Pregenerated sensors for HCG25 (Homo sapiens)
Ensembl gene IDs: ENSG00000224096, ENSG00000232940, ENSG00000238064Ensembl transcript IDs: ENST00000420003.5, ENST00000422366.5, ENST00000422493.5, ENST00000425404.5, ENST00000425999.5, ENST00000427196.1, ENST00000427541.5, ENST00000427938.5, ENST00000431605.1, ENST00000435652.1, ENST00000436369.5, ENST00000438683.5, ENST00000438875.5, ENST00000440216.5, ENST00000444679.1, ENST00000448338.1, ENST00000448868.1, ENST00000450514.5, ENST00000450532.5, ENST00000452295.5, ENST00000455964.1, ENST00000658980.1, ENST00000662241.1, ENST00000666260.1, ENST00000669650.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGTGGGTCTGTGACTGCCGAGCACACCCGCCGCGGAGCGGAGGCTaGTGCTTCCTGAGGCTGAGAGTGGATCCGGCTCCGGGCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: EWVCDCRAHPPRSGG*CFLRLRVDPAPGSP Trigger: AGGAGAGCCCGGAGCCGGATCCACTCTCAGCCTCAGGAAGCAGCAGCCTCCGCTCCGCGGCGGGTGTGCTCGGCAGTCACAGACCCACTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427938.5 ENST00000440216.5 ENST00000450514.5 ENST00000450532.5 ENST00000666260.1 ENST00000669650.1 |
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| CDS GCA 90 bp | TGGAGAGTGGTGGAAAGCGGTTCCTCCCCGCTTAGGCCCTTCGGATaGAGGTCTAGCCCGTCGGCAACGGGAGGTGTCCTGAGTGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: WRVVESGSSPLRPFG*RSSPSATGGVLSGS Trigger: AGACCCACTCAGGACACCTCCCGTTGCCGACGGGCTAGACCTGCATCCGAAGGGCCTAAGCGGGGAGGAACCGCTTTCCACCACTCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS CCA 90 bp | GCAGGGCTAGACCAGGCGAAATTCGTACCATCCGTTTGTTTGACTTaGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCGTTTGAACTTA | + |
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Preference number: 5 (lower is better) Translates to: AGLDQAKFVPSVCLT*SLPAVLAYTPRLNL Trigger: TAAGTTCAAACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGTACGAATTTCGCCTGGTCTAGCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS TCA 90 bp | CTTGGGGAGAACTTAGTGGAGTTGAAGATCAGCCAGATCCCTCTCTaGCACTGTTTCCTCCTGCTATTAGCCCGGGTAACTCAGCTGATC | + |
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Preference number: 5 (lower is better) Translates to: LGENLVELKISQIPL*HCFLLLLARVTQLI Trigger: GATCAGCTGAGTTACCCGGGCTAATAGCAGGAGGAAACAGTGTCAGAGAGGGATCTGGCTGATCTTCAACTCCACTAAGTTCTCCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 25 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427196.1 ENST00000427541.5 ENST00000427938.5 ENST00000431605.1 ENST00000435652.1 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000440216.5 ENST00000444679.1 ENST00000448338.1 ENST00000448868.1 ENST00000450514.5 ENST00000450532.5 ENST00000452295.5 ENST00000455964.1 ENST00000658980.1 ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS TCA 90 bp | TTCTCCTTCCTCCTGAAGGTTTTTCAGGTGGCCCCATCTCTAGAATaGCCTTTCCTTTCTGACTACTTCCTGGGCTTACATCCCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FSFLLKVFQVAPSLE*PFLSDYFLGLHPFW Trigger: CCAGAAGGGATGTAAGCCCAGGAAGTAGTCAGAAAGGAAAGGTCATTCTAGAGATGGGGCCACCTGAAAAACCTTCAGGAGGAAGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS CCA 90 bp | ATCTCTGAGTCAGGATGTAATGCGGAGTTTCACCAACTTCAGAAATaGCACCAGTATCATTCAGGTGACCTGCCTTCACTCCCAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: ISESGCNAEFHQLQK*HQYHSGDLPSLPAP Trigger: AGGTGCTGGGAGTGAAGGCAGGTCACCTGAATGATACTGGTGCCATTTCTGAAGTTGGTGAAACTCCGCATTACATCCTGACTCAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427541.5 ENST00000427938.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000440216.5 ENST00000450514.5 ENST00000450532.5 ENST00000452295.5 ENST00000662241.1 |
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| CDS CCA 90 bp | GAGAATACCAGAAAAGAGGGTTTGATGATAAGGATGGCTATACCTTaGGGAGAACTTAGTGGAGTTGAAGATCAGCCAGATCCCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ENTRKEGLMIRMAIP*GELSGVEDQPDPSL Trigger: CAGAGAGGGATCTGGCTGATCTTCAACTCCACTAAGTTCTCCCCAAGGTATAGCCATCCTTATCATCAAACCCTCTTTTCTGGTATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000427541.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000452295.5 ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CCA 90 bp | GATTTTGCTGACTGCATTCCATGGTGTGGCCAAACTTCCTCTGTCTaGTGTATTTCTCATAAGTGTGTAATTAGATGGAAAGGCTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: DFADCIPWCGQTSSV*CISHKCVIRWKGLV Trigger: GACCAAGCCTTTCCATCTAATTACACACTTATGAGAAATACACCAGACAGAGGAAGTTTGGCCACACCATGGAATGCAGTCAGCAAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS TCA 90 bp | GGATGCAGATTACATGGTGGGGGAATAGAGTATGAAAGACTGGATTaGGAGAATACCAGAAAAGAGGGTTTGATGATAAGGATGGCTATA | + |
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Preference number: 5 (lower is better) Translates to: GCRLHGGGIEYERLD*ENTRKEGLMIRMAI Trigger: TATAGCCATCCTTATCATCAAACCCTCTTTTCTGGTATTCTCTCAATCCAGTCTTTCATACTCTATTCCCCCACCATGTAATCTGCATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000427541.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000452295.5 ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS GCA 90 bp | TTTCTCCATAGAGGATTTTCCTTAACTTTTGCAGCAGCTGAAAGATaGCATTCAGATGGATCTACATTAGTCATGATGCCAGAATTGGGC | + |
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Preference number: 5 (lower is better) Translates to: FLHRGFSLTFAAAER*HSDGSTLVMMPELG Trigger: GCCCAATTCTGGCATCATGACTAATGTAGATCCATCTGAATGGCATCTTTCAGCTGCTGCAAAAGTTAAGGAAAATCCTCTATGGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS GCA 90 bp | AGTCATTTGTCATCTAGAATGATGTACAGTTTAGATTTTGCTGACTaGATTCCATGGTGTGGCCAAACTTCCTCTGTCTGGTGTATTTCT | + |
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Preference number: 5 (lower is better) Translates to: SHLSSRMMYSLDFAD*IPWCGQTSSVWCIS Trigger: AGAAATACACCAGACAGAGGAAGTTTGGCCACACCATGGAATGCAGTCAGCAAAATCTAAACTGTACATCATTCTAGATGACAAATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS CCA 90 bp | TCATCTAGAATGATGTACAGTTTAGATTTTGCTGACTGCATTCCATaGTGTGGCCAAACTTCCTCTGTCTGGTGTATTTCTCATAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: SSRMMYSLDFADCIP*CGQTSSVWCISHKC Trigger: ACACTTATGAGAAATACACCAGACAGAGGAAGTTTGGCCACACCATGGAATGCAGTCAGCAAAATCTAAACTGTACATCATTCTAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS GCA 90 bp | TGTCTTCTTGGCTCTCTTTGTGATGTTAGTAGCCATCAATTTCAGTaGCTAGATACATTAATTAGATTTCTGTATCTCCTACTATCTCAA | + |
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Preference number: 5 (lower is better) Translates to: CLLGSLCDVSSHQFQ*LDTLIRFLYLLLSQ Trigger: TTGAGATAGTAGGAGATACAGAAATCTAATTAATGTATCTAGGCACTGAAATTGATGGCTACTAACATCACAAAGAGAGCCAAGAAGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS GCA 72 bp | GTCGGCAACGGGAGGTGTCCTGAGTGGGTCTGTGACTaGCGAGCACACCCGCCGCGGAGCGGAGGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VGNGRCPEWVCD*RAHPPRSGGCC Trigger: GCAGCAGCCTCCGCTCCGCGGCGGGTGTGCTCGGCAGTCACAGACCCACTCAGGACACCTCCCGTTGCCGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427938.5 ENST00000440216.5 ENST00000450514.5 ENST00000450532.5 ENST00000666260.1 ENST00000669650.1 |
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| CDS GCA 72 bp | TGTGACTGCCGAGCACACCCGCCGCGGAGCGGAGGCTaGTGCTTCCTGAGGCTGAGAGTGGATCCGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: CDCRAHPPRSGG*CFLRLRVDPAP Trigger: CGGAGCCGGATCCACTCTCAGCCTCAGGAAGCAGCAGCCTCCGCTCCGCGGCGGGTGTGCTCGGCAGTCACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427938.5 ENST00000440216.5 ENST00000450514.5 ENST00000450532.5 ENST00000666260.1 ENST00000669650.1 |
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| CDS GCA 72 bp | GTGGAAAGCGGTTCCTCCCCGCTTAGGCCCTTCGGATaGAGGTCTAGCCCGTCGGCAACGGGAGGTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VESGSSPLRPFG*RSSPSATGGVL Trigger: CAGGACACCTCCCGTTGCCGACGGGCTAGACCTGCATCCGAAGGGCCTAAGCGGGGAGGAACCGCTTTCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS CAA 90 bp | CACCGTTGGGGCAGGGCTAGACCAGGCGAAATTCGTACCATCCGTTaGTTTGACTTGGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: HRWGRARPGEIRTIR*FDLEPSCCPRLYAS Trigger: CGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGTACGAATTTCGCCTGGTCTAGCCCTGCCCCAACGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS CAA 72 bp | TGGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCGTTaGAACTTAGGCTCTAGACTGGAGAGACACGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: WSLPAVLAYTPR*NLGSRLERHGD Trigger: GTCCCCGTGTCTCTCCAGTCTAGAGCCTAAGTTCAAACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427196.1 ENST00000427541.5 ENST00000427938.5 ENST00000431605.1 ENST00000435652.1 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000440216.5 ENST00000444679.1 ENST00000448338.1 ENST00000448868.1 ENST00000450514.5 ENST00000450532.5 ENST00000452295.5 ENST00000455964.1 ENST00000658980.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 72 bp | CAAGACCACTTCCCTGTGGGCATCCGTTTGTTTGACTaGGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: QDHFPVGIRLFD*EPSCCPRLYAS Trigger: CGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGCCCACAGGGAAGTGGTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000427541.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000452295.5 ENST00000658980.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 90 bp | GTTGGGGCAGGGCTAGACCAGGCGAAATTCGTACCATCCGTTTGTTaGACTTGGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VGAGLDQAKFVPSVC*TWSLPAVLAYTPRL Trigger: CAAACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGTACGAATTTCGCCTGGTCTAGCCCTGCCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS CCA 72 bp | AAGACCACTTCCCTGTGGGCATCCGTTTGTTTGACTTaGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: KTTSLWASVCLT*SLPAVLAYTPR Trigger: ACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGCCCACAGGGAAGTGGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000427541.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000452295.5 ENST00000658980.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 72 bp | GGTTTCCCAAGACCACTTCCCATCCGTTTGTTTGACTaGGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GFPRPLPIRLFD*EPSCCPRLYAS Trigger: CGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGGAAGTGGTCTTGGGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427196.1 ENST00000427938.5 ENST00000431605.1 ENST00000435652.1 ENST00000440216.5 ENST00000444679.1 ENST00000448338.1 ENST00000448868.1 ENST00000450514.5 ENST00000450532.5 ENST00000455964.1 |
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| CDS CAA 72 bp | GGCAGGGCTAGACCAGGCGAAATTCGTACCATCCGTTaGTTTGACTTGGAGCCTTCCTGCTGTCCTCGCCTA | + |
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Preference number: 6 (lower is better) Translates to: GRARPGEIRTIR*FDLEPSCCPRL Trigger: TAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGTACGAATTTCGCCTGGTCTAGCCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS GCA 72 bp | CCTGTGGGCATCCGTTTGTTTGACTTGGAGCCTTCCTaGTGTCCTCGCCTATACGCCTCGTTTGAACTTAGG | + |
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Preference number: 6 (lower is better) Translates to: PVGIRLFDLEPS*CPRLYASFELR Trigger: CCTAAGTTCAAACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGCCCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000427541.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000452295.5 ENST00000658980.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CCA 72 bp | GTTTCCCAAGACCACTTCCCATCCGTTTGTTTGACTTaGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: VSQDHFPSVCLT*SLPAVLAYTPR Trigger: ACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGGAAGTGGTCTTGGGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427196.1 ENST00000427938.5 ENST00000431605.1 ENST00000435652.1 ENST00000440216.5 ENST00000444679.1 ENST00000448338.1 ENST00000448868.1 ENST00000450514.5 ENST00000450532.5 ENST00000455964.1 |
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| CDS CCA 72 bp | GACCAGGCGAAATTCGTACCATCCGTTTGTTTGACTTaGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: DQAKFVPSVCLT*SLPAVLAYTPR Trigger: ACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGTACGAATTTCGCCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS CAA 72 bp | AGACCAGGCGAAATTCGTACCATCCGTTTGTTTGACTaGGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RPGEIRTIRLFD*EPSCCPRLYAS Trigger: CGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGTACGAATTTCGCCTGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS CAA 72 bp | GGGCTAGACCAGGCGAAATTCGTACCATCCGTTTGTTaGACTTGGAGCCTTCCTGCTGTCCTCGCCTATACG | + |
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Preference number: 6 (lower is better) Translates to: GLDQAKFVPSVC*TWSLPAVLAYT Trigger: CGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGTACGAATTTCGCCTGGTCTAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS CAA 90 bp | TGTTTGACTTGGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCGTTaGAACTTAGGCTCTAGACTGGAGAGACACGGGGACCCCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: CLTWSLPAVLAYTPR*NLGSRLERHGDPFK Trigger: CTTAAAGGGGTCCCCGTGTCTCTCCAGTCTAGAGCCTAAGTTCAAACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 24 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427196.1 ENST00000427541.5 ENST00000427938.5 ENST00000431605.1 ENST00000435652.1 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000440216.5 ENST00000444679.1 ENST00000448338.1 ENST00000448868.1 ENST00000450514.5 ENST00000450532.5 ENST00000452295.5 ENST00000455964.1 ENST00000658980.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 90 bp | GGCAGGGCTAGACCAGGCGAAATTCGTACCATCCGTTTGTTTGACTaGGAGCCTTCCTGCTGTCCTCGCCTATACGCCTCGTTTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: GRARPGEIRTIRLFD*EPSCCPRLYASFEL Trigger: AAGTTCAAACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGTACGAATTTCGCCTGGTCTAGCCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662241.1 |
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| CDS GCA 72 bp | CCACTTCCCATCCGTTTGTTTGACTTGGAGCCTTCCTaGTGTCCTCGCCTATACGCCTCGTTTGAACTTAGG | + |
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Preference number: 6 (lower is better) Translates to: PLPIRLFDLEPS*CPRLYASFELR Trigger: CCTAAGTTCAAACGAGGCGTATAGGCGAGGACAGCAGGAAGGCTCCAAGTCAAACAAACGGATGGGAAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427196.1 ENST00000427938.5 ENST00000431605.1 ENST00000435652.1 ENST00000440216.5 ENST00000444679.1 ENST00000448338.1 ENST00000448868.1 ENST00000450514.5 ENST00000450532.5 ENST00000455964.1 |
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| CDS GCA 72 bp | AGCCACTGTGCCCGGCCTATCCTTAACTTTAGACATTaGACACAGTACAACTGCTATCCGTATCGGATAGTT | + |
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Preference number: 6 (lower is better) Translates to: SHCARPILNFRH*TQYNCYPYRIV Trigger: AACTATCCGATACGGATAGCAGTTGTACTGTGTGCAATGTCTAAAGTTAAGGATAGGCCGGGCACAGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CCA 72 bp | TCAGGATGTAATGCGGAGTTTCACCAACTTCAGAAATaGCACCAGTATCATTCAGGTGACCTGCCTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: SGCNAEFHQLQK*HQYHSGDLPSL Trigger: GAGTGAAGGCAGGTCACCTGAATGATACTGGTGCCATTTCTGAAGTTGGTGAAACTCCGCATTACATCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000422493.5 ENST00000425404.5 ENST00000425999.5 ENST00000427541.5 ENST00000427938.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000440216.5 ENST00000450514.5 ENST00000450532.5 ENST00000452295.5 ENST00000662241.1 |
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| CDS GCA 72 bp | TATCCGTATCGGATAGTTCTTAAGGTCAGCAGCTATTaGTTATTGTGTCTGCTGACTCTCTTGGTAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: YPYRIVLKVSSY*LLCLLTLLVAA Trigger: GGCAGCTACCAAGAGAGTCAGCAGACACAATAAGCAATAGCTGCTGACCTTAAGAACTATCCGATACGGATA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 72 bp | GTCAGCAGCTATTGCTTATTGTGTCTGCTGACTCTCTaGGTAGCTGCCCTTCTTTTGTGTCTAGTGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: VSSYCLLCLLTL*VAALLLCLVIF Trigger: AAAGATCACTAGACACAAAAGAAGGGCAGCTACCAAGAGAGTCAGCAGACACAATAAGCAATAGCTGCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 72 bp | TATCGGATAGTTCTTAAGGTCAGCAGCTATTGCTTATaGTGTCTGCTGACTCTCTTGGTAGCTGCCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: YRIVLKVSSYCL*CLLTLLVAALL Trigger: AAGAAGGGCAGCTACCAAGAGAGTCAGCAGACACAATAAGCAATAGCTGCTGACCTTAAGAACTATCCGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 90 bp | GAAAGATGCCATTCAGATGGATCTACATTAGTCATGATGCCAGAATaGGGCAAATCTGCTGACACCAGGACACCTGTGTATATGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: ERCHSDGSTLVMMPE*GKSADTRTPVYMCL Trigger: CAAACACATATACACAGGTGTCCTGGTGTCAGCAGATTTGCCCAATTCTGGCATCATGACTAATGTAGATCCATCTGAATGGCATCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CCA 72 bp | AGAAAAGAGGGTTTGATGATAAGGATGGCTATACCTTaGGGAGAACTTAGTGGAGTTGAAGATCAGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RKEGLMIRMAIP*GELSGVEDQPD Trigger: ATCTGGCTGATCTTCAACTCCACTAAGTTCTCCCCAAGGTATAGCCATCCTTATCATCAAACCCTCTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000427541.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000452295.5 ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 72 bp | TCACGGACAGTTTTGTTTCATCTATACCAACACCTATaGCTTATCCTCCTTCTGTGTCCCCCAGTTACTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRTVLFHLYQHL*LILLLCPPVTL Trigger: CAAAGTAACTGGGGGACACAGAAGGAGGATAAGCAATAGGTGTTGGTATAGATGAAACAAAACTGTCCGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS TCA 72 bp | CTTGGTAGCTGCCCTTCTTTTGTGTCTAGTGATCTTTaGGTTCATTGTTTGATCTTAACCAGGGGAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: LGSCPSFVSSDL*VHCLILTRGTV Trigger: TACAGTTCCCCTGGTTAAGATCAAACAATGAACTCAAAGATCACTAGACACAAAAGAAGGGCAGCTACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS TCA 72 bp | TTACATGGTGGGGGAATAGAGTATGAAAGACTGGATTaGGAGAATACCAGAAAAGAGGGTTTGATGATAAGG | + |
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Preference number: 6 (lower is better) Translates to: LHGGGIEYERLD*ENTRKEGLMIR Trigger: CCTTATCATCAAACCCTCTTTTCTGGTATTCTCTCAATCCAGTCTTTCATACTCTATTCCCCCACCATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000420003.5 ENST00000422366.5 ENST00000427541.5 ENST00000436369.5 ENST00000438683.5 ENST00000438875.5 ENST00000452295.5 ENST00000662241.1 ENST00000666260.1 ENST00000669650.1 |
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| CDS CAA 72 bp | GGTATGTATTTCCATCAGGAAGCACATAATGTCTTCTaGGCTCTCTTTGTGATGTTAGTAGCCATCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: GMYFHQEAHNVF*ALFVMLVAINF Trigger: GAAATTGATGGCTACTAACATCACAAAGAGAGCCAAGAAGACATTATGTGCTTCCTGATGGAAATACATACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS GCA 72 bp | GGCTCTCTTTGTGATGTTAGTAGCCATCAATTTCAGTaGCTAGATACATTAATTAGATTTCTGTATCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: GSLCDVSSHQFQ*LDTLIRFLYLL Trigger: TAGGAGATACAGAAATCTAATTAATGTATCTAGGCACTGAAATTGATGGCTACTAACATCACAAAGAGAGCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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| CDS GCA 72 bp | TCTCCTACTATCTCAAAATTTTCCATCTTCTGTCTGTaGTACATTCTGAGTCCTTTCTTCAGTTATAAATTC | + |
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Preference number: 6 (lower is better) Translates to: SPTISKFSIFCL*YILSPFFSYKF Trigger: GAATTTATAACTGAAGAAAGGACTCAGAATGTAGCACAGACAGAAGATGGAAAATTTTGAGATAGTAGGAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669650.1 |
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