Pregenerated sensors for HBD (Homo sapiens)
Ensembl gene IDs: ENSG00000223609Ensembl transcript IDs: ENST00000292901.7, ENST00000429817.1, ENST00000643122.1, ENST00000650601.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCTTTATTAGGCAGAAGCCATACCCTTGAAGTAGGCATTGTGTTCCCAAGTTCAAATAGGGTCTTCTTATaGTTATCAGGAAACAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SLLGRSHTLEVGIVFPSSNRVFL*LSGNSP Trigger: TGGACTGTTTCCTGATAACCATAAGAAGACCCTATT...TGAACTTGGGAACACAATGCCTACTTCAAGGGTATGGCTTCTGCCTAATAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643122.1 ENST00000650601.1 |
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| CDS-3UTR GCA 90 bp | CATTCTTTATTAGGCAGAAGCCATACCCTTGAAGTAGGCATTGTGTTCCCAAGTAGACCACCAGTAATCTaGCCAGGGCCTCACCACCAA | + |
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Preference number: 4 (lower is better) Translates to: HSLLGRSHTLEVGIVFPSRPPVI*PGPHHQ Trigger: TTGGTGGTGAGGCCCTGGGCAGATTACTGGTGGTCT...ACTTGGGAACACAATGCCTACTTCAAGGGTATGGCTTCTGCCTAATAAAGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643122.1 ENST00000650601.1 |
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| CDS-3UTR TCA 90 bp | CATTCTTTATTAGGCAGAAGCCATACCCTTGAAGTAGGCATTGTGTTCCCAAGTCTGGGAGTTTCCTGGTaGTCACAGATGAGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HSLLGRSHTLEVGIVFPSLGVSW*SQMSQK Trigger: CTTCTGGCTCATCTGTGATCACCAGGAAACTCCCAG...ACTTGGGAACACAATGCCTACTTCAAGGGTATGGCTTCTGCCTAATAAAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR GCA 90 bp | ATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAACAGTCCAGGATAGACCACCAGTAATCTaGCCAGGGCCTCACCACCAA | + |
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Preference number: 4 (lower is better) Translates to: IESREIGSSYGYQETVQDRPPVI*PGPHHQ Trigger: TTGGTGGTGAGGCCCTGGGCAGATTACTGGTGGTCT...ATCCTGGACTGTTTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643122.1 ENST00000650601.1 |
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| CDS-3UTR GCA 90 bp | CATTCTTTATTAGGCAGAAGCCATACCCTTGAAGTAGGCATTGTGTTCCCAAGTGAAGCATGCCTGCATTaGTGCTTCATGTGTGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HSLLGRSHTLEVGIVFPSEACLH*CFMCGF Trigger: AAAGCCACACATGAAGCAGCAATGCAGGCATGCTTC...ACTTGGGAACACAATGCCTACTTCAAGGGTATGGCTTCTGCCTAATAAAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR TCA 90 bp | CAAGTTCAGAAAATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAACCTGGTGATCACAGATaGGCCAGAAGCATGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QVQKIESREIGSSYGYQEPGDHR*ARSMPA Trigger: TGCAGGCATGCTTCTGGCTCATCTGTGATCACCAGG...TTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTATTTTCTGAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR GCA 90 bp | ATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAACAGTCCAGGATGATGAGCCAGAAGCATaGCTGCATTGCTGCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: IESREIGSSYGYQETVQDDEPEA*LHCCFM Trigger: CATGAAGCAGCAATGCAGGCATGCTTCTGGCTCATC...ATCCTGGACTGTTTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR GCA 90 bp | ATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAACAGTCCAGGATGTTGCTAGTGAACACTaGCCAGAATCTCACCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IESREIGSSYGYQETVQDVASEH*PESHLQ Trigger: CTGGAGGTGAGATTCTGGGCAGTGTTCACTAGCAAC...ATCCTGGACTGTTTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR CCA 90 bp | CAAGTTCAGAAAATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAATTTACTTCTCCTCTCTaGCCCCCAGCCCTTTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QVQKIESREIGSSYGYQEFTSPL*PPALCL Trigger: GAGGCAAAGGGCTGGGGGCCAGAGAGGAGAAGTAAA...TTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTATTTTCTGAACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR CCA 90 bp | CAAGTTCAGAAAATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAATGCTTCACAGGCTGGTaGCAGCAGCCTTCTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QVQKIESREIGSSYGYQECFTGW*QQPSCQ Trigger: CTGACAAGAAGGCTGCTGCCACCAGCCTGTGAAGCA...TTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTATTTTCTGAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR TCA 90 bp | ATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAACAGTCCAGGATCCTTCTTGTCAGCAGTaGAATGCACTACAGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: IESREIGSSYGYQETVQDPSCQQ*NALQCQ Trigger: CTGACACTGTAGTGCATTTCACTGCTGACAAGAAGG...ATCCTGGACTGTTTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR CCA 90 bp | CATTCTTTATTAGGCAGAAGCCATACCCTTGAAGTAGGCATTGTGTTCCCAAGTTTGCTGCTTCATGTGTaGCTTTTTACTTCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HSLLGRSHTLEVGIVFPSLLLHV*LFTSPL Trigger: GAGAGGAGAAGTAAAAAGCCACACATGAAGCAGCAA...ACTTGGGAACACAATGCCTACTTCAAGGGTATGGCTTCTGCCTAATAAAGAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR CCA 90 bp | ATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAACAGTCCAGGATCTACAGTGTCAGATCTaGGAGTTTCCTGGTGATCAC | + |
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Preference number: 4 (lower is better) Translates to: IESREIGSSYGYQETVQDLQCQI*EFPGDH Trigger: GTGATCACCAGGAAACTCCCAGATCTGACACTGTAG...ATCCTGGACTGTTTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR GCA 90 bp | CAAGTTCAGAAAATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAAGCCAGAAGCATGCCTaGATTGCTGCTTCATGTGTG | + |
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Preference number: 4 (lower is better) Translates to: QVQKIESREIGSSYGYQESQKHA*IAASCV Trigger: CACACATGAAGCAGCAATGCAGGCATGCTTCTGGCT...TTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTATTTTCTGAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR CCA 90 bp | CAGAAAATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAACAGTCAATAGGGTCTTCTTATaGTTATCAGGAAACAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QKIESREIGSSYGYQETVNRVFL*LSGNSP Trigger: TGGACTGTTTCCTGATAACCATAAGAAGACCCTATT...GACTGTTTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTATTTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643122.1 ENST00000650601.1 |
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| CDS GCA 90 bp | AGTTTCCTGGTGATCACAGATGAGCCAGAAGCATGCCTGCATTGCTaGTTCATGTGTGGCTTTTTACTTCTCCTCTCTGGCCCCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SFLVITDEPEACLHC*FMCGFLLLLSGPQP Trigger: GGGCTGGGGGCCAGAGAGGAGAAGTAAAAAGCCACACATGAAGCAGCAATGCAGGCATGCTTCTGGCTCATCTGTGATCACCAGGAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS GCA 90 bp | GGGAGTTTCCTGGTGATCACAGATGAGCCAGAAGCATGCCTGCATTaGTGCTTCATGTGTGGCTTTTTACTTCTCCTCTCTGGCCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GSFLVITDEPEACLH*CFMCGFLLLLSGPQ Trigger: CTGGGGGCCAGAGAGGAGAAGTAAAAAGCCACACATGAAGCAGCAATGCAGGCATGCTTCTGGCTCATCTGTGATCACCAGGAAACTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS TCA 90 bp | TCAGCAGTGAAATGCACTACAGTGTCAGATCTGGGAGTTTCCTGGTaGTCACAGATGAGCCAGAAGCATGCCTGCATTGCTGCTTCATGT | + |
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Preference number: 5 (lower is better) Translates to: SAVKCTTVSDLGVSW*SQMSQKHACIAASC Trigger: ACATGAAGCAGCAATGCAGGCATGCTTCTGGCTCATCTGTGATCACCAGGAAACTCCCAGATCTGACACTGTAGTGCATTTCACTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS GCA 90 bp | GTGAACACTGTTATGTCAGAAGAAAGTGTAAGCAACAGTCGACTCTaGCCTGCCTTTTATGCTGGTCCTGTCCTCCCATATTCAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: VNTVMSEESVSNSRL*PAFYAGPVLPYSAR Trigger: TCTGGCTGAATATGGGAGGACAGGACCAGCATAAAAGGCAGGGCAGAGTCGACTGTTGCTTACACTTTCTTCTGACATAACAGTGTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429817.1 |
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| CDS-3UTR CAA 90 bp | CATTCTTTATTAGGCAGAAGCCATACCCTTGAAGTAGGCATTGTGTTCCCAAGTCTTCTCACCTTAACCTaGCTTCACAGGCTGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: HSLLGRSHTLEVGIVFPSLLTLT*LHRLVA Trigger: TGCCACCAGCCTGTGAAGCAAGGTTAAGGTGAGAAG...ACTTGGGAACACAATGCCTACTTCAAGGGTATGGCTTCTGCCTAATAAAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR CAA 90 bp | TCTTTATTAGGCAGAAGCCATACCCTTGAAGTAGGCATTGTGTTCCCAAGTTCAACACACACCAGCACATaGCCCAAGAGCCTGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SLLGRSHTLEVGIVFPSSTHTST*PKSLKF Trigger: GAACTTCAGGCTCTTGGGCAATGTGCTGGTGTGTGT...TGAACTTGGGAACACAATGCCTACTTCAAGGGTATGGCTTCTGCCTAATAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643122.1 ENST00000650601.1 |
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| CDS GCA 90 bp | CACTGTTATGTCAGAAGAAAGTGTAAGCAACAGTCGACTCTGCCCTaGCTTTTATGCTGGTCCTGTCCTCCCATATTCAGCCAGATTAAA | + |
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Preference number: 5 (lower is better) Translates to: HCYVRRKCKQQSTLP*LLCWSCPPIFSQIK Trigger: TTTAATCTGGCTGAATATGGGAGGACAGGACCAGCATAAAAGGCAGGGCAGAGTCGACTGTTGCTTACACTTTCTTCTGACATAACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429817.1 |
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| CDS-3UTR CAA 90 bp | ATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAACAGTCCAGGATGTGGCAGCAGCCTTCTaGTCAGCAGTGAAATGCACT | + |
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Preference number: 5 (lower is better) Translates to: IESREIGSSYGYQETVQDVAAAF*SAVKCT Trigger: AGTGCATTTCACTGCTGACAAGAAGGCTGCTGCCAC...ATCCTGGACTGTTTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS-3UTR CAA 90 bp | CAAGTTCAGAAAATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAACACACACCAGCACATaGCCCAAGAGCCTGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: QVQKIESREIGSSYGYQETHTST*PKSLKF Trigger: GAACTTCAGGCTCTTGGGCAATGTGCTGGTGTGTGT...TTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTATTTTCTGAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643122.1 ENST00000650601.1 |
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| CDS-3UTR CAA 90 bp | CAAGTTCAGAAAATAGAATCTAGGGAAATAGGGTCTTCTTATGGTTATCAGGAAAGAAGCATGCCTGCATaGCTGCTTCATGTGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QVQKIESREIGSSYGYQERSMPA*LLHVWL Trigger: AAGCCACACATGAAGCAGCAATGCAGGCATGCTTCT...TTCCTGATAACCATAAGAAGACCCTATTTCCCTAGATTCTATTTTCTGAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS CAA 90 bp | GTGAACACTGCCCAGAATCTCACCTCCAGCCTTCTCACCTTAACCTaGCTTCACAGGCTGGTGGCAGCAGCCTTCTTGTCAGCAGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VNTAQNLTSSLLTLT*LHRLVAAAFLSAVK Trigger: TTTCACTGCTGACAAGAAGGCTGCTGCCACCAGCCTGTGAAGCAAGGTTAAGGTGAGAAGGCTGGAGGTGAGATTCTGGGCAGTGTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS CAA 90 bp | CTTCTCACCTTAACCTTGCTTCACAGGCTGGTGGCAGCAGCCTTCTaGTCAGCAGTGAAATGCACTACAGTGTCAGATCTGGGAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLTLTLLHRLVAAAF*SAVKCTTVSDLGVS Trigger: GGAAACTCCCAGATCTGACACTGTAGTGCATTTCACTGCTGACAAGAAGGCTGCTGCCACCAGCCTGTGAAGCAAGGTTAAGGTGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS GCA 72 bp | GTGATCACAGATGAGCCAGAAGCATGCCTGCATTGCTaGTTCATGTGTGGCTTTTTACTTCTCCTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VITDEPEACLHC*FMCGFLLLLSG Trigger: GCCAGAGAGGAGAAGTAAAAAGCCACACATGAAGCAGCAATGCAGGCATGCTTCTGGCTCATCTGTGATCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS CAA 72 bp | TTAACCTTGCTTCACAGGCTGGTGGCAGCAGCCTTCTaGTCAGCAGTGAAATGCACTACAGTGTCAGATCTG | + |
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Preference number: 6 (lower is better) Translates to: LTLLHRLVAAAF*SAVKCTTVSDL Trigger: CAGATCTGACACTGTAGTGCATTTCACTGCTGACAAGAAGGCTGCTGCCACCAGCCTGTGAAGCAAGGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS TCA 72 bp | AAATGCACTACAGTGTCAGATCTGGGAGTTTCCTGGTaGTCACAGATGAGCCAGAAGCATGCCTGCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: KCTTVSDLGVSW*SQMSQKHACIA Trigger: AGCAATGCAGGCATGCTTCTGGCTCATCTGTGATCACCAGGAAACTCCCAGATCTGACACTGTAGTGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643122.1 |
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| CDS GCA 72 bp | GTTATGTCAGAAGAAAGTGTAAGCAACAGTCGACTCTaGCCTGCCTTTTATGCTGGTCCTGTCCTCCCATAT | + |
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Preference number: 6 (lower is better) Translates to: VMSEESVSNSRL*PAFYAGPVLPY Trigger: ATATGGGAGGACAGGACCAGCATAAAAGGCAGGGCAGAGTCGACTGTTGCTTACACTTTCTTCTGACATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429817.1 |
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| CDS CCA 72 bp | TGTAAGCAACAGTCGACTCTGCCCTGCCTTTTATGCTaGTCCTGTCCTCCCATATTCAGCCAGATTAAATTT | + |
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Preference number: 6 (lower is better) Translates to: CKQQSTLPCLLC*SCPPIFSQIKF Trigger: AAATTTAATCTGGCTGAATATGGGAGGACAGGACCAGCATAAAAGGCAGGGCAGAGTCGACTGTTGCTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429817.1 |
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| CDS GCA 72 bp | TCTCTTTTCCCATGTACTCTTTGTAAAATAAACAAGTaGTCCCTATCTGTAGAGCCTCAGGAACCTTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: SLFPCTLCKINK*SLSVEPQEPSY Trigger: GTAAGAAGGTTCCTGAGGCTCTACAGATAGGGAGCACTTGTTTATTTTACAAAGAGTACATGGGAAAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000292901.7 |
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