Pregenerated sensors for HCCAT5 (Homo sapiens)
Ensembl gene IDs: ENSG00000260880Ensembl transcript IDs: ENST00000569990.2, ENST00000642127.1, ENST00000647808.1, ENST00000659438.1, ENST00000662824.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCGGCGTTGACAGTCAGAGAGGAATTCCCAGGCATAAATGGCTTTaGCACGTGTGCCCACGCTGGCTCTGCCAAGCTCTGCATGCGCGT | + |
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Preference number: 5 (lower is better) Translates to: GGVDSQRGIPRHKWL*HVCPRWLCQALHAR Trigger: ACGCGCATGCAGAGCTTGGCAGAGCCAGCGTGGGCACACGTGGCAAAGCCATTTATGCCTGGGAATTCCTCTCTGACTGTCAACGCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 90 bp | GGCCGAGAAATGGCTGGGCTCCAGGCTTGTGTGACAGCCCGAGAGTaGACAGGGCGCAGCTATGACTCCATCTCTTCTTACAGGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: GREMAGLQACVTARE*TGRSYDSISSYRTW Trigger: CCAGGTCCTGTAAGAAGAGATGGAGTCATAGCTGCGCCCTGTCCACTCTCGGGCTGTCACACAAGCCTGGAGCCCAGCCATTTCTCGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS GCA 90 bp | GACAGTCAGAGAGGAATTCCCAGGCATAAATGGCTTTGCCACGTGTaGCCACGCTGGCTCTGCCAAGCTCTGCATGCGCGTGGTCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: DSQRGIPRHKWLCHV*PRWLCQALHARGRP Trigger: TGGACGACCACGCGCATGCAGAGCTTGGCAGAGCCAGCGTGGGCACACGTGGCAAAGCCATTTATGCCTGGGAATTCCTCTCTGACTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 90 bp | GGGGGTGGAGGTTGCTGGTGCAGAATTCACAACCAGCACCAGCCGTaGCAATGCCAGAGGATGACTGCAAGAAGTCCTTTGAAGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: GGGGCWCRIHNQHQP*QCQRMTARSPLKRR Trigger: CCGCCGCTTCAAAGGACTTCTTGCAGTCATCCTCTGGCATTGCCACGGCTGGTGCTGGTTGTGAATTCTGCACCAGCAACCTCCACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 90 bp | CAACGCCAGGTAGGACCGGATCATTCCCTTACCTCTGCATGCGCGTaGTCGTCCAGAGTTTCCCGAAAACCTCTGCTGGAGGTGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: QRQVGPDHSLTSACA*SSRVSRKPLLEVRA Trigger: AGCCCTCACCTCCAGCAGAGGTTTTCGGGAAACTCTGGACGACCACGCGCATGCAGAGGTAAGGGAATGATCCGGTCCTACCTGGCGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS GCA 90 bp | GGAAGTCAACGCCAGGTAGGACCGGATCATTCCCTTACCTCTGCATaGGCGTGGTCGTCCAGAGTTTCCCGAAAACCTCTGCTGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: GSQRQVGPDHSLTSA*AWSSRVSRKPLLEV Trigger: CACCTCCAGCAGAGGTTTTCGGGAAACTCTGGACGACCACGCGCATGCAGAGGTAAGGGAATGATCCGGTCCTACCTGGCGTTGACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS TCA 90 bp | GTGTCCCGGGAGTGGGAGCCCCAGACACGGCGTTCGCGCTCGGCTTaGTTCTATGAAGGCGTCTATTTGATGGAACGTACTGGAACAGTT | + |
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Preference number: 5 (lower is better) Translates to: VSREWEPQTRRSRSA*FYEGVYLMERTGTV Trigger: AACTGTTCCAGTACGTTCCATCAAATAGACGCCTTCATAGAATCAAGCCGAGCGCGAACGCCGTGTCTGGGGCTCCCACTCCCGGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS TCA 90 bp | CAAGATGAAGACAAGGCCGAGAAATGGCTGGGCTCCAGGCTTGTGTaGCAGCCCGAGAGTGGACAGGGCGCAGCTATGACTCCATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: QDEDKAEKWLGSRLV*QPESGQGAAMTPSL Trigger: AAGAGATGGAGTCATAGCTGCGCCCTGTCCACTCTCGGGCTGTCACACAAGCCTGGAGCCCAGCCATTTCTCGGCCTTGTCTTCATCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS GCA 90 bp | ACCTGGAAGTCAACGCCAGGTAGGACCGGATCATTCCCTTACCTCTaGATGCGCGTGGTCGTCCAGAGTTTCCCGAAAACCTCTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: TWKSTPGRTGSFPYL*MRVVVQSFPKTSAG Trigger: TCCAGCAGAGGTTTTCGGGAAACTCTGGACGACCACGCGCATGCAGAGGTAAGGGAATGATCCGGTCCTACCTGGCGTTGACTTCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS TCA 90 bp | TTCTCCGTGCTGTCTGTTTGCAGGAGACGACCGGTTAGCCCAAGATaGAGACAAGGCCGAGAAATGGCTGGGCTCCAGGCTTGTGTGACA | + |
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Preference number: 5 (lower is better) Translates to: FSVLSVCRRRPVSPR*RQGREMAGLQACVT Trigger: TGTCACACAAGCCTGGAGCCCAGCCATTTCTCGGCCTTGTCTTCATCTTGGGCTAACCGGTCGTCTCCTGCAAACAGACAGCACGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS GCA 90 bp | TTTCCTGTTTGCAGTGAGAATGAGGCCTTTCTCTCCCCGGCCCTTTaGTCTCCCCACAGTTGTCTCACGAGGTCACTTCCTGCTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: FPVCSENEAFLSPAL*SPHSCLTRSLPADR Trigger: CCTGTCAGCAGGAAGTGACCTCGTGAGACAACTGTGGGGAGAGCAAAGGGCCGGGGAGAGAAAGGCCTCATTCTCACTGCAAACAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS TCA 90 bp | TGCAACCCAAACACGATGTGCAAAGGGTGGCACGTGGCCTTTGAGTaGACCTGGAAGTCAACGCCAGGTAGGACCGGATCATTCCCTTAC | + |
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Preference number: 5 (lower is better) Translates to: CNPNTMCKGWHVAFE*TWKSTPGRTGSFPY Trigger: GTAAGGGAATGATCCGGTCCTACCTGGCGTTGACTTCCAGGTTCACTCAAAGGCCACGTGCCACCCTTTGCACATCGTGTTTGGGTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS GCA 90 bp | CAGAATTCACAACCAGCACCAGCCGTGGCAATGCCAGAGGATGACTaGAAGAAGTCCTTTGAAGCGGCGGCGTTGACAGTCAGAGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: QNSQPAPAVAMPEDD*KKSFEAAALTVREE Trigger: TTCCTCTCTGACTGTCAACGCCGCCGCTTCAAAGGACTTCTTGCAGTCATCCTCTGGCATTGCCACGGCTGGTGCTGGTTGTGAATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 90 bp | TCTTTCCCCTTTGCAACCCAAACACGATGTGCAAAGGGTGGCACGTaGCCTTTGAGTGAACCTGGAAGTCAACGCCAGGTAGGACCGGAT | + |
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Preference number: 5 (lower is better) Translates to: SFPFATQTRCAKGGT*PLSEPGSQRQVGPD Trigger: ATCCGGTCCTACCTGGCGTTGACTTCCAGGTTCACTCAAAGGCCACGTGCCACCCTTTGCACATCGTGTTTGGGTTGCAAAGGGGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CCA 90 bp | AGCTGTGGTTCTGCATCTGCCAGACTTTTTCAGGGTCGTCCCCTGTaGCTTTCAGACGTCTGTTGGCCTGGGCACACTTCTGGCTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SCGSASARLFQGRPL*LSDVCWPGHTSGFQ Trigger: TTGAAAGCCAGAAGTGTGCCCAGGCCAACAGACGTCTGAAAGCCACAGGGGACGACCCTGAAAAAGTCTGGCAGATGCAGAACCACAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS TCA 90 bp | GGCCCTTTGCTCTCCCCACAGTTGTCTCACGAGGTCACTTCCTGCTaGCAGGCTCCTTTCAGTGCAAGGTTTGGATGGAAACAATACTCC | + |
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Preference number: 5 (lower is better) Translates to: GPLLSPQLSHEVTSC*QAPFSARFGWKQYS Trigger: GGAGTATTGTTTCCATCCAAACCTTGCACTGAAAGGAGCCTGTCAGCAGGAAGTGACCTCGTGAGACAACTGTGGGGAGAGCAAAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS GCA 90 bp | AACTGTATTCTGTGGGGAGAGGCCGAGTTCACTCATCCTTCTCCGTaGTGTCTGTTTGCAGGAGACGACCGGTTAGCCCAAGATGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: NCILWGEAEFTHPSP*CLFAGDDRLAQDED Trigger: GTCTTCATCTTGGGCTAACCGGTCGTCTCCTGCAAACAGACAGCACGGAGAAGGATGAGTGAACTCGGCCTCTCCCCACAGAATACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS GCA 90 bp | GCAGCTTGTTTTATCAAGTCCAATGTAGGGGGTGGAGGTTGCTGGTaGAGAATTCACAACCAGCACCAGCCGTGGCAATGCCAGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: AACFIKSNVGGGGCW*RIHNQHQPWQCQRM Trigger: CATCCTCTGGCATTGCCACGGCTGGTGCTGGTTGTGAATTCTGCACCAGCAACCTCCACCCCCTACATTGGACTTGATAAAACAAGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 90 bp | CGAAGGGATACAGGTTGGCTTTTCTCTGCAACTAGCATGGGTGGCTaGGAAAACAGGAGCGCGTGGGACACACACAGCCTCTCAGATTTA | + |
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Preference number: 5 (lower is better) Translates to: RRDTGWLFSATSMGG*ENRSAWDTHSLSDL Trigger: TAAATCTGAGAGGCTGTGTGTGTCCCACGCGCTCCTGTTTTCCCAGCCACCCATGCTAGTTGCAGAGAAAAGCCAACCTGTATCCCTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000569990.2 ENST00000642127.1 ENST00000647808.1 |
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| CDS CCA 90 bp | GAAGCAGCTTGTTTTATCAAGTCCAATGTAGGGGGTGGAGGTTGCTaGTGCAGAATTCACAACCAGCACCAGCCGTGGCAATGCCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: EAACFIKSNVGGGGC*CRIHNQHQPWQCQR Trigger: CCTCTGGCATTGCCACGGCTGGTGCTGGTTGTGAATTCTGCACCAGCAACCTCCACCCCCTACATTGGACTTGATAAAACAAGCTGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 90 bp | TCTCTCCAGGAAGGGCACACAGAGCATAAACGAAGGGATACAGGTTaGCTTTTCTCTGCAACTAGCATGGGTGGCTGGGAAAACAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SLQEGHTEHKRRDTG*LFSATSMGGWENRS Trigger: GCTCCTGTTTTCCCAGCCACCCATGCTAGTTGCAGAGAAAAGCCAACCTGTATCCCTTCGTTTATGCTCTGTGTGCCCTTCCTGGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000569990.2 ENST00000642127.1 ENST00000647808.1 |
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| CDS CCA 90 bp | GCATACCTGAGAAGCAGCTTGTTTTATCAAGTCCAATGTAGGGGGTaGAGGTTGCTGGTGCAGAATTCACAACCAGCACCAGCCGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: AYLRSSLFYQVQCRG*RLLVQNSQPAPAVA Trigger: TGCCACGGCTGGTGCTGGTTGTGAATTCTGCACCAGCAACCTCCACCCCCTACATTGGACTTGATAAAACAAGCTGCTTCTCAGGTATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 90 bp | TCGTCCCCTGTGGCTTTCAGACGTCTGTTGGCCTGGGCACACTTCTaGCTTTCAATATGCATCTTTCCCCTTTGCAACCCAAACACGATG | + |
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Preference number: 5 (lower is better) Translates to: SSPVAFRRLLAWAHF*LSICIFPLCNPNTM Trigger: CATCGTGTTTGGGTTGCAAAGGGGAAAGATGCATATTGAAAGCCAGAAGTGTGCCCAGGCCAACAGACGTCTGAAAGCCACAGGGGACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS TCA 90 bp | AGACACGGCGTTCGCGCTCGGCTTGATTCTATGAAGGCGTCTATTTaGTGGAACGTACTGGAACAGTTCATAGCCAGCCCAGCAAACCTT | + |
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Preference number: 5 (lower is better) Translates to: RHGVRARLDSMKASI*WNVLEQFIASPANL Trigger: AAGGTTTGCTGGGCTGGCTATGAACTGTTCCAGTACGTTCCATCAAATAGACGCCTTCATAGAATCAAGCCGAGCGCGAACGCCGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS GCA 90 bp | ACAGTTGTCTCACGAGGTCACTTCCTGCTGACAGGCTCCTTTCAGTaGAAGGTTTGGATGGAAACAATACTCCGTTTTCTGGGGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: TVVSRGHFLLTGSFQ*KVWMETILRFLGDW Trigger: CCAGTCCCCCAGAAAACGGAGTATTGTTTCCATCCAAACCTTGCACTGAAAGGAGCCTGTCAGCAGGAAGTGACCTCGTGAGACAACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS GCA 90 bp | GCTTTCAGACGTCTGTTGGCCTGGGCACACTTCTGGCTTTCAATATaGATCTTTCCCCTTTGCAACCCAAACACGATGTGCAAAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: AFRRLLAWAHFWLSI*IFPLCNPNTMCKGW Trigger: CCACCCTTTGCACATCGTGTTTGGGTTGCAAAGGGGAAAGATGCATATTGAAAGCCAGAAGTGTGCCCAGGCCAACAGACGTCTGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CCA 90 bp | AATGTCCTGTATTTAATCAGCGCTGTAATGGCGAACTGTATTCTGTaGGGAGAGGCCGAGTTCACTCATCCTTCTCCGTGCTGTCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: NVLYLISAVMANCIL*GEAEFTHPSPCCLF Trigger: AAACAGACAGCACGGAGAAGGATGAGTGAACTCGGCCTCTCCCCACAGAATACAGTTCGCCATTACAGCGCTGATTAAATACAGGACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS GCA 90 bp | GGGAGGGGACAGACAACCATGTTAAACAATCAACTATGCAGTTATTaGATTAATTACAGTCACATGGCTGTTATGAAGAGAAGGTTTACA | + |
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Preference number: 5 (lower is better) Translates to: GRGQTTMLNNQLCSY*INYSHMAVMKRRFT Trigger: TGTAAACCTTCTCTTCATAACAGCCATGTGACTGTAATTAATGCAATAACTGCATAGTTGATTGTTTAACATGGTTGTCTGTCCCCTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647808.1 |
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| CDS GCA 72 bp | AAGTTTTCAGCCAGGAGCAGGGCCAGGACTCACCCGTaGCATGCCGGCTACATCCCTGCTAGAGCTAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: KFSARSRARTHP*HAGYIPARAKL Trigger: CAGCTTAGCTCTAGCAGGGATGTAGCCGGCATGGCACGGGTGAGTCCTGGCCCTGCTCCTGGCTGAAAACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647808.1 |
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| CDS GCA 72 bp | CTGTGGGGAGAGGCCGAGTTCACTCATCCTTCTCCGTaGTGTCTGTTTGCAGGAGACGACCGGTTAGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: LWGEAEFTHPSP*CLFAGDDRLAQ Trigger: TTGGGCTAACCGGTCGTCTCCTGCAAACAGACAGCACGGAGAAGGATGAGTGAACTCGGCCTCTCCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS GCA 72 bp | AGAGGAATTCCCAGGCATAAATGGCTTTGCCACGTGTaGCCACGCTGGCTCTGCCAAGCTCTGCATGCGCGT | + |
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Preference number: 6 (lower is better) Translates to: RGIPRHKWLCHV*PRWLCQALHAR Trigger: ACGCGCATGCAGAGCTTGGCAGAGCCAGCGTGGGCACACGTGGCAAAGCCATTTATGCCTGGGAATTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS GCA 72 bp | CAACCAGCACCAGCCGTGGCAATGCCAGAGGATGACTaGAAGAAGTCCTTTGAAGCGGCGGCGTTGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: QPAPAVAMPEDD*KKSFEAAALTV Trigger: GACTGTCAACGCCGCCGCTTCAAAGGACTTCTTGCAGTCATCCTCTGGCATTGCCACGGCTGGTGCTGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS GCA 72 bp | CGCCAGGTAGGACCGGATCATTCCCTTACCTCTGCATaGGCGTGGTCGTCCAGAGTTTCCCGAAAACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RQVGPDHSLTSA*AWSSRVSRKPL Trigger: CAGAGGTTTTCGGGAAACTCTGGACGACCACGCGCATGCAGAGGTAAGGGAATGATCCGGTCCTACCTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CCA 72 bp | ATGGCTGGGCTCCAGGCTTGTGTGACAGCCCGAGAGTaGACAGGGCGCAGCTATGACTCCATCTCTTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: MAGLQACVTARE*TGRSYDSISSY Trigger: GTAAGAAGAGATGGAGTCATAGCTGCGCCCTGTCCACTCTCGGGCTGTCACACAAGCCTGGAGCCCAGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS TCA 72 bp | CTGTCTGTTTGCAGGAGACGACCGGTTAGCCCAAGATaGAGACAAGGCCGAGAAATGGCTGGGCTCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSVCRRRPVSPR*RQGREMAGLQA Trigger: AGCCTGGAGCCCAGCCATTTCTCGGCCTTGTCTTCATCTTGGGCTAACCGGTCGTCTCCTGCAAACAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS GCA 72 bp | TGCAGTGAGAATGAGGCCTTTCTCTCCCCGGCCCTTTaGTCTCCCCACAGTTGTCTCACGAGGTCACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSENEAFLSPAL*SPHSCLTRSLP Trigger: AGGAAGTGACCTCGTGAGACAACTGTGGGGAGAGCAAAGGGCCGGGGAGAGAAAGGCCTCATTCTCACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS GCA 72 bp | GACAGTCAGAGAGGAATTCCCAGGCATAAATGGCTTTaGCACGTGTGCCCACGCTGGCTCTGCCAAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: DSQRGIPRHKWL*HVCPRWLCQAL Trigger: CAGAGCTTGGCAGAGCCAGCGTGGGCACACGTGGCAAAGCCATTTATGCCTGGGAATTCCTCTCTGACTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS GCA 72 bp | TCAACGCCAGGTAGGACCGGATCATTCCCTTACCTCTaGATGCGCGTGGTCGTCCAGAGTTTCCCGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: STPGRTGSFPYL*MRVVVQSFPKT Trigger: GGTTTTCGGGAAACTCTGGACGACCACGCGCATGCAGAGGTAAGGGAATGATCCGGTCCTACCTGGCGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CCA 72 bp | ACAGGTTGGCTTTTCTCTGCAACTAGCATGGGTGGCTaGGAAAACAGGAGCGCGTGGGACACACACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TGWLFSATSMGG*ENRSAWDTHSL Trigger: GAGGCTGTGTGTGTCCCACGCGCTCCTGTTTTCCCAGCCACCCATGCTAGTTGCAGAGAAAAGCCAACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000569990.2 ENST00000642127.1 ENST00000647808.1 |
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| CDS CCA 72 bp | GGCGTTGACAGTCAGAGAGGAATTCCCAGGCATAAATaGCTTTGCCACGTGTGCCCACGCTGGCTCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: GVDSQRGIPRHK*LCHVCPRWLCQ Trigger: TTGGCAGAGCCAGCGTGGGCACACGTGGCAAAGCCATTTATGCCTGGGAATTCCTCTCTGACTGTCAACGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 72 bp | GTAGGACCGGATCATTCCCTTACCTCTGCATGCGCGTaGTCGTCCAGAGTTTCCCGAAAACCTCTGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: VGPDHSLTSACA*SSRVSRKPLLE Trigger: CTCCAGCAGAGGTTTTCGGGAAACTCTGGACGACCACGCGCATGCAGAGGTAAGGGAATGATCCGGTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CAA 72 bp | ACCCAAACACGATGTGCAAAGGGTGGCACGTGGCCTTaGAGTGAACCTGGAAGTCAACGCCAGGTAGGACCG | + |
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Preference number: 6 (lower is better) Translates to: TQTRCAKGGTWP*SEPGSQRQVGP Trigger: CGGTCCTACCTGGCGTTGACTTCCAGGTTCACTCAAAGGCCACGTGCCACCCTTTGCACATCGTGTTTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CAA 90 bp | CCCTTTGCAACCCAAACACGATGTGCAAAGGGTGGCACGTGGCCTTaGAGTGAACCTGGAAGTCAACGCCAGGTAGGACCGGATCATTCC | + |
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Preference number: 6 (lower is better) Translates to: PFATQTRCAKGGTWP*SEPGSQRQVGPDHS Trigger: GGAATGATCCGGTCCTACCTGGCGTTGACTTCCAGGTTCACTCAAAGGCCACGTGCCACCCTTTGCACATCGTGTTTGGGTTGCAAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS TCA 72 bp | GAGTGGGAGCCCCAGACACGGCGTTCGCGCTCGGCTTaGTTCTATGAAGGCGTCTATTTGATGGAACGTACT | + |
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Preference number: 6 (lower is better) Translates to: EWEPQTRRSRSA*FYEGVYLMERT Trigger: AGTACGTTCCATCAAATAGACGCCTTCATAGAATCAAGCCGAGCGCGAACGCCGTGTCTGGGGCTCCCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS TCA 72 bp | AACACGATGTGCAAAGGGTGGCACGTGGCCTTTGAGTaGACCTGGAAGTCAACGCCAGGTAGGACCGGATCA | + |
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Preference number: 6 (lower is better) Translates to: NTMCKGWHVAFE*TWKSTPGRTGS Trigger: TGATCCGGTCCTACCTGGCGTTGACTTCCAGGTTCACTCAAAGGCCACGTGCCACCCTTTGCACATCGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS GCA 72 bp | GGCCCTCAAACGGACCAAAGTGATCAGCTGTGGTTCTaGATCTGCCAGACTTTTTCAGGGTCGTCCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GPQTDQSDQLWF*ICQTFSGSSPV Trigger: CACAGGGGACGACCCTGAAAAAGTCTGGCAGATGCAGAACCACAGCTGATCACTTTGGTCCGTTTGAGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CCA 72 bp | AGTGCAAGGTTTGGATGGAAACAATACTCCGTTTTCTaGGGGACTGGTGAGGCTCTGGGCCTCACCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SARFGWKQYSVF*GTGEALGLTRL Trigger: CAGCCTGGTGAGGCCCAGAGCCTCACCAGTCCCCCAGAAAACGGAGTATTGTTTCCATCCAAACCTTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS CCA 72 bp | GCAACTAGCATGGGTGGCTGGGAAAACAGGAGCGCGTaGGACACACACAGCCTCTCAGATTTACTGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ATSMGGWENRSA*DTHSLSDLLLS Trigger: GGACAACAGTAAATCTGAGAGGCTGTGTGTGTCCCACGCGCTCCTGTTTTCCCAGCCACCCATGCTAGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569990.2 ENST00000642127.1 ENST00000647808.1 |
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| CDS CCA 72 bp | GGGTCGTCCCCTGTGGCTTTCAGACGTCTGTTGGCCTaGGCACACTTCTGGCTTTCAATATGCATCTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GSSPVAFRRLLA*AHFWLSICIFP Trigger: GGGAAAGATGCATATTGAAAGCCAGAAGTGTGCCCAGGCCAACAGACGTCTGAAAGCCACAGGGGACGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS TCA 72 bp | GCCCCAGACACGGCGTTCGCGCTCGGCTTGATTCTATaGAGGCGTCTATTTGATGGAACGTACTGGAACAGT | + |
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Preference number: 6 (lower is better) Translates to: APDTAFALGLIL*RRLFDGTYWNS Trigger: ACTGTTCCAGTACGTTCCATCAAATAGACGCCTTCATAGAATCAAGCCGAGCGCGAACGCCGTGTCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS GCA 72 bp | TGGTGCAGAATTCACAACCAGCACCAGCCGTGGCAATaGCAGAGGATGACTGCAAGAAGTCCTTTGAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: WCRIHNQHQPWQ*QRMTARSPLKR Trigger: CCGCTTCAAAGGACTTCTTGCAGTCATCCTCTGGCATTGCCACGGCTGGTGCTGGTTGTGAATTCTGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 72 bp | GGTTGCTGGTGCAGAATTCACAACCAGCACCAGCCGTaGCAATGCCAGAGGATGACTGCAAGAAGTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: GCWCRIHNQHQP*QCQRMTARSPL Trigger: CAAAGGACTTCTTGCAGTCATCCTCTGGCATTGCCACGGCTGGTGCTGGTTGTGAATTCTGCACCAGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CCA 72 bp | GAAAGGGGCCCTCAAACGGACCAAAGTGATCAGCTGTaGTTCTGCATCTGCCAGACTTTTTCAGGGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: ERGPQTDQSDQL*FCICQTFSGSS Trigger: GGACGACCCTGAAAAAGTCTGGCAGATGCAGAACCACAGCTGATCACTTTGGTCCGTTTGAGGGCCCCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CCA 72 bp | GGCTGTTATGAAGAGAAGGTTTACAGGACCAGCCCCTaGACTGGAGTCAGGGTAGGGGTTCTTAGAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GCYEEKVYRTSP*TGVRVGVLREG Trigger: GCCTTCTCTAAGAACCCCTACCCTGACTCCAGTCCAGGGGCTGGTCCTGTAAACCTTCTCTTCATAACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647808.1 |
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| CDS CAA 90 bp | CTCACGAGGTCACTTCCTGCTGACAGGCTCCTTTCAGTGCAAGGTTaGGATGGAAACAATACTCCGTTTTCTGGGGGACTGGTGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LTRSLPADRLLSVQG*DGNNTPFSGGLVRL Trigger: GAGCCTCACCAGTCCCCCAGAAAACGGAGTATTGTTTCCATCCAAACCTTGCACTGAAAGGAGCCTGTCAGCAGGAAGTGACCTCGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS CAA 90 bp | GCAATGCCAGAGGATGACTGCAAGAAGTCCTTTGAAGCGGCGGCGTaGACAGTCAGAGAGGAATTCCCAGGCATAAATGGCTTTGCCACG | + |
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Preference number: 6 (lower is better) Translates to: AMPEDDCKKSFEAAA*TVREEFPGINGFAT Trigger: CGTGGCAAAGCCATTTATGCCTGGGAATTCCTCTCTGACTGTCAACGCCGCCGCTTCAAAGGACTTCTTGCAGTCATCCTCTGGCATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS TCA 72 bp | CTCTCCCCACAGTTGTCTCACGAGGTCACTTCCTGCTaGCAGGCTCCTTTCAGTGCAAGGTTTGGATGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSPQLSHEVTSC*QAPFSARFGWK Trigger: TTTCCATCCAAACCTTGCACTGAAAGGAGCCTGTCAGCAGGAAGTGACCTCGTGAGACAACTGTGGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS TCA 72 bp | AGAGCTGAGCGAAAGGGGCCCTCAAACGGACCAAAGTaGTCAGCTGTGGTTCTGCATCTGCCAGACTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: RAERKGPSNGPK*SAVVLHLPDFF Trigger: GAAAAAGTCTGGCAGATGCAGAACCACAGCTGATCACTTTGGTCCGTTTGAGGGCCCCTTTCGCTCAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS GCA 72 bp | TTTATCAAGTCCAATGTAGGGGGTGGAGGTTGCTGGTaGAGAATTCACAACCAGCACCAGCCGTGGCAATGC | + |
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Preference number: 6 (lower is better) Translates to: FIKSNVGGGGCW*RIHNQHQPWQC Trigger: GCATTGCCACGGCTGGTGCTGGTTGTGAATTCTGCACCAGCAACCTCCACCCCCTACATTGGACTTGATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS GCA 72 bp | GCTTGTTTTATCAAGTCCAATGTAGGGGGTGGAGGTTaGTGGTGCAGAATTCACAACCAGCACCAGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: ACFIKSNVGGGG*WCRIHNQHQPW Trigger: CCACGGCTGGTGCTGGTTGTGAATTCTGCACCAGCAACCTCCACCCCCTACATTGGACTTGATAAAACAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS GCA 72 bp | CAAACGGACCAAAGTGATCAGCTGTGGTTCTGCATCTaGCAGACTTTTTCAGGGTCGTCCCCTGTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: QTDQSDQLWFCI*QTFSGSSPVAF Trigger: GAAAGCCACAGGGGACGACCCTGAAAAAGTCTGGCAGATGCAGAACCACAGCTGATCACTTTGGTCCGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CCA 72 bp | TTTGCAACCCAAACACGATGTGCAAAGGGTGGCACGTaGCCTTTGAGTGAACCTGGAAGTCAACGCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: FATQTRCAKGGT*PLSEPGSQRQV Trigger: TACCTGGCGTTGACTTCCAGGTTCACTCAAAGGCCACGTGCCACCCTTTGCACATCGTGTTTGGGTTGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CAA 72 bp | GAGGATGACTGCAAGAAGTCCTTTGAAGCGGCGGCGTaGACAGTCAGAGAGGAATTCCCAGGCATAAATGGC | + |
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Preference number: 6 (lower is better) Translates to: EDDCKKSFEAAA*TVREEFPGING Trigger: GCCATTTATGCCTGGGAATTCCTCTCTGACTGTCAACGCCGCCGCTTCAAAGGACTTCTTGCAGTCATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CAA 72 bp | TTTTCAGGGTCGTCCCCTGTGGCTTTCAGACGTCTGTaGGCCTGGGCACACTTCTGGCTTTCAATATGCATC | + |
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Preference number: 6 (lower is better) Translates to: FSGSSPVAFRRL*AWAHFWLSICI Trigger: GATGCATATTGAAAGCCAGAAGTGTGCCCAGGCCAACAGACGTCTGAAAGCCACAGGGGACGACCCTGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS TCA 72 bp | GATTTACTGTTGTCCCTATTAAACTCCGGGTCTGCATaGGCCGTCTGTTCAGGTAAGGGCAGTGGAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: DLLLSLLNSGSA*AVCSGKGSGEH Trigger: GTGCTCTCCACTGCCCTTACCTGAACAGACGGCTCATGCAGACCCGGAGTTTAATAGGGACAACAGTAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000569990.2 ENST00000642127.1 ENST00000647808.1 |
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| CDS CCA 72 bp | CACTTCCTGCTGACAGGCTCCTTTCAGTGCAAGGTTTaGATGGAAACAATACTCCGTTTTCTGGGGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: HFLLTGSFQCKV*METILRFLGDW Trigger: CCAGTCCCCCAGAAAACGGAGTATTGTTTCCATCCAAACCTTGCACTGAAAGGAGCCTGTCAGCAGGAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS CCA 72 bp | GAAGGGCACACAGAGCATAAACGAAGGGATACAGGTTaGCTTTTCTCTGCAACTAGCATGGGTGGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: EGHTEHKRRDTG*LFSATSMGGWE Trigger: TTCCCAGCCACCCATGCTAGTTGCAGAGAAAAGCCAACCTGTATCCCTTCGTTTATGCTCTGTGTGCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000569990.2 ENST00000642127.1 ENST00000647808.1 |
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| CDS CCA 72 bp | TGTTTTATCAAGTCCAATGTAGGGGGTGGAGGTTGCTaGTGCAGAATTCACAACCAGCACCAGCCGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: CFIKSNVGGGGC*CRIHNQHQPWQ Trigger: TTGCCACGGCTGGTGCTGGTTGTGAATTCTGCACCAGCAACCTCCACCCCCTACATTGGACTTGATAAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CAA 72 bp | CTGGAGGTGAGGGCTCGTGGTTTGCAGCTGTCGGGGTaGTTCTTGTTTTCAGAGTTCTTTGATCCATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LEVRARGLQLSG*FLFSEFFDPLL Trigger: CAGCAATGGATCAAAGAACTCTGAAAACAAGAACAACCCCGACAGCTGCAAACCACGAGCCCTCACCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000569990.2 ENST00000642127.1 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS TCA 72 bp | GTTCGCGCTCGGCTTGATTCTATGAAGGCGTCTATTTaGTGGAACGTACTGGAACAGTTCATAGCCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VRARLDSMKASI*WNVLEQFIASP Trigger: TGGGCTGGCTATGAACTGTTCCAGTACGTTCCATCAAATAGACGCCTTCATAGAATCAAGCCGAGCGCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS CCA 72 bp | TATTTAATCAGCGCTGTAATGGCGAACTGTATTCTGTaGGGAGAGGCCGAGTTCACTCATCCTTCTCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: YLISAVMANCIL*GEAEFTHPSPC Trigger: GCACGGAGAAGGATGAGTGAACTCGGCCTCTCCCCACAGAATACAGTTCGCCATTACAGCGCTGATTAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS CAA 72 bp | TCACTTCCTGCTGACAGGCTCCTTTCAGTGCAAGGTTaGGATGGAAACAATACTCCGTTTTCTGGGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: SLPADRLLSVQG*DGNNTPFSGGL Trigger: CAGTCCCCCAGAAAACGGAGTATTGTTTCCATCCAAACCTTGCACTGAAAGGAGCCTGTCAGCAGGAAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569990.2 |
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| CDS CAA 72 bp | GGCACACTTCTGGCTTTCAATATGCATCTTTCCCCTTaGCAACCCAAACACGATGTGCAAAGGGTGGCACGT | + |
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Preference number: 6 (lower is better) Translates to: GTLLAFNMHLSP*QPKHDVQRVAR Trigger: ACGTGCCACCCTTTGCACATCGTGTTTGGGTTGCAAAGGGGAAAGATGCATATTGAAAGCCAGAAGTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647808.1 ENST00000659438.1 |
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| CDS CCA 72 bp | AGAAGCAGCTTGTTTTATCAAGTCCAATGTAGGGGGTaGAGGTTGCTGGTGCAGAATTCACAACCAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RSSLFYQVQCRG*RLLVQNSQPAP Trigger: TGGTGCTGGTTGTGAATTCTGCACCAGCAACCTCCACCCCCTACATTGGACTTGATAAAACAAGCTGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS TCA 72 bp | AATTTTCCTGGGAACGCCGCCAGGAGGGCATTATGGTaGGATAATGTCCTGTATTTAATCAGCGCTGTAATG | + |
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Preference number: 6 (lower is better) Translates to: NFPGNAARRALW*DNVLYLISAVM Trigger: CATTACAGCGCTGATTAAATACAGGACATTATCTCACCATAATGCCCTCCTGGCGGCGTTCCCAGGAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000569990.2 ENST00000647808.1 ENST00000659438.1 ENST00000662824.1 |
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| CDS TCA 72 bp | GCAGTTATTGCATTAATTACAGTCACATGGCTGTTATaGAGAGAAGGTTTACAGGACCAGCCCCTGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: AVIALITVTWLL*REGLQDQPLDW Trigger: CCAGTCCAGGGGCTGGTCCTGTAAACCTTCTCTTCATAACAGCCATGTGACTGTAATTAATGCAATAACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647808.1 |
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| CDS CAA 90 bp | ACCCGTCAGCACTCATCCAACACAGGCATGTATTGGGCAGCTACTTaGTACCTAGTACTTACAAAGTCAGGAATAAGACAAACACATTTT | + |
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Preference number: 6 (lower is better) Translates to: TRQHSSNTGMYWAAT*YLVLTKSGIRQTHF Trigger: AAAATGTGTTTGTCTTATTCCTGACTTTGTAAGTACTAGGTACAAAGTAGCTGCCCAATACATGCCTGTGTTGGATGAGTGCTGACGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647808.1 |
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| CDS CAA 72 bp | CACTCATCCAACACAGGCATGTATTGGGCAGCTACTTaGTACCTAGTACTTACAAAGTCAGGAATAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: HSSNTGMYWAAT*YLVLTKSGIRQ Trigger: TTGTCTTATTCCTGACTTTGTAAGTACTAGGTACAAAGTAGCTGCCCAATACATGCCTGTGTTGGATGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647808.1 |
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| CDS CAA 72 bp | TTCTTAATTTGTTCTTTAGCATACCTGAGAAGCAGCTaGTTTTATCAAGTCCAATGTAGGGGGTGGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: FLICSLAYLRSS*FYQVQCRGWRL Trigger: CAACCTCCACCCCCTACATTGGACTTGATAAAACAAGCTGCTTCTCAGGTATGCTAAAGAACAAATTAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS CAA 90 bp | ATTGAAAGGGAATTTCACTCATCCCAGGTGATTCTGTTTCTTAATTaGTTCTTTAGCATACCTGAGAAGCAGCTTGTTTTATCAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: IEREFHSSQVILFLN*FFSIPEKQLVLSSP Trigger: TGGACTTGATAAAACAAGCTGCTTCTCAGGTATGCTAAAGAACAAATTAAGAAACAGAATCACCTGGGATGAGTGAAATTCCCTTTCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642127.1 |
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| CDS GCA 72 bp | CAGACAACCATGTTAAACAATCAACTATGCAGTTATTaGATTAATTACAGTCACATGGCTGTTATGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QTTMLNNQLCSY*INYSHMAVMKR Trigger: TCTCTTCATAACAGCCATGTGACTGTAATTAATGCAATAACTGCATAGTTGATTGTTTAACATGGTTGTCTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647808.1 |
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