAACAGTaGCAAACCATGTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: IRMGTRRPRTIRNTSSSRTEAQQ*QTMSVA
Trigger: AGCCACAGACATGGTTTGTCACTGTTGAGCTTCTGT...GCGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR GCA 90 bp AGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCCTCAGCACCTTCCTCTaGACAAGGAAGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: REAGRQWEHPLTVMNTSPLSTFL*TRKLGR
Trigger: CCTCCCCAACTTCCTTGTGCAGAGGAAGGTGCTGAG...GGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCCTCAGCACCTTCCTCTaGACAAGGAAGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGLSTFL*TRKLGR
Trigger: CCTCCCCAACTTCCTTGTGCAGAGGAAGGTGCTGAG...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCACCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 4 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGSQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGACTCCGACCTGGGTCTaGCGTTCTCAAAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWTPTWV*RSQNQN
Trigger: GTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGT...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAACTCCGACCTGGGTCTaGCGTTCTCAAAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPATPTWV*RSQNQN
Trigger: GTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGT...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAACTCCGACCTGGGTCTaGCGTTCTCAAAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPTPTWV*RSQNQN
Trigger: GTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGT...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGCAGGTCCAGACCTTaGTTTATTGAGGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPAGRSRP*FIEGEL
Trigger: GAGTTCCCCCTCAATAAAGCAAGGTCTGGACCTGCC...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGGATAGAGATCCTCGCTaGCCTCTCTCCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMEDRDPR*PLSRNP
Trigger: GGGGTTCCTGGAGAGAGGGCAGCGAGGATCTCTATC...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGTAGGGATCTCAGAGTaGATTGTTAGAGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWVGISE*IVRASG
Trigger: CCCCGAGGCTCTAACAATGCACTCTGAGATCCCTAC...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCACATGCTGGTACAGCTaGGTTGTGTGTAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPTCWYS*VVCSIP
Trigger: CGGGATGCTACACACAACCCAGCTGTACCAGCATGT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAACATGCTGGTACAGCTaGGTTGTGTGTAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPTCWYS*VVCSIP
Trigger: CGGGATGCTACACACAACCCAGCTGTACCAGCATGT...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000446613.6
CDS-3UTR CCA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGTGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GAGTCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATATGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: ESAMMRAVRFWYPPEVTIWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...TATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCATCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPASGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GAGAAGGATTGGGGCCCAGGCACTTTGGTGAGGCCAGTGGAGGCCACAGTCCCATTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: EKDWGPGTLVRPVEATVPFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...TGGGACTGTGGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCAATCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCATTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp CTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGTTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LGLPFSKPEHPKPRALAVFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...CACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCATTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp TCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGGGCATGGAGAAGGATTaGGGCCCAGGCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SAMMRAVRFWYPPEVTIRGMEKD*GPGTLV
Trigger: CACCAAAGTGCCTGGGCCCCAATCCTTCTCCATGCC...CCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGAGCCCCAGAAGTCGCTaGCCTGTGTTGGGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGSPRSR*PVLGVN
Trigger: ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCT...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGGGCGTCTGGGCTCTCTaGGCCCTTGTTTCCGCGAGT +
Preference number: 4 (lower is better)
Translates to: ETLGDSGPMSPRPNRLSMGVWAL*ALVSAS
Trigger: ACTCGCGGAAACAAGGGCCCAGAGAGCCCAGACGCC...CATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR TCA 90 bp CAGGGCCCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACCACGCTTGTCGTCCATaGAGTCTCGCTCATGCCCAT +
Preference number: 4 (lower is better)
Translates to: QGPRCAWDLACPLQFSVNHACRP*SLAHAH
Trigger: ATGGGCATGAGCGAGACTTCATGGACGACAAGCGTG...GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCACGCTTGTCGTCCATaGAGTCTCGCTCATGCCCAT +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRHACRP*SLAHAH
Trigger: ATGGGCATGAGCGAGACTTCATGGACGACAAGCGTG...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCGGTTGTAGACATCCATaGTGTACACACGCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQAGCRHP*CTHACR
Trigger: ACGACAAGCGTGTGTACATCATGGATGTCTACAACC...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGGGTTGTAGACATCCATaGTGTACACACGCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGGCRHP*CTHACR
Trigger: ACGACAAGCGTGTGTACATCATGGATGTCTACAACC...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CAGGGCCCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACGTATGGAGTCAGCAATaGTGCGGGCTGTGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QGPRCAWDLACPLQFSVNVWSQQ*CGLCAS
Trigger: AGAAGCGCACAGCCCGCATCATTGCTGACTCCATAC...GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWRVSGT*WYSWVV
Trigger: CACAACCCAGCTGTACCAGCATGTGCCAGAGACACG...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRRVSGT*WYSWVV
Trigger: CACAACCCAGCTGTACCAGCATGTGCCAGAGACACG...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp ACGGCAAGGGTAGGGATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: TARVGISECIVRASGSGPTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...TGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp GGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: GSIREAGRQWEHPLTVMNPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...GTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp GGAACTCCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCACTCCGACCTGGGTCTaGCGTTCTCAAAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: GTPDEGTHLYPFLTAPHITPTWV*RSQNQN
Trigger: GTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGT...GATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGGAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGACTCCGACCTGGGTCTaGCGTTCTCAAAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGTPTWV*RSQNQN
Trigger: GTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGT...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp CCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCAGGGCCACGGCAGGTCCAGACCTTaGTTTATTGAGGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: PPHCNEHKSRRGLMEQGHGRSRP*FIEGEL
Trigger: GAGTTCCCCCTCAATAAAGCAAGGTCTGGACCTGCC...GTGGCCCTGCTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCGGCAGGTCCAGACCTTaGTTTATTGAGGGGGAACTC +
Preference number: 4 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGGRSRP*FIEGEL
Trigger: GAGTTCCCCCTCAATAAAGCAAGGTCTGGACCTGCC...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR GCA 90 bp CTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCAAAACCTGCCCCTTaGACTGAACAGGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: LGLPFSKPEHPKPRALAVPKPAP*TEQARL
Trigger: TAGTCTTGCCTGTTCAGTGCAAGGGGCAGGTTTTGG...CACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCCAAAACCTGCCCCTTaGACTGAACAGGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: LRPGSAVLKTRTPQAQGPPKPAP*TEQARL
Trigger: TAGTCTTGCCTGTTCAGTGCAAGGGGCAGGTTTTGG...AGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp AAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATGCTGAGGCCCGTCCTTaGGCTAAGAATTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KPCLWLSPRSRWPVLGVNAEARP*AKNSSP
Trigger: GGGGGAGGAATTCTTAGCGCAAGGACGGGCCTCAGC...ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCATGAAGTCTCGCTCATaGCCATTGCCCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPMKSRS*PLPLSS
Trigger: TGAGCTCAAGGGCAATGGGCATGAGCGAGACTTCAT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404040.5
CDS-3UTR CCA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGTGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ETLGDSGPMSPRPNRLSMRRVHD*PACLWH
Trigger: GTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCG...CATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTATGGTTCCTCCTGTCTaGGTCCGAAGGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ISECIVRASGSGPGGQHCMVPPV*VRRGLS
Trigger: GCTGAGGCCCCTTCGGACCCAGACAGGAGGAACCAT...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp AAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTATGGTTCCTCCTGTCTaGGTCCGAAGGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KLNSDKPCLWLSPRSRWPMVPPV*VRRGLS
Trigger: GCTGAGGCCCCTTCGGACCCAGACAGGAGGAACCAT...AGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTCTCCACCTTATCCAGGTACTCATCATCCTCTGTGCCCCACTCCAGCTCCACGGCAAAGCGGTCCCCTaGGTAGATGTGGCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: PLHLIQVLIILCAPLQLHGKAVP*VDVAVV
Trigger: TACAACCGCCACATCTACCCAGGGGACCGCTTTGCC...GTGGAGCTGGAGTGGGGCACAGAGGATGATGAGTACCTGGATAAGGTGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR CCA 90 bp AGCGGTGTGTCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCAATGAGCTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: SGVSEFCAETLGDSGPMSSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...GCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGACACACCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp AAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: KLNSDKPCLWLSPRSRWPASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...AGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp ACGGCAAGGGTAGGGATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: TARVGISECIVRASGSGPNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...TGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGGGTTCCTGCAGGACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCATAGCTCTTCAGCTCTaGGGCAAAGAGGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LGSCRTWLGHHPASLISTIALQL*GKEGSK
Trigger: TTTGCTGCCCTCTTTGCCCCAGAGCTGAAGAGCTAT...GGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTATAGCTCTTCAGCTCTaGGGCAAAGAGGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PGSAVLKTRTPQAQGPRCIALQL*GKEGSK
Trigger: TTTGCTGCCCTCTTTGCCCCAGAGCTGAAGAGCTAT...ACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp ACGGCAAGGGTAGGGATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGCATGGAGAAGGATTaGGGCCCAGGCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: TARVGISECIVRASGSGPGMEKD*GPGTLV
Trigger: CACCAAAGTGCCTGGGCCCCAATCCTTCTCCATGCC...TGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGATCCCTACCCTTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGTGTGTTGGGTGTGAATaGATGTTAGGTGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGCVGCE*MLGASS
Trigger: ACTCGAGGCACCTAACATCCATTCACACCCAACACA...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGGGTTCCTGCAGGACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCGGTTGTAGACATCCATaGTGTACACACGCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: LGSCRTWLGHHPASLISTGCRHP*CTHACR
Trigger: ACGACAAGCGTGTGTACATCATGGATGTCTACAACC...GGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp TCTGGGGCAAAGAGGGCAGCAAATCCCATGACCAAGGGGAGGGAGGGAGGCCCAGGTTGTAGACATCCATaGTGTACACACGCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: SGAKRAANPMTKGREGGPGCRHP*CTHACR
Trigger: ACGACAAGCGTGTGTACATCATGGATGTCTACAACC...TGGGCCTCCCTCCCTCCCCTTGGTCATGGGATTTGCTGCCCTCTTTGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGTTGTAGACATCCATaGTGTACACACGCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLGCRHP*CTHACR
Trigger: ACGACAAGCGTGTGTACATCATGGATGTCTACAACC...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CACGTCGGGCAGGTGCTCCTGGAGGGATTTCTTGATGTTCCTCTCCACCTTATCGTGACTCAGGCCCAATaGGCCCCAGGCCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: HVGQVLLEGFLDVPLHLIVTQAQ*APGQTD
Trigger: ATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCAC...GATAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR TCA 90 bp AAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTAAGCAGCGGTGTGTCTaGGTTCTGTGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: KLNSDKPCLWLSPRSRWPKQRCV*VLCGDA
Trigger: AGCGTCTCCGCACAGAACTCAGACACACCGCTGCTT...AGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCGGAGGCCAGCATTGTTaGCATTTTGTGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQAGGQHC*HFVILE
Trigger: TTCCAAGATCACAAAATGTCAACAATGCTGGCCTCC...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGACAGAAGCTCAACAGTaGCAAACCATGTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLTEAQQ*QTMSVA
Trigger: AGCCACAGACATGGTTTGTCACTGTTGAGCTTCTGT...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCACAGAAGCTCAACAGTaGCAAACCATGTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPTEAQQ*QTMSVA
Trigger: AGCCACAGACATGGTTTGTCACTGTTGAGCTTCTGT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp AGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCCTCGCTCATGCCCATTaGCCTGATGGGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: SMESAMMRAVRFWYPPEVLAHAH*PDGHQD
Trigger: ATCTTGATGCCCATCAGGGCAATGGGCATGAGCGAG...GACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTACCACGTCGGGCAGGTaGTCCTGGAGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: ISECIVRASGSGPGGQHCTTSGR*SWRDFL
Trigger: CAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGT...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSREDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp GCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGCCTCCCTGGCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: AWDLACPLQFSVNCLPPWPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...CCAGGGAGGCAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp AAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATATGCTCACTGAAGGCTaGCTCCACCACCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: KPCLWLSPRSRWPVLGVNMLTEG*LHHPMR
Trigger: CCTCATGGGGTGGTGGAGGCAGCCTTCAGTGAGCAT...ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 4 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLSQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGACATGCTGGTACAGCTaGGTTGTGTGTAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: AMMRAVRFWYPPEVTIRMTCWYS*VVCSIP
Trigger: CGGGATGCTACACACAACCCAGCTGTACCAGCATGT...CATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000446613.6
CDS-3UTR CCA 90 bp TCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SAMMRAVRFWYPPEVTIRVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...CCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp CAGGGCCCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QGPRCAWDLACPLQFSVNVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGTGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: EPQAKQIKYGVSNDAGCAWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...CGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp AAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATTGGCCAGCGTGTCTCTaGCACATGCTGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: KPCLWLSPRSRWPVLGVNWPACL*HMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCA...ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp AGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: SMESAMMRAVRFWYPPEVSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...GACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp GCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGTCGGGCAGGTGCTCCTaGAGGGATTTCTTGATGTTC +
Preference number: 4 (lower is better)
Translates to: AMMRAVRFWYPPEVTIRMSGRCS*RDFLMF
Trigger: GAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGA...CATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGAACTGCCTGCCTCCCTaGACCTATGGGCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: ETLGDSGPMSPRPNRLSMNCLPP*TYGLVT
Trigger: AGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAGTT...CATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp GAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGCACGCTTGTCGTCCATaGAGTCTCGCTCATGCCCAT +
Preference number: 4 (lower is better)
Translates to: EPQAKQIKYGVSNDAGCAHACRP*SLAHAH
Trigger: ATGGGCATGAGCGAGACTTCATGGACGACAAGCGTG...CGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp CTCGGGGTCTGGTCCAGGAGGCCAGCATTGTTGACATTTTGTGATCTTGGAACCGTGACTCAGGCCCAATaGGCCCCAGGCCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: LGVWSRRPALLTFCDLGTVTQAQ*APGQTD
Trigger: ATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCAC...GGTTCCAAGATCACAAAATGTCAACAATGCTGGCCTCCTGGACCAGACCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp GAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGACCTGCCCCTTGCACTaGACAGGCAAGACTACTGCT +
Preference number: 4 (lower is better)
Translates to: ETLGDSGPMSPRPNRLSMTCPLH*TGKTTA
Trigger: AGCAGTAGTCTTGCCTGTTCAGTGCAAGGGGCAGGT...CATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR TCA 90 bp CTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGGGAGGCCAGCATTGTTaGCATTTTGTGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LGLPFSKPEHPKPRALAVGGQHC*HFVILE
Trigger: TTCCAAGATCACAAAATGTCAACAATGCTGGCCTCC...CACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCTCAGCACCTTCCTCTaGACAAGGAAGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWLSTFL*TRKLGR
Trigger: CCTCCCCAACTTCCTTGTGCAGAGGAAGGTGCTGAG...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR GCA 90 bp AAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTTCTCAGTTAACTGCCTaGCTCCCTGGACCTATGGGC +
Preference number: 4 (lower is better)
Translates to: KLNSDKPCLWLSPRSRWPSQLTA*LPGPMG
Trigger: GCCCATAGGTCCAGGGAGGCAGGCAGTTAACTGAGA...AGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGGAGGCCCAGTTAGGATaGAGGCCTAGTCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWEAQLG*RPSQDG
Trigger: TCCATCCTGACTAGGCCTGCATCCTAACTGGGCCTC...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCAGAGGCCCAGTTAGGATaGAGGCCTAGTCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: VGCEWMLGASSQRQRPTAEAQLG*RPSQDG
Trigger: TCCATCCTGACTAGGCCTGCATCCTAACTGGGCCTC...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTCCTGTGAGCCTGGCCTaGCCACGTCCCCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGPVSLA*PRPPPF
Trigger: GAAGGGTGGGGGACGTGGGCAGGCCAGGCTCACAGG...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGATAGCTCTTCAGCTCTaGGGCAAAGAGGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRIALQL*GKEGSK
Trigger: TTTGCTGCCCTCTTTGCCCCAGAGCTGAAGAGCTAT...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CCA 90 bp GGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCACCCCCTCACTGTAATGAACTGTGTTGGGTGTGAATaGATGTTAGGTGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: GSIREAGRQWEHPLTVMNCVGCE*MLGASS
Trigger: ACTCGAGGCACCTAACATCCATTCACACCCAACACA...GTTCATTACAGTGAGGGGGTGCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCAGGGCCACTGTGTTGGGTGTGAATaGATGTTAGGTGCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: PPHCNEHKSRRGLMEQGHCVGCE*MLGASS
Trigger: ACTCGAGGCACCTAACATCCATTCACACCCAACACA...GTGGCCCTGCTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGGGTTGTAGACATCCATaGTGTACACACGCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRGCRHP*CTHACR
Trigger: ACGACAAGCGTGTGTACATCATGGATGTCTACAACC...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR TCA 90 bp CAGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGGCTCCACCTTCCGCCTaGTGGCCTGCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QALRYKNFPFSFPFTPRRAPPSA*WPAWQS
Trigger: GCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGC...CCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR TCA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGGGAGGCCAGCATTGTTaGCATTTTGTGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGGGQHC*HFVILE
Trigger: TTCCAAGATCACAAAATGTCAACAATGCTGGCCTCC...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp GTTGGGTGTGAATGGATGTTAGGTGCCTCGAGTCAGCGACAGAGACCAACGGCACTCGCTCATGCCCATTaGCCTGATGGGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: VGCEWMLGASSQRQRPTALAHAH*PDGHQD
Trigger: ATCTTGATGCCCATCAGGGCAATGGGCATGAGCGAG...TGCCGTTGGTCTCTGTCGCTGACTCGAGGCACCTAACATCCATTCACACCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCTCGCTCATGCCCATTaGCCTGATGGGCATCAAGAT +
Preference number: 4 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWLAHAH*PDGHQD
Trigger: ATCTTGATGCCCATCAGGGCAATGGGCATGAGCGAG...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp CACGTCGGGCAGGTGCTCCTGGAGGGATTTCTTGATGTTCCTCTCCACCTTATCGAGGATGTCGGTGCCTaGATTGTATACCACCACGTC +
Preference number: 4 (lower is better)
Translates to: HVGQVLLEGFLDVPLHLIEDVGA*IVYHHV
Trigger: GACGTGGTGGTATACAATGCAGGCACCGACATCCTC...GATAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR GCA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTCCTCGAGGATGTCGGTaGCTGCATTGTATACCACCA +
Preference number: 4 (lower is better)
Translates to: ISECIVRASGSGPGGQHCPRGCR*LHCIPP
Trigger: TGGTGGTATACAATGCAGGCACCGACATCCTCGAGG...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CAGAAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGACATGCTGGTACAGCTaGGTTGTGTGTAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: QKLNSDKPCLWLSPRSRWTCWYS*VVCSIP
Trigger: CGGGATGCTACACACAACCCAGCTGTACCAGCATGT...CCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295757.8
ENST00000446613.6
CDS-3UTR CCA 90 bp GAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: EPQAKQIKYGVSNDAGCAVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...CGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp GCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTGGTAGCCTCCCTGGACCTATaGGCTGGTGACTTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: AKQIKYGVSNDAGCALLVASLDL*AGDFVW
Trigger: CCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGC...TACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp AAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTGTGTTGGGTGTGAATTTCCTCACTCCGACCTaGGTCTGCCGTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: KPCLWLSPRSRWPVLGVNFLTPT*VCRSQN
Trigger: GTTTTGAGAACGGCAGACCCAGGTCGGAGTGAGGAA...ATTCACACCCAACACAGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CAA 72 bp ACCACCACGTCGGGCAGGTGCTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTATCCAGGTACTCATCA +
Preference number: 4 (lower is better)
Translates to: TTTSGRCSWRDF*MFLSTLSRYSS
Trigger: TGATGAGTACCTGGATAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGAGCACCTGCCCGACGTGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR TCA 90 bp GCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTGGTAGTGACTCAGGCCCAATaGGCCCCAGGCCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: AKQIKYGVSNDAGCALLVVTQAQ*APGQTD
Trigger: ATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCAC...TACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR GCA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTCCAAAACCTGCCCCTTaGACTGAACAGGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: ISECIVRASGSGPGGQHCPKPAP*TEQARL
Trigger: TAGTCTTGCCTGTTCAGTGCAAGGGGCAGGTTTTGG...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp GGTGACTCAGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GDSGPMSPRPNRLSMESAVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...TGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CCA 90 bp AGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGAAGCCACCCCCATTATaGTTCCTCCTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RPNEPQAKQIKYGVSNDAKPPPL*FLLSGS
Trigger: GGACCCAGACAGGAGGAACCATAATGGGGGTGGCTT...CGCATCATTGCTGACTCCATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR TCA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTACCACCCTGCATCCCTaGTTTCCACCTGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGTTLHP*FPPVSL
Trigger: CAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGT...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
3UTR CAA 72 bp TTTCATTTCCTTTCACCCCTAGGAGGTAGGGATTCTTaGCCTCCAGCACACACAGCAGCCTGGGCCAATCAA +
Preference number: 4 (lower is better)
Translates to: FHFLSPLGGRDS*PPAHTAAWANQ
Trigger: TTGATTGGCCCAGGCTGCTGTGTGTGCTGGAGGCAAAGAATCCCTACCTCCTAGGGGTGAAAGGAAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CCA 90 bp CAGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QALRYKNFPFSFPFTPRRVSGTC*YSWVVC
Trigger: ACACACAACCCAGCTGTACCAGCATGTGCCAGAGAC...CCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR GCA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTGTAGGGATCTCAGAGTaGATTGTTAGAGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGVGISE*IVRASG
Trigger: CCCCGAGGCTCTAACAATGCACTCTGAGATCCCTAC...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS CCA 90 bp TGTGTAGCCCGGTGGAATCCCGCCTGGTTCGGAAGCTCCGCCCCCTaGCGGGAGGGCCAAGCGGGTTTCACCCCGGCCTCGCGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: CVARWNPAWFGSSAP*REGQAGFTPASRKG
Trigger: CCCCTTCCGCGAGGCCGGGGTGAAACCCGCTTGGCCCTCCCGCCAGGGGGCGGAGCTTCCGAACCAGGCGGGATTCCACCGGGCTACACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS TCA 90 bp GGGCAGCCTCGGCAGAAAGCAGCTCCCTCCCGAGCCCGCCTGGACTaGCCCACCAGCCATTGCCCAGCACCACTAGCCCCTCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: GQPRQKAAPSRARLD*PTSHCPAPLAPQPQ
Trigger: CTGCGGCTGAGGGGCTAGTGGTGCTGGGCAATGGCTGGTGGGTCAGTCCAGGCGGGCTCGGGAGGGAGCTGCTTTCTGCCGAGGCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS-3UTR CAA 90 bp GCCCCACTCCAGCTCCACCTTCCGCCTGATGGCCTGCTTGGCAAAGCGGTCCCCCGCCTGATGGCCTGCTaGGCAAAGCGGTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: APLQLHLPPDGLLGKAVPRLMAC*AKRSPG
Trigger: CCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCG...GGGGACCGCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGCTGGAGTGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS CCA 90 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTaGGTTGTGTGTAGCCTGGCGCGCCCGCCCGGCCGTCCCCGCCCT +
Preference number: 5 (lower is better)
Translates to: EYTIGQRVSGTCWYS*VVCSLARPPGRPRP
Trigger: AGGGCGGGGACGGCCGGGCGGGCGCGCCAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405025.5
ENST00000405478.5
ENST00000475818.5
ENST00000522202.5
CDS-3UTR CAA 90 bp CTGCCTGCCTCCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACCTGCAGGACCTGGCTaGGGCACCACCCTGCATCCC +
Preference number: 5 (lower is better)
Translates to: LPASLDLWAGDFVWVPLGPAGPG*GTTLHP
Trigger: GGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGG...TCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGGAGGCAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp CGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCCTGCAGGACCTGGCTaGGGCACCACCCTGCATCCC +
Preference number: 5 (lower is better)
Translates to: RAVRFWYPPEVTIRMGTRPAGPG*GTTLHP
Trigger: GGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGG...CCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CAA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCCGCCTGATGGCCTGCTaGGCAAAGCGGTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCRLMAC*AKRSPG
Trigger: CCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCG...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCAGGCCTGGGGCCCAGGCACTTaGGTGAGGCCAGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PDEGTHLYPFLTAPHIQAWGPGT*VRPVEA
Trigger: GGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCA...GGCCTGGATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp CATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGGCTGGTACAGCTGGGTaGTGTGTAGCCTGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: HKDGHPAATDHPEHQLIPAGTAG*CVAWRA
Trigger: GGCGCGCCAGGCTACACACAACCCAGCTGTACCAGC...CGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405025.5
CDS-3UTR CAA 90 bp ATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGCGCGGCGAGTACACGATaGGCCAGCGTGTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: IRMGTRRPRTIRNTSSSRAASTR*ASVSLA
Trigger: TGCCAGAGACACGCTGGCCAATCGTGTACTCGCCGC...GCGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp CTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCGCCTGATGGCCTGCTaGGCAAAGCGGTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGLPFSKPEHPKPRALAVRLMAC*AKRSPG
Trigger: CCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCG...CACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp ACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCTGTGAGCCTGGCCTGCGCCTGATGGCCTGCTaGGCAAAGCGGTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: TWLGHHPASLISTCEPGLRLMAC*AKRSPG
Trigger: CCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCG...CAGGCCAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCACGCCTGATGGCCTGCTaGGCAAAGCGGTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPRLMAC*AKRSPG
Trigger: CCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCG...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTTGGGGCCCAGGCACTTaGGTGAGGCCAGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PGSAVLKTRTPQAQGPRCWGPGT*VRPVEA
Trigger: GGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCA...ACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS CCA 90 bp GTCCTGTTCCTGCGCTTCCCAAGCTGGGTAGAAACGGCGAGAGGCTaGGGGTTAGAAACGACAGGTTCCCGGCGGGCTGTGCCGGGGCTT +
Preference number: 5 (lower is better)
Translates to: VLFLRFPSWVETARG*GLETTGSRRAVPGL
Trigger: AAGCCCCGGCACAGCCCGCCGGGAACCTGTCGTTTCTAACCCCCAGCCTCTCGCCGTTTCTACCCAGCTTGGGAAGCGCAGGAACAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR CAA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGGCGGCGAGTACACGATaGGCCAGCGTGTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGAASTR*ASVSLA
Trigger: TGCCAGAGACACGCTGGCCAATCGTGTACTCGCCGC...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp GCCCCACTCCAGCTCCACCTTCCGCCTGATGGCCTGCTTGGCAAAGCGGTCCCCATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: APLQLHLPPDGLLGKAVPMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...GGGGACCGCTTTGCCAAGCAGGCCATCAGGCGGAAGGTGGAGCTGGAGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425430.5
CDS-3UTR CAA 90 bp CGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: RFWYPPEVTIRMGTRRPRMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...CCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGTCCCCAGCCCCTGATTaGATCAGGGCCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGSPAPD*IRATAA
Trigger: GGCAGCTGTGGCCCTGATCAAATCAGGGGCTGGGGA...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS CCA 90 bp TGGGTTGTGTGTAGCCTACCGTGTGGAAAAAGACAGACGCACAGCTaGGGCAGCCTCGGCAGAAAGCAGCTCCCTCCCGAGCCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: WVVCSLPCGKRQTHS*GSLGRKQLPPEPAW
Trigger: CCAGGCGGGCTCGGGAGGGAGCTGCTTTCTGCCGAGGCTGCCCCAGCTGTGCGTCTGTCTTTTTCCACACGGTAGGCTACACACAACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS-3UTR CAA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGCGGCGAGTACACGATaGGCCAGCGTGTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLAASTR*ASVSLA
Trigger: TGCCAGAGACACGCTGGCCAATCGTGTACTCGCCGC...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCGCCTGATGGCCTGCTaGGCAAAGCGGTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRRLMAC*AKRSPG
Trigger: CCCAGGGGACCGCTTTGCCAAGCAGGCCATCAGGCG...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp GTGGGAGCACCCCCTCACTGTAATGAACACAAGTCCCGTAGGGGGCTGATGGAGCCTGCAGGACCTGGCTaGGGCACCACCCTGCATCCC +
Preference number: 5 (lower is better)
Translates to: VGAPPHCNEHKSRRGLMEPAGPG*GTTLHP
Trigger: GGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGG...CTCCATCAGCCCCCTACGGGACTTGTGTTCATTACAGTGAGGGGGTGCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGTGGGGCCCAGGCACTTaGGTGAGGCCAGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRWGPGT*VRPVEA
Trigger: GGCCTCCACTGGCCTCACCAAAGTGCCTGGGCCCCA...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp GTCAGGGCACTGCAGGGGGAAGCAGCGGTGTGTCTGAGTTCTGTGCGGAGACGCGGGCATGGAGAAGGATaGGGGCCCAGGCACTTTGGT +
Preference number: 5 (lower is better)
Translates to: VRALQGEAAVCLSSVRRRGHGEG*GPRHFG
Trigger: ACCAAAGTGCCTGGGCCCCAATCCTTCTCCATGCCC...GCGTCTCCGCACAGAACTCAGACACACCGCTGCTTCCCCCTGCAGTGCCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CAA 90 bp CTGGGTTCCTGCAGGACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCTCCCCAGCCCCTGATTaGATCAGGGCCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LGSCRTWLGHHPASLISTSPAPD*IRATAA
Trigger: GGCAGCTGTGGCCCTGATCAAATCAGGGGCTGGGGA...GGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGTCCTGCAGGAACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGTCCCCAGCCCCTGATTaGATCAGGGCCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQSPAPD*IRATAA
Trigger: GGCAGCTGTGGCCCTGATCAAATCAGGGGCTGGGGA...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS GCA 90 bp CAGGTGTGCCCAAGGTCACAGTGCAGGTCTGTGGAGAAGCAGGCGTaGACTCAGGTGTGTCTGGCTGCAAGGCCTCCGCGCATCACCTCT +
Preference number: 5 (lower is better)
Translates to: QVCPRSQCRSVEKQA*TQVCLAARPPRITS
Trigger: AGAGGTGATGCGCGGAGGCCTTGCAGCCAGACACACCTGAGTGCACGCCTGCTTCTCCACAGACCTGCACTGTGACCTTGGGCACACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS CCA 90 bp GGGACCCACAGCAGAGCTCTGCACACGAGAGCAGTCCCATCAGAGTaGGCTTCAGGAAGAGCCTCATGTGGGGGCAGTCAGGAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: GTHSRALHTRAVPSE*ASGRASCGGSQEEG
Trigger: TCCCTCCTCCTGACTGCCCCCACATGAGGCTCTTCCTGAAGCCCACTCTGATGGGACTGCTCTCGTGTGCAGAGCTCTGCTGTGGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS-3UTR CAA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCGCGGCGAGTACACGATaGGCCAGCGTGTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGAASTR*ASVSLA
Trigger: TGCCAGAGACACGCTGGCCAATCGTGTACTCGCCGC...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp GTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCAATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: VTIRMGTRRPRTIRNTSSMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...TGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp CACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: HHKDGHPAATDHPEHQLIMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...GATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp ACCTGGCTTGGGCACCACCCTGCATCCCTGATTTCCACCTGTGAGCCTGGCCTGGGGCATGGAGAAGGATaGGGGCCCAGGCACTTTGGT +
Preference number: 5 (lower is better)
Translates to: TWLGHHPASLISTCEPGLGHGEG*GPRHFG
Trigger: ACCAAAGTGCCTGGGCCCCAATCCTTCTCCATGCCC...CAGGCCAGGCTCACAGGTGGAAATCAGGGATGCAGGGTGGTGCCCAAGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp GTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGGCATGGAGAAGGATaGGGGCCCAGGCACTTTGGT +
Preference number: 5 (lower is better)
Translates to: VCRSQNQNTPSPGPSLCLGHGEG*GPRHFG
Trigger: ACCAAAGTGCCTGGGCCCCAATCCTTCTCCATGCCC...CAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS TCA 90 bp GACAGACCCTGCATTTGTAGCCCGAGAGACAGAAGACAGAAGCCGTaGGAGCCGTGGGGACATGAGGAGGGAGACTCTCCTGCCCCGGGA +
Preference number: 5 (lower is better)
Translates to: DRPCICSPRDRRQKP*EPWGHEEGDSPAPG
Trigger: TCCCGGGGCAGGAGAGTCTCCCTCCTCATGTCCCCACGGCTCTCACGGCTTCTGTCTTCTGTCTCTCGGGCTACAAATGCAGGGTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS CCA 90 bp CTCAGAGAGCAGACCAGGTGTGCCCAAGGTCACAGTGCAGGTCTGTaGAGAAGCAGGCGTGCACTCAGGTGTGTCTGGCTGCAAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LREQTRCAQGHSAGL*RSRRALRCVWLQGL
Trigger: GAGGCCTTGCAGCCAGACACACCTGAGTGCACGCCTGCTTCTCCACAGACCTGCACTGTGACCTTGGGCACACCTGGTCTGCTCTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS CCA 90 bp GAAGGGGCGCGACCACCGTATGTCCTGTTCCTGCGCTTCCCAAGCTaGGTAGAAACGGCGAGAGGCTGGGGGTTAGAAACGACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: EGARPPYVLFLRFPS*VETARGWGLETTGS
Trigger: GGAACCTGTCGTTTCTAACCCCCAGCCTCTCGCCGTTTCTACCCAGCTTGGGAAGCGCAGGAACAGGACATACGGTGGTCGCGCCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS-3UTR CAA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGGCGGCGAGTACACGATaGGCCAGCGTGTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRAASTR*ASVSLA
Trigger: TGCCAGAGACACGCTGGCCAATCGTGTACTCGCCGC...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp GAGGTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCCGCTCAAACAGAAACTaGATGGCGAGCGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: EVTIRMGTRRPRTIRNTSRSNRN*MASVMS
Trigger: GGACATCACGCTCGCCATCAAGTTTCTGTTTGAGCG...GCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CAGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: QALPSAPTHRGLKPFWLPMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...TGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGGCTGGTACAGCTGGGTaGTGTGTAGCCTGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLAGTAG*CVAWRA
Trigger: GGCGCGCCAGGCTACACACAACCCAGCTGTACCAGC...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522202.5
CDS-3UTR CAA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGCTGGTACAGCTGGGTaGTGTGTAGCCCGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPAAGTAG*CVARWN
Trigger: ATTCCACCGGGCTACACACAACCCAGCTGTACCAGC...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS GCA 90 bp GTGCACTCAGGTGTGTCTGGCTGCAAGGCCTCCGCGCATCACCTCTaGACCGTAATAAATGCCCCCACAGCTGTGTGGCACAAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: VHSGVSGCKASAHHL*TVINAPTAVWHKAS
Trigger: CGAAGCCTTGTGCCACACAGCTGTGGGGGCATTTATTACGGTGCAGAGGTGATGCGCGGAGGCCTTGCAGCCAGACACACCTGAGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS-3UTR CAA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCACTCTGCACAAGGAAGTaGGGGAGGAAGATAACGGGG +
Preference number: 5 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPALCTRK*GRKITG
Trigger: CCCCGTTATCTTCCTCCCCAACTTCCTTGTGCAGAG...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp CTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGGGATCTCAGAGTGCATaGTTAGAGCCTCGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LGLPFSKPEHPKPRALAVGSQSA*LEPRGL
Trigger: CAGACCCCGAGGCTCTAACAATGCACTCTGAGATCC...CACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS CCA 90 bp CTCCAGGCCCATGAAGGTGATGTTGTAGCGCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTGGGTTGTGTG +
Preference number: 5 (lower is better)
Translates to: LQAHEGDVVARRVHD*PACLWHMLVQLGCV
Trigger: CACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCGCGCTACAACATCACCTTCATGGGCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000402271.5
ENST00000404040.5
ENST00000404548.5
ENST00000405025.5
ENST00000405478.5
ENST00000416248.5
ENST00000418189.5
ENST00000425430.5
ENST00000433119.5
ENST00000434848.5
ENST00000437379.2
ENST00000446613.6
ENST00000455904.5
ENST00000458642.5
ENST00000475818.5
ENST00000522202.5
CDS CCA 90 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTaGGTTGTGTGTAGCCAGAGGCTCAGAGAGCAGACCAGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: EYTIGQRVSGTCWYS*VVCSQRLREQTRCA
Trigger: GGCACACCTGGTCTGCTCTCTGAGCCTCTGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS-3UTR CAA 90 bp GGAACTCCAGATGAGGGAACCCACCTGTACCCCTTCCTGACCGCCCCTCACATCCTCTGCACAAGGAAGTaGGGGAGGAAGATAACGGGG +
Preference number: 5 (lower is better)
Translates to: GTPDEGTHLYPFLTAPHILCTRK*GRKITG
Trigger: CCCCGTTATCTTCCTCCCCAACTTCCTTGTGCAGAG...GATGTGAGGGGCGGTCAGGAAGGGGTACAGGTGGGTTCCCTCATCTGGAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCCGCTCAAACAGAAACTaGATGGCGAGCGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPRSNRN*MASVMS
Trigger: GGACATCACGCTCGCCATCAAGTTTCTGTTTGAGCG...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CCCTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTATGATGTACACACGCTaGTCGTCCATGAAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: PWTYGLVTSCGSPWDTGSMMYTR*SSMKSR
Trigger: GCGAGACTTCATGGACGACAAGCGTGTGTACATCAT...AGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS TCA 90 bp CTCTGCTTTGACACTTTACTCCCTAGGCGCCGAGTTCTTAAATGGTaGCCCCAGGTGCCCGAGCCAAGCCATGTGTGTGGGCATCCGCCT +
Preference number: 5 (lower is better)
Translates to: LCFDTLLPRRRVLKW*PQVPEPSHVCGHPP
Trigger: AGGCGGATGCCCACACACATGGCTTGGCTCGGGCACCTGGGGTCACCATTTAAGAACTCGGCGCCTAGGGAGTAAAGTGTCAAAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS GCA 90 bp GTCTGGCTGCAAGGCCTCCGCGCATCACCTCTGCACCGTAATAAATaGCCCCACAGCTGTGTGGCACAAGGCTTCGGCTGCAAAATGTGT +
Preference number: 5 (lower is better)
Translates to: VWLQGLRASPLHRNK*PHSCVAQGFGCKMC
Trigger: ACACATTTTGCAGCCGAAGCCTTGTGCCACACAGCTGTGGGGGCATTTATTACGGTGCAGAGGTGATGCGCGGAGGCCTTGCAGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS CCA 90 bp AGCAGCTCTGGGCAGGGGGCAGTGCCCCAAATTATTCATAAGCAATaGGGACCCACAGCAGAGCTCTGCACACGAGAGCAGTCCCATCAG +
Preference number: 5 (lower is better)
Translates to: SSSGQGAVPQIIHKQ*GPTAELCTREQSHQ
Trigger: CTGATGGGACTGCTCTCGTGTGCAGAGCTCTGCTGTGGGTCCCCATTGCTTATGAATAATTTGGGGCACTGCCCCCTGCCCAGAGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS CCA 90 bp CACAAGGACACACCCAAGATGAGGGTAGGGGCAGCAGCTTACGCTTaGCAAAGCGGTCCCCTGGGTAGATGTGGCGGTTGTAGACATCCA +
Preference number: 5 (lower is better)
Translates to: HKDTPKMRVGAAAYA*QSGPLGRCGGCRHP
Trigger: TGGATGTCTACAACCGCCACATCTACCCAGGGGACCGCTTTGCCAAGCGTAAGCTGCTGCCCCTACCCTCATCTTGGGTGTGTCCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487585.5
CDS-3UTR CAA 90 bp CATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCCGAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: HKDGHPAATDHPEHQLIPRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...CGGGATGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp CAGGGCCCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACCTCTGCACAAGGAAGTaGGGGAGGAAGATAACGGGG +
Preference number: 5 (lower is better)
Translates to: QGPRCAWDLACPLQFSVNLCTRK*GRKITG
Trigger: CCCCGTTATCTTCCTCCCCAACTTCCTTGTGCAGAG...GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp CTGATGGAGCAGGGCCACCTCAATGGACCCACTTTCCCTCCCCAGCCCCTGATTCGCTCAAACAGAAACTaGATGGCGAGCGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: LMEQGHLNGPTFPPQPLIRSNRN*MASVMS
Trigger: GGACATCACGCTCGCCATCAAGTTTCTGTTTGAGCG...AATCAGGGGCTGGGGAGGGAAAGTGGGTCCATTGAGGTGGCCCTGCTCCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp TCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCAATGATGTACACACGCTaGTCGTCCATGAAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: SEFCAETLGDSGPMSPRPMMYTR*SSMKSR
Trigger: GCGAGACTTCATGGACGACAAGCGTGTGTACATCAT...TGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp AGGCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGATGATGTACACACGCTaGTCGTCCATGAAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: RLCLLPPPIEASSPSGFQMMYTR*SSMKSR
Trigger: GCGAGACTTCATGGACGACAAGCGTGTGTACATCAT...CTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp GTCACCATAAGGATGGGCACCCGGCGGCCACGGACCATCCGGAACACCAGCTCATCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: VTIRMGTRRPRTIRNTSSSWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...TGAGCTGGTGTTCCGGATGGTCCGTGGCCGCCGGGTGCCCATCCTTATGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404548.5
ENST00000405025.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGSWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CTGGACCTATGGGCTGGTGACTTCGTGTGGGTCCCCCTGGGACACAGGCTCTGCTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: LDLWAGDFVWVPLGHRLCSWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...GCAGAGCCTGTGTCCCAGGGGGACCCACACGAAGTCACCAGCCCATAGGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS GCA 90 bp TTCCCCACCCTGAGGCAACCCGTGAGAAATTGGTTCCCCGGGAAATaGCTTGAGGACAGTTTCCAGGTGCCCTTGGATGAACTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: FPTLRQPVRNWFPGK*LEDSFQVPLDELPG
Trigger: ACCAGGGAGTTCATCCAAGGGCACCTGGAAACTGTCCTCAAGGCATTTCCCGGGGAACCAATTTCTCACGGGTTGCCTCAGGGTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498532.5
CDS-3UTR CAA 90 bp CTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGGGAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: LPSAPTHRGLKPFWLPAGRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...CCCTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGGAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: LPFSKPEHPKPRALAVPGRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...CCCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCATGATGTACACACGCTaGTCGTCCATGAAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGMMYTR*SSMKSR
Trigger: GCGAGACTTCATGGACGACAAGCGTGTGTACATCAT...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp GCTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCATCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: ALPSAPTHRGLKPFWLPASWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...TGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp TCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGCCCTCGCTGTGCCTGGTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: SAVLKTRTPQAQGPRCAWSWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...CCAGGCACAGCGAGGGCCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPSWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp AAGCTCAACAGTGACAAACCATGTCTGTGGCTGAGCCCCAGAAGTCGCTGGCCTATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: KLNSDKPCLWLSPRSRWPMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...AGGCCAGCGACTTCTGGGGCTCAGCCACAGACATGGTTTGTCACTGTTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp ACCCTTCTCCCTGCAGCAGAGGGAGCATTAGGGAGGCCGGGAGACAGTGGGAGCAGGAGGCCAGCATTGTaGACATTTTGTGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: TLLPAAEGALGRPGDSGSRRPAL*TFCDLG
Trigger: TCCAAGATCACAAAATGTCAACAATGCTGGCCTCCT...GCTCCCACTGTCTCCCGGCCTCCCTAATGCTCCCTCTGCTGCAGGGAGAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS CCA 90 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTaGGTTGTGTGTAGCCTACCGTGTGGAAAAAGACAGACGCACAGC +
Preference number: 5 (lower is better)
Translates to: EYTIGQRVSGTCWYS*VVCSLPCGKRQTHS
Trigger: GCTGTGCGTCTGTCTTTTTCCACACGGTAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS-3UTR CAA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp CTCTGCCTTCTGCCCCCACCCATAGAGGCCTCAAGCCCTTCTGGCTTCCAGCAGAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: LCLLPPPIEASSPSGFQQRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...CTGCTGGAAGCCAGAAGGGCTTGAGGCCTCTATGGGTGGGGGCAGAAGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp ATCTCAGAGTGCATTGTTAGAGCCTCGGGGTCTGGTCCAGGAGGCCAGCATTGTCTCTGCACAAGGAAGTaGGGGAGGAAGATAACGGGG +
Preference number: 5 (lower is better)
Translates to: ISECIVRASGSGPGGQHCLCTRK*GRKITG
Trigger: CCCCGTTATCTTCCTCCCCAACTTCCTTGTGCAGAG...ACAATGCTGGCCTCCTGGACCAGACCCCGAGGCTCTAACAATGCACTCTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGATGATGTACACACGCTaGTCGTCCATGAAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRMMYTR*SSMKSR
Trigger: GCGAGACTTCATGGACGACAAGCGTGTGTACATCAT...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp ATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGATGGGCTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: MMRAVRFWYPPEVTIRMGSWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...GCCCATCCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp TCTGAGTTCTGTGCGGAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCAAGGAGGCCAGCATTGTaGACATTTTGTGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: SEFCAETLGDSGPMSPRPRRPAL*TFCDLG
Trigger: TCCAAGATCACAAAATGTCAACAATGCTGGCCTCCT...TGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTCCGCACAGAACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446613.6
CDS-3UTR CAA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGTCTCGCTCATGCCCATaGCCCTTGAGCTCATTAAGA +
Preference number: 5 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRSRSCP*PLSSLR
Trigger: TCTTAATGAGCTCAAGGGCAATGGGCATGAGCGAGA...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404040.5
CDS GCA 90 bp GTGCCCCAAATTATTCATAAGCAATGGGGACCCACAGCAGAGCTCTaGACACGAGAGCAGTCCCATCAGAGTGGGCTTCAGGAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: VPQIIHKQWGPTAEL*TREQSHQSGLQEEP
Trigger: AGGCTCTTCCTGAAGCCCACTCTGATGGGACTGCTCTCGTGTGCAGAGCTCTGCTGTGGGTCCCCATTGCTTATGAATAATTTGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS-3UTR CAA 90 bp CTCACTCCGACCTGGGTCTGCCGTTCTCAAAACCAGAACACCCCAAGCCCAGGGAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: LTPTWVCRSQNQNTPSPGRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...CCCTGGGCTTGGGGTGTTCTGGTTTTGAGAACGGCAGACCCAGGTCGGAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp GAGACGCTGGGTGACTCAGGCCCAATGAGCCCCAGGCCAAACAGATTAAGTATGCGCTCAAACAGAAACTaGATGGCGAGCGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: ETLGDSGPMSPRPNRLSMRSNRN*MASVMS
Trigger: GGACATCACGCTCGCCATCAAGTTTCTGTTTGAGCG...CATACTTAATCTGTTTGGCCTGGGGCTCATTGGGCCTGAGTCACCCAGCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp CCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACTGCCTGATGATGTACACACGCTaGTCGTCCATGAAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: PRCAWDLACPLQFSVNCLMMYTR*SSMKSR
Trigger: GCGAGACTTCATGGACGACAAGCGTGTGTACATCAT...CAGGCAGTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295757.8
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp TCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: SAMMRAVRFWYPPEVTIRSWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...CCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp CTCAAGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGTCCTGGAGGGATTTCTaGATGTTCCTCTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: LKPFWLPAGKSRGRASSRSWRDF*MFLSTL
Trigger: TAAGGTGGAGAGGAACATCAAGAAATCCCTCCAGGA...CCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000404040.5
ENST00000425430.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp TCAGCAATGATGCGGGCTGTGCGCTTCTGGTACCCGCCTGAGGTCACCATAAGGAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: SAMMRAVRFWYPPEVTIRRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...CCTTATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404548.5
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp CAGGGCCCTCGCTGTGCCTGGGACCTAGCCTGTCCTCTCCAATTCTCAGTTAACAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: QGPRCAWDLACPLQFSVNRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...GTTAACTGAGAATTGGAGAGGACAGGCTAGGTCCCAGGCACAGCGAGGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000433119.5
ENST00000437379.2
ENST00000446613.6
ENST00000522202.5
CDS-3UTR CAA 90 bp GCCAAACAGATTAAGTATGGAGTCAGCAATGATGCGGGCTGTGCGCTTCTGGTAATGTCGGTGCCTGCATaGTATACCACCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: AKQIKYGVSNDAGCALLVMSVPA*YTTTSG
Trigger: GCCCGACGTGGTGGTATACAATGCAGGCACCGACAT...TACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATACTTAATCTGTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425430.5
ENST00000433119.5
ENST00000446613.6
CDS-3UTR CAA 90 bp AGCCCTTCTGGCTTCCAGCAGGGAAAAGTAGAGGAAGGGCCAGCTCCAGGCCCCGCCTCTTTTAGGAAATaGATCACTTTGCCCCATTTT +
Preference number: 5 (lower is better)
Translates to: SPSGFQQGKVEEGPAPGPASFRK*ITLPHF
Trigger: AAAATGGGGCAAAGTGATCAATTTCCTAAAAGAGGC...GGGGCCTGGAGCTGGCCCTTCCTCTACTTTTCCCTGCTGGAAGCCAGAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000402259.5
CDS GCA 90 bp CACCGTAATAAATGCCCCCACAGCTGTGTGGCACAAGGCTTCGGCTaGAAAATGTGTGGCTGTTGTGAGGACTCAGAGAATGCAACTGAG +
Preference number: 5 (lower is better)
Translates to: HRNKCPHSCVAQGFG*KMCGCCEDSENATE
Trigger: CTCAGTTGCATTCTCTGAGTCCTCACAACAGCCACACATTTTGCAGCCGAAGCCTTGTGCCACACAGCTGTGGGGGCATTTATTACGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS-3UTR CAA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTCGCTCAAACAGAAACTaGATGGCGAGCGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGRSNRN*MASVMS
Trigger: GGACATCACGCTCGCCATCAAGTTTCTGTTTGAGCG...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS-3UTR CAA 90 bp AGGCCTTGCGCTACAAGAACTTTCCATTTTCATTTCCTTTCACCCCTAGGAGGTAGGAAATTGATCACTTaGCCCCATTTTCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: RPCATRTFHFHFLSPLGGRKLIT*PHFPAS
Trigger: TGATGCCGGAAAATGGGGCAAAGTGATCAATTTCCT...ACCTCCTAGGGGTGAAAGGAAATGAAAATGGAAAGTTCTTGTAGCGCAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295757.8
ENST00000437379.2
ENST00000446613.6
CDS CCA 72 bp CGGTGGAATCCCGCCTGGTTCGGAAGCTCCGCCCCCTaGCGGGAGGGCCAAGCGGGTTTCACCCCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: RWNPAWFGSSAP*REGQAGFTPAS
Trigger: CGAGGCCGGGGTGAAACCCGCTTGGCCCTCCCGCCAGGGGGCGGAGCTTCCGAACCAGGCGGGATTCCACCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS CAA 72 bp GCCAGCGTGTCTCTGGCACATGCTGGTACAGCTGGGTaGTGTGTAGCCTGGCGCGCCCGCCCGGCCGTCCCC +
Preference number: 6 (lower is better)
Translates to: ASVSLAHAGTAG*CVAWRARPAVP
Trigger: GGGGACGGCCGGGCGGGCGCGCCAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405025.5
ENST00000405478.5
ENST00000475818.5
ENST00000522202.5
CDS CCA 72 bp TGGCAGTCGTCACCCAGAGACAGAAATCCGCCCCAGTaGCTGCCTCCGTGGGGGCGTCCGCGTAGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: WQSSPRDRNPPQ*LPPWGRPRSQG
Trigger: CCCCTGGCTACGCGGACGCCCCCACGGAGGCAGCCACTGGGGCGGATTTCTGTCTCTGGGTGACGACTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418189.5
CDS CAA 90 bp GAAAGCAGCTCCCTCCCGAGCCCGCCTGGACTGACCCACCAGCCATaGCCCAGCACCACTAGCCCCTCAGCCGCAGACAAGGGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: ESSSLPSPPGLTHQP*PSTTSPSAADKGPS
Trigger: TGAGGGGCCCTTGTCTGCGGCTGAGGGGCTAGTGGTGCTGGGCAATGGCTGGTGGGTCAGTCCAGGCGGGCTCGGGAGGGAGCTGCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS CCA 72 bp ACAGCTGGGTTGTGTGTAGCCCGGTGGAATCCCGCCTaGTTCGGAAGCTCCGCCCCCTGGCGGGAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: TAGLCVARWNPA*FGSSAPWREGQ
Trigger: TTGGCCCTCCCGCCAGGGGGCGGAGCTTCCGAACCAGGCGGGATTCCACCGGGCTACACACAACCCAGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS CCA 72 bp ATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTaGGTTGTGTGTAGCCTGGCGCGCCCGCCCGGCCGT +
Preference number: 6 (lower is better)
Translates to: IGQRVSGTCWYS*VVCSLARPPGR
Trigger: ACGGCCGGGCGGGCGCGCCAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405025.5
ENST00000405478.5
ENST00000475818.5
ENST00000522202.5
CDS CCA 72 bp GCACAGAAGCCCCCGCCACGGTCGCTGGAGCAGTGGTaGAAGCCACCCCCATTATGGTTCCTCCTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: AQKPPPRSLEQW*KPPPLWFLLSG
Trigger: CCCAGACAGGAGGAACCATAATGGGGGTGGCTTCCACCACTGCTCCAGCGACCGTGGCGGGGGCTTCTGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS CCA 72 bp ATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTaGGTTGTGTGTAGCATCCCGGGGCCGGCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: IGQRVSGTCWYS*VVCSIPGPALP
Trigger: TGGGAGGGCCGGCCCCGGGATGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000402271.5
ENST00000404040.5
ENST00000404548.5
ENST00000425430.5
ENST00000446613.6
CDS CCA 72 bp GACCCCGCTGCGCTGCTAACCCTTCCCATCACACCCTaGCAGTCGTCACCCAGAGACAGAAATCCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: DPAALLTLPITP*QSSPRDRNPPQ
Trigger: CTGGGGCGGATTTCTGTCTCTGGGTGACGACTGCCAGGGTGTGATGGGAAGGGTTAGCAGCGCAGCGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418189.5
CDS CCA 72 bp GGTCTGTGGAGAAGCAGGCGTGCACTCAGGTGTGTCTaGCTGCAAGGCCTCCGCGCATCACCTCTGCACCGT +
Preference number: 6 (lower is better)
Translates to: GLWRSRRALRCV*LQGLRASPLHR
Trigger: ACGGTGCAGAGGTGATGCGCGGAGGCCTTGCAGCCAGACACACCTGAGTGCACGCCTGCTTCTCCACAGACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS CCA 72 bp CTGCGCTTCCCAAGCTGGGTAGAAACGGCGAGAGGCTaGGGGTTAGAAACGACAGGTTCCCGGCGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LRFPSWVETARG*GLETTGSRRAV
Trigger: CACAGCCCGCCGGGAACCTGTCGTTTCTAACCCCCAGCCTCTCGCCGTTTCTACCCAGCTTGGGAAGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS CCA 72 bp TGTCCGCATAGGCACAGAAGCCCCCGCCACGGTCGCTaGAGCAGTGGTGGAAGCCACCCCCATTATGGTTCC +
Preference number: 6 (lower is better)
Translates to: CPHRHRSPRHGR*SSGGSHPHYGS
Trigger: GGAACCATAATGGGGGTGGCTTCCACCACTGCTCCAGCGACCGTGGCGGGGGCTTCTGTGCCTATGCGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433119.5
ENST00000446613.6
CDS CCA 72 bp TGTCCGCATAGGCACAGAAGCCCCCGCCACGGTCGCTaGAGCAGTGGTGGAAGCCACCCCCTTGAGCTCATT +
Preference number: 6 (lower is better)
Translates to: CPHRHRSPRHGR*SSGGSHPLELI
Trigger: AATGAGCTCAAGGGGGTGGCTTCCACCACTGCTCCAGCGACCGTGGCGGGGGCTTCTGTGCCTATGCGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434848.5
ENST00000487585.5
CDS GCA 72 bp GGCGAGTACACGATTGGCCAGCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTGTGTAGCCTGGCGCGC +
Preference number: 6 (lower is better)
Translates to: GEYTIGQRVSGT*WYSWVVCSLAR
Trigger: GCGCGCCAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405025.5
ENST00000405478.5
ENST00000475818.5
ENST00000522202.5
CDS GCA 72 bp TCCCTAGGCGCCGAGTTCTTAAATGGTGACCCCAGGTaGCCGAGCCAAGCCATGTGTGTGGGCATCCGCCTG +
Preference number: 6 (lower is better)
Translates to: SLGAEFLNGDPR*PSQAMCVGIRL
Trigger: CAGGCGGATGCCCACACACATGGCTTGGCTCGGGCACCTGGGGTCACCATTTAAGAACTCGGCGCCTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS CCA 72 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGTAGCCTGGCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: EYTIGQRVSGTC*YSWVVCSLARP
Trigger: CGGGCGCGCCAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405025.5
ENST00000405478.5
ENST00000475818.5
ENST00000522202.5
CDS GCA 72 bp GGCGAGTACACGATTGGCCAGCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTGTGTAGCATCCCGGGG +
Preference number: 6 (lower is better)
Translates to: GEYTIGQRVSGT*WYSWVVCSIPG
Trigger: CCCCGGGATGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000402271.5
ENST00000404040.5
ENST00000404548.5
ENST00000425430.5
ENST00000446613.6
ENST00000458642.5
CDS GCA 72 bp CAAGGCCTCCGCGCATCACCTCTGCACCGTAATAAATaGCCCCACAGCTGTGTGGCACAAGGCTTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: QGLRASPLHRNK*PHSCVAQGFGC
Trigger: GCAGCCGAAGCCTTGTGCCACACAGCTGTGGGGGCATTTATTACGGTGCAGAGGTGATGCGCGGAGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS GCA 72 bp GGTGTGTCTGGCTGCAAGGCCTCCGCGCATCACCTCTaGACCGTAATAAATGCCCCCACAGCTGTGTGGCAC +
Preference number: 6 (lower is better)
Translates to: GVSGCKASAHHL*TVINAPTAVWH
Trigger: GTGCCACACAGCTGTGGGGGCATTTATTACGGTGCAGAGGTGATGCGCGGAGGCCTTGCAGCCAGACACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS GCA 72 bp GCTCAGAGAGCAGACCAGGTGTGCCCAAGGTCACAGTaGAGGTCTGTGGAGAAGCAGGCGTGCACTCAGGTG +
Preference number: 6 (lower is better)
Translates to: AQRADQVCPRSQ*RSVEKQACTQV
Trigger: CACCTGAGTGCACGCCTGCTTCTCCACAGACCTGCACTGTGACCTTGGGCACACCTGGTCTGCTCTCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS CCA 72 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGTAGCATCCCGGGGCCG +
Preference number: 6 (lower is better)
Translates to: EYTIGQRVSGTC*YSWVVCSIPGP
Trigger: CGGCCCCGGGATGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000402271.5
ENST00000404040.5
ENST00000404548.5
ENST00000425430.5
ENST00000446613.6
ENST00000458642.5
CDS CCA 72 bp CAGACCAGGTGTGCCCAAGGTCACAGTGCAGGTCTGTaGAGAAGCAGGCGTGCACTCAGGTGTGTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: QTRCAQGHSAGL*RSRRALRCVWL
Trigger: CAGCCAGACACACCTGAGTGCACGCCTGCTTCTCCACAGACCTGCACTGTGACCTTGGGCACACCTGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS GCA 72 bp GGCGAGTACACGATTGGCCAGCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTGTGTAGCCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: GEYTIGQRVSGT*WYSWVVCSLSQ
Trigger: CTGGCTCAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418189.5
ENST00000434848.5
CDS GCA 72 bp GGCGAGTACACGATTGGCCAGCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTGTGTAGCCAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: GEYTIGQRVSGT*WYSWVVCSQRL
Trigger: GAGCCTCTGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS GCA 72 bp GGCGAGTACACGATTGGCCAGCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTGTGTAGCCCGGTGGAA +
Preference number: 6 (lower is better)
Translates to: GEYTIGQRVSGT*WYSWVVCSPVE
Trigger: TTCCACCGGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS CCA 72 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGTAGCCTGAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: EYTIGQRVSGTC*YSWVVCSLSQG
Trigger: GCCCTGGCTCAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418189.5
ENST00000434848.5
CDS CCA 72 bp CGACCACCGTATGTCCTGTTCCTGCGCTTCCCAAGCTaGGTAGAAACGGCGAGAGGCTGGGGGTTAGAAACG +
Preference number: 6 (lower is better)
Translates to: RPPYVLFLRFPS*VETARGWGLET
Trigger: CGTTTCTAACCCCCAGCCTCTCGCCGTTTCTACCCAGCTTGGGAAGCGCAGGAACAGGACATACGGTGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS CCA 72 bp ATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTaGGTTGTGTGTAGCCCGGTGGAATCCCGCCTGGTT +
Preference number: 6 (lower is better)
Translates to: IGQRVSGTCWYS*VVCSPVESRLV
Trigger: AACCAGGCGGGATTCCACCGGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS CCA 72 bp ACACCCAAGATGAGGGTAGGGGCAGCAGCTTACGCTTaGCAAAGCGGTCCCCTGGGTAGATGTGGCGGTTGT +
Preference number: 6 (lower is better)
Translates to: TPKMRVGAAAYA*QSGPLGRCGGC
Trigger: ACAACCGCCACATCTACCCAGGGGACCGCTTTGCCAAGCGTAAGCTGCTGCCCCTACCCTCATCTTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487585.5
CDS CAA 72 bp GCCAGCGTGTCTCTGGCACATGCTGGTACAGCTGGGTaGTGTGTAGCCAGAGGCTCAGAGAGCAGACCAGGT +
Preference number: 6 (lower is better)
Translates to: ASVSLAHAGTAG*CVARGSESRPG
Trigger: ACCTGGTCTGCTCTCTGAGCCTCTGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS CAA 90 bp ACACGATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTGGGTaGTGTGTAGCCAGAGGCTCAGAGAGCAGACCAGGTGTGCCCAAG +
Preference number: 6 (lower is better)
Translates to: TRLASVSLAHAGTAG*CVARGSESRPGVPK
Trigger: CTTGGGCACACCTGGTCTGCTCTCTGAGCCTCTGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS TCA 72 bp GACACTTTACTCCCTAGGCGCCGAGTTCTTAAATGGTaGCCCCAGGTGCCCGAGCCAAGCCATGTGTGTGGG +
Preference number: 6 (lower is better)
Translates to: DTLLPRRRVLKW*PQVPEPSHVCG
Trigger: CCCACACACATGGCTTGGCTCGGGCACCTGGGGTCACCATTTAAGAACTCGGCGCCTAGGGAGTAAAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS GCA 72 bp GGCGAGTACACGATTGGCCAGCGTGTCTCTGGCACATaGTGGTACAGCTGGGTTGTGTGTAGCCTACCGTGT +
Preference number: 6 (lower is better)
Translates to: GEYTIGQRVSGT*WYSWVVCSLPC
Trigger: ACACGGTAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS CCA 72 bp ATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTaGGTTGTGTGTAGCCAGAGGCTCAGAGAGCAGACC +
Preference number: 6 (lower is better)
Translates to: IGQRVSGTCWYS*VVCSQRLREQT
Trigger: GGTCTGCTCTCTGAGCCTCTGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS CCA 72 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGTAGCCCGGTGGAATCC +
Preference number: 6 (lower is better)
Translates to: EYTIGQRVSGTC*YSWVVCSPVES
Trigger: GGATTCCACCGGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433119.5
CDS CCA 72 bp GGGCAGGGGGCAGTGCCCCAAATTATTCATAAGCAATaGGGACCCACAGCAGAGCTCTGCACACGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: GQGAVPQIIHKQ*GPTAELCTREQ
Trigger: CTGCTCTCGTGTGCAGAGCTCTGCTGTGGGTCCCCATTGCTTATGAATAATTTGGGGCACTGCCCCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS CAA 90 bp ACACGATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTGGGTaGTGTGTAGCCTACCGTGTGGAAAAAGACAGACGCACAGCTGGG +
Preference number: 6 (lower is better)
Translates to: TRLASVSLAHAGTAG*CVAYRVEKDRRTAG
Trigger: CCCAGCTGTGCGTCTGTCTTTTTCCACACGGTAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS TCA 72 bp TGCATTTGTAGCCCGAGAGACAGAAGACAGAAGCCGTaGGAGCCGTGGGGACATGAGGAGGGAGACTCTCCT +
Preference number: 6 (lower is better)
Translates to: CICSPRDRRQKP*EPWGHEEGDSP
Trigger: AGGAGAGTCTCCCTCCTCATGTCCCCACGGCTCTCACGGCTTCTGTCTTCTGTCTCTCGGGCTACAAATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS CCA 72 bp CATGAAGGTGATGTTGTAGCGCGGCGAGTACACGATTaGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTG +
Preference number: 6 (lower is better)
Translates to: HEGDVVARRVHD*PACLWHMLVQL
Trigger: CAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTCGCCGCGCTACAACATCACCTTCATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000295757.8
ENST00000402259.5
ENST00000402271.5
ENST00000404040.5
ENST00000404548.5
ENST00000405025.5
ENST00000405478.5
ENST00000416248.5
ENST00000418189.5
ENST00000425430.5
ENST00000433119.5
ENST00000434848.5
ENST00000437379.2
ENST00000446613.6
ENST00000455904.5
ENST00000458642.5
ENST00000475818.5
ENST00000522202.5
CDS CCA 72 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGTAGCCAGAGGCTCAGA +
Preference number: 6 (lower is better)
Translates to: EYTIGQRVSGTC*YSWVVCSQRLR
Trigger: TCTGAGCCTCTGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS CCA 72 bp GAGTACACGATTGGCCAGCGTGTCTCTGGCACATGCTaGTACAGCTGGGTTGTGTGTAGCCTACCGTGTGGA +
Preference number: 6 (lower is better)
Translates to: EYTIGQRVSGTC*YSWVVCSLPCG
Trigger: TCCACACGGTAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAATCGTGTACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS CAA 72 bp GCCAGCGTGTCTCTGGCACATGCTGGTACAGCTGGGTaGTGTGTAGCCTACCGTGTGGAAAAAGACAGACGC +
Preference number: 6 (lower is better)
Translates to: ASVSLAHAGTAG*CVAYRVEKDRR
Trigger: GCGTCTGTCTTTTTCCACACGGTAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS GCA 72 bp GGCCTCATTAGGGGTCCTGAGGAGGAGGTAACCCTCTaGTTTGACACTTTACTCCCTAGGCGCCGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: GLIRGPEEEVTL*FDTLLPRRRVL
Trigger: AAGAACTCGGCGCCTAGGGAGTAAAGTGTCAAAGCAGAGGGTTACCTCCTCCTCAGGACCCCTAATGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS GCA 72 bp CTGAGGCAACCCGTGAGAAATTGGTTCCCCGGGAAATaGCTTGAGGACAGTTTCCAGGTGCCCTTGGATGAA +
Preference number: 6 (lower is better)
Translates to: LRQPVRNWFPGK*LEDSFQVPLDE
Trigger: TTCATCCAAGGGCACCTGGAAACTGTCCTCAAGGCATTTCCCGGGGAACCAATTTCTCACGGGTTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498532.5
CDS CCA 72 bp ATTGGCCAGCGTGTCTCTGGCACATGCTGGTACAGCTaGGTTGTGTGTAGCCTACCGTGTGGAAAAAGACAG +
Preference number: 6 (lower is better)
Translates to: IGQRVSGTCWYS*VVCSLPCGKRQ
Trigger: CTGTCTTTTTCCACACGGTAGGCTACACACAACCCAGCTGTACCAGCATGTGCCAGAGACACGCTGGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455904.5
CDS GCA 72 bp AAATGCCCCCACAGCTGTGTGGCACAAGGCTTCGGCTaGAAAATGTGTGGCTGTTGTGAGGACTCAGAGAAT +
Preference number: 6 (lower is better)
Translates to: KCPHSCVAQGFG*KMCGCCEDSEN
Trigger: ATTCTCTGAGTCCTCACAACAGCCACACATTTTGCAGCCGAAGCCTTGTGCCACACAGCTGTGGGGGCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416248.5
CDS GCA 72 bp ATTATTCATAAGCAATGGGGACCCACAGCAGAGCTCTaGACACGAGAGCAGTCCCATCAGAGTGGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: IIHKQWGPTAEL*TREQSHQSGLQ
Trigger: CTGAAGCCCACTCTGATGGGACTGCTCTCGTGTGCAGAGCTCTGCTGTGGGTCCCCATTGCTTATGAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475818.5
CDS CCA 72 bp GAAAAGCAAACTGTAAAGGACTGTCCACATGTGACCTaGCTCAGGAGTTCGGGGTCGCAAGAACCCAAGGCA +
Preference number: 6 (lower is better)
Translates to: EKQTVKDCPHVT*LRSSGSQEPKA
Trigger: TGCCTTGGGTTCTTGCGACCCCGAACTCCTGAGCCAGGTCACATGTGGACAGTCCTTTACAGTTTGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475818.5