RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HCN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164588

Ensembl transcript IDs: ENST00000303230.6, ENST00000634658.1, ENST00000637305.1, ENST00000673735.1

Found 623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTaGCTGAGTCTGCGGCGGCTGGGACTGCTGTACCTGCTGCTGCGG +
Preference number: 1 (lower is better)
Translates to: RRGAARCLWLRGRLL*LSLRRLGLLYLLLR
Trigger: CCGCAGCAGCAGGTACAGCAGTCCCAGCCGCCGCAGACTCAGCCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR GCA 90 bp CTGTCGGAAGAGGGTGACGCGCTGCGGGACAGTGCTCCTGCCCCCTaGCTGAAGGCCCGTTCCGGGGACCGCCGTCACGGGTTGAGGGAT +
Preference number: 1 (lower is better)
Translates to: LSEEGDALRDSAPAP*LKARSGDRRHGLRD
Trigger: ATCCCTCAACCCGTGACGGCGGTCCCCGGAACGGGCCTTCAGGCAGGGGGCAGGAGCACTGTCCCGCAGCGCGTCACCCTCTTCCGACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 90 bp CTGCCTGAAGGCCCGTTCCGGGGACCGCCGTCACGGGTTGAGGGATaGAGGCCAGGGACTCGCCCACAGTGGGATGAGGTCTGGAAATCA +
Preference number: 1 (lower is better)
Translates to: LPEGPFRGPPSRVEG*RPGTRPQWDEVWKS
Trigger: TGATTTCCAGACCTCATCCCACTGTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACGGGCCTTCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 90 bp CCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACAGTaGGATGAGGTCTGGAAATCAGAGTGGACACCTCATGGGGCAGCG +
Preference number: 1 (lower is better)
Translates to: PPSRVEGWRPGTRPQ*DEVWKSEWTPHGAA
Trigger: CGCTGCCCCATGAGGTGTCCACTCTGATTTCCAGACCTCATCCCACTGTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 90 bp GTTGAGGGATGGAGGCCAGGGACTCGCCCACAGTGGGATGAGGTCTaGAAATCAGAGTGGACACCTCATGGGGCAGCGAGGGCTGCGAGG +
Preference number: 1 (lower is better)
Translates to: VEGWRPGTRPQWDEV*KSEWTPHGAARAAR
Trigger: CCTCGCAGCCCTCGCTGCCCCATGAGGTGTCCACTCTGATTTCCAGACCTCATCCCACTGTGGGCGAGTCCCTGGCCTCCATCCCTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR GCA 90 bp GAAGCGCCTGCGTGCTCTTGTGCACTTCATTTTTCGGCGTGGAGCTaGCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGCTGAGTCT +
Preference number: 1 (lower is better)
Translates to: EAPACSCALHFSAWS*QVSVAAGTAAVAES
Trigger: AGACTCAGCCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR GCA 90 bp CATAGTGGAAAGTTCGAGCGGCCAGAGGGCTCTGTACAGGAGGGCTaGAGACCGCGGTGGTGTAGGAGCAGGGTGACAGGATGGCTGATG +
Preference number: 1 (lower is better)
Translates to: HSGKFERPEGSVQEG*RPRWCRSRVTGWLM
Trigger: CATCAGCCATCCTGTCACCCTGCTCCTACACCACCGCGGTCTGCAGCCCTCCTGTACAGAGCCCTCTGGCCGCTCGAACTTTCCACTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 90 bp TGTTGTGAAGCGCCTGCGTGCTCTTGTGCACTTCATTTTTCGGCGTaGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: CCEAPACSCALHFSA*SCQVSVAAGTAAVA
Trigger: AGCCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCTTCACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR TCA 90 bp TGCGAGGCGGAGAGTGGCCTGACTTCCCGGGTCAGGTTGGTGTTGTaGAGCGCCTGCGTGCTCTTGTGCACTTCATTTTTCGGCGTGGAG +
Preference number: 1 (lower is better)
Translates to: CEAESGLTSRVRLVL*SACVLLCTSFFGVE
Trigger: CTCCACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCTTCACAACACCAACCTGACCCGGGAAGTCAGGCCACTCTCCGCCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 90 bp GGAGTGCAGGTTGCTGTGAGACAGGCTGGTCGCTGTGTACACCGGTaGAGATTGTGTCCTCATGCGGGAGGTCGGGGTCGTAGTAGACGA +
Preference number: 1 (lower is better)
Translates to: GVQVAVRQAGRCVHR*RLCPHAGGRGRSRR
Trigger: TCGTCTACTACGACCCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCTGTCTCACAGCAACCTGCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR GCA 90 bp TCCCACTTGATCTGGGTTCCTCTTCACCCTGTGAGACACTCCAGCTaGATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAAC +
Preference number: 1 (lower is better)
Translates to: SHLIWVPLHPVRHSS*IELPVFPISCALLN
Trigger: GTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCAGCTGGAGTGTCTCACAGGGTGAAGAGGAACCCAGATCAAGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 90 bp CTTGATCTGGGTTCCTCTTCACCCTGTGAGACACTCCAGCTGCATTaGACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCA +
Preference number: 1 (lower is better)
Translates to: LDLGSSSPCETLQLH*TASVPNQLCSVKHP
Trigger: TGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCAGCTGGAGTGTCTCACAGGGTGAAGAGGAACCCAGATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CCA 90 bp AAAGCCTTTCAGAAGGTTTTTGAAATCCCTATTTCCCACTTGATCTaGGTTCCTCTTCACCCTGTGAGACACTCCAGCTGCATTGAACTG +
Preference number: 1 (lower is better)
Translates to: KAFQKVFEIPISHLI*VPLHPVRHSSCIEL
Trigger: CAGTTCAATGCAGCTGGAGTGTCTCACAGGGTGAAGAGGAACCCAGATCAAGTGGGAAATAGGGATTTCAAAAACCTTCTGAAAGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 90 bp GTGTTCCAGTCATACTCCACATGTGTGGGATGCATTAGGCACAAATaGTTACTAAGGGAGTTCTTTGAGAAGAAGCAGGTGCTCACAGAT +
Preference number: 1 (lower is better)
Translates to: VFQSYSTCVGCIRHK*LLREFFEKKQVLTD
Trigger: ATCTGTGAGCACCTGCTTCTTCTCAAAGAACTCCCTTAGTAATCATTTGTGCCTAATGCATCCCACACATGTGGAGTATGACTGGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 90 bp TGGGTGATACTGACGCTGCAGTTCCATGCACCACACTTTCCACAGTaGGGCACGCAAGAACATTTAGAACTGCACATTTTAAACAGAATT +
Preference number: 1 (lower is better)
Translates to: WVILTLQFHAPHFPQ*GTQEHLELHILNRI
Trigger: AATTCTGTTTAAAATGTGCAGTTCTAAATGTTCTTGCGTGCCTCACTGTGGAAAGTGTGGTGCATGGAACTGCAGCGTCAGTATCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 90 bp TGCCAGAAGCCAAAGGACATTGGTGGTAAGGAGTATACTCTTATATaGCCACATGGCCTGCCATTTTATCTGATAGGATGCCATCTGTTC +
Preference number: 1 (lower is better)
Translates to: CQKPKDIGGKEYTLI*PHGLPFYLIGCHLF
Trigger: GAACAGATGGCATCCTATCAGATAAAATGGCAGGCCATGTGGTCATATAAGAGTATACTCCTTACCACCAATGTCCTTTGGCTTCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR TCA 90 bp AATGTTCTCTCGCTTTCCTTGTCTAGCCAAGATCCCATGCTATGTTaGCTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTT +
Preference number: 1 (lower is better)
Translates to: NVLSLSLSSQDPMLC*LVISRNVFTLGSSL
Trigger: AAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATAGCATGGGATCTTGGCTAGACAAGGAAAGCGAGAGAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CCA 90 bp TATAGAAGGCAGCAGCTTTCCTCAGGAATGATTCATTTAGAACAGTaGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAA +
Preference number: 1 (lower is better)
Translates to: YRRQQLSSGMIHLEQ*QLPDFTHYFPKFAE
Trigger: TTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTTCTAAATGAATCATTCCTGAGGAAAGCTGCTGCCTTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR GCA 90 bp TCCCTTCTCACAGGTTCTAGCTCTTATCTTCTTGTACCCCTTCCCTaGCGCAATATATTATCTTACGCAAAGCAAGTAAACTTTCAGTTT +
Preference number: 1 (lower is better)
Translates to: SLLTGSSSYLLVPLP*RNILSYAKQVNFQF
Trigger: AAACTGAAAGTTTACTTGCTTTGCGTAAGATAATATATTGCGGCAGGGAAGGGGTACAAGAAGATAAGAGCTAGAACCTGTGAGAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 90 bp ACCCACTGCCTAACAACAGATGCTCTATTCAGCAAAATATGGGCCTaGTTGGTCAGATTCACTCCATTTATTCACTATACTCTTTGTGTT +
Preference number: 1 (lower is better)
Translates to: THCLTTDALFSKIWA*LVRFTPFIHYTLCV
Trigger: AACACAAAGAGTATAGTGAATAAATGGAGTGAATCTGACCAATCAGGCCCATATTTTGCTGAATAGAGCATCTGTTGTTAGGCAGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR GCA 90 bp GTTTATTTAATGTTCTCTCGCTTTCCTTGTCTAGCCAAGATCCCATaGTATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAA +
Preference number: 1 (lower is better)
Translates to: VYLMFSRFPCLAKIP*YVDLSSPEMSSHLE
Trigger: TTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATAGCATGGGATCTTGGCTAGACAAGGAAAGCGAGAGAACATTAAATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 90 bp ATTATTGCATGTCATTTCCTGAAATCCTGTGAACCAAAATGTCACTaGCAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAA +
Preference number: 1 (lower is better)
Translates to: IIACHFLKSCEPKCH*QAHTKTLLPPHRNQ
Trigger: TTGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTTGGTTCACAGGATTTCAGGAAATGACATGCAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR CCA 90 bp CACAAGGAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTaGCTTGGATCACTGTCTTTAAACACAATAACAACAACGACAATG +
Preference number: 1 (lower is better)
Translates to: HKEFVTLVIGYEIAV*LGSLSLNTITTTTM
Trigger: CATTGTCGTTGTTGTTATTGTGTTTAAAGACAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTCCTTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR TCA 90 bp CTTTTAGGAAGATCACAAGGAATTTGTTACCCTTGTGATAGGTTATaGAATAGCAGTCTGGCTTGGATCACTGTCTTTAAACACAATAAC +
Preference number: 1 (lower is better)
Translates to: LLGRSQGICYPCDRL*NSSLAWITVFKHNN
Trigger: GTTATTGTGTTTAAAGACAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTCCTTGTGATCTTCCTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR TCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACGACGGCTGCTGTGGCTaGGTCTGCGGCGGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHDGCCG*VCGGWD
Trigger: GTCCCAGCCGCCGCAGACTCAGCCACAGCAGCCGTC...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CAA 90 bp CCTGCCCCCTGCCTGAAGGCCCGTTCCGGGGACCGCCGTCACGGGTaGAGGGATGGAGGCCAGGGACTCGCCCACAGTGGGATGAGGTCT +
Preference number: 2 (lower is better)
Translates to: PAPCLKARSGDRRHG*RDGGQGLAHSGMRS
Trigger: AGACCTCATCCCACTGTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACGGGCCTTCAGGCAGGGGGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCACCTGCTGCTGCGGCTaGTGTTGCATGAGTGACAGC +
Preference number: 2 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGTCCCG*CCMSDS
Trigger: GCTGTCACTCATGCAACAGCAGCCGCAGCAGCAGGT...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGATTGATGGGAGCGATTaGCTGCACCATCTCCCTGTC +
Preference number: 2 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWIDGSD*LHHLPV
Trigger: GACAGGGAGATGGTGCAGGCAATCGCTCCCATCAAT...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CAA 90 bp CAGGTTGCTGTGAGACAGGCTGGTCGCTGTGTACACCGGTGGAGATaGTGTCCTCATGCGGGAGGTCGGGGTCGTAGTAGACGATGTGGA +
Preference number: 2 (lower is better)
Translates to: QVAVRQAGRCVHRWR*CPHAGGRGRSRRCG
Trigger: TCCACATCGTCTACTACGACCCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCTGTCTCACAGCAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGAGTGCAGGTTGCTGTaGGACAGGCTGGTCGCTGTG +
Preference number: 2 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRECRLL*DRLVAV
Trigger: CACAGCGACCAGCCTGTCTCACAGCAACCTGCACTC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTCTTGGAAGAGCAGCTaGTGGTGGAGGGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRSWKSS*WWRGCW
Trigger: CCAGCACCCCCTCCACCAGCAGCTGCTCTTCCAAGA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR TCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGTCCCTGTCAAAGCCTaGATTGGAAGCAGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVVPVKA*IGSRVS
Trigger: GCTGACCCTGCTTCCAATTCAGGCTTTGACAGGGAC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCGCTGTGTACACCGGTaGAGATTGTGTCCTCATGCG +
Preference number: 2 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRRCVHR*RLCPHA
Trigger: CGCATGAGGACACAATCTCCACCGGTGTACACAGCG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGACGCTGCAGTTCCATaGACCACACTTTCCACAGTG +
Preference number: 2 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRDAAVP*TTLSTV
Trigger: CACTGTGGAAAGTGTGGTGCATGGAACTGCAGCGTC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGCGGCTGCTGTTGCATaGGTGACAGCTGGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: CIELPVFPISCALLNIHIAAAVA*VTAGRR
Trigger: CCGCCTCCCAGCTGTCACTCATGCAACAGCAGCCGC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR TCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTTCATTTGAGGATAATTaGTGGGAGCGATTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVSFEDN*WERLPA
Trigger: TGCAGGCAATCGCTCCCATCAATTATCCTCAAATGA...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCACTCCTGCCCCCTGCCTaGAGGCCCGTTCCGGGGACC +
Preference number: 2 (lower is better)
Translates to: FGIIGIISTKGITGSKDPLLPPA*RPVPGT
Trigger: GGTCCCCGGAACGGGCCTTCAGGCAGGGGGCAGGAG...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGCAGGGTTGTGCAAGTaGAGGGTTGTTAAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVAGLCK*RVVKKE
Trigger: TTCCTTTTTAACAACCCTGCACTTGCACAACCCTGC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTGCTGGTGGAGGGGGTaGTGGAGGGACTCCTCGGTT +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDCWWRG*WRDSSV
Trigger: AACCGAGGAGTCCCTCCAGCACCCCCTCCACCAGCA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGTCATGCTCTTAACTTaGGTTATTTACCGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVVMLLT*VIYRSQ
Trigger: CTGGCTGCGGTAAATAACCCAAGTTAAGAGCATGAC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTACCTTTGCCACTCTTTaGAGCGTGTGTGATATCTCC +
Preference number: 2 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRTFATL*SVCDIS
Trigger: GGAGATATCACACACGCTCCAAAGAGTGGCAAAGGT...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTCTTGTACCCCTTCCCTaGCGCAATATATTATCTTAC +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVLVPLP*RNILSY
Trigger: GTAAGATAATATATTGCGGCAGGGAAGGGGTACAAG...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTTTCAAGCGATCCTCCTaGCTTAACTTTCTGAGTAAC +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVFKRSS*LNFLSN
Trigger: GTTACTCAGAAAGTTAAGGCAGGAGGATCGCTTGAA...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTCTGTACAGGAGGGCTaGAGACCGCGGTGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDSVQEG*RPRWCR
Trigger: CCTACACCACCGCGGTCTGCAGCCCTCCTGTACAGA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTTTTTCGGCGTGGAGCTaGCAGGTGTCTGTGGCTGCG +
Preference number: 2 (lower is better)
Translates to: CIELPVFPISCALLNIHIFSAWS*QVSVAA
Trigger: CGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAA...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCACGGGGACGGCTGCTGTaGCTGAGTCTGCGGCGGCTG +
Preference number: 2 (lower is better)
Translates to: FGIIGIISTKGITGSKDPRGRLL*LSLRRL
Trigger: CAGCCGCCGCAGACTCAGCCACAGCAGCCGTCCCCG...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGCGGGACAGTGCTCCTaGCCCCTGCCTGAAGGCCCG +
Preference number: 2 (lower is better)
Translates to: FGACVISPIEIKELASLFAGQCS*PLPEGP
Trigger: CGGGCCTTCAGGCAGGGGGCAGGAGCACTGTCCCGC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTGCTGCCAGGTGTCTGTaGCTGCGGGGACGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFAARCL*LRGRLL
Trigger: CAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGC...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR TCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGTCCCACATAATGTGTaGTCTCTGTATGTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVVPHNV*SLYVLK
Trigger: TTTAAGAACATACAGAGATCACACATTATGTGGGAC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTGTTTGGGTTTTTCTTaGGAAAGGGTTTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRCLGFS*ERVLLC
Trigger: ACAGAGCAAAACCCTTTCTCAAGAAAAACCCAAACA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAGAAACTCCAGTTGGCTaGGCCCTCTCAGGTCCCACC +
Preference number: 2 (lower is better)
Translates to: KMSLTSTYKNTATASQKSETPVG*ALSGPT
Trigger: GGTGGGACCTGAGAGGGCTCAGCCAACTGGAGTTTC...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAAAGAGGGTGACGCGCTaGGGGACAGTGCTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKKRVTR*GTVLLP
Trigger: GGGCAGGAGCACTGTCCCGCAGCGCGTCACCCTCTT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTACCATCTCTTTAAAGTaGAACAGCATTCATCAGGGA +
Preference number: 2 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRTISLK*NSIHQG
Trigger: TCCCTGATGAATGCTGTTCCACTTTAAAGAGATGGT...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGTCTGGAAATCAGAGTaGACACCTCATGGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: CIELPVFPISCALLNIHIVWKSE*TPHGAA
Trigger: CGCTGCCCCATGAGGTGTCCACTCTGATTTCCAGAC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTATTGTATGGTTGCACTaGAAGACCATGCATTTCAAT +
Preference number: 2 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRIVWLH*KTMHFN
Trigger: ATTGAAATGCATGGTCTTTCAGTGCAACCATACAAT...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTTAAACCTGGGAGGCTaGTGTTGCAGTGGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDLNLGG*CCSGPR
Trigger: TCTTGGCCCACTGCAACATCAGCCTCCCAGGTTTAA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTTGCACTGAAAGACCATaGATTTCAATTTTGCTTATG +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVCTERP*ISILLM
Trigger: CATAAGCAAAATTGAAATGCATGGTCTTTCAGTGCA...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGGGTTTTCTAAACACTaGAGGTATGTAAGTATATAC +
Preference number: 2 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVGFSKH*RYVSIY
Trigger: GTATATACTTACATACCTGCAGTGTTTAGAAAACCC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGCCTGCGTGCTCTTGTaGACTTCATTTTTCGGCGTG +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDACVLL*TSFFGV
Trigger: CACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATGCTGTGAGACAGGCTaGTCGCTGTGTACACCGGTG +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIICCETG*SLCTPV
Trigger: CACCGGTGTACACAGCGACCAGCCTGTCTCACAGCA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGGCTGCAGACCGCGGTaGTGTAGGAGCAGGGTGACA +
Preference number: 2 (lower is better)
Translates to: FGACVISPIEIKELASLFGCRPR*CRSRVT
Trigger: TGTCACCCTGCTCCTACACCACCGCGGTCTGCAGCC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCTTCCCGGGTCAGGTTaGTGTTGTGAAGCGCCTGCG +
Preference number: 2 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFLPGSG*CCEAPA
Trigger: CGCAGGCGCTTCACAACACCAACCTGACCCGGGAAG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACCCACACTTTCCACAGTaGGGCACGCAAGAACATTTA +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDPHFPQ*GTQEHL
Trigger: TAAATGTTCTTGCGTGCCTCACTGTGGAAAGTGTGG...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGTCAGGTTGGTGTTGTaGAGCGCCTGCGTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKVRLVL*SACVLL
Trigger: CAAGAGCACGCAGGCGCTTCACAACACCAACCTGAC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAATTTTCAAGGTGGGATaGGGGGAGTGTCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIIFKVG*GECQQG
Trigger: GCCTTGCTGACACTCCCCGCATCCCACCTTGAAAAT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGACCAGGTCTTGACATaGTGCCCTGGTTGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: QESLFASTHLNILCRKRCDQVLT*CPGWSP
Trigger: TGGAGACCAACCAGGGCAGCATGTCAAGACCTGGTC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATATGGGAGCGATTGCCTaGACCATCTCCCTGTCATGT +
Preference number: 2 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDMGAIA*TISLSC
Trigger: ACATGACAGGGAGATGGTGCAGGCAATCGCTCCCAT...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAATCTGTGTGCTGGGACTaGGGGAGTGCAGGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKSVCWD*GSAGCC
Trigger: ACAGCAACCTGCACTCCCCCAGTCCCAGCACACAGA...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTTAAACCTGGGAGGCTaGTGTTGCAGTGGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: QESLFASTHLNILCRKRCLNLGG*CCSGPR
Trigger: TCTTGGCCCACTGCAACATCAGCCTCCCAGGTTTAA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAATCGCCCACAGTGGGATaGGGTCTGGAAATCAGAGTG +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKSPTVG*GLEIRV
Trigger: CACTCTGATTTCCAGACCTCATCCCACTGTGGGCGA...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTTGTGCTACAATTTGGTaGATGCAGCAACCACAGTTC +
Preference number: 2 (lower is better)
Translates to: CIELPVFPISCALLNIHICATIW*MQQPQF
Trigger: GAACTGTGGTTGCTGCATGCACCAAATTGTAGCACA...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGTCAGGTCCCACCCACTaGCTAACAACAGATGCTCTA +
Preference number: 2 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLSGPTH*LTTDAL
Trigger: TAGAGCATCTGTTGTTAGGCAGTGGGTGGGACCTGA...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCAGGCTGATGTTGCAGTaGGCCAAGATCCTGCCATTG +
Preference number: 2 (lower is better)
Translates to: QESLFASTHLNILCRKRCRLMLQ*AKILPL
Trigger: CAATGGCAGGATCTTGGCCCACTGCAACATCAGCCT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 90 bp GCCCTGTCCCACATAATGTGTGATCTCTGTATGTTCTTAAATGTATaGCCAGTGCCAGAGATACTGAAGACCTCCACTTTAAGTCATGCT +
Preference number: 2 (lower is better)
Translates to: ALSHIMCDLCMFLNV*PVPEILKTSTLSHA
Trigger: AGCATGACTTAAAGTGGAGGTCTTCAGTATCTCTGGCACTGGCAATACATTTAAGAACATACAGAGATCACACATTATGTGGGACAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGAAAGTCATTGCTTTTaGGGGGTAATAGCAGGTGTA +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDESHCF*GVIAGV
Trigger: TACACCTGCTATTACCCCTCAAAAGCAATGACTTTC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACACAGACATTTCAATGTaGATCCTCCCCGTTGATAAG +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDTDISM*ILPVDK
Trigger: CTTATCAACGGGGAGGATTCACATTGAAATGTCTGT...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTACCCACAACTCTAGCCTaGATGTGCTTGGTTACCAAA +
Preference number: 2 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLPTTLA*MCLVTK
Trigger: TTTGGTAACCAAGCACATTCAGGCTAGAGTTGTGGG...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTACAGTATTCCTGACATaGCATCATATGTCACCAGCA +
Preference number: 2 (lower is better)
Translates to: CIELPVFPISCALLNIHITVFLT*HHMSPA
Trigger: TGCTGGTGACATATGATGGCATGTCAGGAATACTGT...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCCAGGTCTTGACATGCTaGCCTGGTTGGTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: QESLFASTHLNILCRKRCQVLTC*PGWSPI
Trigger: AATTGGAGACCAACCAGGGCAGCATGTCAAGACCTG...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCACATACAAAAACACTaGTACCGCCTCACAGAAATC +
Preference number: 2 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSHIQKH*YRLTEI
Trigger: GATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACCATACTCCACATGTGTaGGATGCATTAGGCACAAAT +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDHTPHV*DALGTN
Trigger: ATTTGTGCCTAATGCATCCCACACATGTGGAGTATG...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAATTTCCCACTTGATCTaGGTTCCTCTTCACCCTGTG +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIISHLI*VPLHPV
Trigger: CACAGGGTGAAGAGGAACCCAGATCAAGTGGGAAAT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTACATGCTGCCCTGGTTaGTCTCCAATTCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: FGACVISPIEIKELASLFTCCPG*SPIPGL
Trigger: GAGGCCAGGAATTGGAGACCAACCAGGGCAGCATGT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAACCTTTGCCACTCTTTaGAGCGTGTGTGATATCTCC +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIITFATL*SVCDIS
Trigger: GGAGATATCACACACGCTCCAAAGAGTGGCAAAGGT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAAGGCTGATGTTGCAGTaGGCCAAGATCCTGCCATTG +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKRLMLQ*AKILPL
Trigger: CAATGGCAGGATCTTGGCCCACTGCAACATCAGCCT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 90 bp TTCTCTCGCTTTCCTTGTCTAGCCAAGATCCCATGCTATGTTGACTaGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAA +
Preference number: 2 (lower is better)
Translates to: FSRFPCLAKIPCYVD*SSPEMSSHLEVPLK
Trigger: TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATAGCATGGGATCTTGGCTAGACAAGGAAAGCGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTTACAACAGTATTCCTaGCATGCCATCATATGTCAC +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDLQQYS*HAIICH
Trigger: GTGACATATGATGGCATGTCAGGAATACTGTTGTAA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTTTACAACAGTATTCCTaGCATGCCATCATATGTCAC +
Preference number: 2 (lower is better)
Translates to: CIELPVFPISCALLNIHILQQYS*HAIICH
Trigger: GTGACATATGATGGCATGTCAGGAATACTGTTGTAA...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTTCCTCTTCACCCTGTaGGACACTCCAGCTGCATTG +
Preference number: 2 (lower is better)
Translates to: FGACVISPIEIKELASLFFLFTL*DTPAAL
Trigger: CAATGCAGCTGGAGTGTCTCACAGGGTGAAGAGGAA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAAGCAAAATATGGGCCTaGTTGGTCAGATTCACTCCA +
Preference number: 2 (lower is better)
Translates to: KMSLTSTYKNTATASQKSSKIWA*LVRFTP
Trigger: TGGAGTGAATCTGACCAATCAGGCCCATATTTTGCT...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAACAGGTCTTGACATGCTaGCCTGGTTGGTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKQVLTC*PGWSPI
Trigger: AATTGGAGACCAACCAGGGCAGCATGTCAAGACCTG...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAAAGAATGTTCACCTTTaGCACTCTTTGGAGCGTGTG +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIKNVHL*HSLERV
Trigger: CACACGCTCCAAAGAGTGGCAAAGGTGAACATTCTT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAATGAGCCACCACGCCTaGCCTGAGAACTTGCTTTAT +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKMSHHA*PENLLY
Trigger: ATAAAGCAAGTTCTCAGGCCAGGCGTGGTGGCTCAT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAATTGGTCTCCAATTCCTaGCCTCAAGCATTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKLVSNS*PQAFLP
Trigger: TGGGAGGAATGCTTGAGGCCAGGAATTGGAGACCAA...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 90 bp TTTTATCACTTCTTTCCCTTCTCACAGGTTCTAGCTCTTATCTTCTaGTACCCCTTCCCTGCCGCAATATATTATCTTACGCAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: FYHFFPFSQVLALIF*YPFPAAIYYLTQSK
Trigger: CTTGCTTTGCGTAAGATAATATATTGCGGCAGGGAAGGGGTACAAGAAGATAAGAGCTAGAACCTGTGAGAAGGGAAAGAAGTGATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAACTAAGGGAGTTCTTTaGGAAGAAGCAGGTGCTCAC +
Preference number: 2 (lower is better)
Translates to: FGIIGIISTKGITGSKDPTKGVL*EEAGAH
Trigger: GTGAGCACCTGCTTCTTCTCAAAGAACTCCCTTAGT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTCCCATGGTACAGTATaGGTACTTTTTAAAGTAGGT +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDSHGTV*VLFKVG
Trigger: ACCTACTTTAAAAAGTACTCATACTGTACCATGGGA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACCTTTCAGAAGGTTTTTaGAATCCCTATTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDLSEGF*NPYFPL
Trigger: AAGTGGGAAATAGGGATTTCAAAAACCTTCTGAAAG...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGATCCCATGCTATGTTaGCTTGTCATCTCCAGAAAT +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIDPMLC*LVISRN
Trigger: ATTTCTGGAGATGACAAGTCAACATAGCATGGGATC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATAGGATTTCGTTCTCCTaGTTGTTGAAAACACCAGTG +
Preference number: 2 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDRISFS*LLKTPV
Trigger: CACTGGTGTTTTCAACAATCAGGAGAACGAAATCCT...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGTTCAACTTTACCCCTaGTTTCTGTCACCATGTCTG +
Preference number: 2 (lower is better)
Translates to: QESLFASTHLNILCRKRCVQLYP*FLSPCL
Trigger: CAGACATGGTGACAGAAAGCAGGGGTAAAGTTGAAC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAACAGAGCTAATGATGTaGCAGATTAGCAATCAGACC +
Preference number: 2 (lower is better)
Translates to: KMSLTSTYKNTATASQKSTELMM*QISNQT
Trigger: GGTCTGATTGCTAATCTGGCACATCATTAGCTCTGT...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATGTGAAGCGCCTGCGTaGTCTTGTGCACTTCATTTT +
Preference number: 2 (lower is better)
Translates to: FGIIGIISTKGITGSKDPCEAPA*SCALHF
Trigger: AAAATGAAGTGCACAAGAGCACGCAGGCGCTTCACA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGTACTGATATGTAAATaGTCTTGCAGCTTTCCCATA +
Preference number: 2 (lower is better)
Translates to: CIELPVFPISCALLNIHIVLICK*SCSFPI
Trigger: TATGGGAAAGCTGCAAGACCATTTACATATCAGTAC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGTACTGATATGTAAATaGTCTTGCAGCTTTCCCATA +
Preference number: 2 (lower is better)
Translates to: GKAKDSALLVIILLGDTDVLICK*SCSFPI
Trigger: TATGGGAAAGCTGCAAGACCATTTACATATCAGTAC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCTCTTATATGACCACATaGCCTGCCATTTTATCTGAT +
Preference number: 2 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSSYMTT*PAILSD
Trigger: ATCAGATAAAATGGCAGGCCATGTGGTCATATAAGA...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGAGAACCAAAGACATGTaGGTGAACTCACATCTTCCT +
Preference number: 2 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLRTKDM*VNSHLP
Trigger: AGGAAGATGTGAGTTCACCCACATGTCTTTGGTTCT...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGCTAAACAGGTCTTTTaGCCCTCTCTTGGGAATTTA +
Preference number: 2 (lower is better)
Translates to: QESLFASTHLNILCRKRCAKQVF*PSLGNL
Trigger: TAAATTCCCAAGAGAGGGTCAAAAGACCTGTTTAGC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTGTTCAACTTTACCCCTaGTTTCTGTCACCATGTCTG +
Preference number: 2 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFVQLYP*FLSPCL
Trigger: CAGACATGGTGACAGAAAGCAGGGGTAAAGTTGAAC...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCCTACAATTTGGTGCATaGAGCAACCACAGTTCCTTA +
Preference number: 2 (lower is better)
Translates to: QESLFASTHLNILCRKRCLQFGA*SNHSSL
Trigger: TAAGGAACTGTGGTTGCTGCATGCACCAAATTGTAG...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCAAATATATCACTTATaGATGGAAAAGAGTCGTCGA +
Preference number: 2 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSQIYHL*MEKSRR
Trigger: TCGACGACTCTTTTCCATGCATAAGTGATATATTTG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR GCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTATTTTATCTGATAGGATaGCATCTGTTCATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLFYLIG*HLFILL
Trigger: CAGCAGGATGAACAGATGGCATCCTATCAGATAAAA...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR GCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATTCATGTTTCACAATCTaGTTGAGGATTTCGTTCTCC +
Preference number: 2 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDSCFTI*LRISFS
Trigger: GGAGAACGAAATCCTCAAGCAGATTGTGAAACATGA...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCTATATCACTTATGCATaGAAAAGAGTCGTCGAATAC +
Preference number: 2 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSYITYA*KRVVEY
Trigger: GTATTCGACGACTCTTTTCCATGCATAAGTGATATA...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGCTAAACAGGTCTTTTaGCCCTCTCTTGGGAATTTA +
Preference number: 2 (lower is better)
Translates to: FGIIGIISTKGITGSKDPAKQVF*PSLGNL
Trigger: TAAATTCCCAAGAGAGGGTCAAAAGACCTGTTTAGC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATGCATTAGGCACAAATaGTTACTAAGGGAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIICIRHK*LLREFF
Trigger: AAAGAACTCCCTTAGTAATCATTTGTGCCTAATGCA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAATTGTATGGTTGCACTaGAAGACCATGCATTTCAAT +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIIVWLH*KTMHFN
Trigger: ATTGAAATGCATGGTCTTTCAGTGCAACCATACAAT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCACTCTAACTCATCCCTaGTCATACAGTTGTTGTAAG +
Preference number: 2 (lower is better)
Translates to: QESLFASTHLNILCRKRCTLTHP*SYSCCK
Trigger: CTTACAACAACTGTATGATCAGGGATGAGTTAGAGT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCATTGAAGATAGGGATATaGACTCCTTTGCTTGATGAT +
Preference number: 2 (lower is better)
Translates to: KMSLTSTYKNTATASQKSLKIGI*TPLLDD
Trigger: ATCATCAAGCAAAGGAGTTCATATCCCTATCTTCAA...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR TCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGGAACCAAAATGTCACTaGCAAGCACATACAAAAACA +
Preference number: 2 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLEPKCH*QAHTKT
Trigger: TGTTTTTGTATGTGCTTGTCAGTGACATTTTGGTTC...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR TCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTGTTTCACAATCTGCTTaGGGATTTCGTTCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFVSQSA*GFRSPD
Trigger: ATCAGGAGAACGAAATCCTCAAGCAGATTGTGAAAC...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAACAGTATTCCTGACATaGCATCATATGTCACCAGCA +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKTVFLT*HHMSPA
Trigger: TGCTGGTGACATATGATGGCATGTCAGGAATACTGT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAACTTGTACCCCTTCCCTaGCGCAATATATTATCTTAC +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKLVPLP*RNILSY
Trigger: GTAAGATAATATATTGCGGCAGGGAAGGGGTACAAG...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTACTGCCTAACAACAGATaGTCTATTCAGCAAAATATG +
Preference number: 2 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLLPNNR*SIQQNM
Trigger: CATATTTTGCTGAATAGAGCATCTGTTGTTAGGCAG...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAAAATATGGGCCTGATTaGTCAGATTCACTCCATTTA +
Preference number: 2 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLKYGPD*SDSLHL
Trigger: TAAATGGAGTGAATCTGACCAATCAGGCCCATATTT...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGATTCTACAAGTCTTTTaGACTCTTACGCTTATGCAG +
Preference number: 2 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLILQVF*TLTLMQ
Trigger: CTGCATAAGCGTAAGAGTCCAAAAGACTTGTAGAAT...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGTGTTCAGATCCTTCTaGAACTTTTGCAGAAGAATT +
Preference number: 2 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIVFRSF*NFCRRI
Trigger: AATTCTTCTGCAAAAGTTCCAGAAGGATCTGAACAC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CAA 90 bp TCTTACAACAGTATTCCTGACATGCCATCATATGTCACCAGCATATaGATGATTACATTACATCGACTAGCAGTTAATTACTTCCACACC +
Preference number: 2 (lower is better)
Translates to: SYNSIPDMPSYVTSI*MITLHRLAVNYFHT
Trigger: GGTGTGGAAGTAATTAACTGCTAGTCGATGTAATGTAATCATCAATATGCTGGTGACATATGATGGCATGTCAGGAATACTGTTGTAAGA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 90 bp TTCACTTATGAAGAGGTCATCCAGACCTGGAGACAAGCTACTTTTTaGGTGAATAGAATATATTGCCATTGCTACTATTTATCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: FTYEEVIQTWRQATF*VNRIYCHCYYLSSL
Trigger: CAAGGAGGATAAATAGTAGCAATGGCAATATATTCTATTCACCAAAAAAGTAGCTTGTCTCCAGGTCTGGATGACCTCTTCATAAGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTCTACAATTTGGTGCATaGAGCAACCACAGTTCCTTA +
Preference number: 2 (lower is better)
Translates to: FGACVISPIEIKELASLFLQFGA*SNHSSL
Trigger: TAAGGAACTGTGGTTGCTGCATGCACCAAATTGTAG...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR GCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTTCAAGCGATCCTCCTaGCTTAACTTTCTGAGTAAC +
Preference number: 2 (lower is better)
Translates to: FGACVISPIEIKELASLFFKRSS*LNFLSN
Trigger: GTTACTCAGAAAGTTAAGGCAGGAGGATCGCTTGAA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAAGAGATTTCCAGTTTTaGAACCATTCAAGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLRDFQF*NHSSFL
Trigger: CAAGAAACTTGAATGGTTCCAAAACTGGAAATCTCT...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGAATTACCAGCTACAGTaGAGACACAGACAACACTTA +
Preference number: 2 (lower is better)
Translates to: NRALGLLYKPILFKAINMNYQLQ*RHRQHL
Trigger: TAAGTGTTGTCTGTGTCTTCACTGTAGCTGGTAATT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGTTCCCAAACAGACGTaGTGCTGTATTGAATTTATT +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKVPKQT*CCIEFI
Trigger: AATAAATTCAATACAGCATCACGTCTGTTTGGGAAC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGTCCCACATAATGTGTaGTCTCTGTATGTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: FGIIGIISTKGITGSKDPVPHNV*SLYVLK
Trigger: TTTAAGAACATACAGAGATCACACATTATGTGGGAC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR TCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTACTCTAACTCATCCCTaGTCATACAGTTGTTGTAAG +
Preference number: 2 (lower is better)
Translates to: FGACVISPIEIKELASLFTLTHP*SYSCCK
Trigger: CTTACAACAACTGTATGATCAGGGATGAGTTAGAGT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 90 bp TTATGGTTCATTTATTACCAAGGTCATTTATTTATAAGAAACATGTaGCCAACCCACAACTCTAGCCTGAATGTGCTTGGTTACCAAATG +
Preference number: 2 (lower is better)
Translates to: LWFIYYQGHLFIRNM*PTHNSSLNVLGYQM
Trigger: CATTTGGTAACCAAGCACATTCAGGCTAGAGTTGTGGGTTGGCAACATGTTTCTTATAAATAAATGACCTTGGTAATAAATGAACCATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTATTTCTTTCTGCTTTaGCAATCAGCAGGGATCATA +
Preference number: 2 (lower is better)
Translates to: NRALGLLYKPILFKAINMYFFLL*QSAGII
Trigger: TATGATCCCTGCTGATTGTCAAAGCAGAAAGAAATA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR GCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGATATGTAAATGGTCTTaGAGCTTTCCCATAGGTTCT +
Preference number: 2 (lower is better)
Translates to: NRALGLLYKPILFKAINMICKWS*SFPIGS
Trigger: AGAACCTATGGGAAAGCTGCAAGACCATTTACATAT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAACATGTTTCTTTCCCATaGTACAGTATGAGTACTTTT +
Preference number: 2 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKHVSFP*YSMSTF
Trigger: AAAAGTACTCATACTGTACCATGGGAAAGAAACATG...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTCATGTTTCTTTCCCATaGTACAGTATGAGTACTTTT +
Preference number: 2 (lower is better)
Translates to: FGACVISPIEIKELASLFHVSFP*YSMSTF
Trigger: AAAAGTACTCATACTGTACCATGGGAAAGAAACATG...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR GCA 72 bp GAGGGTGACGCGCTGCGGGACAGTGCTCCTGCCCCCTaGCTGAAGGCCCGTTCCGGGGACCGCCGTCACGGG +
Preference number: 3 (lower is better)
Translates to: EGDALRDSAPAP*LKARSGDRRHG
Trigger: CCCGTGACGGCGGTCCCCGGAACGGGCCTTCAGGCAGGGGGCAGGAGCACTGTCCCGCAGCGCGTCACCCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 72 bp GGCCCGTTCCGGGGACCGCCGTCACGGGTTGAGGGATaGAGGCCAGGGACTCGCCCACAGTGGGATGAGGTC +
Preference number: 3 (lower is better)
Translates to: GPFRGPPSRVEG*RPGTRPQWDEV
Trigger: GACCTCATCCCACTGTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR TCA 72 bp GGGGGATGGCTCCCGACGACATCTGTCGGAAGAGGGTaGCGCGCTGCGGGACAGTGCTCCTGCCCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: GGWLPTTSVGRG*RAAGQCSCPLP
Trigger: AGGCAGGGGGCAGGAGCACTGTCCCGCAGCGCGTCACCCTCTTCCGACAGATGTCGTCGGGAGCCATCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR GCA 72 bp AAGTTCGAGCGGCCAGAGGGCTCTGTACAGGAGGGCTaGAGACCGCGGTGGTGTAGGAGCAGGGTGACAGGA +
Preference number: 3 (lower is better)
Translates to: KFERPEGSVQEG*RPRWCRSRVTG
Trigger: TCCTGTCACCCTGCTCCTACACCACCGCGGTCTGCAGCCCTCCTGTACAGAGCCCTCTGGCCGCTCGAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 72 bp CCAGAGGGCTCTGTACAGGAGGGCTGCAGACCGCGGTaGTGTAGGAGCAGGGTGACAGGATGGCTGATGGCT +
Preference number: 3 (lower is better)
Translates to: PEGSVQEGCRPR*CRSRVTGWLMA
Trigger: AGCCATCAGCCATCCTGTCACCCTGCTCCTACACCACCGCGGTCTGCAGCCCTCCTGTACAGAGCCCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 72 bp CACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTaGCTGCGGGGACGGCTGCTGTGGCTGAGTCTGCGG +
Preference number: 3 (lower is better)
Translates to: HFIFRRGAARCL*LRGRLLWLSLR
Trigger: CCGCAGACTCAGCCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 72 bp GCGCCTGCGTGCTCTTGTGCACTTCATTTTTCGGCGTaGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCT +
Preference number: 3 (lower is better)
Translates to: APACSCALHFSA*SCQVSVAAGTA
Trigger: AGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR GCA 72 bp GCGTGCTCTTGTGCACTTCATTTTTCGGCGTGGAGCTaGCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: ACSCALHFSAWS*QVSVAAGTAAV
Trigger: CACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCACAAGAGCACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 72 bp TGGAGGCCAGGGACTCGCCCACAGTGGGATGAGGTCTaGAAATCAGAGTGGACACCTCATGGGGCAGCGAGG +
Preference number: 3 (lower is better)
Translates to: WRPGTRPQWDEV*KSEWTPHGAAR
Trigger: CCTCGCTGCCCCATGAGGTGTCCACTCTGATTTCCAGACCTCATCCCACTGTGGGCGAGTCCCTGGCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 72 bp GTTGCTGTGAGACAGGCTGGTCGCTGTGTACACCGGTaGAGATTGTGTCCTCATGCGGGAGGTCGGGGTCGT +
Preference number: 3 (lower is better)
Translates to: VAVRQAGRCVHR*RLCPHAGGRGR
Trigger: ACGACCCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCTGTCTCACAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CCA 72 bp TGGGACTGGGGGAGTGCAGGTTGCTGTGAGACAGGCTaGTCGCTGTGTACACCGGTGGAGATTGTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: WDWGSAGCCETG*SLCTPVEIVSS
Trigger: TGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCTGTCTCACAGCAACCTGCACTCCCCCAGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CAA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGCCAAGATCCTGCCATaGCACTCCCACCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRAKILP*HSHLGD
Trigger: GTCACCCAGGTGGGAGTGCAATGGCAGGATCTTGGC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR GCA 72 bp CTTCCCGGGTCAGGTTGGTGTTGTGAAGCGCCTGCGTaGTCTTGTGCACTTCATTTTTCGGCGTGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: LPGSGWCCEAPA*SCALHFSAWSC
Trigger: GCAGCTCCACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCTTCACAACACCAACCTGACCCGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTCTAGCTCTTATCTTCTaGTACCCCTTCCCTGCCGCA +
Preference number: 3 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVLALIF*YPFPAA
Trigger: TGCGGCAGGGAAGGGGTACAAGAAGATAAGAGCTAG...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR GCA 72 bp ATCTGGGTTCCTCTTCACCCTGTGAGACACTCCAGCTaGATTGAACTGCCAGTGTTCCCAATCAGCTGTGCT +
Preference number: 3 (lower is better)
Translates to: IWVPLHPVRHSS*IELPVFPISCA
Trigger: AGCACAGCTGATTGGGAACACTGGCAGTTCAATGCAGCTGGAGTGTCTCACAGGGTGAAGAGGAACCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTAGTCATGCTCTTAACTaGGGTTATTTACCGCAGCCA +
Preference number: 3 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVSHALN*GYLPQP
Trigger: TGGCTGCGGTAAATAACCCAAGTTAAGAGCATGACT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCTGTCAAAGCCTGAATaGGAAGCAGGGTCAGCATTA +
Preference number: 3 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRLSKPE*EAGSAL
Trigger: TAATGCTGACCCTGCTTCCAATTCAGGCTTTGACAG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTATTCAGGGTTGTCATTaGAGGATAATTGATGGGAGC +
Preference number: 3 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVIQGCH*RIIDGS
Trigger: GCTCCCATCAATTATCCTCAAATGACAACCCTGAAT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CAA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGTACACCGGTGGAGATaGTGTCCTCATGCGGGAGGT +
Preference number: 3 (lower is better)
Translates to: CIELPVFPISCALLNIHIVHRWR*CPHAGG
Trigger: ACCTCCCGCATGAGGACACAATCTCCACCGGTGTAC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTCAGTTCCTTAAATTTTaGGCCATTGTTTTCAGGACT +
Preference number: 3 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVQFLKF*AIVFRT
Trigger: AGTCCTGAAAACAATGGCCAAAAATTTAAGGAACTG...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACAGCGCCTGCGTGCTCTaGTGCACTTCATTTTTCGGC +
Preference number: 3 (lower is better)
Translates to: GKAKDSALLVIILLGDTDSACVL*CTSFFG
Trigger: GCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCT...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR GCA 72 bp ATTATACTTCTGGGTGATACTGACGCTGCAGTTCCATaGACCACACTTTCCACAGTGAGGCACGCAAGAACA +
Preference number: 3 (lower is better)
Translates to: IILLGDTDAAVP*TTLSTVRHART
Trigger: TGTTCTTGCGTGCCTCACTGTGGAAAGTGTGGTGCATGGAACTGCAGCGTCAGTATCACCCAGAAGTATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CCA 72 bp CAGAAGGTTTTTGAAATCCCTATTTCCCACTTGATCTaGGTTCCTCTTCACCCTGTGAGACACTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: QKVFEIPISHLI*VPLHPVRHSSC
Trigger: GCAGCTGGAGTGTCTCACAGGGTGAAGAGGAACCCAGATCAAGTGGGAAATAGGGATTTCAAAAACCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCAGTTCCTTAAATTTTaGGCCATTGTTTTCAGGACT +
Preference number: 3 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRQFLKF*AIVFRT
Trigger: AGTCCTGAAAACAATGGCCAAAAATTTAAGGAACTG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGACACTCCAGCTGCATaGAACTGCCAGTGTTCCCAA +
Preference number: 3 (lower is better)
Translates to: GKAKDSALLVIILLGDTDDTPAA*NCQCSQ
Trigger: TTGGGAACACTGGCAGTTCAATGCAGCTGGAGTGTC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGACATGCTGCCCTGGTaGGTCTCCAATTCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIDMLPW*VSNSWP
Trigger: AGGCCAGGAATTGGAGACCAACCAGGGCAGCATGTC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGCTGATGCAGGAGAATaGCTTAAACCTGGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GKAKDSALLVIILLGDTDADAGE*LKPGRL
Trigger: CAGCCTCCCAGGTTTAAGCAATTCTCCTGCATCAGC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCTTTGGAAACTCCAGTaGGCTGAGCCCTCTCAGGTC +
Preference number: 3 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLLWKLQ*AEPSQV
Trigger: GACCTGAGAGGGCTCAGCCAACTGGAGTTTCCAAAG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR TCA 72 bp CTGACGCTGCAGTTCCATGCACCACACTTTCCACAGTaGGGCACGCAAGAACATTTAGAACTGCACATTTTA +
Preference number: 3 (lower is better)
Translates to: LTLQFHAPHFPQ*GTQEHLELHIL
Trigger: TAAAATGTGCAGTTCTAAATGTTCTTGCGTGCCTCACTGTGGAAAGTGTGGTGCATGGAACTGCAGCGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 72 bp ACGATGTGGAATTCAGGGTTGTCATTTGAGGATAATTaGTGGGAGCGATTGCCTGCACCATCTCCCTGTCAT +
Preference number: 3 (lower is better)
Translates to: TMWNSGLSFEDN*WERLPAPSPCH
Trigger: ATGACAGGGAGATGGTGCAGGCAATCGCTCCCATCAATTATCCTCAAATGACAACCCTGAATTCCACATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR GCA 72 bp CAGGGTTGTCATTTGAGGATAATTGATGGGAGCGATTaGCTGCACCATCTCCCTGTCATGTTTCACAATCTG +
Preference number: 3 (lower is better)
Translates to: QGCHLRIIDGSD*LHHLPVMFHNL
Trigger: CAGATTGTGAAACATGACAGGGAGATGGTGCAGGCAATCGCTCCCATCAATTATCCTCAAATGACAACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACAAAGAATGTTCACCTTaGCCACTCTTTGGAGCGTGT +
Preference number: 3 (lower is better)
Translates to: GKAKDSALLVIILLGDTDKECSP*PLFGAC
Trigger: ACACGCTCCAAAGAGTGGCAAAGGTGAACATTCTTT...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 72 bp TCGCTTTCCTTGTCTAGCCAAGATCCCATGCTATGTTaGCTTGTCATCTCCAGAAATGTCTTCACACTTGGA +
Preference number: 3 (lower is better)
Translates to: SLSLSSQDPMLC*LVISRNVFTLG
Trigger: TCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATAGCATGGGATCTTGGCTAGACAAGGAAAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTAGAAAGTCATTGCTTTaGAGGGGTAATAGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: CIELPVFPISCALLNIHIRKSLL*RGNSRC
Trigger: ACACCTGCTATTACCCCTCAAAAGCAATGACTTTCT...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 72 bp TCATACTCCACATGTGTGGGATGCATTAGGCACAAATaGTTACTAAGGGAGTTCTTTGAGAAGAAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SYSTCVGCIRHK*LLREFFEKKQV
Trigger: CACCTGCTTCTTCTCAAAGAACTCCCTTAGTAATCATTTGTGCCTAATGCATCCCACACATGTGGAGTATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 72 bp AAGTGGAACAGCATTCATCAGGGAATTGTTCACTTATaGAGAGGTCATCCAGACCTGGAGACAAGCTACTTT +
Preference number: 3 (lower is better)
Translates to: KWNSIHQGIVHL*RGHPDLETSYF
Trigger: AAAGTAGCTTGTCTCCAGGTCTGGATGACCTCTTCATAAGTGAACAATTCCCTGATGAATGCTGTTCCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 72 bp CCAAAGGACATTGGTGGTAAGGAGTATACTCTTATATaGCCACATGGCCTGCCATTTTATCTGATAGGATGC +
Preference number: 3 (lower is better)
Translates to: PKDIGGKEYTLI*PHGLPFYLIGC
Trigger: GCATCCTATCAGATAAAATGGCAGGCCATGTGGTCATATAAGAGTATACTCCTTACCACCAATGTCCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR GCA 72 bp ATGTTCTCTCGCTTTCCTTGTCTAGCCAAGATCCCATaGTATGTTGACTTGTCATCTCCAGAAATGTCTTCA +
Preference number: 3 (lower is better)
Translates to: MFSRFPCLAKIP*YVDLSSPEMSS
Trigger: TGAAGACATTTCTGGAGATGACAAGTCAACATAGCATGGGATCTTGGCTAGACAAGGAAAGCGAGAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATGTATGTGCTACAATTaGGTGCATGCAGCAACCACA +
Preference number: 3 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIICMCYN*VHAATT
Trigger: TGTGGTTGCTGCATGCACCAAATTGTAGCACATACA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTGCTTAAGAAAGTCATaGCTTTTGAGGGGTAATAGC +
Preference number: 3 (lower is better)
Translates to: GKAKDSALLVIILLGDTDCLRKS*LLRGNS
Trigger: GCTATTACCCCTCAAAAGCAATGACTTTCTTAAGCA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGACACTCCAGCTGCATaGAACTGCCAGTGTTCCCAA +
Preference number: 3 (lower is better)
Translates to: FGACVISPIEIKELASLFDTPAA*NCQCSQ
Trigger: TTGGGAACACTGGCAGTTCAATGCAGCTGGAGTGTC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTATTCAACTCTGTTGTATaGCATGGCCCACAGTCTTAC +
Preference number: 3 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLFNSVV*HGPQSY
Trigger: GTAAGACTGTGGGCCATGCAATACAACAGAGTTGAA...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR TCA 72 bp CTTTGCCCTGATGTTAAAAGCCTTTCAGAAGGTTTTTaGAATCCCTATTTCCCACTTGATCTGGGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: LCPDVKSLSEGF*NPYFPLDLGSS
Trigger: AGAGGAACCCAGATCAAGTGGGAAATAGGGATTTCAAAAACCTTCTGAAAGGCTTTTAACATCAGGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR GCA 72 bp AGACAGACAATGCTCATAGACGTTCAACTTTACCCCTaGTTTCTGTCACCATGTCTGTACTATTTTCAACAC +
Preference number: 3 (lower is better)
Translates to: RQTMLIDVQLYP*FLSPCLYYFQH
Trigger: GTGTTGAAAATAGTACAGACATGGTGACAGAAAGCAGGGGTAAAGTTGAACGTCTATGAGCATTGTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR GCA 72 bp ACAGGTTCTAGCTCTTATCTTCTTGTACCCCTTCCCTaGCGCAATATATTATCTTACGCAAAGCAAGTAAAC +
Preference number: 3 (lower is better)
Translates to: TGSSSYLLVPLP*RNILSYAKQVN
Trigger: GTTTACTTGCTTTGCGTAAGATAATATATTGCGGCAGGGAAGGGGTACAAGAAGATAAGAGCTAGAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATCATTTAAAACCCACTaGTGTGGGGAGGTTCTATCA +
Preference number: 3 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIISFKTH*CGEVLS
Trigger: TGATAGAACCTCCCCACACAAGTGGGTTTTAAATGA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGTCTGTTTCTTCCCTGTaGAACAGCATTACTAATGGG +
Preference number: 3 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLSVSSL*NSITNG
Trigger: CCCATTAGTAATGCTGTTCAACAGGGAAGAAACAGA...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CAA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGCCTGGCCTGAGAACTaGCTTTATTTTAGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: QESLFASTHLNILCRKRCAWPEN*LYFSQN
Trigger: ATTTTGGCTAAAATAAAGCAAGTTCTCAGGCCAGGC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCACATTCTACAAGTCTTTaGGACTCTTACGCTTATGCA +
Preference number: 3 (lower is better)
Translates to: KMSLTSTYKNTATASQKSHSTSL*DSYAYA
Trigger: TGCATAAGCGTAAGAGTCCAAAAGACTTGTAGAATG...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CAA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAAGAACCTATATAGTTTaGCAGTTAAGAGCACTGGCT +
Preference number: 3 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLRTYIV*QLRALA
Trigger: AGCCAGTGCTCTTAACTGCAAAACTATATAGGTTCT...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR CCA 72 bp CAGCTTGATACTAAAACACCCAGAACCAAAGACATGTaGGTGAACTCACATCTTCCTCTGAATTTTTATTGC +
Preference number: 3 (lower is better)
Translates to: QLDTKTPRTKDM*VNSHLPLNFYC
Trigger: GCAATAAAAATTCAGAGGAAGATGTGAGTTCACCCACATGTCTTTGGTTCTGGGTGTTTTAGTATCAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATTAGGAATCTTTCAATaGTGTTCCAGTCATACTCCA +
Preference number: 3 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIILGIFQ*CSSHTP
Trigger: TGGAGTATGACTGGAACACAATTGAAAGATTCCTAA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCATTTACCGCAGCCAGTaGTTAGGAATCTTTCAATTG +
Preference number: 3 (lower is better)
Translates to: QESLFASTHLNILCRKRCIYRSQ*LGIFQL
Trigger: CAATTGAAAGATTCCTAACAACTGGCTGCGGTAAAT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTGCTTAAGAAAGTCATaGCTTTTGAGGGGTAATAGC +
Preference number: 3 (lower is better)
Translates to: QESLFASTHLNILCRKRCCLRKS*LLRGNS
Trigger: GCTATTACCCCTCAAAAGCAATGACTTTCTTAAGCA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCATTACACATTGCACAGTaGTTCATTGTAAAACAGCCA +
Preference number: 3 (lower is better)
Translates to: KMSLTSTYKNTATASQKSLHIAQ*FIVKQP
Trigger: TGGCTGTTTTACAATGAACAACTGTGCAATGTGTAA...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CAA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGTCCTCTGAATTTTTATaGCAAAAGCTCACAGAGCTA +
Preference number: 3 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLSSEFL*QKLTEL
Trigger: TAGCTCTGTGAGCTTTTGCAATAAAAATTCAGAGGA...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CAA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTTAGGAATCTTTCAATaGTGTTCCAGTCATACTCCA +
Preference number: 3 (lower is better)
Translates to: QESLFASTHLNILCRKRCLGIFQ*CSSHTP
Trigger: TGGAGTATGACTGGAACACAATTGAAAGATTCCTAA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAATTTACCGCAGCCAGTaGTTAGGAATCTTTCAATTG +
Preference number: 3 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKIYRSQ*LGIFQL
Trigger: CAATTGAAAGATTCCTAACAACTGGCTGCGGTAAAT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTACTATTTATCCTCCTaGTTTTCAGGAATGCTTCAC +
Preference number: 3 (lower is better)
Translates to: QESLFASTHLNILCRKRCYYLSS*FSGMLH
Trigger: GTGAAGCATTCCTGAAAACAAGGAGGATAAATAGTA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR TCA 72 bp CTAACAACAGATGCTCTATTCAGCAAAATATGGGCCTaGTTGGTCAGATTCACTCCATTTATTCACTATACT +
Preference number: 3 (lower is better)
Translates to: LTTDALFSKIWA*LVRFTPFIHYT
Trigger: AGTATAGTGAATAAATGGAGTGAATCTGACCAATCAGGCCCATATTTTGCTGAATAGAGCATCTGTTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR TCA 72 bp AGATCACAAGGAATTTGTTACCCTTGTGATAGGTTATaGAATAGCAGTCTGGCTTGGATCACTGTCTTTAAA +
Preference number: 3 (lower is better)
Translates to: RSQGICYPCDRL*NSSLAWITVFK
Trigger: TTTAAAGACAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTCCTTGTGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTATGTTCTTAAATGTATaGCCAGTGCCAGAGATACTG +
Preference number: 3 (lower is better)
Translates to: FGACVISPIEIKELASLFMFLNV*PVPEIL
Trigger: CAGTATCTCTGGCACTGGCAATACATTTAAGAACAT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGTATTTCTTTCTGCTTaGACAATCAGCAGGGATCAT +
Preference number: 3 (lower is better)
Translates to: FGACVISPIEIKELASLFVFLSA*TISRDH
Trigger: ATGATCCCTGCTGATTGTCAAAGCAGAAAGAAATAC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR TCA 72 bp AGTTTGGAATCCCAGCTCCACTTCTTACTAGTTCTATaGATCTGGACGAGTTACCTTATTGTATTTAATTGT +
Preference number: 3 (lower is better)
Translates to: SLESQLHFLLVL*IWTSYLIVFNC
Trigger: ACAATTAAATACAATAAGGTAACTCGTCCAGATTCATAGAACTAGTAAGAAGTGGAGCTGGGATTCCAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR CCA 72 bp TTCATTAGTGTCGATTTAGGCATTCTACAAGTCTTTTaGACTCTTACGCTTATGCAGACTATAAAATTCAGG +
Preference number: 3 (lower is better)
Translates to: FISVDLGILQVF*TLTLMQTIKFR
Trigger: CCTGAATTTTATAGTCTGCATAAGCGTAAGAGTCCAAAAGACTTGTAGAATGCCTAAATCGACACTAATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACTCTGTCGGAAGAGGGTaGCGCGCTGCGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHSVGRG*RAAGQC
Trigger: GCACTGTCCCGCAGCGCGTCACCCTCTTCCGACAGA...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCCTCCTGCCCCCTGCCTaGAGGCCCGTTCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGLLPPA*RPVPGT
Trigger: GGTCCCCGGAACGGGCCTTCAGGCAGGGGGCAGGAG...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACAGAGGTCAGACATGCTaGCTGGGGCTTGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHRGQTC*LGLGLH
Trigger: ATGGAGCCCAAGCCCCAGTCAGCATGTCTGACCTCT...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGCCGTCGCGGACGCCTTaGCGGGGAAGACGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWPSRTP*RGRRCC
Trigger: GCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGG...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGGCGGCTGCTGTTGCATaGGTGACAGCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWAAAVA*VTAGRR
Trigger: CCGCCTCCCAGCTGTCACTCATGCAACAGCAGCCGC...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACATTGATGGGAGCGATTaGCTGCACCATCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHIDGSD*LHHLPV
Trigger: GACAGGGAGATGGTGCAGGCAATCGCTCCCATCAAT...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGTCACGGGTTGAGGGATaGAGGCCAGGGACTCGCCCA +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWSRVEG*RPGTRP
Trigger: TGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGA...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGGTGGAGGGGGTGCTaGAGGGACTCCTCGGTTCGG +
Preference number: 4 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGWWRGC*RDSSVR
Trigger: CCGAACCGAGGAGTCCCTCCAGCACCCCCTCCACCA...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTTGCATGAAGCCGTACTaGCGCCGGGGCCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVCMKPY*RRGPSA
Trigger: CGCCGAGGGGCCCCGGCGGCAGTACGGCTTCATGCA...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGTCTGTACAGGAGGGCTaGAGACCGCGGTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWSVQEG*RPRWCR
Trigger: CCTACACCACCGCGGTCTGCAGCCCTCCTGTACAGA...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGTCTTGGAAGAGCAGCTaGTGGTGGAGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWSWKSS*WWRGCW
Trigger: CCAGCACCCCCTCCACCAGCAGCTGCTCTTCCAAGA...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTCGGGGACGGCTGCTGTaGCTGAGTCTGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVRGRLL*LSLRRL
Trigger: CAGCCGCCGCAGACTCAGCCACAGCAGCCGTCCCCG...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGCTGCCCTTAGTGGCTaGGGTCCGGGCTCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRAALSG*GPGSGA
Trigger: CGCACCGGAGCCCGGACCGCAGCCACTAAGGGCAGC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACTGTGAAGCGCCTGCGTaGTCTTGTGCACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHCEAPA*SCALHF
Trigger: AAAATGAAGTGCACAAGAGCACGCAGGCGCTTCACA...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGTCGCCCACAGTGGGATaGGGTCTGGAAATCAGAGTG +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWSPTVG*GLEIRV
Trigger: CACTCTGATTTCCAGACCTCATCCCACTGTGGGCGA...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCCAGGTGTCTGTGGCTaGGGGGACGGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRPGVCG*GDGCCG
Trigger: GCCACAGCAGCCGTCCCCGCAGCCACAGACACCTGG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCGCGCTGCGGGACAGTaGTCCTGCCCCCTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRRAAGQ*SCPLPE
Trigger: TTCAGGCAGGGGGCAGGAGCACTGTCCCGCAGCGCG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTAAGAGGGTGACGCGCTaGGGGACAGTGCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVKRVTR*GTVLLP
Trigger: GGGCAGGAGCACTGTCCCGCAGCGCGTCACCCTCTT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGAGACAGGCTaGTCGCTGTGTACACCGGTG +
Preference number: 4 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGCCETG*SLCTPV
Trigger: CACCGGTGTACACAGCGACCAGCCTGTCTCACAGCA...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACTTTGAAGAGTGCGTATaGATACTGCTTTCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHFEECV*ILLSPR
Trigger: TCTTGGGGAAAGCAGTATTCATACGCACTCTTCAAA...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGTTAAACCTGGGAGGCTaGTGTTGCAGTGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWLNLGG*CCSGPR
Trigger: TCTTGGCCCACTGCAACATCAGCCTCCCAGGTTTAA...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp AGGCTGGTCGCTGTGTACACCGGTGGAGATTGTGTCCTCATGCGGGAGGTCGGGGTCTGGAAATCAGAGTaGACACCTCATGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLVAVYTGGDCVLMREVGVWKSE*TPHGAA
Trigger: CGCTGCCCCATGAGGTGTCCACTCTGATTTCCAGAC...CCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCGGGACTCGCCCACAGTaGGATGAGGTCTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGGTRPQ*DEVWKS
Trigger: TGATTTCCAGACCTCATCCCACTGTGGGCGAGTCCC...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCACATGCTGCCCTGGTTaGTCTCCAATTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGTCCPG*SPIPGL
Trigger: GAGGCCAGGAATTGGAGACCAACCAGGGCAGCATGT...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
3UTR CAA 72 bp GTGAGACAGGCTGGTCGCTGTGTACACCGGTGGAGATaGTGTCCTCATGCGGGAGGTCGGGGTCGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: VRQAGRCVHRWR*CPHAGGRGRSR
Trigger: TCTACTACGACCCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCTGTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp AGGCTGGTCGCTGTGTACACCGGTGGAGATTGTGTCCTCATGCGGGAGGTCGGGCCTCCAGGACCTCGTTaGAATTGTCCACGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RLVAVYTGGDCVLMREVGPPGPR*NCPRKV
Trigger: CACTTTCCGTGGACAATTTCAACGAGGTCCTGGAGG...CCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACTCATGTTTCACAATCTaGTTGAGGATTTCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHSCFTI*LRISFS
Trigger: GGAGAACGAAATCCTCAAGCAGATTGTGAAACATGA...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTTTTTCGGCGTGGAGCTaGCAGGTGTCTGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVFSAWS*QVSVAA
Trigger: CGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAA...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACACCATCTCTTTAAAGTaGAACAGCATTCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHTISLK*NSIHQG
Trigger: TCCCTGATGAATGCTGTTCCACTTTAAAGAGATGGT...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGAGGTGAACTGCCTCTaGATGAAGCCGTACTGCCGC +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVEVNCL*MKPYCR
Trigger: GCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGGAAGAATCCAGAGACTaGATTAAAGCGGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWEESRD*IKAVAW
Trigger: CCATGCCACCGCTTTAATCCAGTCTCTGGATTCTTC...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTGCCGCCTCCTTCCATaGCCGGAGGACGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDCRLLP*PEDAAG
Trigger: GCCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCTGCCGCCTCCTTCCATaGCCGGAGGACGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSCRLLP*PEDAAG
Trigger: GCCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCA...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGGTCATGCTCTTAACTTaGGTTATTTACCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWVMLLT*VIYRSQ
Trigger: CTGGCTGCGGTAAATAACCCAAGTTAAGAGCATGAC...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACACCAAGAGTAAACTTTaGATGGTCCAGGATAAAATT +
Preference number: 4 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHTKSKL*MVQDKI
Trigger: AATTTTATCCTGGACCATCCAAAGTTTACTCTTGGT...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp AGGCTGGTCGCTGTGTACACCGGTGGAGATTGTGTCCTCATGCGGGAGGTCGGGATCCACTGGGATGGATaGGATGAAGTCAACCACAAA +
Preference number: 4 (lower is better)
Translates to: RLVAVYTGGDCVLMREVGIHWDG*DEVNHK
Trigger: TTTGTGGTTGACTTCATCTCATCCATCCCAGTGGAT...CCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTTATACTTCTCTTaGTACTGCCGCCTCGAAGAA +
Preference number: 4 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGCLYFS*YCRLEE
Trigger: TTCTTCGAGGCGGCAGTATCAAGAGAAGTATAAGCA...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCGCTGCCCTTAGTGGCTaGGGTCCGGGCTCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSAALSG*GPGSGA
Trigger: CGCACCGGAGCCCGGACCGCAGCCACTAAGGGCAGC...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp AGGCTGGTCGCTGTGTACACCGGTGGAGATTGTGTCCTCATGCGGGAGGTCGGGGCAGGGTTGTGCAAGTaGAGGGTTGTTAAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: RLVAVYTGGDCVLMREVGAGLCK*RVVKKE
Trigger: TTCCTTTTTAACAACCCTGCACTTGCACAACCCTGC...CCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTATTTTCAAGGTGGGATaGGGGGAGTGTCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVIFKVG*GECQQG
Trigger: GCCTTGCTGACACTCCCCGCATCCCACCTTGAAAAT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTACGAACAGGGCTCACTaGAGCCTTGACCTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVTNRAH*SLDLLS
Trigger: ACTTAGGAGGTCAAGGCTGCAGTGAGCCCTGTTCGT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGTCTGGAAATCAGAGTaGACACCTCATGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRVWKSE*TPHGAA
Trigger: CGCTGCCCCATGAGGTGTCCACTCTGATTTCCAGAC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTTCCTCTTCACCCTGTaGGACACTCCAGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRFLFTL*DTPAAL
Trigger: CAATGCAGCTGGAGTGTCTCACAGGGTGAAGAGGAA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTTAAACCTGGGAGGCTaGTGTTGCAGTGGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRLNLGG*CCSGPR
Trigger: TCTTGGCCCACTGCAACATCAGCCTCCCAGGTTTAA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACAGTGCTCCTGCCCCCTaGCTGAAGGCCCGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDSAPAP*LKARSG
Trigger: CCCGGAACGGGCCTTCAGGCAGGGGGCAGGAGCACT...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTCGCGCTGCGGGACAGTaGTCCTGCCCCCTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIRAAGQ*SCPLPE
Trigger: TTCAGGCAGGGGGCAGGAGCACTGTCCCGCAGCGCG...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCCTACAATTTGGTGCATaGAGCAACCACAGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGLQFGA*SNHSSL
Trigger: TAAGGAACTGTGGTTGCTGCATGCACCAAATTGTAG...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCCGTCGCGGACGCCTTaGCGGGGAAGACGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSPSRTP*RGRRCC
Trigger: GCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTATGAGCCACCACGCCTaGCCTGAGAACTTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVMSHHA*PENLLY
Trigger: ATAAAGCAAGTTCTCAGGCCAGGCGTGGTGGCTCAT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 72 bp GTAATCCCAGCTACTCTGGAGGCTGATGCAGGAGAATaGCTTAAACCTGGGAGGCTGATGTTGCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VIPATLEADAGE*LKPGRLMLQWA
Trigger: GGCCCACTGCAACATCAGCCTCCCAGGTTTAAGCAATTCTCCTGCATCAGCCTCCAGAGTAGCTGGGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTCTGTCGGAAGAGGGTaGCGCGCTGCGGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDSVGRG*RAAGQC
Trigger: GCACTGTCCCGCAGCGCGTCACCCTCTTCCGACAGA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCACACACGGAGTTGCCGTaGTCCTTCGCGCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSHTELP*SFAPAP
Trigger: CGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTG...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCATGCATGAAGCCGTACTaGCGCCGGGGCCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSCMKPY*RRGPSA
Trigger: CGCCGAGGGGCCCCGGCGGCAGTACGGCTTCATGCA...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGAAGAATCCAGAGACTaGATTAAAGCGGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVEESRD*IKAVAW
Trigger: CCATGCCACCGCTTTAATCCAGTCTCTGGATTCTTC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTCTGCGAGGCGGAGAGTaGCCTGACTTCCCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHILRGGE*PDFPGQ
Trigger: CTGACCCGGGAAGTCAGGCCACTCTCCGCCTCGCAG...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTTGGTGGAGGGGGTGCTaGAGGGACTCCTCGGTTCGG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIWWRGC*RDSSVR
Trigger: CCGAACCGAGGAGTCCCTCCAGCACCCCCTCCACCA...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AGGCTGGTCGCTGTGTACACCGGTGGAGATTGTGTCCTCATGCGGGAGGTCGGGTTAAATAATTCATCTTaGTCACTTTGGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RLVAVYTGGDCVLMREVGLNNSS*SLWGPG
Trigger: TCCTGGACCCCAAAGTGATCAAGATGAATTATTTAA...CCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTCGGCTCCTTCTCGTATaGTATAATCTCCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVRLLLV*YNLQVE
Trigger: TTCAACCTGGAGATTATATCATACGAGAAGGAGCCG...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AGGCTGGTCGCTGTGTACACCGGTGGAGATTGTGTCCTCATGCGGGAGGTCGGGTATTTCTTTCTGCTTTaGCAATCAGCAGGGATCATA +
Preference number: 4 (lower is better)
Translates to: RLVAVYTGGDCVLMREVGYFFLL*QSAGII
Trigger: TATGATCCCTGCTGATTGTCAAAGCAGAAAGAAATA...CCCGACCTCCCGCATGAGGACACAATCTCCACCGGTGTACACAGCGACCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTCCCATGGTACAGTATaGGTACTTTTTAAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGSHGTV*VLFKVG
Trigger: ACCTACTTTAAAAAGTACTCATACTGTACCATGGGA...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR GCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCCACACGGAGTTGCCGTaGTCCTTCGCGCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCHTELP*SFAPAP
Trigger: CGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTG...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTGCATGAAGCCGTACTaGCGCCGGGGCCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCCMKPY*RRGPSA
Trigger: CGCCGAGGGGCCCCGGCGGCAGTACGGCTTCATGCA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTCTGGTGGGAAGTCCTaGAGTAGTGGTACTAAGAAC +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRSGGKS*SSGTKN
Trigger: GTTCTTAGTACCACTACTGCAGGACTTCCCACCAGA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGTTCAACTTTACCCCTaGTTTCTGTCACCATGTCTG +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVVQLYP*FLSPCL
Trigger: CAGACATGGTGACAGAAAGCAGGGGTAAAGTTGAAC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATACCGTCGCGGACGCCTTaGCGGGGAAGACGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIPSRTP*RGRRCC
Trigger: GCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGG...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCCGGGGACGGCTGCTGTaGCTGAGTCTGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCRGRLL*LSLRRL
Trigger: CAGCCGCCGCAGACTCAGCCACAGCAGCCGTCCCCG...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATGCTGCCAGGTGTCTGTaGCTGCGGGGACGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDAARCL*LRGRLL
Trigger: CAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGC...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTGACGGCTGCTGTGGCTaGGTCTGCGGCGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFDGCCG*VCGGWD
Trigger: GTCCCAGCCGCCGCAGACTCAGCCACAGCAGCCGTC...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGGAATTGTTCACTTATaGAGAGGTCATCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRGIVHL*RGHPDL
Trigger: CAGGTCTGGATGACCTCTTCATAAGTGAACAATTCC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTACAGACATTTCAATGTaGATCCTCCCCGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVTDISM*ILPVDK
Trigger: CTTATCAACGGGGAGGATTCACATTGAAATGTCTGT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTGATCCCATGCTATGTTaGCTTGTCATCTCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVDPMLC*LVISRN
Trigger: ATTTCTGGAGATGACAAGTCAACATAGCATGGGATC...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGCTGCCCTTAGTGGCTaGGGTCCGGGCTCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPAALSG*GPGSGA
Trigger: CGCACCGGAGCCCGGACCGCAGCCACTAAGGGCAGC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTACGAAGAGTTGGGCTTaGCGCCTCCTTCCATGCCCG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHITKSWA*RLLPCP
Trigger: CGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGT...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCACACGGAGTTGCCGTaGTCCTTCGCGCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFHTELP*SFAPAP
Trigger: CGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTTCTGTACAGGAGGGCTaGAGACCGCGGTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHISVQEG*RPRWCR
Trigger: CCTACACCACCGCGGTCTGCAGCCCTCCTGTACAGA...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGCGGGACAGTGCTCCTaGCCCCTGCCTGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPAGQCS*PLPEGP
Trigger: CGGGCCTTCAGGCAGGGGGCAGGAGCACTGTCCCGC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATAAGAGGGTGACGCGCTaGGGGACAGTGCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDKRVTR*GTVLLP
Trigger: GGGCAGGAGCACTGTCCCGCAGCGCGTCACCCTCTT...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGCAGGGTTGTGCAAGTaGAGGGTTGTTAAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRAGLCK*RVVKKE
Trigger: TTCCTTTTTAACAACCCTGCACTTGCACAACCCTGC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAGCGCCTCCCCTCGGCTaGCCTCTGTTGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSAPPLG*PLLARK
Trigger: CTTTCTGGCCAACAGAGGGCAGCCGAGGGGAGGCGC...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGCTGCCAGGTGTCTGTaGCTGCGGGGACGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCAARCL*LRGRLL
Trigger: CAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGTTTCACAATCTGCTTaGGGATTTCGTTCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRVSQSA*GFRSPD
Trigger: ATCAGGAGAACGAAATCCTCAAGCAGATTGTGAAAC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGTCAGGTTGGTGTTGTaGAGCGCCTGCGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDVRLVL*SACVLL
Trigger: CAAGAGCACGCAGGCGCTTCACAACACCAACCTGAC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCTTGTTGACCCCGGGCTaGAGCATGGAGGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLLTPG*SMEVNC
Trigger: GCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAA...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTACCTGCTGCTGCGGCTaGTGTTGCATGAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHITCCCG*CCMSDS
Trigger: GCTGTCACTCATGCAACAGCAGCCGCAGCAGCAGGT...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAACCAGGTGTCTGTGGCTaGGGGGACGGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKPGVCG*GDGCCG
Trigger: GCCACAGCAGCCGTCCCCGCAGCCACAGACACCTGG...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTACAGTATTCCTGACATaGCATCATATGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRTVFLT*HHMSPA
Trigger: TGCTGGTGACATATGATGGCATGTCAGGAATACTGT...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCTACAATTTGGTGCATaGAGCAACCACAGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRLQFGA*SNHSSL
Trigger: TAAGGAACTGTGGTTGCTGCATGCACCAAATTGTAG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTGCTGTGAGACAGGCTaGTCGCTGTGTACACCGGTG +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDCCETG*SLCTPV
Trigger: CACCGGTGTACACAGCGACCAGCCTGTCTCACAGCA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGGCTGCAGACCGCGGTaGTGTAGGAGCAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIGCRPR*CRSRVT
Trigger: TGTCACCCTGCTCCTACACCACCGCGGTCTGCAGCC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGCGGCTGCTGTTGCATaGGTGACAGCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPAAAVA*VTAGRR
Trigger: CCGCCTCCCAGCTGTCACTCATGCAACAGCAGCCGC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTTTGCCTCTACACATCTaGATATTCTCTGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVLPLHI*IFSVEN
Trigger: GTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAA...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGACGAAGAGTTGGGCTTaGCGCCTCCTTCCATGCCCG +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLTKSWA*RLLPCP
Trigger: CGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGT...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTAAAAATTCTCACCACTaGACTGGCGAGATCATATGT +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRKNSHH*TGEIIC
Trigger: ACATATGATCTCGCCAGTGCAGTGGTGAGAATTTTT...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGAGTGCTCCTGCCCCCTaGCTGAAGGCCCGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMSAPAP*LKARSG
Trigger: CCCGGAACGGGCCTTCAGGCAGGGGGCAGGAGCACT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTATATGTAAATGGTCTTaGAGCTTTCCCATAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVICKWS*SFPIGS
Trigger: AGAACCTATGGGAAAGCTGCAAGACCATTTACATAT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGACCAGGTCTTGACATaGTGCCCTGGTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIDQVLT*CPGWSP
Trigger: TGGAGACCAACCAGGGCAGCATGTCAAGACCTGGTC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCTGCGAGGCGGAGAGTaGCCTGACTTCCCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFLRGGE*PDFPGQ
Trigger: CTGACCCGGGAAGTCAGGCCACTCTCCGCCTCGCAG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCATCGGCTGCCCTCTGTTaGCCAGAAAGGGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSSAALC*PERVSP
Trigger: GGGAGAGACCCTTTCTGGCCAACAGAGGGCAGCCGA...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTGCATTAGGCACAAATaGTTACTAAGGGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRCIRHK*LLREFF
Trigger: AAAGAACTCCCTTAGTAATCATTTGTGCCTAATGCA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCTTTCAGAAGGTTTTTaGAATCCCTATTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRLSEGF*NPYFPL
Trigger: AAGTGGGAAATAGGGATTTCAAAAACCTTCTGAAAG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAGAGGTGAACTGCCTCTaGATGAAGCCGTACTGCCGC +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSEVNCL*MKPYCR
Trigger: GCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTC...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATGAGGTGAACTGCCTCTaGATGAAGCCGTACTGCCGC +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDEVNCL*MKPYCR
Trigger: GCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTC...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATTGTTGACCCCGGGCTaGAGCATGGAGGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIILLTPG*SMEVNC
Trigger: GCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGCCTGCGTGCTCTTGTaGACTTCATTTTTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIACVLL*TSFFGV
Trigger: CACGCCGAAAAATGAAGTGCACAAGAGCACGCAGGC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTCTTGGAAGAGCAGCTaGTGGTGGAGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCSWKSS*WWRGCW
Trigger: CCAGCACCCCCTCCACCAGCAGCTGCTCTTCCAAGA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACACGAACAGGGCTCACTaGAGCCTTGACCTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDTNRAH*SLDLLS
Trigger: ACTTAGGAGGTCAAGGCTGCAGTGAGCCCTGTTCGT...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGACGCTGCAGTTCCATaGACCACACTTTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDDAAVP*TTLSTV
Trigger: CACTGTGGAAAGTGTGGTGCATGGAACTGCAGCGTC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTCAGCTGGTAACTTATaGAATGACATGTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRSAGNL*NDMYCS
Trigger: GGAACAATACATGTCATTCCATAAGTTACCAGCTGA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCCTTCCCGGGTCAGGTTaGTGTTGTGAAGCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCLPGSG*CCEAPA
Trigger: CGCAGGCGCTTCACAACACCAACCTGACCCGGGAAG...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTTCACGGGTTGAGGGATaGAGGCCAGGGACTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFSRVEG*RPGTRP
Trigger: TGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGA...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTGTACTGATATGTAAATaGTCTTGCAGCTTTCCCATA +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRVLICK*SCSFPI
Trigger: TATGGGAAAGCTGCAAGACCATTTACATATCAGTAC...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTCTGGGATGGATGAGATaGAGTCAACCACAAACCAGC +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHILGWMR*SQPQTS
Trigger: GCTGGTTTGTGGTTGACTTCATCTCATCCATCCCAG...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACCTGGGATGGATGAGATaGAGTCAACCACAAACCAGC +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDLGWMR*SQPQTS
Trigger: GCTGGTTTGTGGTTGACTTCATCTCATCCATCCCAG...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGAGTGCAGGTTGCTGTaGGACAGGCTGGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKECRLL*DRLVAV
Trigger: CACAGCGACCAGCCTGTCTCACAGCAACCTGCACTC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGTCAGGTTGGTGTTGTaGAGCGCCTGCGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCVRLVL*SACVLL
Trigger: CAAGAGCACGCAGGCGCTTCACAACACCAACCTGAC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGTCCCTGTCAAAGCCTaGATTGGAAGCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIVPVKA*IGSRVS
Trigger: GCTGACCCTGCTTCCAATTCAGGCTTTGACAGGGAC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATTTTCGGCGTGGAGCTaGCAGGTGTCTGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPFSAWS*QVSVAA
Trigger: CGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTGCTGGTGGAGGGGGTaGTGGAGGGACTCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMCWWRG*WRDSSV
Trigger: AACCGAGGAGTCCCTCCAGCACCCCCTCCACCAGCA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTGCACTGAAAGACCATaGATTTCAATTTTGCTTATG +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRCTERP*ISILLM
Trigger: CATAAGCAAAATTGAAATGCATGGTCTTTCAGTGCA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGTGAGACACTCCAGCTaGATTGAACTGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDVRHSS*IELPVF
Trigger: GAACACTGGCAGTTCAATGCAGCTGGAGTGTCTCAC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTCAGGTCTTGACATGCTaGCCTGGTTGGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIQVLTC*PGWSPI
Trigger: AATTGGAGACCAACCAGGGCAGCATGTCAAGACCTG...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACCAGGTCTTGACATGCTaGCCTGGTTGGTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDQVLTC*PGWSPI
Trigger: AATTGGAGACCAACCAGGGCAGCATGTCAAGACCTG...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCTCAGGTCCCACCCACTaGCTAACAACAGATGCTCTA +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSSGPTH*LTTDAL
Trigger: TAGAGCATCTGTTGTTAGGCAGTGGGTGGGACCTGA...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGTTTTCCACCGCCTTCTaGCTCCCAAACATGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLFSTAF*LPNMRR
Trigger: CCTCCGCATGTTTGGGAGCCAGAAGGCGGTGGAAAA...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTCAGTACGACGTCCTTTaGTCAGCAGGCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIQYDVL*SAGKSL
Trigger: GAGAGATTTGCCTGCTGACCAAAGGACGTCGTACTG...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTATCAGCTCGAACACTaGCAGTACGACGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDYQLEH*QYDVLW
Trigger: CCAAAGGACGTCGTACTGCCAGTGTTCGAGCTGATA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGGCTCTCCTCATCATTaGATATTCCTCCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIGSPHH*IFLQDL
Trigger: GAGGTCCTGGAGGAATATCCAATGATGAGGAGAGCC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCATGTTTCTTTCCCATaGTACAGTATGAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRHVSFP*YSMSTF
Trigger: AAAAGTACTCATACTGTACCATGGGAAAGAAACATG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGAGTGCAGGTTGCTGTaGGACAGGCTGGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFECRLL*DRLVAV
Trigger: CACAGCGACCAGCCTGTCTCACAGCAACCTGCACTC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGTCCCTGTCAAAGCCTaGATTGGAAGCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCVPVKA*IGSRVS
Trigger: GCTGACCCTGCTTCCAATTCAGGCTTTGACAGGGAC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAAGCATGGAGGTGAACTaGCTCTGCATGAAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLSMEVN*LCMKPY
Trigger: GTACGGCTTCATGCAGAGGCAGTTCACCTCCATGCT...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGACGCTGCAGTTCCATaGACCACACTTTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIDAAVP*TTLSTV
Trigger: CACTGTGGAAAGTGTGGTGCATGGAACTGCAGCGTC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATCTGTGTGCTGGGACTaGGGGAGTGCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPSVCWD*GSAGCC
Trigger: ACAGCAACCTGCACTCCCCCAGTCCCAGCACACAGA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATCTTCATTTTTCGGCGTaGAGCTGCCAGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDLHFSA*SCQVSV
Trigger: CACAGACACCTGGCAGCTCCACGCCGAAAAATGAAG...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGCTTCCCGGGTCAGGTTaGTGTTGTGAAGCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMLPGSG*CCEAPA
Trigger: CGCAGGCGCTTCACAACACCAACCTGACCCGGGAAG...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGGGACTCGCCCACAGTaGGATGAGGTCTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCGTRPQ*DEVWKS
Trigger: TGATTTCCAGACCTCATCCCACTGTGGGCGAGTCCC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCACATGCTGCCCTGGTTaGTCTCCAATTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCTCCPG*SPIPGL
Trigger: GAGGCCAGGAATTGGAGACCAACCAGGGCAGCATGT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCTTTGGGGTCCAGGATaGTTTCAGAACTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLWGPG*FQNCLH
Trigger: ATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCTGGGATGGATGAGATaGAGTCAACCACAAACCAGC +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLLGWMR*SQPQTS
Trigger: GCTGGTTTGTGGTTGACTTCATCTCATCCATCCCAG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCATCCACTGGGATGGATaGGATGAAGTCAACCACAAA +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSIHWDG*DEVNHK
Trigger: TTTGTGGTTGACTTCATCTCATCCATCCCAGTGGAT...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGAGAGGTCAGACATGCTaGCTGGGGCTTGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMRGQTC*LGLGLH
Trigger: ATGGAGCCCAAGCCCCAGTCAGCATGTCTGACCTCT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTGCTTATACTTCTCTTaGTACTGCCGCCTCGAAGAA +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDCLYFS*YCRLEE
Trigger: TTCTTCGAGGCGGCAGTATCAAGAGAAGTATAAGCA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTTCCTCTTCACCCTGTaGGACACTCCAGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCFLFTL*DTPAAL
Trigger: CAATGCAGCTGGAGTGTCTCACAGGGTGAAGAGGAA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTTGTTGACCCCGGGCTaGAGCATGGAGGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFLLTPG*SMEVNC
Trigger: GCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCACCTCACAATGCGAAGTaGCCTGGCTGTCTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSPHNAK*PGCLVN
Trigger: GTTTACAAGACAGCCAGGGCACTTCGCATTGTGAGG...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCATGGGAGCGATTGCCTaGACCATCTCCCTGTCATGT +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCMGAIA*TISLSC
Trigger: ACATGACAGGGAGATGGTGCAGGCAATCGCTCCCAT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTGTGCTACAATTTGGTaGATGCAGCAACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDCATIW*MQQPQF
Trigger: GAACTGTGGTTGCTGCATGCACCAAATTGTAGCACA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCATGCTCGTTACTCTTaGTCTACTTCTGCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLHARYS*STSAQR
Trigger: ACGCTGGGCAGAAGTAGAGCAAGAGTAACGAGCATG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTATCCGCTCTCCACACATaGTCGTTACTCTTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLSALHT*SLLLLY
Trigger: GTAGAGCAAGAGTAACGAGCATGTGTGGAGAGCGGA...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATTTTCCACCGCCTTCTaGCTCCCAAACATGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPFSTAF*LPNMRR
Trigger: CCTCCGCATGTTTGGGAGCCAGAAGGCGGTGGAAAA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTATGCTGACTGGGGCTTaGGCTCCATACCCAATGCAC +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFMLTGA*APYPMH
Trigger: GTGCATTGGGTATGGAGCCCAAGCCCCAGTCAGCAT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAATGCTGACTGGGGCTTaGGCTCCATACCCAATGCAC +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKMLTGA*APYPMH
Trigger: GTGCATTGGGTATGGAGCCCAAGCCCCAGTCAGCAT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGGCTCTCCTCATCATTaGATATTCCTCCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIGSPHH*IFLQDL
Trigger: GAGGTCCTGGAGGAATATCCAATGATGAGGAGAGCC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTCTGTGTGCTGGGACTaGGGGAGTGCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMSVCWD*GSAGCC
Trigger: ACAGCAACCTGCACTCCCCCAGTCCCAGCACACAGA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCCTTCATTTTTCGGCGTaGAGCTGCCAGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCLHFSA*SCQVSV
Trigger: CACAGACACCTGGCAGCTCCACGCCGAAAAATGAAG...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGTATGTGCTACAATTTaGTGCATGCAGCAACCACAG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIVCATI*CMQQPQ
Trigger: CTGTGGTTGCTGCATGCACCAAATTGTAGCACATAC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATTTGGTCTCCAATTCCTaGCCTCAAGCATTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDLVSNS*PQAFLP
Trigger: TGGGAGGAATGCTTGAGGCCAGGAATTGGAGACCAA...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTCGCCCACAGTGGGATaGGGTCTGGAAATCAGAGTG +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFSPTVG*GLEIRV
Trigger: CACTCTGATTTCCAGACCTCATCCCACTGTGGGCGA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAACTAAGGGAGTTCTTTaGGAAGAAGCAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIITKGVL*EEAGAH
Trigger: GTGAGCACCTGCTTCTTCTCAAAGAACTCCCTTAGT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGAAAGTCATTGCTTTTaGGGGGTAATAGCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIESHCF*GVIAGV
Trigger: TACACCTGCTATTACCCCTCAAAAGCAATGACTTTC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCCCACAACTCTAGCCTaGATGTGCTTGGTTACCAAA +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLPTTLA*MCLVTK
Trigger: TTTGGTAACCAAGCACATTCAGGCTAGAGTTGTGGG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCTCCTGTTGATAAAATaGCTGAGATCAGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLLLIK*LRSAAV
Trigger: TACAGCTGCTGATCTCAGTCATTTTATCAACAGGAG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAAGCATGGAGGTGAACTaGCTCTGCATGAAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPSMEVN*LCMKPY
Trigger: GTACGGCTTCATGCAGAGGCAGTTCACCTCCATGCT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTAGCATGGAGGTGAACTaGCTCTGCATGAAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFSMEVN*LCMKPY
Trigger: GTACGGCTTCATGCAGAGGCAGTTCACCTCCATGCT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGATAATCCAGAAGCCTaGAGTTTTAACCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIDNPEA*SFNPFL
Trigger: CAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAATGGGAGCGATTGCCTaGACCATCTCCCTGTCATGT +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKMGAIA*TISLSC
Trigger: ACATGACAGGGAGATGGTGCAGGCAATCGCTCCCAT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAATTGATGGGAGCGATTaGCTGCACCATCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPIDGSD*LHHLPV
Trigger: GACAGGGAGATGGTGCAGGCAATCGCTCCCATCAAT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATGTGAAGCGCCTGCGTaGTCTTGTGCACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIICEAPA*SCALHF
Trigger: AAAATGAAGTGCACAAGAGCACGCAGGCGCTTCACA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACACAGTATTCCTGACATaGCATCATATGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDTVFLT*HHMSPA
Trigger: TGCTGGTGACATATGATGGCATGTCAGGAATACTGT...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCACAATGCGAAGTGCCCTaGCTGTCTTGTAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSQCEVP*LSCKLQ
Trigger: CTGAAGTTTACAAGACAGCCAGGGCACTTCGCATTG...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATCAATGCGAAGTGCCCTaGCTGTCTTGTAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDQCEVP*LSCKLQ
Trigger: CTGAAGTTTACAAGACAGCCAGGGCACTTCGCATTG...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCACTGGATTAAAGCGGTaGCATGGCCGACAAACATGG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCTGLKR*HGRQTW
Trigger: CCATGTTTGTCGGCCATGCCACCGCTTTAATCCAGT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATGATCTAGTCGGTCAATaGCAACTGTCTCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDDLVGQ*QLSQRL
Trigger: GAGCCTTTGAGACAGTTGCCATTGACCGACTAGATC...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTCGCTGTGTACACCGGTaGAGATTGTGTCCTCATGCG +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFRCVHR*RLCPHA
Trigger: CGCATGAGGACACAATCTCCACCGGTGTACACAGCG...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAAGGCTGATGTTGCAGTaGGCCAAGATCCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPRLMLQ*AKILPL
Trigger: CAATGGCAGGATCTTGGCCCACTGCAACATCAGCCT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCTCTGTTGTATTGCATaGCCCACAGTCTTACTTAAG +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLCCIA*PTVLLK
Trigger: CTTAAGTAAGACTGTGGGCCATGCAATACAACAGAG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCAGAACCAAAGACATGTaGGTGAACTCACATCTTCCT +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSRTKDM*VNSHLP
Trigger: AGGAAGATGTGAGTTCACCCACATGTCTTTGGTTCT...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR CAA 72 bp TTCTTTCCCTTCTCACAGGTTCTAGCTCTTATCTTCTaGTACCCCTTCCCTGCCGCAATATATTATCTTACG +
Preference number: 4 (lower is better)
Translates to: FFPFSQVLALIF*YPFPAAIYYLT
Trigger: CGTAAGATAATATATTGCGGCAGGGAAGGGGTACAAGAAGATAAGAGCTAGAACCTGTGAGAAGGGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCAGTGGTACTAAGAACTaGAGACAACCATCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCSGTKN*RQPSQW
Trigger: CCACTGGGATGGTTGTCTTCAGTTCTTAGTACCACT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGCCTCCAGGACCTCGTTaGAATTGTCCACGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMPPGPR*NCPRKV
Trigger: CACTTTCCGTGGACAATTTCAACGAGGTCCTGGAGG...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACAATTACCAGCTACAGTaGAGACACAGACAACACTTA +
Preference number: 4 (lower is better)
Translates to: GKAKDSALLVIILLGDTDNYQLQ*RHRQHL
Trigger: TAAGTGTTGTCTGTGTCTTCACTGTAGCTGGTAATT...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAAGCAAAATATGGGCCTaGTTGGTCAGATTCACTCCA +
Preference number: 4 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLSKIWA*LVRFTP
Trigger: TGGAGTGAATCTGACCAATCAGGCCCATATTTTGCT...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCTGTTTCTTCCCTGTTaGACAGCATTACTAATGGGC +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLLFLPC*TALLMG
Trigger: GCCCATTAGTAATGCTGTTCAACAGGGAAGAAACAG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCTCTTCAGTGGCTTGTaGTTGTCACATATTCCATTT +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLFSGL*LSHIPF
Trigger: AAATGGAATATGTGACAATCACAAGCCACTGAAGAG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCCTCACAATGCGAAGTaGCCTGGCTGTCTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFPHNAK*PGCLVN
Trigger: GTTTACAAGACAGCCAGGGCACTTCGCATTGTGAGG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGTTCAACTTTACCCCTaGTTTCTGTCACCATGTCTG +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIVQLYP*FLSPCL
Trigger: CAGACATGGTGACAGAAAGCAGGGGTAAAGTTGAAC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGATTTTCAAGGTGGGATaGGGGGAGTGTCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMIFKVG*GECQQG
Trigger: GCCTTGCTGACACTCCCCGCATCCCACCTTGAAAAT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGTGAGACACTCCAGCTaGATTGAACTGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKVRHSS*IELPVF
Trigger: GAACACTGGCAGTTCAATGCAGCTGGAGTGTCTCAC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATTTCTCACCACTGCACTaGCGAGATCATATGTCATGT +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDFSPLH*RDHMSC
Trigger: ACATGACATATGATCTCGCCAGTGCAGTGGTGAGAA...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAACTGGATTAAAGCGGTaGCATGGCCGACAAACATGG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPTGLKR*HGRQTW
Trigger: CCATGTTTGTCGGCCATGCCACCGCTTTAATCCAGT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTATGAGCCACCACGCCTaGCCTGAGAACTTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFMSHHA*PENLLY
Trigger: ATAAAGCAAGTTCTCAGGCCAGGCGTGGTGGCTCAT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 72 bp TTTCCTTGTCTAGCCAAGATCCCATGCTATGTTGACTaGTCATCTCCAGAAATGTCTTCACACTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: FPCLAKIPCYVD*SSPEMSSHLEV
Trigger: AACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATAGCATGGGATCTTGGCTAGACAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 72 bp ACTTCCCCAAATTTGCTGAATTTAGCATTAGCCAGCTaGATACTAAAACACCCAGAACCAAAGACATGTGGG +
Preference number: 4 (lower is better)
Translates to: TSPNLLNLALAS*ILKHPEPKTCG
Trigger: CCCACATGTCTTTGGTTCTGGGTGTTTTAGTATCAAGCTGGCTAATGCTAAATTCAGCAAATTTGGGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGAATCCCAGTAAAACCTaGAATCACTGTAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLNPSKT*NHCKGG
Trigger: TCCACCCTTACAGTGATTTCAGGTTTTACTGGGATT...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAAGTGGTACTAAGAACTaGAGACAACCATCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKSGTKN*RQPSQW
Trigger: CCACTGGGATGGTTGTCTTCAGTTCTTAGTACCACT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCCGGCTCCTTCTCGTATaGTATAATCTCCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCRLLLV*YNLQVE
Trigger: TTCAACCTGGAGATTATATCATACGAGAAGGAGCCG...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAACTAAGGGAGTTCTTTaGGAAGAAGCAGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKTKGVL*EEAGAH
Trigger: GTGAGCACCTGCTTCTTCTCAAAGAACTCCCTTAGT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATGAAAGTCATTGCTTTTaGGGGGTAATAGCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDESHCF*GVIAGV
Trigger: TACACCTGCTATTACCCCTCAAAAGCAATGACTTTC...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAACAGACATTTCAATGTaGATCCTCCCCGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIITDISM*ILPVDK
Trigger: CTTATCAACGGGGAGGATTCACATTGAAATGTCTGT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCACCACACTTTCCACAGTaGGGCACGCAAGAACATTTA +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPPHFPQ*GTQEHL
Trigger: TAAATGTTCTTGCGTGCCTCACTGTGGAAAGTGTGG...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCCACACTTTCCACAGTaGGGCACGCAAGAACATTTA +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFPHFPQ*GTQEHL
Trigger: TAAATGTTCTTGCGTGCCTCACTGTGGAAAGTGTGG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCTTGAAGATAGGGATATaGACTCCTTTGCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLKIGI*TPLLDD
Trigger: ATCATCAAGCAAAGGAGTTCATATCCCTATCTTCAA...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAGAGTATACTCTTATATaGCCACATGGCCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSEYTLI*PHGLPF
Trigger: AAATGGCAGGCCATGTGGTCATATAAGAGTATACTC...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGATAATCCAGAAGCCTaGAGTTTTAACCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLDNPEA*SFNPFL
Trigger: CAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATC...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGCCTCACAATGCGAAGTaGCCTGGCTGTCTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMPHNAK*PGCLVN
Trigger: GTTTACAAGACAGCCAGGGCACTTCGCATTGTGAGG...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTTCTGGTGGGAAGTCCTaGAGTAGTGGTACTAAGAAC +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFSGGKS*SSGTKN
Trigger: GTTCTTAGTACCACTACTGCAGGACTTCCCACCAGA...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTCCTCATCAAAGATTTTaGCTTGGTATCTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIPHQRF*LGICVH
Trigger: ATGAACACAGATACCAAGGCAAAATCTTTGATGAGG...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATACTTGTACCCCTTCCCTaGCGCAATATATTATCTTAC +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIILVPLP*RNILSY
Trigger: GTAAGATAATATATTGCGGCAGGGAAGGGGTACAAG...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATCTTGTACCCCTTCCCTaGCGCAATATATTATCTTAC +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDLVPLP*RNILSY
Trigger: GTAAGATAATATATTGCGGCAGGGAAGGGGTACAAG...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATACTAGCCAAGATCCCATaGTATGTTGACTTGTCATCT +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIILAKIP*YVDLSS
Trigger: AGATGACAAGTCAACATAGCATGGGATCTTGGCTAG...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAACAGAGCTAATGATGTaGCAGATTAGCAATCAGACC +
Preference number: 4 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLTELMM*QISNQT
Trigger: GGTCTGATTGCTAATCTGGCACATCATTAGCTCTGT...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTACACATACAAAAACACTaGTACCGCCTCACAGAAATC +
Preference number: 4 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLHIQKH*YRLTEI
Trigger: GATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTG...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCACAATGCGAAGTGCCCTaGCTGTCTTGTAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPQCEVP*LSCKLQ
Trigger: CTGAAGTTTACAAGACAGCCAGGGCACTTCGCATTG...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGCAGTACGACGTCCTTTaGTCAGCAGGCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMQYDVL*SAGKSL
Trigger: GAGAGATTTGCCTGCTGACCAAAGGACGTCGTACTG...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTATCAGCTCGAACACTaGCAGTACGACGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMYQLEH*QYDVLW
Trigger: CCAAAGGACGTCGTACTGCCAGTGTTCGAGCTGATA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTATTTCCCACTTGATCTaGGTTCCTCTTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFISHLI*VPLHPV
Trigger: CACAGGGTGAAGAGGAACCCAGATCAAGTGGGAAAT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTTGGTCTCCAATTCCTaGCCTCAAGCATTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMLVSNS*PQAFLP
Trigger: TGGGAGGAATGCTTGAGGCCAGGAATTGGAGACCAA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAACCTTTGCCACTCTTTaGAGCGTGTGTGATATCTCC +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPTFATL*SVCDIS
Trigger: GGAGATATCACACACGCTCCAAAGAGTGGCAAAGGT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCAAATATGGGCCTGATTaGTCAGATTCACTCCATTTA +
Preference number: 4 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSKYGPD*SDSLHL
Trigger: TAAATGGAGTGAATCTGACCAATCAGGCCCATATTT...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTAGATTCAAATTGTTTTaGCATCAGTCGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIRFKLF*HQSGNQ
Trigger: CTGATTTCCCGACTGATGCCAAAACAATTTGAATCT...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCACTTTGGGGTCCAGGATaGTTTCAGAACTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPLWGPG*FQNCLH
Trigger: ATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAG...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAATCCACTGGGATGGATaGGATGAAGTCAACCACAAA +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKIHWDG*DEVNHK
Trigger: TTTGTGGTTGACTTCATCTCATCCATCCCAGTGGAT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTTCATTTGAGGATAATTaGTGGGAGCGATTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFSFEDN*WERLPA
Trigger: TGCAGGCAATCGCTCCCATCAATTATCCTCAAATGA...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATTTACAACAGTATTCCTaGCATGCCATCATATGTCAC +
Preference number: 4 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDLQQYS*HAIICH
Trigger: GTGACATATGATGGCATGTCAGGAATACTGTTGTAA...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAACTCTAACTCATCCCTaGTCATACAGTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIITLTHP*SYSCCK
Trigger: CTTACAACAACTGTATGATCAGGGATGAGTTAGAGT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGGAATTGTTCACTTATaGAGAGGTCATCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKGIVHL*RGHPDL
Trigger: CAGGTCTGGATGACCTCTTCATAAGTGAACAATTCC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGATCCCATGCTATGTTaGCTTGTCATCTCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCDPMLC*LVISRN
Trigger: ATTTCTGGAGATGACAAGTCAACATAGCATGGGATC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGGGATGTTTATATCAGTaGCTTTCCTCTCACAGGATA +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLGCLYQ*LSSHRI
Trigger: TATCCTGTGAGAGGAAAGTCACTGATATAAACATCC...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATCATGTTTCACAATCTaGTTGAGGATTTCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIISCFTI*LRISFS
Trigger: GGAGAACGAAATCCTCAAGCAGATTGTGAAACATGA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTTGCACTGAAAGACCATaGATTTCAATTTTGCTTATG +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHICTERP*ISILLM
Trigger: CATAAGCAAAATTGAAATGCATGGTCTTTCAGTGCA...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGGGTTTTCTAAACACTaGAGGTATGTAAGTATATAC +
Preference number: 4 (lower is better)
Translates to: CIELPVFPISCALLNIHIGFSKH*RYVSIY
Trigger: GTATATACTTACATACCTGCAGTGTTTAGAAAACCC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGTTTTATCTGATAGGATaGCATCTGTTCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLFYLIG*HLFILL
Trigger: CAGCAGGATGAACAGATGGCATCCTATCAGATAAAA...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGGATCTAGTCGGTCAATaGCAACTGTCTCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMDLVGQ*QLSQRL
Trigger: GAGCCTTTGAGACAGTTGCCATTGACCGACTAGATC...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAACCATCTCTTTAAAGTaGAACAGCATTCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIITISLK*NSIHQG
Trigger: TCCCTGATGAATGCTGTTCCACTTTAAAGAGATGGT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGATTTCCCACTTGATCTaGGTTCCTCTTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMISHLI*VPLHPV
Trigger: CACAGGGTGAAGAGGAACCCAGATCAAGTGGGAAAT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTACCTTTGCCACTCTTTaGAGCGTGTGTGATATCTCC +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFTFATL*SVCDIS
Trigger: GGAGATATCACACACGCTCCAAAGAGTGGCAAAGGT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAAATAGCAGTCTGGCTTaGATCACTGTCTTTAAACAC +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSNSSLA*ITVFKH
Trigger: GTGTTTAAAGACAGTGATCCAAGCCAGACTGCTATT...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR CAA 72 bp GTCATGCTCTTAACTTGGGTTATTTACCGCAGCCAGTaGTTAGGAATCTTTCAATTGTGTTCCAGTCATACT +
Preference number: 4 (lower is better)
Translates to: VMLLTWVIYRSQ*LGIFQLCSSHT
Trigger: AGTATGACTGGAACACAATTGAAAGATTCCTAACAACTGGCTGCGGTAAATAACCCAAGTTAAGAGCATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
3UTR CAA 72 bp GGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTaGCTGAATTTAGCATTAGCCAGCTTGATACTAAAA +
Preference number: 4 (lower is better)
Translates to: GSFQTSHITSPN*LNLALASLILK
Trigger: TTTTAGTATCAAGCTGGCTAATGCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAAATCCCAGTAAAACCTaGAATCACTGTAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPNPSKT*NHCKGG
Trigger: TCCACCCTTACAGTGATTTCAGGTTTTACTGGGATT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGTTAAATAATTCATCTTaGTCACTTTGGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLLNNSS*SLWGPG
Trigger: TCCTGGACCCCAAAGTGATCAAGATGAATTATTTAA...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAAGGATTTCGTTCTCCTaGTTGTTGAAAACACCAGTG +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKRISFS*LLKTPV
Trigger: CACTGGTGTTTTCAACAATCAGGAGAACGAAATCCT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGTTTCACAATCTGCTTaGGGATTTCGTTCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKVSQSA*GFRSPD
Trigger: ATCAGGAGAACGAAATCCTCAAGCAGATTGTGAAAC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTCATTTGAGGATAATTaGTGGGAGCGATTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMSFEDN*WERLPA
Trigger: TGCAGGCAATCGCTCCCATCAATTATCCTCAAATGA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATATTTCTTTCTGCTTTaGCAATCAGCAGGGATCATA +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIYFFLL*QSAGII
Trigger: TATGATCCCTGCTGATTGTCAAAGCAGAAAGAAATA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGTTCCCAAACAGACGTaGTGCTGTATTGAATTTATT +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIVPKQT*CCIEFI
Trigger: AATAAATTCAATACAGCATCACGTCTGTTTGGGAAC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTGTTTGGGTTTTTCTTaGGAAAGGGTTTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCCLGFS*ERVLLC
Trigger: ACAGAGCAAAACCCTTTCTCAAGAAAAACCCAAACA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCTTATAATTGGTTCATaGAAACAACTTCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLLIIGS*KQLPSS
Trigger: TGAGGAGGGAAGTTGTTTTCATGAACCAATTATAAG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGATAATCCAGAAGCCTaGAGTTTTAACCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPDNPEA*SFNPFL
Trigger: CAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTGTGCTACAATTTGGTaGATGCAGCAACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMCATIW*MQQPQF
Trigger: GAACTGTGGTTGCTGCATGCACCAAATTGTAGCACA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAATTCAAGCGATCCTCCTaGCTTAACTTTCTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKFKRSS*LNFLSN
Trigger: GTTACTCAGAAAGTTAAGGCAGGAGGATCGCTTGAA...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATTCAAGCGATCCTCCTaGCTTAACTTTCTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPFKRSS*LNFLSN
Trigger: GTTACTCAGAAAGTTAAGGCAGGAGGATCGCTTGAA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTAAGAATGTTCACCTTTaGCACTCTTTGGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFKNVHL*HSLERV
Trigger: CACACGCTCCAAAGAGTGGCAAAGGTGAACATTCTT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAACTAGCCAAGATCCCATaGTATGTTGACTTGTCATCT +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKLAKIP*YVDLSS
Trigger: AGATGACAAGTCAACATAGCATGGGATCTTGGCTAG...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTTCTCACCACTGCACTaGCGAGATCATATGTCATGT +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMFSPLH*RDHMSC
Trigger: ACATGACATATGATCTCGCCAGTGCAGTGGTGAGAA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGTCATGCTCTTAACTTaGGTTATTTACCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFVMLLT*VIYRSQ
Trigger: CTGGCTGCGGTAAATAACCCAAGTTAAGAGCATGAC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGTATGTGCTACAATTTaGTGCATGCAGCAACCACAG +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFVCATI*CMQQPQ
Trigger: CTGTGGTTGCTGCATGCACCAAATTGTAGCACATAC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCTGTTACAGAAGGCAATaGACACATTGTACTGATGTG +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCCYRRQ*THCTDV
Trigger: CACATCAGTACAATGTGTCCATTGCCTTCTGTAACA...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCATCTTATATGACCACATaGCCTGCCATTTTATCTGAT +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSSYMTT*PAILSD
Trigger: ATCAGATAAAATGGCAGGCCATGTGGTCATATAAGA...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTATATCTAAATTGTCTCTaGTTTTTACCTCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLYLNCL*FLPHLA
Trigger: TGCCAGGTGAGGTAAAAACCAGAGACAATTTAGATA...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCATATGAAATAGCAGTCTaGCTTGGATCACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KMSLTSTYKNTATASQKSYEIAV*LGSLSL
Trigger: TAAAGACAGTGATCCAAGCCAGACTGCTATTTCATA...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGAATCCCAGTAAAACCTaGAATCACTGTAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMNPSKT*NHCKGG
Trigger: TCCACCCTTACAGTGATTTCAGGTTTTACTGGGATT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTTTGAAGAGTGCGTATaGATACTGCTTTCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMFEECV*ILLSPR
Trigger: TCTTGGGGAAAGCAGTATTCATACGCACTCTTCAAA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTATTGTCCACGGAAAGTaGGTAAAGACGACAATATGT +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFIVHGK*VKTTIC
Trigger: ACATATTGTCGTCTTTACTCACTTTCCGTGGACAAT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAATTGTCCACGGAAAGTaGGTAAAGACGACAATATGT +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKIVHGK*VKTTIC
Trigger: ACATATTGTCGTCTTTACTCACTTTCCGTGGACAAT...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGGCTAAACAGGTCTTTTaGCCCTCTCTTGGGAATTTA +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMAKQVF*PSLGNL
Trigger: TAAATTCCCAAGAGAGGGTCAAAAGACCTGTTTAGC...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAAATTACCAGCTACAGTaGAGACACAGACAACACTTA +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPNYQLQ*RHRQHL
Trigger: TAAGTGTTGTCTGTGTCTTCACTGTAGCTGGTAATT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATTACAACAGTATTCCTaGCATGCCATCATATGTCAC +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPLQQYS*HAIICH
Trigger: GTGACATATGATGGCATGTCAGGAATACTGTTGTAA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCATTGTATGGTTGCACTaGAAGACCATGCATTTCAAT +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCIVWLH*KTMHFN
Trigger: ATTGAAATGCATGGTCTTTCAGTGCAACCATACAAT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATGTTTGGGTTTTTCTTaGGAAAGGGTTTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPCLGFS*ERVLLC
Trigger: ACAGAGCAAAACCCTTTCTCAAGAAAAACCCAAACA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCATGGTGTTGTTGTTTaGTCTGTAAAGAATGTGATT +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLHGVVV*SVKNVI
Trigger: AATCACATTCTTTACAGAGCAAACAACAACACCATG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR GCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTAAAAATTCTCACCACTaGACTGGCGAGATCATATGT +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFKNSHH*TGEIIC
Trigger: ACATATGATCTCGCCAGTGCAGTGGTGAGAATTTTT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAGGGTTTTCTAAACACTaGAGGTATGTAAGTATATAC +
Preference number: 4 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIGFSKH*RYVSIY
Trigger: GTATATACTTACATACCTGCAGTGTTTAGAAAACCC...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTCATACTCCACATGTGTaGGATGCATTAGGCACAAAT +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFHTPHV*DALGTN
Trigger: ATTTGTGCCTAATGCATCCCACACATGTGGAGTATG...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGTATATCACTTATGCATaGAAAAGAGTCGTCGAATAC +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLYITYA*KRVVEY
Trigger: GTATTCGACGACTCTTTTCCATGCATAAGTGATATA...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CCA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGAGAGATTTCCAGTTTTaGAACCATTCAAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLRDFQF*NHSSFL
Trigger: CAAGAAACTTGAATGGTTCCAAAACTGGAAATCTCT...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
3UTR CAA 72 bp GAAGAGGTCATCCAGACCTGGAGACAAGCTACTTTTTaGGTGAATAGAATATATTGCCATTGCTACTATTTA +
Preference number: 4 (lower is better)
Translates to: EEVIQTWRQATF*VNRIYCHCYYL
Trigger: TAAATAGTAGCAATGGCAATATATTCTATTCACCAAAAAAGTAGCTTGTCTCCAGGTCTGGATGACCTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTTTAAATAATTCATCTTaGTCACTTTGGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFLNNSS*SLWGPG
Trigger: TCCTGGACCCCAAAGTGATCAAGATGAATTATTTAA...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGTCCCACATAATGTGTaGTCTCTGTATGTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKVPHNV*SLYVLK
Trigger: TTTAAGAACATACAGAGATCACACATTATGTGGGAC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGACTCTAACTCATCCCTaGTCATACAGTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMTLTHP*SYSCCK
Trigger: CTTACAACAACTGTATGATCAGGGATGAGTTAGAGT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTAGTGCGTATGAATACTaGTTTCCCCAAGAATCATTA +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFSAYEY*FPQESL
Trigger: TAATGATTCTTGGGGAAAGCAGTATTCATACGCACT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCCTCATCAAAGATTTTaGCTTGGTATCTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFPHQRF*LGICVH
Trigger: ATGAACACAGATACCAAGGCAAAATCTTTGATGAGG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAATCAGCTGGTAACTTATaGAATGACATGTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKSAGNL*NDMYCS
Trigger: GGAACAATACATGTCATTCCATAAGTTACCAGCTGA...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGTGTTCAGATCCTTCTaGAACTTTTGCAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPVFRSF*NFCRRI
Trigger: AATTCTTCTGCAAAAGTTCCAGAAGGATCTGAACAC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGTACTGATATGTAAATaGTCTTGCAGCTTTCCCATA +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPVLICK*SCSFPI
Trigger: TATGGGAAAGCTGCAAGACCATTTACATATCAGTAC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCACCAAGAGTAAACTTTaGATGGTCCAGGATAAAATT +
Preference number: 4 (lower is better)
Translates to: QESLFASTHLNILCRKRCTKSKL*MVQDKI
Trigger: AATTTTATCCTGGACCATCCAAAGTTTACTCTTGGT...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTGTTACAGAAGGCAATaGACACATTGTACTGATGTG +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFCYRRQ*THCTDV
Trigger: CACATCAGTACAATGTGTCCATTGCCTTCTGTAACA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGGTTCCCAAACAGACGTaGTGCTGTATTGAATTTATT +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMVPKQT*CCIEFI
Trigger: AATAAATTCAATACAGCATCACGTCTGTTTGGGAAC...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTCCCATGGTACAGTATaGGTACTTTTTAAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMSHGTV*VLFKVG
Trigger: ACCTACTTTAAAAAGTACTCATACTGTACCATGGGA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTCTTTCAGAAGGTTTTTaGAATCCCTATTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFLSEGF*NPYFPL
Trigger: AAGTGGGAAATAGGGATTTCAAAAACCTTCTGAAAG...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR TCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTTGCCTCTACACATCTaGATATTCTCTGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMLPLHI*IFSVEN
Trigger: GTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCACATGGTGTTGTTGTTTaGTCTGTAAAGAATGTGATT +
Preference number: 4 (lower is better)
Translates to: FGIIGIISTKGITGSKDPHGVVV*SVKNVI
Trigger: AATCACATTCTTTACAGAGCAAACAACAACACCATG...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAACATGGTGTTGTTGTTTaGTCTGTAAAGAATGTGATT +
Preference number: 4 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKHGVVV*SVKNVI
Trigger: AATCACATTCTTTACAGAGCAAACAACAACACCATG...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR GCA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTATATGTAAATGGTCTTaGAGCTTTCCCATAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FGACVISPIEIKELASLFICKWS*SFPIGS
Trigger: AGAACCTATGGGAAAGCTGCAAGACCATTTACATAT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGGTGTTCAGATCCTTCTaGAACTTTTGCAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMVFRSF*NFCRRI
Trigger: AATTCTTCTGCAAAAGTTCCAGAAGGATCTGAACAC...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CCA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGCATGTTTCTTTCCCATaGTACAGTATGAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: NRALGLLYKPILFKAINMHVSFP*YSMSTF
Trigger: AAAAGTACTCATACTGTACCATGGGAAAGAAACATG...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCGCGGGGAAGACGCTGTaGCCATCGTCCCGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGAGKTL*PSSRLL
Trigger: TAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGC...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACCTGTCAAAGCCTGAATaGGAAGCAGGGTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHLSKPE*EAGSAL
Trigger: TAATGCTGACCCTGCTTCCAATTCAGGCTTTGACAG...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGAGCATTCCTCCCACTTaGGCCTCCCAAAGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWSIPPT*ASQSAR
Trigger: CCTAGCACTTTGGGAGGCCAAAGTGGGAGGAATGCT...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTCCACCGCCGTCCACCTaGAAGCACACGGAGTTGCCG +
Preference number: 5 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRPPPST*KHTELP
Trigger: CGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGG...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGGCAGTACGACGTCCTTaGGTCAGCAGGCAAATCTCT +
Preference number: 5 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWAVRRP*VSRQIS
Trigger: AGAGATTTGCCTGCTGACCAAAGGACGTCGTACTGC...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCAGCGCCTGCGTGCTCTaGTGCACTTCATTTTTCGGC +
Preference number: 5 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGSACVL*CTSFFG
Trigger: GCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCT...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGACCTCAAATCTCAACTaGCTCAGCATGGCAGTCACA +
Preference number: 5 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWTSNLN*LSMAVT
Trigger: TGTGACTGCCATGCTGAGCAAGTTGAGATTTGAGGT...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp CGTTCCGGGGACCGCCGTCACGGGTTGAGGGATGGAGGCCAGGGACTCGCCCACAAGATTCAAATTGTTTaGGCATCAGTCGGGAAATCA +
Preference number: 5 (lower is better)
Translates to: RSGDRRHGLRDGGQGLAHKIQIV*ASVGKS
Trigger: TGATTTCCCGACTGATGCCAAAACAATTTGAATCTT...GTGGGCGAGTCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTCCCCGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTAGCATTCCTCCCACTTaGGCCTCCCAAAGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVSIPPT*ASQSAR
Trigger: CCTAGCACTTTGGGAGGCCAAAGTGGGAGGAATGCT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTCCCGTCGCGGACGCCTaGGCGGGGAAGACGCTGTTG +
Preference number: 5 (lower is better)
Translates to: CIELPVFPISCALLNIHIPVADA*AGKTLL
Trigger: CAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGG...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGGCCTGGCCTGAGAACTaGCTTTATTTTAGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWAWPEN*LYFSQN
Trigger: ATTTTGGCTAAAATAAAGCAAGTTCTCAGGCCAGGC...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGCCATGCTATGTTGACTaGTCATCTCCAGAAATGTCT +
Preference number: 5 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWPCYVD*SSPEMS
Trigger: AGACATTTCTGGAGATGACAAGTCAACATAGCATGG...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGAGATCCCATGCTATGTaGACTTGTCATCTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWRSHAM*TCHLQK
Trigger: TTTCTGGAGATGACAAGTCAACATAGCATGGGATCT...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTTCCTCCAGGACCTCGTaGAAATTGTCCACGGAAAGT +
Preference number: 5 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVSSRTS*KLSTES
Trigger: ACTTTCCGTGGACAATTTCAACGAGGTCCTGGAGGA...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCCCGTCGCGGACGCCTaGGCGGGGAAGACGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLPVADA*AGKTLL
Trigger: CAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATACCCGTCGCGGACGCCTaGGCGGGGAAGACGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIPVADA*AGKTLL
Trigger: CAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGG...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp ATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCTGCTGTGGGTGGTTTGTCGTTGCTaGTGTTTATTTAATGTTCTC +
Preference number: 5 (lower is better)
Translates to: IFRRGAARCLWLRGRLLWVVCRC*CLFNVL
Trigger: GAGAACATTAAATAAACACAAGCAACGACAAACCAC...CCACAGCAGCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCTTGAAGCACACGGAGTaGCCGTGCTCCTTCGCGCCG +
Preference number: 5 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLKHTE*PCSFAP
Trigger: CGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAA...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTACCAGTTTCCGACAGTaGAAGTTGACTATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVTSFRQ*KLTISS
Trigger: AGAGGAGATAGTCAACTTCAACTGTCGGAAACTGGT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TGCACTTCATTTTTCGGCGTGGAGCTGCCAGGTGTCTGTGGCTGCGGGGACGGCGATATAATCTCCAGGTaGAAACACCTCAAATCTCAA +
Preference number: 5 (lower is better)
Translates to: CTSFFGVELPGVCGCGDGDIISR*KHLKSQ
Trigger: TTGAGATTTGAGGTGTTTCAACCTGGAGATTATATC...GCCGTCCCCGCAGCCACAGACACCTGGCAGCTCCACGCCGAAAAATGAAGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673735.1
CDS-3UTR CAA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTACCACCGCCGTCCACCTaGAAGCACACGGAGTTGCCG +
Preference number: 5 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLPPPST*KHTELP
Trigger: CGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGG...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATACCACCGCCGTCCACCTaGAAGCACACGGAGTTGCCG +
Preference number: 5 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIPPPST*KHTELP
Trigger: CGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGG...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTTCAGAACTGTCTTCATaGACAGTCCCAGTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVSELSS*TVPVLK
Trigger: TTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGA...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TCTTCCCTGGTTCTAACTAGCAAGTGCCAGGAGGCAGGCTGGGTTAGACAGCGTTGTATGTGCTACAATTaGGTGCATGCAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: SSLVLTSKCQEAGWVRQRCMCYN*VHAATT
Trigger: TGTGGTTGCTGCATGCACCAAATTGTAGCACATACA...ACGCTGTCTAACCCAGCCTGCCTCCTGGCACTTGCTAGTTAGAACCAGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTAGAAAGTCATTGCTTTaGAGGGGTAATAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVRKSLL*RGNSRC
Trigger: ACACCTGCTATTACCCCTCAAAAGCAATGACTTTCT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTAGATCCCATGCTATGTaGACTTGTCATCTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVRSHAM*TCHLQK
Trigger: TTTCTGGAGATGACAAGTCAACATAGCATGGGATCT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGACGAAGAGTTGGGCTaGCCGCCTCCTTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLDEELG*PPPSMP
Trigger: GGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTC...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCTGTTAGACGAAGAGTaGGGCTTGCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLLDEE*GLPPPS
Trigger: GGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATGCGGGGAAGACGCTGTaGCCATCGTCCCGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDAGKTL*PSSRLL
Trigger: TAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGC...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCGGGGAAGACGCTGTaGCCATCGTCCCGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLAGKTL*PSSRLL
Trigger: TAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGC...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATTGAAGCACACGGAGTaGCCGTGCTCCTTCGCGCCG +
Preference number: 5 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIILKHTE*PCSFAP
Trigger: CGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACCATGCTGACTGGGGCTaGGGCTCCATACCCAATGCA +
Preference number: 5 (lower is better)
Translates to: GKAKDSALLVIILLGDTDHADWG*GSIPNA
Trigger: TGCATTGGGTATGGAGCCCAAGCCCCAGTCAGCATG...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGACCGCCGTCACGGGTaGAGGGATGGAGGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKDRRHG*RDGGQG
Trigger: TCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTATTTACCGCAGCCAGTaGTTAGGAATCTTTCAATTG +
Preference number: 5 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVIYRSQ*LGIFQL
Trigger: CAATTGAAAGATTCCTAACAACTGGCTGCGGTAAAT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GCAAACCTAGGACCTTCCTTAGGACCCAGCATCCTCACAAGGCAGGGTGGGGTTATGTTCTTAAATGTATaGCCAGTGCCAGAGATACTG +
Preference number: 5 (lower is better)
Translates to: ANLGPSLGPSILTRQGGVMFLNV*PVPEIL
Trigger: CAGTATCTCTGGCACTGGCAATACATTTAAGAACAT...AACCCCACCCTGCCTTGTGAGGATGCTGGGTCCTAAGGAAGGTCCTAGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGCTCGGCTGCCCTCTGTaGGCCAGAAAGGGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLLGCPL*ARKGLS
Trigger: GGAGAGACCCTTTCTGGCCAACAGAGGGCAGCCGAG...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGACCGCCGTCACGGGTaGAGGGATGGAGGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFDRRHG*RDGGQG
Trigger: TCCCTGGCCTCCATCCCTCAACCCGTGACGGCGGTC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCCTTTGGAAACTCCAGTaGGCTGAGCCCTCTCAGGTC +
Preference number: 5 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSLWKLQ*AEPSQV
Trigger: GACCTGAGAGGGCTCAGCCAACTGGAGTTTCCAAAG...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTGACGAAGAGTTGGGCTaGCCGCCTCCTTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFDEELG*PPPSMP
Trigger: GGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTC...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATTGAAGCACACGGAGTaGCCGTGCTCCTTCGCGCCG +
Preference number: 5 (lower is better)
Translates to: FGIIGIISTKGITGSKDPLKHTE*PCSFAP
Trigger: CGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGGACGAAGAGTTGGGCTaGCCGCCTCCTTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: NRALGLLYKPILFKAINMDEELG*PPPSMP
Trigger: GGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTC...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCCTGTTAGACGAAGAGTaGGGCTTGCCGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: QESLFASTHLNILCRKRCLLDEE*GLPPPS
Trigger: GGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAG...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGACATGCTGCCCTGGTaGGTCTCCAATTCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: QESLFASTHLNILCRKRCDMLPW*VSNSWP
Trigger: AGGCCAGGAATTGGAGACCAACCAGGGCAGCATGTC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTGTTCTCTCGCTTTCCTaGTCTAGCCAAGATCCCATG +
Preference number: 5 (lower is better)
Translates to: CIELPVFPISCALLNIHIVLSLS*SSQDPM
Trigger: CATGGGATCTTGGCTAGACAAGGAAAGCGAGAGAAC...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCATGCTGACTGGGGCTaGGGCTCCATACCCAATGCA +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFHADWG*GSIPNA
Trigger: TGCATTGGGTATGGAGCCCAAGCCCCAGTCAGCATG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTGTACACCGGTGGAGATaGTGTCCTCATGCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFVHRWR*CPHAGG
Trigger: ACCTCCCGCATGAGGACACAATCTCCACCGGTGTAC...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGTACACCGGTGGAGATaGTGTCCTCATGCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKVHRWR*CPHAGG
Trigger: ACCTCCCGCATGAGGACACAATCTCCACCGGTGTAC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGCCAAGATCCTGCCATaGCACTCCCACCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFAKILP*HSHLGD
Trigger: GTCACCCAGGTGGGAGTGCAATGGCAGGATCTTGGC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAACATGCTCGTTACTCTaGCTCTACTTCTGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLTCSLL*LYFCPA
Trigger: CGCTGGGCAGAAGTAGAGCAAGAGTAACGAGCATGT...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTTGCTTATACTTCTCTaGATACTGCCGCCTCGAAGA +
Preference number: 5 (lower is better)
Translates to: GKAKDSALLVIILLGDTDLLILL*ILPPRR
Trigger: TCTTCGAGGCGGCAGTATCAAGAGAAGTATAAGCAA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTACCAGTTTCCGACAGTaGAAGTTGACTATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: CIELPVFPISCALLNIHITSFRQ*KLTISS
Trigger: AGAGGAGATAGTCAACTTCAACTGTCGGAAACTGGT...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTAGCGCCTGCGTGCTCTaGTGCACTTCATTTTTCGGC +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFSACVL*CTSFFG
Trigger: GCCGAAAAATGAAGTGCACAAGAGCACGCAGGCGCT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCTGAGGAAGATTCTCTaGGAAGAGCAGCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFLRKIL*EEQLLV
Trigger: CACCAGCAGCTGCTCTTCCAAGAGAATCTTCCTCAG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACTCATTTAAAACCCACTaGTGTGGGGAGGTTCTATCA +
Preference number: 5 (lower is better)
Translates to: GKAKDSALLVIILLGDTDSFKTH*CGEVLS
Trigger: TGATAGAACCTCCCCACACAAGTGGGTTTTAAATGA...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGACACTCCAGCTGCATaGAACTGCCAGTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKDTPAA*NCQCSQ
Trigger: TTGGGAACACTGGCAGTTCAATGCAGCTGGAGTGTC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTCTAGCTCTTATCTTCTaGTACCCCTTCCCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFLALIF*YPFPAA
Trigger: TGCGGCAGGGAAGGGGTACAAGAAGATAAGAGCTAG...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCACTAGCTCTTATCTTCTaGTACCCCTTCCCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: FGIIGIISTKGITGSKDPLALIF*YPFPAA
Trigger: TGCGGCAGGGAAGGGGTACAAGAAGATAAGAGCTAG...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAAGCTGATGCAGGAGAATaGCTTAAACCTGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKADAGE*LKPGRL
Trigger: CAGCCTCCCAGGTTTAAGCAATTCTCCTGCATCAGC...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTGCTGATGCAGGAGAATaGCTTAAACCTGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFADAGE*LKPGRL
Trigger: CAGCCTCCCAGGTTTAAGCAATTCTCCTGCATCAGC...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTTCCTCATCAAAGATTTaGCCTTGGTATCTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: CIELPVFPISCALLNIHISSSKI*PWYLCS
Trigger: TGAACACAGATACCAAGGCAAAATCTTTGATGAGGA...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATATTCCGACAGTTGAAGTaGACTATCTCCTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIFRQLK*TISSLR
Trigger: TCTGAGAGAGGAGATAGTCAACTTCAACTGTCGGAA...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGCAGTACGACGTCCTTaGGTCAGCAGGCAAATCTCT +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFAVRRP*VSRQIS
Trigger: AGAGATTTGCCTGCTGACCAAAGGACGTCGTACTGC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGCTGAGGAAGATTCTCTaGGAAGAGCAGCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: NRALGLLYKPILFKAINMLRKIL*EEQLLV
Trigger: CACCAGCAGCTGCTCTTCCAAGAGAATCTTCCTCAG...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGTATTTCTTTCTGCTTaGACAATCAGCAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: GKAKDSALLVIILLGDTDVFLSA*TISRDH
Trigger: ATGATCCCTGCTGATTGTCAAAGCAGAAAGAAATAC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGGACACTCCAGCTGCATaGAACTGCCAGTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: NRALGLLYKPILFKAINMDTPAA*NCQCSQ
Trigger: TTGGGAACACTGGCAGTTCAATGCAGCTGGAGTGTC...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAGTTCTCTCGCTTTCCTaGTCTAGCCAAGATCCCATG +
Preference number: 5 (lower is better)
Translates to: FGIIGIISTKGITGSKDPVLSLS*SSQDPM
Trigger: CATGGGATCTTGGCTAGACAAGGAAAGCGAGAGAAC...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCAGAACCTATATAGTTTaGCAGTTAAGAGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSRTYIV*QLRALA
Trigger: AGCCAGTGCTCTTAACTGCAAAACTATATAGGTTCT...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGAGAAGCCAAAGGACATaGGTGGTAAGGAGTATACTC +
Preference number: 5 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLRSQRT*VVRSIL
Trigger: GAGTATACTCCTTACCACCAATGTCCTTTGGCTTCT...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp GGTAAGGCCAAGGACTCTGCACTTCTTGTAATTATACTTCTGGGTGATACTGACGTATCTGATGCCACATaGAAAATAATCCATGGTGTT +
Preference number: 5 (lower is better)
Translates to: GKAKDSALLVIILLGDTDVSDAT*KIIHGV
Trigger: AACACCATGGATTATTTTCAATGTGGCATCAGATAC...GTCAGTATCACCCAGAAGTATAATTACAAGAAGTGCAGAGTCCTTGGCCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCATCAGAACTGTCTTCATaGACAGTCCCAGTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: KMSLTSTYKNTATASQKSSELSS*TVPVLK
Trigger: TTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGA...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTCCTCCAGGACCTCGTaGAAATTGTCCACGGAAAGT +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFSSRTS*KLSTES
Trigger: ACTTTCCGTGGACAATTTCAACGAGGTCCTGGAGGA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp GGGTTAGACAGCGTGACCAAGAGTAAACTTTGGATGGTCCAGGATAAAATTATAATTCAGGGTTGTCATTaGAGGATAATTGATGGGAGC +
Preference number: 5 (lower is better)
Translates to: GLDSVTKSKLWMVQDKIIIQGCH*RIIDGS
Trigger: GCTCCCATCAATTATCCTCAAATGACAACCCTGAAT...TATAATTTTATCCTGGACCATCCAAAGTTTACTCTTGGTCACGCTGTCTAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TGCATTGAACTGCCAGTGTTCCCAATCAGCTGTGCTCTGTTAAACATCCACATTCAGTTCCTTAAATTTTaGGCCATTGTTTTCAGGACT +
Preference number: 5 (lower is better)
Translates to: CIELPVFPISCALLNIHIQFLKF*AIVFRT
Trigger: AGTCCTGAAAACAATGGCCAAAAATTTAAGGAACTG...AATGTGGATGTTTAACAGAGCACAGCTGATTGGGAACACTGGCAGTTCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCATACTATTCAACTCTGTaGTATTGCATGGCCCACAGT +
Preference number: 5 (lower is better)
Translates to: KMSLTSTYKNTATASQKSYYSTL*YCMAHS
Trigger: ACTGTGGGCCATGCAATACAACAGAGTTGAATAGTA...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp CAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTAGCTCCTCTGAATTTTTATaGCAAAAGCTCACAGAGCTA +
Preference number: 5 (lower is better)
Translates to: QWQLPDFTHYFPKFAEFSSSEFL*QKLTEL
Trigger: TAGCTCTGTGAGCTTTTGCAATAAAAATTCAGAGGA...GCTAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTACCTCAAATCTCAACTaGCTCAGCATGGCAGTCACA +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFTSNLN*LSMAVT
Trigger: TGTGACTGCCATGCTGAGCAAGTTGAGATTTGAGGT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCAAGTCATGCTCTTAACTaGGGTTATTTACCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: FGIIGIISTKGITGSKDPSHALN*GYLPQP
Trigger: TGGCTGCGGTAAATAACCCAAGTTAAGAGCATGACT...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGTATTATAGGTATTATATCCACAAAAGGCATAACAGGCAGCAAGGATCCATGTATGTGCTACAATTaGGTGCATGCAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: FGIIGIISTKGITGSKDPCMCYN*VHAATT
Trigger: TGTGGTTGCTGCATGCACCAAATTGTAGCACATACA...TGGATCCTTGCTGCCTGTTATGCCTTTTGTGGATATAATACCTATAATACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTCTGTCAAAGCCTGAATaGGAAGCAGGGTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFLSKPE*EAGSAL
Trigger: TAATGCTGACCCTGCTTCCAATTCAGGCTTTGACAG...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTAAAGAATGTTCACCTTaGCCACTCTTTGGAGCGTGT +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFKECSP*PLFGAC
Trigger: ACACGCTCCAAAGAGTGGCAAAGGTGAACATTCTTT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTACATTCTACAAGTCTTTaGGACTCTTACGCTTATGCA +
Preference number: 5 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLHSTSL*DSYAYA
Trigger: TGCATAAGCGTAAGAGTCCAAAAGACTTGTAGAATG...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp GAATTTGTTACCCTTGTGATAGGTTATGAAATAGCAGTCTGGCTTGGATCACTGTTAGCATTAGCCAGCTaGATACTAAAACACCCAGAA +
Preference number: 5 (lower is better)
Translates to: EFVTLVIGYEIAVWLGSLLALAS*ILKHPE
Trigger: TTCTGGGTGTTTTAGTATCAAGCTGGCTAATGCTAA...CAGTGATCCAAGCCAGACTGCTATTTCATAACCTATCACAAGGGTAACAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp AAAATGTCACTGACAAGCACATACAAAAACACTGCTACCGCCTCACAGAAATCAGTATCTGATGCCACATaGAAAATAATCCATGGTGTT +
Preference number: 5 (lower is better)
Translates to: KMSLTSTYKNTATASQKSVSDAT*KIIHGV
Trigger: AACACCATGGATTATTTTCAATGTGGCATCAGATAC...TGATTTCTGTGAGGCGGTAGCAGTGTTTTTGTATGTGCTTGTCAGTGACATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTTCAGAACTGTCTTCATaGACAGTCCCAGTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFSELSS*TVPVLK
Trigger: TTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGA...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTTGCTTATACTTCTCTaGATACTGCCGCCTCGAAGA +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFLLILL*ILPPRR
Trigger: TCTTCGAGGCGGCAGTATCAAGAGAAGTATAAGCAA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTATTCAGGGTTGTCATTaGAGGATAATTGATGGGAGC +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFIQGCH*RIIDGS
Trigger: GCTCCCATCAATTATCCTCAAATGACAACCCTGAAT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp CAAGAAAGTCTCTTTGCCTCTACACATCTGAATATTCTCTGTAGAAAACGATGCGTATTTCTTTCTGCTTaGACAATCAGCAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: QESLFASTHLNILCRKRCVFLSA*TISRDH
Trigger: ATGATCCCTGCTGATTGTCAAAGCAGAAAGAAATAC...GCATCGTTTTCTACAGAGAATATTCAGATGTGTAGAGGCAAAGAGACTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGAGTCATGCTCTTAACTaGGGTTATTTACCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: NRALGLLYKPILFKAINMSHALN*GYLPQP
Trigger: TGGCTGCGGTAAATAACCCAAGTTAAGAGCATGACT...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATTACTATTTATCCTCCTaGTTTTCAGGAATGCTTCAC +
Preference number: 5 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDYYLSS*FSGMLH
Trigger: GTGAAGCATTCCTGAAAACAAGGAGGATAAATAGTA...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTGCCTGGCCTGAGAACTaGCTTTATTTTAGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFAWPEN*LYFSQN
Trigger: ATTTTGGCTAAAATAAAGCAAGTTCTCAGGCCAGGC...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTAAAGAATGTTCACCTTaGCCACTCTTTGGAGCGTGT +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFKECSP*PLFGAC
Trigger: ACACGCTCCAAAGAGTGGCAAAGGTGAACATTCTTT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TATGTTGACTTGTCATCTCCAGAAATGTCTTCACACTTGGAAGTTCCCTTAAAACCATGCTATGTTGACTaGTCATCTCCAGAAATGTCT +
Preference number: 5 (lower is better)
Translates to: YVDLSSPEMSSHLEVPLKPCYVD*SSPEMS
Trigger: AGACATTTCTGGAGATGACAAGTCAACATAGCATGG...TTTTAAGGGAACTTCCAAGTGTGAAGACATTTCTGGAGATGACAAGTCAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp CAGTTGTTAGGAATCTTTCAATTGTGTTCCAGTCATACTCCACATGTGTGGGATGTGGTTTGTCGTTGCTaGTGTTTATTTAATGTTCTC +
Preference number: 5 (lower is better)
Translates to: QLLGIFQLCSSHTPHVWDVVCRC*CLFNVL
Trigger: GAGAACATTAAATAAACACAAGCAACGACAAACCAC...ATCCCACACATGTGGAGTATGACTGGAACACAATTGAAAGATTCCTAACAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AACAGTGGCAGCTTCCAGACTTCACACATTACTTCCCCAAATTTGCTGAATTTATTACACATTGCACAGTaGTTCATTGTAAAACAGCCA +
Preference number: 5 (lower is better)
Translates to: NSGSFQTSHITSPNLLNLLHIAQ*FIVKQP
Trigger: TGGCTGTTTTACAATGAACAACTGTGCAATGTGTAA...TAAATTCAGCAAATTTGGGGAAGTAATGTGTGAAGTCTGGAAGCTGCCACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634658.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTATTTACCGCAGCCAGTaGTTAGGAATCTTTCAATTG +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFIYRSQ*LGIFQL
Trigger: CAATTGAAAGATTCCTAACAACTGGCTGCGGTAAAT...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTCATTTAAAACCCACTaGTGTGGGGAGGTTCTATCA +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFSFKTH*CGEVLS
Trigger: TGATAGAACCTCCCCACACAAGTGGGTTTTAAATGA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTAGAAAGTCATTGCTTTaGAGGGGTAATAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFRKSLL*RGNSRC
Trigger: ACACCTGCTATTACCCCTCAAAAGCAATGACTTTCT...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTAAAACTCCATACATACGGGCTTCACTATGTACAGAGAAAAGAGGTCACTTTTTGCTTAAGAAAGTCATaGCTTTTGAGGGGTAATAGC +
Preference number: 5 (lower is better)
Translates to: LKLHTYGLHYVQRKEVTFCLRKS*LLRGNS
Trigger: GCTATTACCCCTCAAAAGCAATGACTTTCTTAAGCA...AAAAGTGACCTCTTTTCTCTGTACATAGTGAAGCCCGTATGTATGGAGTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS GCA 90 bp ACTGTATCTGATGCCACATTGAAAATAATCCATGGTGTTGTTGTTTaGTCTGTAAAGAATGTGATTCCAACTGGTATGATGACTAGATTT +
Preference number: 5 (lower is better)
Translates to: TVSDATLKIIHGVVV*SVKNVIPTGMMTRF
Trigger: AAATCTAGTCATCATACCAGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTGGCATCAGATACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGTATCTGATGCCACATaGAAAATAATCCATGGTGTT +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFVSDAT*KIIHGV
Trigger: AACACCATGGATTATTTTCAATGTGGCATCAGATAC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTGATATAATCTCCAGGTaGAAACACCTCAAATCTCAA +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFDIISR*KHLKSQ
Trigger: TTGAGATTTGAGGTGTTTCAACCTGGAGATTATATC...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp AATAGGGCCTTGGGCCTACTATACAAACCTATTTTGTTTAAGGCTATAAATATGTTAGGAATCTTTCAATaGTGTTCCAGTCATACTCCA +
Preference number: 5 (lower is better)
Translates to: NRALGLLYKPILFKAINMLGIFQ*CSSHTP
Trigger: TGGAGTATGACTGGAACACAATTGAAAGATTCCTAA...CATATTTATAGCCTTAAACAAAATAGGTTTGTATAGTAGGCCCAAGGCCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS-3UTR CAA 90 bp TTTGGAGCGTGTGTGATATCTCCAATAGAAATTAAAGAACTGGCTTCACTTTTTTACTATTTATCCTCCTaGTTTTCAGGAATGCTTCAC +
Preference number: 5 (lower is better)
Translates to: FGACVISPIEIKELASLFYYLSS*FSGMLH
Trigger: GTGAAGCATTCCTGAAAACAAGGAGGATAAATAGTA...AAAAAGTGAAGCCAGTTCTTTAATTTCTATTGGAGATATCACACACGCTCCAAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000673735.1
CDS CAA 90 bp TCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCACCGCCGTCCACCTaGAAGCACACGGAGTTGCCGTGCTCCTTCGCGCCGGCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: SPPPPPPPPPPPPST*KHTELPCSFAPAPP
Trigger: CGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CCA 72 bp CGGCCGCGGCCGGCCCCGCGCCCGTCGCGGACGCCTTaGCGGGGAAGACGCTGTTGCCATCGTCCCGGCTGT +
Preference number: 6 (lower is better)
Translates to: RPRPAPRPSRTP*RGRRCCHRPGC
Trigger: ACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCGGGGCCGGCCGCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 72 bp TCGGCCGCGGCCGGCCCCGCGCCCGTCGCGGACGCCTaGGCGGGGAAGACGCTGTTGCCATCGTCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: SAAAGPAPVADA*AGKTLLPSSRL
Trigger: CAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCGGGGCCGGCCGCGGCCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS TCA 72 bp CGCCGCCGCCGCCACCGCCGCCACCGCCGTCCACCTTaGAGCACACGGAGTTGCCGTGCTCCTTCGCGCCGG +
Preference number: 6 (lower is better)
Translates to: RRRRHRRHRRPP*STRSCRAPSRR
Trigger: CCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGGCGGCGGTGGCGGCGGCGGCG
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS GCA 72 bp CGCCTGGCTCCCGCCGCCGCCGCTGCCCTTAGTGGCTaGGGTCCGGGCTCCGGTGCGGCTGGTGCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: RLAPAAAAALSG*GPGSGAAGAEA
Trigger: AGCTTCAGCACCAGCCGCACCGGAGCCCGGACCGCAGCCACTAAGGGCAGCGGCGGCGGCGGGAGCCAGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 72 bp CCGCCGCCGCCGCCACCGCCGCCACCGCCGTCCACCTaGAAGCACACGGAGTTGCCGTGCTCCTTCGCGCCG +
Preference number: 6 (lower is better)
Translates to: PPPPPPPPPPST*KHTELPCSFAP
Trigger: CGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGGCGGCGGTGGCGGCGGCGGCGG
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 90 bp AGGCGCTTCTCGGCCGCGGCCGGCCCCGCGCCCGTCGCGGACGCCTaGGCGGGGAAGACGCTGTTGCCATCGTCCCGGCTGTTAGACGAA +
Preference number: 6 (lower is better)
Translates to: RRFSAAAGPAPVADA*AGKTLLPSSRLLDE
Trigger: TTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCGGGGCCGGCCGCGGCCGAGAAGCGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 90 bp GCCGGCCCCGCGCCCGTCGCGGACGCCTTGGCGGGGAAGACGCTGTaGCCATCGTCCCGGCTGTTAGACGAAGAGTTGGGCTTGCCGCCT +
Preference number: 6 (lower is better)
Translates to: AGPAPVADALAGKTL*PSSRLLDEELGLPP
Trigger: AGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCGGGGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 90 bp AAGACGCTGTTGCCATCGTCCCGGCTGTTAGACGAAGAGTTGGGCTaGCCGCCTCCTTCCATGCCCGGAGGACGCGGCCGGCGACGGCGC +
Preference number: 6 (lower is better)
Translates to: KTLLPSSRLLDEELG*PPPSMPGGRGRRRR
Trigger: GCGCCGTCGCCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 90 bp GCGGGGAAGACGCTGTTGCCATCGTCCCGGCTGTTAGACGAAGAGTaGGGCTTGCCGCCTCCTTCCATGCCCGGAGGACGCGGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: AGKTLLPSSRLLDEE*GLPPPSMPGGRGRR
Trigger: TCGCCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 72 bp GCGCCCGTCGCGGACGCCTTGGCGGGGAAGACGCTGTaGCCATCGTCCCGGCTGTTAGACGAAGAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: APVADALAGKTL*PSSRLLDEELG
Trigger: GCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 72 bp TTGCCATCGTCCCGGCTGTTAGACGAAGAGTTGGGCTaGCCGCCTCCTTCCATGCCCGGAGGACGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: LPSSRLLDEELG*PPPSMPGGRGR
Trigger: CCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 72 bp ACGCTGTTGCCATCGTCCCGGCTGTTAGACGAAGAGTaGGGCTTGCCGCCTCCTTCCATGCCCGGAGGACGC +
Preference number: 6 (lower is better)
Translates to: TLLPSSRLLDEE*GLPPPSMPGGR
Trigger: GCGTCCTCCGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 72 bp ACTTTGGGGTCCAGGATGATTTCAGAACTGTCTTCATaGACAGTCCCAGTCCTAAAATTCATGATCAGGTCC +
Preference number: 6 (lower is better)
Translates to: TLGSRMISELSS*TVPVLKFMIRS
Trigger: GGACCTGATCATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 72 bp GCAAATAAAGGCATTGTAGCCACCAGTTTCCGACAGTaGAAGTTGACTATCTCCTCTCTCAGAGGATCATTG +
Preference number: 6 (lower is better)
Translates to: ANKGIVATSFRQ*KLTISSLRGSL
Trigger: CAATGATCCTCTGAGAGAGGAGATAGTCAACTTCAACTGTCGGAAACTGGTGGCTACAATGCCTTTATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000637305.1
ENST00000673735.1
CDS CCA 72 bp TTGAATTTTTCTTTCCTATTCGATCTAGTCGGTCAATaGCAACTGTCTCAAAGGCTCTCCTCATCATTGGAT +
Preference number: 6 (lower is better)
Translates to: LNFSFLFDLVGQ*QLSQRLSSSLD
Trigger: ATCCAATGATGAGGAGAGCCTTTGAGACAGTTGCCATTGACCGACTAGATCGAATAGGAAAGAAAAATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303230.6
ENST00000637305.1
CDS GCA 72 bp GATGCCACATTGAAAATAATCCATGGTGTTGTTGTTTaGTCTGTAAAGAATGTGATTCCAACTGGTATGATG +
Preference number: 6 (lower is better)
Translates to: DATLKIIHGVVV*SVKNVIPTGMM
Trigger: CATCATACCAGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTGGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1
CDS CAA 90 bp AAATTCATGATCAGGTCCAATAGGAAAACTGTATCTGATGCCACATaGAAAATAATCCATGGTGTTGTTGTTTGCTCTGTAAAGAATGTG +
Preference number: 6 (lower is better)
Translates to: KFMIRSNRKTVSDAT*KIIHGVVVCSVKNV
Trigger: CACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTGGCATCAGATACAGTTTTCCTATTGGACCTGATCATGAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303230.6
ENST00000634658.1
ENST00000673735.1