Pregenerated sensors for HAX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000143575Ensembl transcript IDs: ENST00000471326.5, ENST00000477780.2, ENST00000492550.1, ENST00000531435.5
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTAAATCAACTCATGGGTGGCAAAGTGGGACAAGAGCAAGGGGTCTaGGAAGCTAGGGAGAGGGTCGGAGGACTGGCTGCCACATCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LNQLMGGKVGQEQGV*EARERVGGLAATSK Trigger: TTTTGATGTGGCAGCCAGTCCTCCGACCCTCTCCCTAGCTTCCCAGACCCCTTGCTCTTGTCCCACTTTGCCACCCATGAGTTGATTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471326.5 |
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| CDS TCA 90 bp | TTGCTGTTTCTCCTCTTAATGACCGCCTTGGTTACTGTGGCGGGGTaGGTGTTCAATGTTGCGACTTCTGTCCTCTCTGCAGGAGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LLFLLLMTALVTVAG*VFNVATSVLSAGVE Trigger: TTCAACTCCTGCAGAGAGGACAGAAGTCGCAACATTGAACACTCACCCCGCCACAGTAACCAAGGCGGTCATTAAGAGGAGAAACAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471326.5 |
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| CDS CCA 90 bp | GACAAGAGCAAGGGGTCTGGGAAGCTAGGGAGAGGGTCGGAGGACTaGCTGCCACATCAAAACATTAATACAATGGCTGACAGTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: DKSKGSGKLGRGSED*LPHQNINTMADSSF Trigger: AAAAGAACTGTCAGCCATTGTATTAATGTTTTGATGTGGCAGCCAGTCCTCCGACCCTCTCCCTAGCTTCCCAGACCCCTTGCTCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471326.5 |
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| CDS CCA 90 bp | CAGCAGTTTCTTTACACAGATCCCTGTTTCAGGGCATTCGTTCCCTaGCCATACTTTCCTTTACCTCTTTCTTTCAACTCACCCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: QQFLYTDPCFRAFVP*PYFPLPLSFNSPHL Trigger: CAGATGGGGTGAGTTGAAAGAAAGAGGTAAAGGAAAGTATGGCCAGGGAACGAATGCCCTGAAACAGGGATCTGTGTAAAGAAACTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492550.1 |
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| CDS CCA 72 bp | CTCATGGGTGGCAAAGTGGGACAAGAGCAAGGGGTCTaGGAAGCTAGGGAGAGGGTCGGAGGACTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LMGGKVGQEQGV*EARERVGGLAA Trigger: GGCAGCCAGTCCTCCGACCCTCTCCCTAGCTTCCCAGACCCCTTGCTCTTGTCCCACTTTGCCACCCATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471326.5 |
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| CDS CAA 90 bp | GCCCGGGTCCCTGTTGCATCACCCCAGGTTGGAGAAAGGCTTAGTTaGCTGTTTCTCCTCTTAATGACCGCCTTGGTTACTGTGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: ARVPVASPQVGERLS*LFLLLMTALVTVAG Trigger: CCCCGCCACAGTAACCAAGGCGGTCATTAAGAGGAGAAACAGCAAACTAAGCCTTTCTCCAACCTGGGGTGATGCAACAGGGACCCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471326.5 |
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| CDS CAA 72 bp | CCGCCTTGGTTACTGTGGCGGGGTGAGTGTTCAATGTaGCGACTTCTGTCCTCTCTGCAGGAGTTGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PPWLLWRGECSM*RLLSSLQELKE Trigger: CTCCTTCAACTCCTGCAGAGAGGACAGAAGTCGCAACATTGAACACTCACCCCGCCACAGTAACCAAGGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471326.5 |
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| CDS TCA 72 bp | CTCCTCTTAATGACCGCCTTGGTTACTGTGGCGGGGTaGGTGTTCAATGTTGCGACTTCTGTCCTCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLLMTALVTVAG*VFNVATSVLSA Trigger: TGCAGAGAGGACAGAAGTCGCAACATTGAACACTCACCCCGCCACAGTAACCAAGGCGGTCATTAAGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471326.5 |
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| CDS CAA 72 bp | CAGGACCTGGAAGTTCTGCAGAAAGGTGGCAGGTGTTaGCTGGGATGGGAAAGGACTTGGGCTCTATTAATC | + |
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Preference number: 6 (lower is better) Translates to: QDLEVLQKGGRC*LGWERTWALLI Trigger: GATTAATAGAGCCCAAGTCCTTTCCCATCCCAGCAAACACCTGCCACCTTTCTGCAGAACTTCCAGGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477780.2 ENST00000531435.5 |
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| CDS CAA 90 bp | TCTCTGACTCAGGACCTGGAAGTTCTGCAGAAAGGTGGCAGGTGTTaGCTGGGATGGGAAAGGACTTGGGCTCTATTAATCTCTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SLTQDLEVLQKGGRC*LGWERTWALLISLK Trigger: TTTCAGAGAGATTAATAGAGCCCAAGTCCTTTCCCATCCCAGCAAACACCTGCCACCTTTCTGCAGAACTTCCAGGTCCTGAGTCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477780.2 ENST00000531435.5 |
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| CDS CCA 72 bp | CTTTACACAGATCCCTGTTTCAGGGCATTCGTTCCCTaGCCATACTTTCCTTTACCTCTTTCTTTCAACTCA | + |
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Preference number: 6 (lower is better) Translates to: LYTDPCFRAFVP*PYFPLPLSFNS Trigger: TGAGTTGAAAGAAAGAGGTAAAGGAAAGTATGGCCAGGGAACGAATGCCCTGAAACAGGGATCTGTGTAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492550.1 |
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