Pregenerated sensors for HCG14 (Homo sapiens)
Ensembl gene IDs: ENSG00000237010Ensembl transcript IDs: ENST00000412400.1, ENST00000413667.1, ENST00000420516.1, ENST00000432275.1, ENST00000444715.1, ENST00000444986.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTGAACCTCTACCGTGTTTGCCAGGCACTGTTACCTGGACGGCATTaGTCTACACATGTTATTTTAGCGGTGTCGCTGGCCTCTAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LNLYRVCQALLPGRH*STHVILAVSLASRG Trigger: GCCCCTAGAGGCCAGCGACACCGCTAAAATAACATGTGTAGACCAATGCCGTCCAGGTAACAGTGCCTGGCAAACACGGTAGAGGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CCA 90 bp | TGGGGGAGGCTAACCACGATCAAGATTTCAGTAAACATCAGACACTaGAGAGCCGACCCAGCGACCGAAGAAGCAAAAGATCTTCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: WGRLTTIKISVNIRH*RADPATEEAKDLLS Trigger: GGAAAGAAGATCTTTTGCTTCTTCGGTCGCTGGGTCGGCTCTCCAGTGTCTGATGTTTACTGAAATCTTGATCGTGGTTAGCCTCCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CCA 90 bp | GAGCTCAGATTGCTTGGCGAAGGCATCTTCCAAACAATGAAGTCCTaGGGGAGGCTAACCACGATCAAGATTTCAGTAAACATCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: ELRLLGEGIFQTMKS*GRLTTIKISVNIRH Trigger: GTGTCTGATGTTTACTGAAATCTTGATCGTGGTTAGCCTCCCCCAGGACTTCATTGTTTGGAAGATGCCTTCGCCAAGCAATCTGAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CCA 90 bp | AATGTATTTATTGAACCTCTACCGTGTTTGCCAGGCACTGTTACCTaGACGGCATTGGTCTACACATGTTATTTTAGCGGTGTCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: NVFIEPLPCLPGTVT*TALVYTCYFSGVAG Trigger: GCCAGCGACACCGCTAAAATAACATGTGTAGACCAATGCCGTCCAGGTAACAGTGCCTGGCAAACACGGTAGAGGTTCAATAAATACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CAA 72 bp | TTTGTGACCTTGGGGCTTCCCGGCCTGGAGCTCAGATaGCTTGGCGAAGGCATCTTCCAAACAATGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FVTLGLPGLELR*LGEGIFQTMKS Trigger: GGACTTCATTGTTTGGAAGATGCCTTCGCCAAGCAATCTGAGCTCCAGGCCGGGAAGCCCCAAGGTCACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CCA 72 bp | TACCGTGTTTGCCAGGCACTGTTACCTGGACGGCATTaGTCTACACATGTTATTTTAGCGGTGTCGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: YRVCQALLPGRH*STHVILAVSLA Trigger: GGCCAGCGACACCGCTAAAATAACATGTGTAGACCAATGCCGTCCAGGTAACAGTGCCTGGCAAACACGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CAA 72 bp | CTACCGTGTTTGCCAGGCACTGTTACCTGGACGGCATaGGTCTACACATGTTATTTTAGCGGTGTCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LPCLPGTVTWTA*VYTCYFSGVAG Trigger: GCCAGCGACACCGCTAAAATAACATGTGTAGACCAATGCCGTCCAGGTAACAGTGCCTGGCAAACACGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CAA 72 bp | CTGTTTAGTTTCAGGGCTCCATTAAAATTTGTGACCTaGGGGCTTCCCGGCCTGGAGCTCAGATTGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LFSFRAPLKFVT*GLPGLELRLLG Trigger: GCCAAGCAATCTGAGCTCCAGGCCGGGAAGCCCCAAGGTCACAAATTTTAATGGAGCCCTGAAACTAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CCA 72 bp | TTGCTTGGCGAAGGCATCTTCCAAACAATGAAGTCCTaGGGGAGGCTAACCACGATCAAGATTTCAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: LLGEGIFQTMKS*GRLTTIKISVN Trigger: GTTTACTGAAATCTTGATCGTGGTTAGCCTCCCCCAGGACTTCATTGTTTGGAAGATGCCTTCGCCAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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| CDS CCA 72 bp | ATTGAACCTCTACCGTGTTTGCCAGGCACTGTTACCTaGACGGCATTGGTCTACACATGTTATTTTAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: IEPLPCLPGTVT*TALVYTCYFSG Trigger: ACCGCTAAAATAACATGTGTAGACCAATGCCGTCCAGGTAACAGTGCCTGGCAAACACGGTAGAGGTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412400.1 ENST00000413667.1 ENST00000420516.1 ENST00000432275.1 ENST00000444715.1 ENST00000444986.1 |
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