Pregenerated sensors for HCG27 (Homo sapiens)
Ensembl gene IDs: ENSG00000206344, ENSG00000220890, ENSG00000223577Ensembl transcript IDs: ENST00000383331.4, ENST00000407772.3, ENST00000413992.1, ENST00000414008.3, ENST00000415276.2, ENST00000416551.1, ENST00000416945.2, ENST00000420467.1, ENST00000420800.1, ENST00000424675.1, ENST00000430277.1, ENST00000430914.1, ENST00000432497.1, ENST00000436256.2, ENST00000446297.1, ENST00000449665.1, ENST00000452180.1, ENST00000452334.1, ENST00000458660.1, ENST00000638546.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATCCCAGTCAGTGGGGAGAGGACAGGTAATTCAGGGAAGGGGACCTaGATAGAGCTCACCCATAGGATATGGCAGGTCCCAGAACTCTAC | + |
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Preference number: 5 (lower is better) Translates to: IPVSGERTGNSGKGT*IELTHRIWQVPELY Trigger: GTAGAGTTCTGGGACCTGCCATATCCTATGGGTGAGCTCTATCCAGGTCCCCTTCCCTGAATTACCTGTCCTCTCCCCACTGACTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414008.3 |
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| CDS TCA 90 bp | TTCCTGCCTGGCAGACAGCTGCCTTCTTGCCATATCCTCACGTGGTaGAGAGAGTGGGAGCTCCAGTCTCTTCTTTTTCTTAAAAGGACA | + |
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Preference number: 5 (lower is better) Translates to: FLPGRQLPSCHILTW*REWELQSLLFLKRT Trigger: TGTCCTTTTAAGAAAAAGAAGAGACTGGAGCTCCCACTCTCTTCACCACGTGAGGATATGGCAAGAAGGCAGCTGTCTGCCAGGCAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414008.3 |
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| CDS CCA 90 bp | GGCCCCAACCTCTCAACCTCTTCTGAATCTAATCACTTCCCAAGATaGCCACCAGTCTCAAGGAGTTTACTGTCACAGTGGGAGCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: GPNLSTSSESNHFPR*PPVSRSLLSQWEQR Trigger: TCTTTGCTCCCACTGTGACAGTAAACTCCTTGAGACTGGTGGCCATCTTGGGAAGTGATTAGATTCAGAAGAGGTTGAGAGGTTGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414008.3 |
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| CDS TCA 90 bp | CCTGAGAGGATTCAGGGTGGGCTGCTCCTAAGGATGAGACAGCATTaGTCACTGCTGGAGAAACTCCCTTTATGGGAGTCTTACATGATT | + |
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Preference number: 5 (lower is better) Translates to: PERIQGGLLLRMRQH*SLLEKLPLWESYMI Trigger: AATCATGTAAGACTCCCATAAAGGGAGTTTCTCCAGCAGTGATCAATGCTGTCTCATCCTTAGGAGCAGCCCACCCTGAATCCTCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000383331.4 ENST00000407772.3 ENST00000416551.1 ENST00000416945.2 ENST00000452334.1 ENST00000638546.1 |
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| CDS TCA 90 bp | AGCATTGATCACTGCTGGAGAAACTCCCTTTATGGGAGTCTTACATaGTTATTCACAGGAGGTGGGTGGGAAGAGGTGTTACTAGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: SIDHCWRNSLYGSLT*LFTGGGWEEVLLAS Trigger: GCTTGCTAGTAACACCTCTTCCCACCCACCTCCTGTGAATAATCATGTAAGACTCCCATAAAGGGAGTTTCTCCAGCAGTGATCAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000383331.4 ENST00000416551.1 ENST00000416945.2 ENST00000452334.1 ENST00000638546.1 |
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| CDS TCA 90 bp | AGCATTGATCACTGCTGGAGAAACTCCCTTTATGGGAGTCTTACATaGTTATTTACAGGAGGTGGGTGGGAAGAGGTGTTACTAGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: SIDHCWRNSLYGSLT*LFTGGGWEEVLLAS Trigger: GCTTGCTAGTAACACCTCTTCCCACCCACCTCCTGTAAATAATCATGTAAGACTCCCATAAAGGGAGTTTCTCCAGCAGTGATCAATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407772.3 |
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| CDS CCA 90 bp | CAGAATTCCTTAATACTGGGTCCGAGACTAGAAAGTGGGAGTTACTaGTTTGGTTTTGGCACTTGTTTAGTCAGCTTGTGCTGCCATAAC | + |
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Preference number: 5 (lower is better) Translates to: QNSLILGPRLESGSY*FGFGTCLVSLCCHN Trigger: GTTATGGCAGCACAAGCTGACTAAACAAGTGCCAAAACCAAACCAGTAACTCCCACTTTCTAGTCTCGGACCCAGTATTAAGGAATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414008.3 |
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| CDS CCA 72 bp | GGGCCCTTGGGTTCTGGGGCAGATGCCGGCAGGGTCTaGATGAGATGCCCCCAACCTCAACCCTGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GPLGSGADAGRV*MRCPQPQPWSS Trigger: AGAGGACCAGGGTTGAGGTTGGGGGCATCTCATCCAGACCCTGCCGGCATCTGCCCCAGAACCCAAGGGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 19 transcripts: ENST00000383331.4 ENST00000407772.3 ENST00000413992.1 ENST00000415276.2 ENST00000416551.1 ENST00000416945.2 ENST00000420467.1 ENST00000420800.1 ENST00000424675.1 ENST00000430277.1 ENST00000430914.1 ENST00000432497.1 ENST00000436256.2 ENST00000446297.1 ENST00000449665.1 ENST00000452180.1 ENST00000452334.1 ENST00000458660.1 ENST00000638546.1 |
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| CDS TCA 72 bp | CCTTGGGTTCTGGGGCAGATGCCGGCAGGGTCTGGATaGGATGCCCCCAACCTCAACCCTGGTCCTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PWVLGQMPAGSG*DAPNLNPGPLK Trigger: TTTCAGAGGACCAGGGTTGAGGTTGGGGGCATCTCATCCAGACCCTGCCGGCATCTGCCCCAGAACCCAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 19 transcripts: ENST00000383331.4 ENST00000407772.3 ENST00000413992.1 ENST00000415276.2 ENST00000416551.1 ENST00000416945.2 ENST00000420467.1 ENST00000420800.1 ENST00000424675.1 ENST00000430277.1 ENST00000430914.1 ENST00000432497.1 ENST00000436256.2 ENST00000446297.1 ENST00000449665.1 ENST00000452180.1 ENST00000452334.1 ENST00000458660.1 ENST00000638546.1 |
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| CDS CCA 72 bp | GGTGGGTGGGAAGAGGTGTTACTAGCAAGCATGTTCTaGGCGGTCTTCTGGGTGCACGTGTGCAGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GGWEEVLLASMF*AVFWVHVCSSC Trigger: ACAGCTACTGCACACGTGCACCCAGAAGACCGCCCAGAACATGCTTGCTAGTAACACCTCTTCCCACCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000383331.4 ENST00000407772.3 ENST00000416551.1 ENST00000416945.2 ENST00000436256.2 ENST00000452334.1 ENST00000638546.1 |
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| CDS CCA 72 bp | AGTGGGGAGAGGACAGGTAATTCAGGGAAGGGGACCTaGATAGAGCTCACCCATAGGATATGGCAGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SGERTGNSGKGT*IELTHRIWQVP Trigger: TGGGACCTGCCATATCCTATGGGTGAGCTCTATCCAGGTCCCCTTCCCTGAATTACCTGTCCTCTCCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414008.3 |
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| CDS GCA 72 bp | GCAAGCATGTTCTGGGCGGTCTTCTGGGTGCACGTGTaGAGTAGCTGTACATGCTTGTTCATACGTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: ASMFWAVFWVHV*SSCTCLFIRLM Trigger: CATGAGACGTATGAACAAGCATGTACAGCTACTGCACACGTGCACCCAGAAGACCGCCCAGAACATGCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407772.3 |
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| CDS TCA 72 bp | GGCAGACAGCTGCCTTCTTGCCATATCCTCACGTGGTaGAGAGAGTGGGAGCTCCAGTCTCTTCTTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GRQLPSCHILTW*REWELQSLLFL Trigger: AAGAAAAAGAAGAGACTGGAGCTCCCACTCTCTTCACCACGTGAGGATATGGCAAGAAGGCAGCTGTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414008.3 |
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| CDS TCA 72 bp | ATTCAGGGTGGGCTGCTCCTAAGGATGAGACAGCATTaGTCACTGCTGGAGAAACTCCCTTTATGGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IQGGLLLRMRQH*SLLEKLPLWGS Trigger: AGACCCCCATAAAGGGAGTTTCTCCAGCAGTGATCAATGCTGTCTCATCCTTAGGAGCAGCCCACCCTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436256.2 |
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| CDS TCA 72 bp | CACTGCTGGAGAAACTCCCTTTATGGGGGTCTTACATaGTTATTCACAGGAGGTGGGTGGGAAGAGGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: HCWRNSLYGGLT*LFTGGGWEEVL Trigger: TAACACCTCTTCCCACCCACCTCCTGTGAATAATCATGTAAGACCCCCATAAAGGGAGTTTCTCCAGCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436256.2 |
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| CDS CCA 72 bp | ACTGGGTCCGAGACTAGAAAGTGGGAGTTACTGGTTTaGTTTTGGCACTTGTTTAGTCAGCTTGTGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TGSETRKWELLV*FWHLFSQLVLP Trigger: TGGCAGCACAAGCTGACTAAACAAGTGCCAAAACCAAACCAGTAACTCCCACTTTCTAGTCTCGGACCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414008.3 |
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| CDS TCA 72 bp | CACTGCTGGAGAAACTCCCTTTATGGGAGTCTTACATaGTTATTCACAGGAGGTGGGTGGGAAGAGGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: HCWRNSLYGSLT*LFTGGGWEEVL Trigger: TAACACCTCTTCCCACCCACCTCCTGTGAATAATCATGTAAGACTCCCATAAAGGGAGTTTCTCCAGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000383331.4 ENST00000416551.1 ENST00000416945.2 ENST00000452334.1 ENST00000638546.1 |
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| CDS CCA 72 bp | CCTTTATGGGGGTCTTACATGATTATTCACAGGAGGTaGGTGGGAAGAGGTGTTACTAGCAAGCATGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLWGSYMIIHRR*VGRGVTSKHVL Trigger: CAGAACATGCTTGCTAGTAACACCTCTTCCCACCCACCTCCTGTGAATAATCATGTAAGACCCCCATAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436256.2 |
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| CDS TCA 72 bp | CACTGCTGGAGAAACTCCCTTTATGGGAGTCTTACATaGTTATTTACAGGAGGTGGGTGGGAAGAGGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: HCWRNSLYGSLT*LFTGGGWEEVL Trigger: TAACACCTCTTCCCACCCACCTCCTGTAAATAATCATGTAAGACTCCCATAAAGGGAGTTTCTCCAGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407772.3 |
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| CDS CCA 72 bp | CCTTTATGGGAGTCTTACATGATTATTCACAGGAGGTaGGTGGGAAGAGGTGTTACTAGCAAGCATGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLWESYMIIHRR*VGRGVTSKHVL Trigger: CAGAACATGCTTGCTAGTAACACCTCTTCCCACCCACCTCCTGTGAATAATCATGTAAGACTCCCATAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000383331.4 ENST00000416551.1 ENST00000416945.2 ENST00000452334.1 ENST00000638546.1 |
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| CDS CCA 72 bp | CCTTTATGGGAGTCTTACATGATTATTTACAGGAGGTaGGTGGGAAGAGGTGTTACTAGCAAGCATGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLWESYMIIYRR*VGRGVTSKHVL Trigger: CAGAACATGCTTGCTAGTAACACCTCTTCCCACCCACCTCCTGTAAATAATCATGTAAGACTCCCATAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407772.3 |
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| CDS TCA 72 bp | ATTTTGAAAGTTAAGTGCAAAATAAACTGTACACCCTaGGAGGATTCAGGGTGGGCTGCTCCTAAGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: ILKVKCKINCTP*EDSGWAAPKDE Trigger: CTCATCCTTAGGAGCAGCCCACCCTGAATCCTCTCAGGGTGTACAGTTTATTTTGCACTTAACTTTCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000383331.4 ENST00000407772.3 ENST00000416551.1 ENST00000416945.2 ENST00000436256.2 ENST00000452334.1 ENST00000638546.1 |
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