RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAUS8 (Homo sapiens)

Ensembl gene IDs: ENSG00000131351

Ensembl transcript IDs: ENST00000253669.10, ENST00000448593.6, ENST00000593360.1, ENST00000595958.1, ENST00000597479.1, ENST00000597917.1, ENST00000598517.5, ENST00000601564.5

Found 394 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCCCAGACTTCCTGGTTTGCCAAGGCTGCCTCTTTGCTTGCCTCTaGGGAGAGTTCCAGCACCTGGGCAAAGCTCCTTCGGAGCTCAAG +
Preference number: 1 (lower is better)
Translates to: FPDFLVCQGCLFACL*GEFQHLGKAPSELK
Trigger: CTTGAGCTCCGAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCAGGAAGTCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR CCA 90 bp TTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTaGTCACCAGTTCATGCTGCAGGGCGTCTAAGAGCTGCTGCCCAT +
Preference number: 1 (lower is better)
Translates to: FLPNHQHQVLPGGAE*SPVHAAGRLRAAAH
Trigger: ATGGGCAGCAGCTCTTAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR TCA 90 bp ACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGCTGCAGGGCGTCTAAGAGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: TFSSESPTSSSPRRR*VVTSSCCRASKSCC
Trigger: GCAGCAGCTCTTAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR TCA 90 bp CAAAGCTCCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTTaGGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAAT +
Preference number: 1 (lower is better)
Translates to: QSSFGAQGPFSPSRP*VRSVSPAPAHFLPN
Trigger: ATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGAGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR GCA 90 bp TTTTTCGCCGTCACGTCCTTGAGTTCGCTCAGTAAGTCCAGCACCTaGACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: FFAVTSLSSLSKSST*TFSSESPTSSSPRR
Trigger: CCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR TCA 90 bp AGATTGTTCTCCATCTTTACGGATAGTAGCGTCAGCAGTAGTGTCTaGGACTCCATCATTTCCATTGCTTCAGATAAATCCGGGCTCTTT +
Preference number: 1 (lower is better)
Translates to: RLFSIFTDSSVSSSV*DSIISIASDKSGLF
Trigger: AAAGAGCCCGGATTTATCTGAAGCAATGGAAATGATGGAGTCTCAGACACTACTGCTGACGCTACTATCCGTAAAGATGGAGAACAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR GCA 90 bp TGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCTTCGGAGCTCAAGGTCAGGGCGTCTAAGAGCTaGTGCCCATCTCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: CLCGEFQHLGKAPSELKVRASKS*CPSPSR
Trigger: CCTGGAGGGAGATGGGCAGCAGCTCTTAGACGCCCT...GACCTTGAGCTCCGAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CCA 90 bp TCCAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCCTGAGCATCTCGATCTaGGCATCCAGGACATCTGCC +
Preference number: 2 (lower is better)
Translates to: SRAVANVLYCSLKRVATALSISI*ASRTSA
Trigger: GGCAGATGTCCTGGATGCCCAGATCGAGATGCTCAG...GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR CCA 90 bp CACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACCAGTTCATGCTGCACTCCCTCCAGGTGGATaGACCTCACGGGCAGCTCGT +
Preference number: 2 (lower is better)
Translates to: HQHQVLPGGAEWSPVHAALPPGG*TSRAAR
Trigger: ACGAGCTGCCCGTGAGGTCCATCCACCTGGAGGGAG...TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR CCA 90 bp CTCCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTTGAGTTCGCTCAGTCCATCTCCCTCCAGGTaGATGGACCTCACGGGCAGC +
Preference number: 2 (lower is better)
Translates to: LLRSSRSFFAVTSLSSLSPSPSR*MDLTGS
Trigger: GCTGCCCGTGAGGTCCATCCACCTGGAGGGAGATGG...ACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR GCA 90 bp ATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACCTCACGGGCAGCTCGTaGCTGGTAGTGTCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: IFFRITNIKFSQEALSGHLTGSS*LVVSRA
Trigger: GGCCCTGGACACTACCAGGCACGAGCTGCCCGTGAG...GTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR CCA 90 bp TCCTCTGAGAGAGGAGAAGCCTGCGCTTCAGCTCGTGGGCCTTTTTCTGTAGCTGCCCTTCCAGCAACGTaGACTGCAGGTCACCCTTTC +
Preference number: 2 (lower is better)
Translates to: SSERGEACASARGPFSVAALPAT*TAGHPF
Trigger: GAAAGGGTGACCTGCAGTCCACGTTGCTGGAAGGGC...AGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CCA 90 bp CTCCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTTGAGTTCGCTCAGTGAGATCCAGGTCAGGTaGAGCTGTGCCATGCCCTTC +
Preference number: 2 (lower is better)
Translates to: LLRSSRSFFAVTSLSSLSEIQVR*SCAMPF
Trigger: GAAGGGCATGGCACAGCTCCACCTGACCTGGATCTC...ACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR GCA 90 bp CACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGTCCAGCAACGTGGACTaGAGGTCACCCTTTCCGACC +
Preference number: 2 (lower is better)
Translates to: HLHIFFRITNIKFSQEALSSNVD*RSPFPT
Trigger: GGTCGGAAAGGGTGACCTGCAGTCCACGTTGCTGGA...CAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR GCA 90 bp CACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACCAGTTCATGCTGCAGCGAATGTCCTGTATTaGTCCTTGAAGCGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: HQHQVLPGGAEWSPVHAAANVLY*SLKRVA
Trigger: GGCCACACGCTTCAAGGAGCAATACAGGACATTCGC...TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR CCA 90 bp TCCAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCCCTGCAGGAGCCTTTTaGGTTGTCTTCTTTTCATAC +
Preference number: 2 (lower is better)
Translates to: SRAVANVLYCSLKRVATAPAGAF*VVFFSY
Trigger: GTATGAAAAGAAGACAACCCAAAAGGCTCCTGCAGG...GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CCA 90 bp TTCGCCGTCACGTCCTTGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTCCAGGAGGCGCTGAGTaGTCACCAGTTCATGCTGCA +
Preference number: 2 (lower is better)
Translates to: FAVTSLSSLSKSSTCTFSPGGAE*SPVHAA
Trigger: TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGG...AGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR TCA 90 bp CGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTTCCCTCGGGTCTGTaGCCCATCTCCTGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: RSVSPAPAHFLPNHQHQVLPSGL*PISCRS
Trigger: GCTCCTGCAGGAGATGGGTCACAGACCCGAGGGAAG...AACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR TCA 90 bp CTGCCTCTTTGCTTGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCTTCGTCAGCAGTAGTGTCTaGGACTCCATCATTTCCATT +
Preference number: 2 (lower is better)
Translates to: LPLCLPLRRVPAPGQSSFVSSSV*DSIISI
Trigger: AATGGAAATGATGGAGTCTCAGACACTACTGCTGAC...GAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR TCA 90 bp GCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCGAAGGTCAGCAGTAGTGTCTaGGACTCCATCATTTCCATT +
Preference number: 2 (lower is better)
Translates to: AVANVLYCSLKRVATASKVSSSV*DSIISI
Trigger: AATGGAAATGATGGAGTCTCAGACACTACTGCTGAC...CTTCGAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR CAA 90 bp GCAAAGCTCCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTaGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAA +
Preference number: 2 (lower is better)
Translates to: AKLLRSSRSFFAVTS*SSLSKSSTCTFSSE
Trigger: TTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGAGCTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR TCA 90 bp ATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACTCCTGTATTGCTCCTTaGAGCGTGTGGCCACTGCCT +
Preference number: 2 (lower is better)
Translates to: IFFRITNIKFSQEALSGHSCIAP*SVWPLP
Trigger: AGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGA...GTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR TCA 90 bp AGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCATCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGC +
Preference number: 2 (lower is better)
Translates to: SSLSKSSTCTFSSESPTSSPRRR*VVTSSC
Trigger: GCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGA...TGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR GCA 90 bp CGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTGGTGGAGCTGTGCCATaGCCTTCCAGCAACGTGGAC +
Preference number: 2 (lower is better)
Translates to: RSVSPAPAHFLPNHQHQVGGAVP*PSSNVD
Trigger: GTCCACGTTGCTGGAAGGGCATGGCACAGCTCCACC...AACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR GCA 90 bp GCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTCCTTTCCGACCCCACTaGTATCTGCTTTGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: APAHFLPNHQHQVLPGGAPFRPH*YLLCFS
Trigger: AGAAAAGCAAAGCAGATAGCAGTGGGGTCGGAAAGG...AGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CCA 90 bp TTCGCCGTCACGTCCTTGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTTTTTCTGGAGCAGGCTaGATTTCCTTCCACCTTCAG +
Preference number: 2 (lower is better)
Translates to: FAVTSLSSLSKSSTCTFSFSGAG*ISFHLQ
Trigger: CTGAAGGTGGAAGGAAATCCAGCCTGCTCCAGAAAA...AGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CAA 90 bp AGGCTGCCTCTTTGCTTGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCGTCCTGTATTGCTCCTaGAAGCGTGTGGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: RLPLCLPLRRVPAPGQSSVLYCS*KRVATA
Trigger: GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGAC...GGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR GCA 72 bp CTTCCCAGACTTCCTGGTTTGCCAAGGCTGCCTCTTTaGTTGCCTCTGCGGAGAGTTCCAGCACCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: LPRLPGLPRLPL*LPLRRVPAPGQ
Trigger: TTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCAGGAAGTCTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CAA 90 bp CACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACCAGTTCATGCTGCAGGCGAATGTCCTGTATaGCTCCTTGAAGCGTGTGGC +
Preference number: 3 (lower is better)
Translates to: HQHQVLPGGAEWSPVHAAGECPV*LLEACG
Trigger: GCCACACGCTTCAAGGAGCAATACAGGACATTCGCC...TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR TCA 72 bp TCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGCTGCAGGGCGTCTAAG +
Preference number: 3 (lower is better)
Translates to: SESPTSSSPRRR*VVTSSCCRASK
Trigger: CTTAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR CAA 90 bp TCCTCTGAGAGAGGAGAAGCCTGCGCTTCAGCTCGTGGGCCTTTTTCTGTAGCTCCACTGCTATCTGCTTaGCTTTTCTGGAGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: SSERGEACASARGPFSVAPLLSA*LFWSRL
Trigger: CAGCCTGCTCCAGAAAAGCAAAGCAGATAGCAGTGG...AGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR CCA 72 bp CCCCACTGCTATCTGCTTTGCTTTTCTGGAGCAGGCTaGATTTCCTTCCACCTTCAGACATCTTCCCTCGGG +
Preference number: 3 (lower is better)
Translates to: PHCYLLCFSGAG*ISFHLQTSSLG
Trigger: CCCGAGGGAAGATGTCTGAAGGTGGAAGGAAATCCAGCCTGCTCCAGAAAAGCAAAGCAGATAGCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR CCA 72 bp AATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTaGTCACCAGTTCATGCTGCAGGGCGTCTAAGAGCT +
Preference number: 3 (lower is better)
Translates to: NHQHQVLPGGAE*SPVHAAGRLRA
Trigger: AGCTCTTAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR CAA 90 bp ATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACGTCCTGTATTGCTCCTaGAAGCGTGTGGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: IFFRITNIKFSQEALSGHVLYCS*KRVATA
Trigger: GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGAC...GTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR TCA 72 bp TTTCCTTCCACCTTCAGACATCTTCCCTCGGGTCTGTaGCCCATCTCCTGCAGGAGCCTTTTGGGTTGTCTT +
Preference number: 3 (lower is better)
Translates to: FPSTFRHLPSGL*PISCRSLLGCL
Trigger: AAGACAACCCAAAAGGCTCCTGCAGGAGATGGGTCACAGACCCGAGGGAAGATGTCTGAAGGTGGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR CCA 72 bp GCTTTTGTCATTAATAGCAGAGAGATCCAGGTCAGGTaGAGCTGTGCCATGCCCTTCCAGCAACGTGGACTG +
Preference number: 3 (lower is better)
Translates to: AFVINSREIQVR*SCAMPFQQRGL
Trigger: CAGTCCACGTTGCTGGAAGGGCATGGCACAGCTCCACCTGACCTGGATCTCTCTGCTATTAATGACAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR TCA 72 bp TTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTTaGGTTCGCTCAGTAAGTCCAGCACCTGCACATTTT +
Preference number: 3 (lower is better)
Translates to: FGAQGPFSPSRP*VRSVSPAPAHF
Trigger: AAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CAA 90 bp GCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTAACTGTGGCGTCTTTTaGACGATGCTTTTGTCATTA +
Preference number: 3 (lower is better)
Translates to: APAHFLPNHQHQVLPGGANCGVF*TMLLSL
Trigger: TAATGACAAAAGCATCGTCAAAAAGACGCCACAGTT...AGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CAA 90 bp TTCGCCGTCACGTCCTTGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTCAGGTTTCTTTGATATaGTTTTTGCTAACTGTGGCG +
Preference number: 3 (lower is better)
Translates to: FAVTSLSSLSKSSTCTFSQVSLI*FLLTVA
Trigger: CGCCACAGTTAGCAAAAACAATATCAAAGAAACCTG...AGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CAA 90 bp TTCGCCGTCACGTCCTTGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTGGGCAGAAAATGATGTaGACTCAGGTTTCTTTGATA +
Preference number: 3 (lower is better)
Translates to: FAVTSLSSLSKSSTCTFSGQKMM*TQVSLI
Trigger: TATCAAAGAAACCTGAGTCAACATCATTTTCTGCCC...AGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CAA 90 bp AAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGACTCCATCATTTCCATaGCTTCAGATAAATCCGGGC +
Preference number: 3 (lower is better)
Translates to: KSSTCTFSSESPTSSSPRTPSFP*LQINPG
Trigger: GCCCGGATTTATCTGAAGCAATGGAAATGATGGAGT...CCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR GCA 72 bp GTCACGTCCTTGAGTTCGCTCAGTAAGTCCAGCACCTaGACATTTTCTTCCGAATCACCAACATCAAGTTCT +
Preference number: 3 (lower is better)
Translates to: VTSLSSLSKSST*TFSSESPTSSS
Trigger: AGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CAA 90 bp TCAGCAGTAGTGTCTGAGACTCCATCATTTCCATTGCTTCAGATAAATCCGGGCCAGGAGCCTTTTGGGTaGTCTTCTTTTCATACTGCA +
Preference number: 3 (lower is better)
Translates to: SAVVSETPSFPLLQINPGQEPFG*SSFHTA
Trigger: TGCAGTATGAAAAGAAGACAACCCAAAAGGCTCCTG...GCCCGGATTTATCTGAAGCAATGGAAATGATGGAGTCTCAGACACTACTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598517.5
3UTR-3UTR CAA 90 bp CTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTTCAAACTCAGCAAGATaGTTCTCCATCTTTACGGAT +
Preference number: 3 (lower is better)
Translates to: LHIFFRITNIKFSQEALSSNSAR*FSIFTD
Trigger: ATCCGTAAAGATGGAGAACAATCTTGCTGAGTTTGA...ACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR CAA 90 bp TCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCACTCCATCATTTCCATaGCTTCAGATAAATCCGGGC +
Preference number: 3 (lower is better)
Translates to: SVSPAPAHFLPNHQHQVLTPSFP*LQINPG
Trigger: GCCCGGATTTATCTGAAGCAATGGAAATGATGGAGT...GAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR-3UTR CAA 90 bp TCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCTCAAACTCAGCAAGATaGTTCTCCATCTTTACGGAT +
Preference number: 3 (lower is better)
Translates to: SVSPAPAHFLPNHQHQVLSNSAR*FSIFTD
Trigger: ATCCGTAAAGATGGAGAACAATCTTGCTGAGTTTGA...GAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp CAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCCTTCCCTCGGGTCTGTaGCCCATCTCCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGRGECPVLLLEACGHCLLPSGL*PISCRS
Trigger: GCTCCTGCAGGAGATGGGTCACAGACCCGAGGGAAG...GAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR TCA 90 bp GTCCAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTGCCTCGAAGGGGCTaGGCATCTCGATCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VQGRGECPVLLLEACGHCLPRRG*ASRSGH
Trigger: ATGCCCAGATCGAGATGCTCAGCCCCTTCGAGGCAG...GCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp GCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCGAAGCTCCCTCCAGGTGGATaGACCTCACGGGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: AVANVLYCSLKRVATASKLPPGG*TSRAAR
Trigger: ACGAGCTGCCCGTGAGGTCCATCCACCTGGAGGGAG...CTTCGAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp CAGACTTCCTGGTTTGCCAAGGCTGCCTCTTTGCTTGCCTCTGCGGAGAGTTCCGGGGGCGCCATGCCCTaGGTCTCTTCCCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: QTSWFAKAASLLASAESSGGAMP*VSSQTS
Trigger: GGAAGTCTGGGAAGAGACCCAGGGCATGGCGCCCCC...GGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCAGGAAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp TGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCTTCGGAGCTCAAGGTCTCCAGCAACGTGGACTaGAGGTCACCCTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: CLCGEFQHLGKAPSELKVSSNVD*RSPFPT
Trigger: GGTCGGAAAGGGTGACCTGCAGTCCACGTTGCTGGA...GACCTTGAGCTCCGAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp CTGCCTCTTTGCTTGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCTTCAGGGCGTCTAAGAGCTaGTGCCCATCTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPLCLPLRRVPAPGQSSFRASKS*CPSPSR
Trigger: CCTGGAGGGAGATGGGCAGCAGCTCTTAGACGCCCT...GAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp GTCCAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCGGCTGCCTCTTTGCTTaGCTCTGCGGAGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VQGRGECPVLLLEACGHCGCLFA*LCGEFQ
Trigger: CTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCC...GCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CCA 90 bp CAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCCCAGGAGGCGCTGAGTaGTCACCAGTTCATGCTGCA +
Preference number: 4 (lower is better)
Translates to: QGRGECPVLLLEACGHCLPGGAE*SPVHAA
Trigger: TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGG...GAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp CAGACTTCCTGGTTTGCCAAGGCTGCCTCTTTGCTTGCCTCTGCGGAGAGTTCCTCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: QTSWFAKAASLLASAESSSPRRR*VVTSSC
Trigger: GCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGA...GGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCAGGAAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp GCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCGAAGTCCAGCAACGTGGACTaGAGGTCACCCTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: AVANVLYCSLKRVATASKSSNVD*RSPFPT
Trigger: GGTCGGAAAGGGTGACCTGCAGTCCACGTTGCTGGA...CTTCGAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp CCCGCTTCCTCTGAGAGAGGAGAAGCCTGCGCTTCAGCTCGTGGGCCTTTTTCTGAGATCCAGGTCAGGTaGAGCTGTGCCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PASSERGEACASARGPFSEIQVR*SCAMPF
Trigger: GAAGGGCATGGCACAGCTCCACCTGACCTGGATCTC...AGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGAAGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp CAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCCTGAGCATCTCGATCTaGGCATCCAGGACATCTGCC +
Preference number: 4 (lower is better)
Translates to: QGRGECPVLLLEACGHCLLSISI*ASRTSA
Trigger: GGCAGATGTCCTGGATGCCCAGATCGAGATGCTCAG...GAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp TCCTCTGAGAGAGGAGAAGCCTGCGCTTCAGCTCGTGGGCCTTTTTCTGTAGCTGGTGGAGCTGTGCCATaGCCTTCCAGCAACGTGGAC +
Preference number: 4 (lower is better)
Translates to: SSERGEACASARGPFSVAGGAVP*PSSNVD
Trigger: GTCCACGTTGCTGGAAGGGCATGGCACAGCTCCACC...AGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp CTCCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTTGAGTTCGCTCAGTGAGAGAGGAGAAGCCTaGGCTTCAGCTCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLRSSRSFFAVTSLSSLSERGEA*ASARGP
Trigger: AGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTC...ACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp CAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTCACGGGCAGCTCGTaGCTGGTAGTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QHLHIFFRITNIKFSQEALTGSS*LVVSRA
Trigger: GGCCCTGGACACTACCAGGCACGAGCTGCCCGTGAG...CGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp CCTCTTTGCTTGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCTTCGGAGTCACCAGTTCATGCTaGAGGGCGTCTAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLCLPLRRVPAPGQSSFGVTSSC*RASKSC
Trigger: GCAGCTCTTAGACGCCCTGCAGCATGAACTGGTGAC...TCCGAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp CCCGCTTCCTCTGAGAGAGGAGAAGCCTGCGCTTCAGCTCGTGGGCCTTTTTCTGTCACCAGTTCATGCTaGAGGGCGTCTAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PASSERGEACASARGPFSVTSSC*RASKSC
Trigger: GCAGCTCTTAGACGCCCTGCAGCATGAACTGGTGAC...AGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGAAGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp CACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGCTCCCGCTTCCTCTaGGAGAGGAGAAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: HLHIFFRITNIKFSQEALSSRFL*ERRSLR
Trigger: GCGCAGGCTTCTCCTCTCTCAGAGGAAGCGGGAGCT...CAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp CAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGATTTGTGGGGCCGGTTaGAGGCTTCCCAGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: QHLHIFFRITNIKFSQEAICGAG*RLPSAS
Trigger: CGAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAAT...CGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp TCCTCTGAGAGAGGAGAAGCCTGCGCTTCAGCTCGTGGGCCTTTTTCTGTAGCTGAGATCCAGGTCAGGTaGAGCTGTGCCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSERGEACASARGPFSVAEIQVR*SCAMPF
Trigger: GAAGGGCATGGCACAGCTCCACCTGACCTGGATCTC...AGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp TCCTCTGAGAGAGGAGAAGCCTGCGCTTCAGCTCGTGGGCCTTTTTCTGTAGCTTCCTGTATTGCTCCTTaGAGCGTGTGGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SSERGEACASARGPFSVASCIAP*SVWPLP
Trigger: AGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGA...AGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp CACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGGAAGCGTGTGGCCACTaGCTCGAAGGGGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: HLHIFFRITNIKFSQEALEACGH*LEGAEH
Trigger: ATGCTCAGCCCCTTCGAGGCAGTGGCCACACGCTTC...CAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp ATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACCTGCCTCGAAGGGGCTaGGCATCTCGATCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: IFFRITNIKFSQEALSGHLPRRG*ASRSGH
Trigger: ATGCCCAGATCGAGATGCTCAGCCCCTTCGAGGCAG...GTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp TGGTTTGCCAAGGCTGCCTCTTTGCTTGCCTCTGCGGAGAGTTCCAGCACCTGGCCTTTCCGACCCCACTaGTATCTGCTTTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: WFAKAASLLASAESSSTWPFRPH*YLLCFS
Trigger: AGAAAAGCAAAGCAGATAGCAGTGGGGTCGGAAAGG...CCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp TCCTCTGAGAGAGGAGAAGCCTGCGCTTCAGCTCGTGGGCCTTTTTCTGTAGCTGCGAATGTCCTGTATTaGTCCTTGAAGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSERGEACASARGPFSVAANVLY*SLKRVA
Trigger: GGCCACACGCTTCAAGGAGCAATACAGGACATTCGC...AGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp AAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGCCATCTCCCTCCAGGTaGATGGACCTCACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KSSTCTFSSESPTSSSPRPSPSR*MDLTGS
Trigger: GCTGCCCGTGAGGTCCATCCACCTGGAGGGAGATGG...CCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp CACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGCCAGGAGGCGCTGAGTaGTCACCAGTTCATGCTGCA +
Preference number: 4 (lower is better)
Translates to: HLHIFFRITNIKFSQEALPGGAE*SPVHAA
Trigger: TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGG...CAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp CGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTAGCTCCCGCTTCCTCTaGGAGAGGAGAAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RSVSPAPAHFLPNHQHQVSSRFL*ERRSLR
Trigger: GCGCAGGCTTCTCCTCTCTCAGAGGAAGCGGGAGCT...AACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp GCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTTCGCCGTCACGTCCTTaGGTTCGCTCAGTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: APAHFLPNHQHQVLPGGASPSRP*VRSVSP
Trigger: TGGACTTACTGAGCGAACTCAAGGACGTGACGGCGA...AGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGCCTGAGCGGGGGCTaGCGAGGCACCCGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGLSGG*RGTRVV
Trigger: GACAACCCGGGTGCCTCGTCAGCCCCCGCTCAGGCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp TGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCTTCGGAGCTCAAGGTCGTCTTCTTTTCATACTaGAGATACCGGGACTCAATC +
Preference number: 4 (lower is better)
Translates to: CLCGEFQHLGKAPSELKVVFFSY*RYRDSI
Trigger: GATTGAGTCCCGGTATCTGCAGTATGAAAAGAAGAC...GACCTTGAGCTCCGAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp TCCAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCAGTAAGTCCAGCACCTaGACATTTTCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: SRAVANVLYCSLKRVATASKSST*TFSSES
Trigger: TGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACT...GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp TTCGCCGTCACGTCCTTGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTCTCTTTGCTTGCCTCTaGGGAGAGTTCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: FAVTSLSSLSKSSTCTFSLFACL*GEFQHL
Trigger: CAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAG...AGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CCA 90 bp ATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACGCCCTTCCAGCAACGTaGACTGCAGGTCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: IFFRITNIKFSQEALSGHALPAT*TAGHPF
Trigger: GAAAGGGTGACCTGCAGTCCACGTTGCTGGAAGGGC...GTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp AAAGCTCCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTTGAGTTCGCTCTGCGCTTCAGCTCGTaGGCCTTTTTCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: KAPSELKVLFRRHVLEFALRFSS*AFFCSF
Trigger: GAAGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAG...AGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CCA 90 bp GCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTCTGAGCATCTCGATCTaGGCATCCAGGACATCTGCC +
Preference number: 4 (lower is better)
Translates to: APAHFLPNHQHQVLPGGALSISI*ASRTSA
Trigger: GGCAGATGTCCTGGATGCCCAGATCGAGATGCTCAG...AGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
3UTR CAA 72 bp CTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTaGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTT +
Preference number: 4 (lower is better)
Translates to: LRSSRSFFAVTS*SSLSKSSTCTF
Trigger: AAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR TCA 90 bp CGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTTCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: RSVSPAPAHFLPNHQHQVSPRRR*VVTSSC
Trigger: GCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGA...AACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGCCTGAGCGGGGGCTaGCGAGGCACCCGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGLSGG*RGTRVV
Trigger: GACAACCCGGGTGCCTCGTCAGCCCCCGCTCAGGCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp CGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTGAGAGAGGAGAAGCCTaGGCTTCAGCTCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RSVSPAPAHFLPNHQHQVERGEA*ASARGP
Trigger: AGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTC...AACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp CTTCTTTCAAACTCAGCAAGATTGTTCTCCATCTTTACGGATAGTAGCGTCAGCCTCACGGGCAGCTCGTaGCTGGTAGTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLSNSARLFSIFTDSSVSLTGSS*LVVSRA
Trigger: GGCCCTGGACACTACCAGGCACGAGCTGCCCGTGAG...GCTGACGCTACTATCCGTAAAGATGGAGAACAATCTTGCTGAGTTTGAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp GATTGTTCTCCATCTTTACGGATAGTAGCGTCAGCAGTAGTGTCTGAGACTCCAAGGGCGTCTAAGAGCTaGTGCCCATCTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DCSPSLRIVASAVVSETPRASKS*CPSPSR
Trigger: CCTGGAGGGAGATGGGCAGCAGCTCTTAGACGCCCT...TGGAGTCTCAGACACTACTGCTGACGCTACTATCCGTAAAGATGGAGAACAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp ATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACGTGGTCACCAGTTCATaGTGCAGGGCGTCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: IFFRITNIKFSQEALSGHVVTSS*CRASKS
Trigger: GCTCTTAGACGCCCTGCAGCATGAACTGGTGACCAC...GTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp TCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCGGTGGAGCTGTGCCATaGCCTTCCAGCAACGTGGAC +
Preference number: 4 (lower is better)
Translates to: SVSPAPAHFLPNHQHQVLGGAVP*PSSNVD
Trigger: GTCCACGTTGCTGGAAGGGCATGGCACAGCTCCACC...GAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp TCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCGAAGCGTGTGGCCACTaGCTCGAAGGGGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: SVSPAPAHFLPNHQHQVLEACGH*LEGAEH
Trigger: ATGCTCAGCCCCTTCGAGGCAGTGGCCACACGCTTC...GAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp GACTCCATCATTTCCATTGCTTCAGATAAATCCGGGCTCTTTTTCCGAGGGGCAGTGGTCACCAGTTCATaGTGCAGGGCGTCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: DSIISIASDKSGLFFRGAVVTSS*CRASKS
Trigger: GCTCTTAGACGCCCTGCAGCATGAACTGGTGACCAC...TGCCCCTCGGAAAAAGAGCCCGGATTTATCTGAAGCAATGGAAATGATGGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp AAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGCTGGTTTGCCAAGGCTaGCTCTTTGCTTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSSTCTFSSESPTSSSPRLVCQG*LFACLC
Trigger: GCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCAG...CCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp CACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACCAGTTCATGCTGCAGACCCCACTGCTATCTaGTTTTGGGTTGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HQHQVLPGGAEWSPVHAADPTAI*FWVVFF
Trigger: AAAGAAGACAACCCAAAAGCAGATAGCAGTGGGGTC...TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601564.5
CDS-3UTR CCA 90 bp TCAGCAGTAGTGTCTGAGACTCCATCATTTCCATTGCTTCAGATAAATCCGGGCGCCCTTCCAGCAACGTaGACTGCAGGTCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: SAVVSETPSFPLLQINPGALPAT*TAGHPF
Trigger: GAAAGGGTGACCTGCAGTCCACGTTGCTGGAAGGGC...GCCCGGATTTATCTGAAGCAATGGAAATGATGGAGTCTCAGACACTACTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTGATGAACGTGGCCTaGGCGGGGGCTGACGAGGCA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLMNVA*AGADEA
Trigger: TGCCTCGTCAGCCCCCGCTCAGGCCACGTTCATCAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTCACGGGCAGCTCGTaGCTGGTAGTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLTGSS*LVVSRA
Trigger: GGCCCTGGACACTACCAGGCACGAGCTGCCCGTGAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp TCAGCAGTAGTGTCTGAGACTCCATCATTTCCATTGCTTCAGATAAATCCGGGCCCAAGGCTGCCTCTTTaGTTGCCTCTGCGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SAVVSETPSFPLLQINPGPRLPL*LPLRRV
Trigger: AACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGG...GCCCGGATTTATCTGAAGCAATGGAAATGATGGAGTCTCAGACACTACTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCGGACCCGCCCCCTTaGTTGCGGGTCGGACCATTT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPDPPP*LRVGPF
Trigger: AAATGGTCCGACCCGCAAGCAAGGGGGCGGGTCCGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGGGGCGCCATGCCCTaGGTCTCTTCCCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGGAMP*VSSQTS
Trigger: GGAAGTCTGGGAAGAGACCCAGGGCATGGCGCCCCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGAGACGCAGGAGGGGTaGCTGCGAGGCGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNETQEG*LRGVRQ
Trigger: CTGCCTCACGCCTCGCAGCCACCCCTCCTGCGTCTC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCAAAGGCGGCTCCACTaGTCCCTGCGGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHQRRLH*SLRPPP
Trigger: AGGAGGTGGCCGCAGGGACCAGTGGAGCCGCCTTTG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGAGGGGCAAGTGGATaGGCAAGTGGAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGGASG*ASGGAG
Trigger: CCCTGCCCCTCCACTTGCCCATCCACTTGCCCCTCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593360.1
3UTR CAA 72 bp GCGTCAGCAGTAGTGTCTGAGACTCCATCATTTCCATaGCTTCAGATAAATCCGGGCTCTTTTTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ASAVVSETPSFP*LQINPGSFSEG
Trigger: CCCCTCGGAAAAAGAGCCCGGATTTATCTGAAGCAATGGAAATGATGGAGTCTCAGACACTACTGCTGACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAGCTCCCGCTTCCTCTaGGAGAGGAGAAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSSRFL*ERRSLR
Trigger: GCGCAGGCTTCTCCTCTCTCAGAGGAAGCGGGAGCT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTGATGAACGTGGCCTaGGCGGGGGCTGACGAGGCA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLMNVA*AGADEA
Trigger: TGCCTCGTCAGCCCCCGCTCAGGCCACGTTCATCAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGAATGGGCTCCTGGGTaGACCTGCTGCGACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHEWAPG*TCCDLR
Trigger: CCTCAGGTCGCAGCAGGTTCACCCAGGAGCCCATTC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTCACTTTGGGAGGCTaGGGCTGGCGGATCACGAGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLTLGG*GWRITR
Trigger: CCTCGTGATCCGCCAGCCTCAGCCTCCCAAAGTGAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATATTTGTGGGGCCGGTTaGAGGCTTCCCAGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHICGAG*RLPSAS
Trigger: CGAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAAT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253669.10
ENST00000448593.6
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTCACGGGCAGCTCGTaGCTGGTAGTGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLTGSS*LVVSRA
Trigger: GGCCCTGGACACTACCAGGCACGAGCTGCCCGTGAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCAAATGTTCGCCAGGTaGCAGCAGCTGCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHQMFAR*QQLRSP
Trigger: GGGCGAGCGCAGCTGCTGGCACCTGGCGAACATTTG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTCCCTCCAGGTGGATaGACCTCACGGGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLPPGG*TSRAAR
Trigger: ACGAGCTGCCCGTGAGGTCCATCCACCTGGAGGGAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCATCTCCCTCCAGGTaGATGGACCTCACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPSPSR*MDLTGS
Trigger: GCTGCCCGTGAGGTCCATCCACCTGGAGGGAGATGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGGGGCGCCATGCCCTaGGTCTCTTCCCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGGAMP*VSSQTS
Trigger: GGAAGTCTGGGAAGAGACCCAGGGCATGGCGCCCCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTCCTCCCCTCGCACTTaGTCTCGCCCACCATCGGCG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNSSPRT*SRPPSA
Trigger: CGCCGATGGTGGGCGAGACCAAGTGCGAGGGGAGGA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGGTCGGACCATTTGTaGAGACGCAGGAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGSDHL*RRRRGG
Trigger: GCCACCCCTCCTGCGTCTCCACAAATGGTCCGACCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAAGTGGATGGGCAAGTaGAGGGGCAGGGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHKWMGK*RGRAKA
Trigger: GGCCTTGGCCCTGCCCCTCCACTTGCCCATCCACTT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTTCCCTCGGGTCTGTaGCCCATCTCCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLPSGL*PISCRS
Trigger: GCTCCTGCAGGAGATGGGTCACAGACCCGAGGGAAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGCTCCCGCTTCCTCTaGGAGAGGAGAAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNSSRFL*ERRSLR
Trigger: GCGCAGGCTTCTCCTCTCTCAGAGGAAGCGGGAGCT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSPRRR*VVTSSC
Trigger: GCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACATTTGTGGGGCCGGTTaGAGGCTTCCCAGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNICGAG*RLPSAS
Trigger: CGAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAAT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253669.10
ENST00000448593.6
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGTGGAGCTGTGCCATaGCCTTCCAGCAACGTGGAC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGGAVP*PSSNVD
Trigger: GTCCACGTTGCTGGAAGGGCATGGCACAGCTCCACC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGAGAGAGGAGAAGCCTaGGCTTCAGCTCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHERGEA*ASARGP
Trigger: AGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAGGGCGTCTAAGAGCTaGTGCCCATCTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHRASKS*CPSPSR
Trigger: CCTGGAGGGAGATGGGCAGCAGCTCTTAGACGCCCT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp CACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTAAGTCCAGCACCTaGACATTTTCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: HLHIFFRITNIKFSQEALSKSST*TFSSES
Trigger: TGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACT...CAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACACCCGCCCCCTTGCTTaGGGGTCGGACCATTTGTGG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNTRPLA*GSDHLW
Trigger: CCACAAATGGTCCGACCCGCAAGCAAGGGGGCGGGT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTCCCTCCAGGTGGATaGACCTCACGGGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLPPGG*TSRAAR
Trigger: ACGAGCTGCCCGTGAGGTCCATCCACCTGGAGGGAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCATCTCCCTCCAGGTaGATGGACCTCACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPSPSR*MDLTGS
Trigger: GCTGCCCGTGAGGTCCATCCACCTGGAGGGAGATGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGCAGGTACCTCACTTTaGGAGGCTGAGGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHAGTSL*EAEAGG
Trigger: TCCGCCAGCCTCAGCCTCCCAAAGTGAGGTACCTGC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGGAGCAGCCAGCCCTaGTCACCTGGGCAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNRSSQP*SPGQEG
Trigger: GCCTTCTTGCCCAGGTGACCAGGGCTGGCTGCTCCT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTGCCTCGAAGGGGCTaGGCATCTCGATCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLPRRG*ASRSGH
Trigger: ATGCCCAGATCGAGATGCTCAGCCCCTTCGAGGCAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNSPRRR*VVTSSC
Trigger: GCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCAAGGGGCGGTGGAGTaGTTCCTCTTGCTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHQGAVE*FLLLAN
Trigger: ATTGGCCAGCAAGAGGAATCACTCCACCGCCCCTTG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCCAGGACCCCAAAGTaGGACCCAGACAATGTTGGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPRTPK*DPDNVG
Trigger: CCCAACATTGTCTGGGTCTCACTTTGGGGTCCTGGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGTGCCTCTGCTAGTTaGAGCTCAGACAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGASAS*SSDSPV
Trigger: GACTGGGCTGTCTGAGCTTCAACTAGCAGAGGCACC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTCCAGCAACGTGGACTaGAGGTCACCCTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSSNVD*RSPFPT
Trigger: GGTCGGAAAGGGTGACCTGCAGTCCACGTTGCTGGA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGTGGAGCTGTGCCATaGCCTTCCAGCAACGTGGAC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGGAVP*PSSNVD
Trigger: GTCCACGTTGCTGGAAGGGCATGGCACAGCTCCACC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGAGAGAGGAGAAGCCTaGGCTTCAGCTCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNERGEA*ASARGP
Trigger: AGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGAAGCGTGTGGCCACTaGCTCGAAGGGGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNEACGH*LEGAEH
Trigger: ATGCTCAGCCCCTTCGAGGCAGTGGCCACACGCTTC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGGGCGTCTAAGAGCTaGTGCCCATCTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNRASKS*CPSPSR
Trigger: CCTGGAGGGAGATGGGCAGCAGCTCTTAGACGCCCT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGCTGCCTCTTTGCTTaGCTCTGCGGAGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGCLFA*LCGEFQ
Trigger: CTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGGCGTGTTCTTGGGTaGTCCCCCAGATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGRVLG*SPRFSA
Trigger: TGCAGAGAATCTGGGGGAGCACCCAAGAACACGCCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGGCACTGTAACTCCTaGTCCCATCACCAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGHCNS*SHHQRR
Trigger: CCGCCTTTGGTGATGGGAGCAGGAGTTACAGTGCCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGCCTGCAGGAGCCTTTTaGGTTGTCTTCTTTTCATAC +
Preference number: 4 (lower is better)
Translates to: KSSTCTFSSESPTSSSPRPAGAF*VVFFSY
Trigger: GTATGAAAAGAAGACAACCCAAAAGGCTCCTGCAGG...CCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGCCCTTCCAGCAACGTaGACTGCAGGTCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHALPAT*TAGHPF
Trigger: GAAAGGGTGACCTGCAGTCCACGTTGCTGGAAGGGC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGAGATCCAGGTCAGGTaGAGCTGTGCCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHEIQVR*SCAMPF
Trigger: GAAGGGCATGGCACAGCTCCACCTGACCTGGATCTC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp CTTCTTTCAAACTCAGCAAGATTGTTCTCCATCTTTACGGATAGTAGCGTCAGCCTGCGCTTCAGCTCGTaGGCCTTTTTCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLSNSARLFSIFTDSSVSLRFSS*AFFCSF
Trigger: GAAGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAG...GCTGACGCTACTATCCGTAAAGATGGAGAACAATCTTGCTGAGTTTGAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCAGGAGGCGCTGAGTaGTCACCAGTTCATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPGGAE*SPVHAA
Trigger: TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATACAGGGGCGTGTTCTTaGGTGCTCCCCCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHTGACS*VLPQIL
Trigger: GAGAATCTGGGGGAGCACCCAAGAACACGCCCCTGT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTACGGCAAGGGGCGGTaGAGTGATTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHYGKGR*SDSSCW
Trigger: CCAGCAAGAGGAATCACTCCACCGCCCCTTGCCGTA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAACCGAATGGGCTCCTaGGTGAACCTGCTGCGACCT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHNRMGS*VNLLRP
Trigger: AGGTCGCAGCAGGTTCACCCAGGAGCCCATTCGGTT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAATGAGCTGGGGTGGTaGCATGCGCCTGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHNELGW*HAPVVP
Trigger: AGGGACTACAGGCGCATGCCACCACCCCAGCTCATT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGCAGGTACGAGGAGTaGTCCCAGCAGGTACCTCAC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGRYEE*SQQVPH
Trigger: GTGAGGTACCTGCTGGGACCACTCCTCGTACCTGCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTCCTGTATTGCTCCTTaGAGCGTGTGGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSCIAP*SVWPLP
Trigger: AGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTCGCCGTCACGTCCTTaGGTTCGCTCAGTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSPSRP*VRSVSP
Trigger: TGGACTTACTGAGCGAACTCAAGGACGTGACGGCGA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAGGCACTGTCTTGATTaGAATACCACCGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHRHCLD*NTTGWG
Trigger: CCCCCAGCCGGTGGTATTTCAATCAAGACAGTGCCT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp CGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTGTGGGGACACACTTaGACTCTTTTATCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RSVSPAPAHFLPNHQHQVLWGHT*TLLSFF
Trigger: GAAGAAGGATAAAAGAGTTCAAGTGTGTCCCCACAG...AACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTCCAGCAACGTGGACTaGAGGTCACCCTTTCCGACC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNSSNVD*RSPFPT
Trigger: GGTCGGAAAGGGTGACCTGCAGTCCACGTTGCTGGA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGTCACCAGTTCATGCTaGAGGGCGTCTAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHVTSSC*RASKSC
Trigger: GCAGCTCTTAGACGCCCTGCAGCATGAACTGGTGAC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGTGGTCACCAGTTCATaGTGCAGGGCGTCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHVVTSS*CRASKS
Trigger: GCTCTTAGACGCCCTGCAGCATGAACTGGTGACCAC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTCTTTGCTTGCCTCTaGGGAGAGTTCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLFACL*GEFQHL
Trigger: CAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGCTGCCTCTTTGCTTaGCTCTGCGGAGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGCLFA*LCGEFQ
Trigger: CTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCAAGGCTGCCTCTTTaGTTGCCTCTGCGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPRLPL*LPLRRV
Trigger: AACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTGGTTTGCCAAGGCTaGCTCTTTGCTTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLVCQG*LFACLC
Trigger: GCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGGCGTGTTCTTGGGTaGTCCCCCAGATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGRVLG*SPRFSA
Trigger: TGCAGAGAATCTGGGGGAGCACCCAAGAACACGCCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGTCCCTACAACCTGTaGGAGCCTCAGCTACTGCAC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGPYNL*EPQLLH
Trigger: GTGCAGTAGCTGAGGCTCGCACAGGTTGTAGGGACC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp CTTCTTTCAAACTCAGCAAGATTGTTCTCCATCTTTACGGATAGTAGCGTCAGCCCTTTCCGACCCCACTaGTATCTGCTTTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLSNSARLFSIFTDSSVSPFRPH*YLLLGC
Trigger: ACAACCCAAAAGCAGATAGCAGTGGGGTCGGAAAGG...GCTGACGCTACTATCCGTAAAGATGGAGAACAATCTTGCTGAGTTTGAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601564.5
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGCCCTTCCAGCAACGTaGACTGCAGGTCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNALPAT*TAGHPF
Trigger: GAAAGGGTGACCTGCAGTCCACGTTGCTGGAAGGGC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGAGATCCAGGTCAGGTaGAGCTGTGCCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNEIQVR*SCAMPF
Trigger: GAAGGGCATGGCACAGCTCCACCTGACCTGGATCTC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTGAGCATCTCGATCTaGGCATCCAGGACATCTGCC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLSISI*ASRTSA
Trigger: GGCAGATGTCCTGGATGCCCAGATCGAGATGCTCAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCAGGAGGCGCTGAGTaGTCACCAGTTCATGCTGCA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPGGAE*SPVHAA
Trigger: TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACACAGGGGCGTGTTCTTaGGTGCTCCCCCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNTGACS*VLPQIL
Trigger: GAGAATCTGGGGGAGCACCCAAGAACACGCCCCTGT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTGACTCATCAGCTGTaGGGGTGCAGGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLTHQL*GCRRGR
Trigger: TCTCCCTCTCCTGCACCCCCACAGCTGATGAGTCAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp CACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGACTGCTATCTGCTTTTaGGTTGTCTTCTTTTCATAC +
Preference number: 4 (lower is better)
Translates to: HLHIFFRITNIKFSQEALTAICF*VVFFSY
Trigger: GTATGAAAAGAAGACAACCCAAAAGCAGATAGCAGT...CAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601564.5
CDS-3UTR TCA 90 bp AAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGATCACTCTTCCACCTTaGACTCTTTTATCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KSSTCTFSSESPTSSSPRITLPP*TLLSFF
Trigger: GAAGAAGGATAAAAGAGTTCAAGGTGGAAGAGTGAT...CCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601564.5
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTCCTGTATTGCTCCTTaGAGCGTGTGGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNSCIAP*SVWPLP
Trigger: AGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTCGCCGTCACGTCCTTaGGTTCGCTCAGTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNSPSRP*VRSVSP
Trigger: TGGACTTACTGAGCGAACTCAAGGACGTGACGGCGA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGGCACTGTCTTGATTaGAATACCACCGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNRHCLD*NTTGWG
Trigger: CCCCCAGCCGGTGGTATTTCAATCAAGACAGTGCCT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTGCAGGCACTGTCTTaGTTGAAATACCACCGGCTG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLQALS*LKYHRL
Trigger: CAGCCGGTGGTATTTCAATCAAGACAGTGCCTGCAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGGCACAGGTTGCAGTaGGCCAAGATCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNRHRLQ*AKITPL
Trigger: CAATGGCGTGATCTTGGCTCACTGCAACCTGTGCCT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAGAGGACAATTTCAGTaGGGGTGGGCCACCTCAACA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHRGQFQ*GWATST
Trigger: TGTTGAGGTGGCCCACCCTCACTGAAATTGTCCTCT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGCGAATGTCCTGTATTaGTCCTTGAAGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHANVLY*SLKRVA
Trigger: GGCCACACGCTTCAAGGAGCAATACAGGACATTCGC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGTCACCAGTTCATGCTaGAGGGCGTCTAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNVTSSC*RASKSC
Trigger: GCAGCTCTTAGACGCCCTGCAGCATGAACTGGTGAC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGTGGTCACCAGTTCATaGTGCAGGGCGTCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNVVTSS*CRASKS
Trigger: GCTCTTAGACGCCCTGCAGCATGAACTGGTGACCAC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTCTTTGCTTGCCTCTaGGGAGAGTTCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLFACL*GEFQHL
Trigger: CAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCAAGGCTGCCTCTTTaGTTGCCTCTGCGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPRLPL*LPLRRV
Trigger: AACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTGGTTTGCCAAGGCTaGCTCTTTGCTTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLVCQG*LFACLC
Trigger: GCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCCCACTGCTATCTTTaGTTTTCTGGAGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPHCYL*FSGAGW
Trigger: CCAGCCTGCTCCAGAAAAGCAAAGATAGCAGTGGGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCAAGATCACGCCATTaGACTCCAGCCAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPRSRH*TPARVT
Trigger: TGTCACCCTGGCTGGAGTGCAATGGCGTGATCTTGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCGGTTGCAGGCTTCCTaGAAGAGAAGAGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHRLQAS*KRRERG
Trigger: ACCTCTCTCTCTTCTCTTGCAGGAAGCCTGCAACCG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATATTTGTGGGGCCGGTTaGAGGCTTCCTGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHICGAG*RLPARE
Trigger: TTCTCTTGCAGGAAGCCTGCAACCGGCCCCACAAAT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTGCGCTTCAGCTCGTaGGCCTTTTTCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLRFSS*AFFCSF
Trigger: GAAGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTGAGCATCTCGATCTaGGCATCCAGGACATCTGCC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLSISI*ASRTSA
Trigger: GGCAGATGTCCTGGATGCCCAGATCGAGATGCTCAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGTCACTTCCCCTCCCTaGGTCTCCATCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNVTSPP*VSIISS
Trigger: TGAGGAGATGATGGAGACCCAGGGAGGGGAAGTGAC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACACTGTGCTAGGGCTGTaGCCTCAAACCGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNTVLGL*PQTEWA
Trigger: AGCCCATTCGGTTTGAGGCCACAGCCCTAGCACAGT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGACCCAGACAATGTTaGGGACACTTCCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNRPRQC*GHFQAT
Trigger: GGTGGCCTGGAAGTGTCCCCAACATTGTCTGGGTCT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAAAAATGAGCTGGGGTaGTGGCATGCGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHKNELG*WHAPVV
Trigger: GACTACAGGCGCATGCCACCACCCCAGCTCATTTTT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTGCAGGCACTGTCTTaGTTGAAATACCACCGGCTG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLQALS*LKYHRL
Trigger: CAGCCGGTGGTATTTCAATCAAGACAGTGCCTGCAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTTCAGCCTGAGCTGGTaGGAAAAGAAGGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHFSLSW*EKKGSK
Trigger: CTTGGATCCCTTCTTTTCTCACCAGCTCAGGCTGAA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTTCAGGGTTTCAGCCTaGGCTGGTGAGAAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHFRVSA*AGEKRR
Trigger: CCTTCTTTTCTCACCAGCTCAGGCTGAAACCCTGAA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGTGAACACCCAAACTaGGAAGAGAGGAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGEHPN*EERRVM
Trigger: CATTACCCTCCTCTCTTCTCAGTTTGGGTGTTCACC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGCGAATGTCCTGTATTaGTCCTTGAAGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNANVLY*SLKRVA
Trigger: GGCCACACGCTTCAAGGAGCAATACAGGACATTCGC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTGCGCTTCAGCTCGTaGGCCTTTTTCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLRFSS*AFFCSF
Trigger: GAAGCTACAGAAAAAGGCCCACGAGCTGAAGCGCAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGCGGGACTTCTGCCTaGCTGCTTGAAGAAAAATCT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGGTSA*LLEEKS
Trigger: AGATTTTTCTTCAAGCAGCCAGGCAGAAGTCCCGCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTACTGCACCTGTACCTaGGAGGTGCTACTGTCAATC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHYCTCT*EVLLSI
Trigger: GATTGACAGTAGCACCTCCCAGGTACAGGTGCAGTA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGGGAGAATCTGGGATaGCTAGGGGTTTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNRENLG*LGVSGF
Trigger: AAACCCTGAAACCCCTAGTCATCCCAGATTCTCCCT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGAAGAACAACATCTTaGCAGGCAGGTACGAGGAGT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGRTTS*QAGTRS
Trigger: ACTCCTCGTACCTGCCTGTCAAGATGTTGTTCTTCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGACTTCTGCCTGGCTaGTTGAAGAAAAATCTTCGC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGLLPG*LKKNLR
Trigger: GCGAAGATTTTTCTTCAAGCAGCCAGGCAGAAGTCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCTGTACCTGGGAGGTaGTACTGTCAATCTATCGGT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPVPGR*YCQSIG
Trigger: ACCGATAGATTGACAGTAGCACCTCCCAGGTACAGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTTTTCTGGAGCAGGCTaGATTTCCTTCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHFSGAG*ISFHLQ
Trigger: CTGAAGGTGGAAGGAAATCCAGCCTGCTCCAGAAAA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAGAAAAATCTTCGCTTaGGCTGATGAACGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHRKIFA*ADERGL
Trigger: CAGGCCACGTTCATCAGCCCAAGCGAAGATTTTTCT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGTCAGCAGTAGTGTCTaGGACTCCATCATTTCCATT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHVSSSV*DSIISI
Trigger: AATGGAAATGATGGAGTCTCAGACACTACTGCTGAC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGCAAGAAGGCATAGGTaGACACCCAAACTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNARRHR*TPKLRR
Trigger: TCTTCTCAGTTTGGGTGTTCACCTATGCCTTCTTGC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCTTTCCGACCCCACTaGTATCTGCTTTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPFRPH*YLLCFS
Trigger: AGAAAAGCAAAGCAGATAGCAGTGGGGTCGGAAAGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253669.10
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGACTTCTGCCTGGCTaGTTGAAGAAAAATCTTCGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGLLPG*LKKNLR
Trigger: GCGAAGATTTTTCTTCAAGCAGCCAGGCAGAAGTCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCTTTCCGACCCCACTaGTATCTTTGCTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPFRPH*YLCFSG
Trigger: TCCAGAAAAGCAAAGATAGCAGTGGGGTCGGAAAGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCTCATGATCATTCATaGCTAGCTCTCGGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPHDHS*LALGQY
Trigger: ATACTGACCGAGAGCTAGGCATGAATGATCATGAGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTGGAGTGATTCCTCTTaGTGGCCAATTTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHWSDSS*WPISLQ
Trigger: CTGAAGTGAAATTGGCCAGCAAGAGGAATCACTCCA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTGCTTTTTCGTCGCTaGAAAACAAAGACGCACAGG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLLFRR*KTKTHR
Trigger: CCTGTGCGTCTTTGTTTTGCAGCGACGAAAAAGCAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCTGCAGGAGCCTTTTaGGTTGTCTTCTTTTCATAC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPAGAF*VVFFSY
Trigger: GTATGAAAAGAAGACAACCCAAAAGGCTCCTGCAGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTTTTCTGGAGCAGGCTaGATTTCCTTCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNFSGAG*ISFHLQ
Trigger: CTGAAGGTGGAAGGAAATCCAGCCTGCTCCAGAAAA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGAAAAATCTTCGCTTaGGCTGATGAACGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNRKIFA*ADERGL
Trigger: CAGGCCACGTTCATCAGCCCAAGCGAAGATTTTTCT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGTCTTCTTTTCATACTaGAGATACCGGGACTCAATC +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHVFFSY*RYRDSI
Trigger: GATTGAGTCCCGGTATCTGCAGTATGAAAAGAAGAC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAGTAAGTCCAGCACCTaGACATTTTCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSKSST*TFSSES
Trigger: TGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCTAACTGTTCACACCTaGTTTTTCGTCGCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHLTVHT*FFVAAK
Trigger: TTTTGCAGCGACGAAAAAGCAGGTGTGAACAGTTAG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCTGCAGGAGCCTTTTaGGTTGTCTTCTTTTCATAC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPAGAF*VVFFSY
Trigger: GTATGAAAAGAAGACAACCCAAAAGGCTCCTGCAGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTTAAAGGGGACACTTTaGTCGCCCAACACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLKGTL*SPNTCS
Trigger: TGAACAAGTGTTGGGCGACCAAAGTGTCCCCTTTAA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACATCTCCTCAGTAAACTaGGAGCACAGAATAAAGCGC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNISSVN*EHRIKR
Trigger: GCGCTTTATTCTGTGCTCCCAGTTTACTGAGGAGAT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGTAATGAGAGCTCTGTaGAAGAGATCACAGCAGATC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNVMRAL*KRSQQI
Trigger: GATCTGCTGTGATCTCTTCCACAGAGCTCTCATTAC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAGTAAGTCCAGCACCTaGACATTTTCTTCCGAATCA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNSKSST*TFSSES
Trigger: TGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCTTCTTTCTTGTTCATaGTGTGTTACCCTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNLLSCS*CVTLGK
Trigger: CTTGCCTAGGGTAACACACCATGAACAAGAAAGAAG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAGTGATTCCTCTTGCTaGCCAATTTCACTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSDSSC*PISLQF
Trigger: AAACTGAAGTGAAATTGGCCAGCAAGAGGAATCACT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR TCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACATCACTCTTCCACCTTaGACTCTTTTATCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNITLPP*TLLSFF
Trigger: GAAGAAGGATAAAAGAGTTCAAGGTGGAAGAGTGAT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR GCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCAACACTTGTTCACTaGATAACGATAATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPTLVH*ITIIPR
Trigger: TCTTGGAATTATCGTTATGCAGTGAACAAGTGTTGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CCA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACATCTCAAATTATCCCTaGGTTCATTCATTCACCAGA +
Preference number: 4 (lower is better)
Translates to: NSYSATVVYKVLKYPECNISNYP*VHSFTR
Trigger: TCTGGTGAATGAATGAACCCAGGGATAATTTGAGAT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 90 bp CCCCCTTGCTTGCGGGTCGGACCATTTGTGGAGACGCAGGAGGGGTaGCTGCGAGGCGTGAGGCAGCGCCGGCTAAGTGTGGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: PPCLRVGPFVETQEG*LRGVRQRRLSVESA
Trigger: CGCGCTCTCCACACTTAGCCGGCGCTGCCTCACGCCTCGCAGCCACCCCTCCTGCGTCTCCACAAATGGTCCGACCCGCAAGCAAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS CCA 90 bp TCCCAGGAGGCGCTGAGTGGTCACCAGTTCATGCTGCAGGGCGTCTaGAGGGGAAGAGGGATGGTGGGCGATGGATGGCAAGGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: SQEALSGHQFMLQGV*RGRGMVGDGWQGAP
Trigger: TGGGGCACCTTGCCATCCATCGCCCACCATCCCTCTTCCCCTCCAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597479.1
ENST00000597917.1
CDS CCA 90 bp GGTGGGCGATGGATGGCAAGGTGCCCCACGCAAGGCACACACAAGTaGAGCGGCCGACAGACTTCTGTCATGATGCTCGGCTATCGCGCT +
Preference number: 5 (lower is better)
Translates to: GGRWMARCPTQGTHK*SGRQTSVMMLGYRA
Trigger: AGCGCGATAGCCGAGCATCATGACAGAAGTCTGTCGGCCGCTCCACTTGTGTGTGCCTTGCGTGGGGCACCTTGCCATCCATCGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597479.1
ENST00000597917.1
CDS CCA 90 bp GTGGTCACCAGTTCATGCTGCAGGGCGTCTGGAGGGGAAGAGGGATaGTGGGCGATGGATGGCAAGGTGCCCCACGCAAGGCACACACAA +
Preference number: 5 (lower is better)
Translates to: VVTSSCCRASGGEEG*WAMDGKVPHARHTQ
Trigger: TTGTGTGTGCCTTGCGTGGGGCACCTTGCCATCCATCGCCCACCATCCCTCTTCCCCTCCAGACGCCCTGCAGCATGAACTGGTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597479.1
ENST00000597917.1
CDS TCA 90 bp CCACGCAAGGCACACACAAGTGGAGCGGCCGACAGACTTCTGTCATaGTGCTCGGCTATCGCGCTGGAACCGTGGAGAGCGCACAGGGAA +
Preference number: 5 (lower is better)
Translates to: PRKAHTSGAADRLLS*CSAIALEPWRAHRE
Trigger: TTCCCTGTGCGCTCTCCACGGTTCCAGCGCGATAGCCGAGCATCATGACAGAAGTCTGTCGGCCGCTCCACTTGTGTGTGCCTTGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 90 bp TGGCTGCTTGAAGAAAAATCTTCGCTTGGGCTGATGAACGTGGCCTaGGCGGGGGCTGACGAGGCACCCGGGTTGTCGTCCTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: WLLEEKSSLGLMNVA*AGADEAPGLSSSDR
Trigger: CCTGTCTGAGGACGACAACCCGGGTGCCTCGTCAGCCCCCGCTCAGGCCACGTTCATCAGCCCAAGCGAAGATTTTTCTTCAAGCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS CCA 90 bp GGGGTCCCTACAACCTGTGCGAGCCTCAGCTACTGCACCTGTACCTaGGAGGTGCTACTGTCAATCTATCGGTTACGGCAAGGGGCGGTG +
Preference number: 5 (lower is better)
Translates to: GVPTTCASLSYCTCT*EVLLSIYRLRQGAV
Trigger: CACCGCCCCTTGCCGTAACCGATAGATTGACAGTAGCACCTCCCAGGTACAGGTGCAGTAGCTGAGGCTCGCACAGGTTGTAGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CAA 90 bp CCTCTTTGCTTGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCTTCGGAGCCAAGGCTGCCTCTTaGCTTGCCTCTGCGGAGAGT +
Preference number: 5 (lower is better)
Translates to: PLCLPLRRVPAPGQSSFGAKAAS*LASAES
Trigger: ACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGC...TCCGAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS TCA 90 bp ACTACCCAAGAAGCACAGGGAAGCCGGCGAGGTGCCTCTGCTAGTTaGAGCTCAGACAGCCCAGTCCAAGGGCTGCCAGAGGACAATTTC +
Preference number: 5 (lower is better)
Translates to: TTQEAQGSRRGASAS*SSDSPVQGLPEDNF
Trigger: GAAATTGTCCTCTGGCAGCCCTTGGACTGGGCTGTCTGAGCTTCAACTAGCAGAGGCACCTCGCCGGCTTCCCTGTGCTTCTTGGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS GCA 90 bp CGAGGCACCCGGGTTGTCGTCCTCAGACAGGGGCGTGTTCTTGGGTaGTCCCCCAGATTCTCTGCAGGCACTGTCTTGATTGAAATACCA +
Preference number: 5 (lower is better)
Translates to: RGTRVVVLRQGRVLG*SPRFSAGTVLIEIP
Trigger: TGGTATTTCAATCAAGACAGTGCCTGCAGAGAATCTGGGGGAGCACCCAAGAACACGCCCCTGTCTGAGGACGACAACCCGGGTGCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS GCA 90 bp CTACAACCTGTGCGAGCCTCAGCTACTGCACCTGTACCTGGGAGGTaGTACTGTCAATCTATCGGTTACGGCAAGGGGCGGTGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: LQPVRASATAPVPGR*YCQSIGYGKGRWSD
Trigger: ATCACTCCACCGCCCCTTGCCGTAACCGATAGATTGACAGTAGCACCTCCCAGGTACAGGTGCAGTAGCTGAGGCTCGCACAGGTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 90 bp GACAAGTCCCTCCCTGAACGAGAGAGAGAGGGCGGGACTTCTGCCTaGCTGCTTGAAGAAAAATCTTCGCTTGGGCTGATGAACGTGGCC +
Preference number: 5 (lower is better)
Translates to: DKSLPEREREGGTSA*LLEEKSSLGLMNVA
Trigger: GGCCACGTTCATCAGCCCAAGCGAAGATTTTTCTTCAAGCAGCCAGGCAGAAGTCCCGCCCTCTCTCTCTCGTTCAGGGAGGGACTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS TCA 90 bp CACAAGGAGCAGCCAGCCCTGGTCACCTGGGCAAGAAGGCATAGGTaGACACCCAAACTGAGAAGAGAGGAGGGTAATGAGAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: HKEQPALVTWARRHR*TPKLRREEGNESSV
Trigger: CACAGAGCTCTCATTACCCTCCTCTCTTCTCAGTTTGGGTGTTCACCTATGCCTTCTTGCCCAGGTGACCAGGGCTGGCTGCTCCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS TCA 90 bp CCAGACCATGAGCAACTGAAAAACAGTCCTTGTTGCCTGCACCACTaGGCAGAAGGATGCCTGCAACTGCGGGACCTGTGTCACCTGCAC +
Preference number: 5 (lower is better)
Translates to: PDHEQLKNSPCCLHH*AEGCLQLRDLCHLH
Trigger: GTGCAGGTGACACAGGTCCCGCAGTTGCAGGCATCCTTCTGCTCAGTGGTGCAGGCAACAAGGACTGTTTTTCAGTTGCTCATGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 90 bp TGCCAGGGAGAATGCCTGAGGCCTCCAAGCCAGACCATGAGCAACTaGAAAACAGTCCTTGTTGCCTGCACCACTGAGCAGAAGGATGCC +
Preference number: 5 (lower is better)
Translates to: CQGECLRPPSQTMSN*KTVLVACTTEQKDA
Trigger: GGCATCCTTCTGCTCAGTGGTGCAGGCAACAAGGACTGTTTTTCAGTTGCTCATGGTCTGGCTTGGAGGCCTCAGGCATTCTCCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 90 bp CACCACCCCAACAGTGCAGCCACCAACAGCCCTGAGCAAACAGGGTaGCACCTCTTTCTTAAAGCATTTTCCGAGGTACCTTCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: HHPNSAATNSPEQTG*HLFLKAFSEVPSEL
Trigger: GAGCTCCGAAGGTACCTCGGAAAATGCTTTAAGAAAGAGGTGGCACCCTGTTTGCTCAGGGCTGTTGGTGGCTGCACTGTTGGGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 90 bp TTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTaGTCACCAGTTCATGCTGCAGGGCGTCTGGAGGGGAAGAGGGAT +
Preference number: 5 (lower is better)
Translates to: FLPNHQHQVLPGGAE*SPVHAAGRLEGKRD
Trigger: ATCCCTCTTCCCCTCCAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597479.1
ENST00000597917.1
CDS-3UTR CAA 90 bp CTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTAATTTGTGGGGCCGGTaGCAGGCTTCCCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: LHIFFRITNIKFSQEALSNLWGR*QASQRL
Trigger: GAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAATT...ACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp CACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACCAGTTCATGCTGCATTCGCCGTCACGTCCTaGAGTTCGCTCAGTAAGTCC +
Preference number: 5 (lower is better)
Translates to: HQHQVLPGGAEWSPVHAAFAVTS*SSLSKS
Trigger: GGACTTACTGAGCGAACTCAAGGACGTGACGGCGAA...TGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS TCA 90 bp ACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGCTGCAGGGCGTCTGGAGGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: TFSSESPTSSSPRRR*VVTSSCCRASGGEE
Trigger: CTCTTCCCCTCCAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597479.1
ENST00000597917.1
CDS GCA 90 bp ACCACTGAGCAGAAGGATGCCTGCAACTGCGGGACCTGTGTCACCTaGACTAGGACAACACGCCTCTCTACCCTGACATACATCACATCA +
Preference number: 5 (lower is better)
Translates to: TTEQKDACNCGTCVT*TRTTRLSTLTYITS
Trigger: TGATGTGATGTATGTCAGGGTAGAGAGGCGTGTTGTCCTAGTGCAGGTGACACAGGTCCCGCAGTTGCAGGCATCCTTCTGCTCAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS-3UTR CAA 90 bp GACTCCATCATTTCCATTGCTTCAGATAAATCCGGGCTCTTTTTCCGAGGGGCAAATTTGTGGGGCCGGTaGCAGGCTTCCCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: DSIISIASDKSGLFFRGANLWGR*QASQRL
Trigger: GAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAATT...TGCCCCTCGGAAAAAGAGCCCGGATTTATCTGAAGCAATGGAAATGATGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp AGGCTGCCTCTTTGCTTGCCTCTGCGGAGAGTTCCAGCACCTGGGCAAAGCTCCTCCTGCAGGAGCCTTTaGGGTTGTCTTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: RLPLCLPLRRVPAPGQSSSCRSL*GCLLFI
Trigger: TATGAAAAGAAGACAACCCAAAAGGCTCCTGCAGGA...GGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CAA 90 bp TTCGCCGTCACGTCCTTGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTGTCCTGTATTGCTCCTaGAAGCGTGTGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: FAVTSLSSLSKSSTCTFSVLYCS*KRVATA
Trigger: GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGAC...AGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CAA 90 bp AAAGCTCCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTTGAGTTCGCTGGCGAATGTCCTGTATaGCTCCTTGAAGCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: KAPSELKVLFRRHVLEFAGECPV*LLEACG
Trigger: GCCACACGCTTCAAGGAGCAATACAGGACATTCGCC...AGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS TCA 90 bp CAGCCCTGGTCACCTGGGCAAGAAGGCATAGGTGAACACCCAAACTaGGAAGAGAGGAGGGTAATGAGAGCTCTGTGGAAGAGATCACAG +
Preference number: 5 (lower is better)
Translates to: QPWSPGQEGIGEHPN*EERRVMRALWKRSQ
Trigger: CTGTGATCTCTTCCACAGAGCTCTCATTACCCTCCTCTCTTCTCAGTTTGGGTGTTCACCTATGCCTTCTTGCCCAGGTGACCAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS TCA 90 bp AGCAGAAGCCAAGGAAGACATTCGTCCCTTATCCATCCCGTGCTCTaGGATTGTGGGACAGGCACATCCATCTATCCAGGAGGGCATTGG +
Preference number: 5 (lower is better)
Translates to: SRSQGRHSSLIHPVL*DCGTGTSIYPGGHW
Trigger: CCAATGCCCTCCTGGATAGATGGATGTGCCTGTCCCACAATCTCAGAGCACGGGATGGATAAGGGACGAATGTCTTCCTTGGCTTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 90 bp GTGTCCTCAACAGAAACCAATGCAAATGTGAAAAGGGCTGTGCTGTaGCAGGGAGAATGCCTGAGGCCTCCAAGCCAGACCATGAGCAAC +
Preference number: 5 (lower is better)
Translates to: VSSTETNANVKRAVL*QGECLRPPSQTMSN
Trigger: GTTGCTCATGGTCTGGCTTGGAGGCCTCAGGCATTCTCCCTGGCACAGCACAGCCCTTTTCACATTTGCATTGGTTTCTGTTGAGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 90 bp GAAGAAGCAGAAGCCAAGGAAGACATTCGTCCCTTATCCATCCCGTaGTCTGAGATTGTGGGACAGGCACATCCATCTATCCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: EEAEAKEDIRPLSIP*SEIVGQAHPSIQEG
Trigger: GCCCTCCTGGATAGATGGATGTGCCTGTCCCACAATCTCAGAGCACGGGATGGATAAGGGACGAATGTCTTCCTTGGCTTCTGCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 90 bp CCTGGGAGGTGCTACTGTCAATCTATCGGTTACGGCAAGGGGCGGTaGAGTGATTCCTCTTGCTGGCCAATTTCACTTCAGTTTGCACCT +
Preference number: 5 (lower is better)
Translates to: PGRCYCQSIGYGKGR*SDSSCWPISLQFAP
Trigger: AGGTGCAAACTGAAGTGAAATTGGCCAGCAAGAGGAATCACTCCACCGCCCCTTGCCGTAACCGATAGATTGACAGTAGCACCTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 90 bp AGCCTTTTAAGTGCCGTATCAGCCAGCCTCTTCTCCCTCCGGCTGTaGACCGAATTATGCCCTCCCCAATACGTACGTTTCACTCCAATC +
Preference number: 5 (lower is better)
Translates to: SLLSAVSASLFSLRL*TELCPPQYVRFTPI
Trigger: GATTGGAGTGAAACGTACGTATTGGGGAGGGCATAATTCGGTCCACAGCCGGAGGGAGAAGAGGCTGGCTGATACGGCACTTAAAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 90 bp CCAAGGAAGACATTCGTCCCTTATCCATCCCGTGCTCTGAGATTGTaGGACAGGCACATCCATCTATCCAGGAGGGCATTGGACCAGAAC +
Preference number: 5 (lower is better)
Translates to: PRKTFVPYPSRALRL*DRHIHLSRRALDQN
Trigger: GTTCTGGTCCAATGCCCTCCTGGATAGATGGATGTGCCTGTCCCACAATCTCAGAGCACGGGATGGATAAGGGACGAATGTCTTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS-3UTR CAA 90 bp TCCCTCGGGTCTGTGACCCATCTCCTGCAGGAGCCTTTTGGGTTGTCTTCTTTTCCACTGCTATCTGCTTaGCTTTTCTGGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SLGSVTHLLQEPFGLSSFPLLSA*LFWSRL
Trigger: CAGCCTGCTCCAGAAAAGCAAAGCAGATAGCAGTGG...AAAAGAAGACAACCCAAAAGGCTCCTGCAGGAGATGGGTCACAGACCCGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CAA 90 bp GCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCGAAGACTCCATCATTTCCATaGCTTCAGATAAATCCGGGC +
Preference number: 5 (lower is better)
Translates to: AVANVLYCSLKRVATASKTPSFP*LQINPG
Trigger: GCCCGGATTTATCTGAAGCAATGGAAATGATGGAGT...CTTCGAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS TCA 90 bp GCGGGACCTGTGTCACCTGCACTAGGACAACACGCCTCTCTACCCTaGCATACATCACATCAAGGCCAGTCGTACATGAGAGTCACATTT +
Preference number: 5 (lower is better)
Translates to: AGPVSPALGQHASLP*HTSHQGQSYMRVTF
Trigger: AAATGTGACTCTCATGTACGACTGGCCTTGATGTGATGTATGTCAGGGTAGAGAGGCGTGTTGTCCTAGTGCAGGTGACACAGGTCCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 90 bp CGAGGTACCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTTaGGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: RGTFGAQGPFSPSRP*VRSVSPAPAHFLPN
Trigger: ATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGTACCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS-3UTR CAA 90 bp CAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCAACTGTGGCGTCTTTTaGACGATGCTTTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: QGRGECPVLLLEACGHCLNCGVF*TMLLSL
Trigger: TAATGACAAAAGCATCGTCAAAAAGACGCCACAGTT...GAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp GTCCAGGGCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCGGGCAGAAAATGATGTaGACTCAGGTTTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: VQGRGECPVLLLEACGHCGQKMM*TQVSLI
Trigger: TATCAAAGAAACCTGAGTCAACATCATTTTCTGCCC...GCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGCCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGCCGGACCCGCCCCCTaGCTTGCGGGTCGGACCATT +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHAGPAP*LAGRTI
Trigger: AATGGTCCGACCCGCAAGCAAGGGGGCGGGTCCGGC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CAA 90 bp TGGTTTGCCAAGGCTGCCTCTTTGCTTGCCTCTGCGGAGAGTTCCAGCACCTGGTCAAACTCAGCAAGATaGTTCTCCATCTTTACGGAT +
Preference number: 5 (lower is better)
Translates to: WFAKAASLLASAESSSTWSNSAR*FSIFTD
Trigger: ATCCGTAAAGATGGAGAACAATCTTGCTGAGTTTGA...CCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGACGAGGCACCCGGGTaGTCGTCCTCAGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHDEAPG*SSSDRG
Trigger: GCCCCTGTCTGAGGACGACAACCCGGGTGCCTCGTC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp GCCGTGGCGAATGTCCTGTATTGCTCCTTGAAGCGTGTGGCCACTGCCTCGAAGCTATCTGCTTTTGGGTaGTCTTCTTTTCATACTGCA +
Preference number: 5 (lower is better)
Translates to: AVANVLYCSLKRVATASKLSAFG*SSFHTA
Trigger: TGCAGTATGAAAAGAAGACAACCCAAAAGCAGATAG...CTTCGAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGACATTCGCCACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601564.5
CDS TCA 90 bp ACGCCTCTCTACCCTGACATACATCACATCAAGGCCAGTCGTACATaGGAGTCACATTTTGGGAGCCTTTTAAGTGCCGTATCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: TPLYPDIHHIKASRT*ESHFGSLLSAVSAS
Trigger: GCTGGCTGATACGGCACTTAAAAGGCTCCCAAAATGTGACTCTCATGTACGACTGGCCTTGATGTGATGTATGTCAGGGTAGAGAGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 90 bp GGACCAGAACTGAAATGTCACTCTGGTGTCCTCAACAGAAACCAATaGAAATGTGAAAAGGGCTGTGCTGTGCCAGGGAGAATGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GPELKCHSGVLNRNQ*KCEKGCAVPGRMPE
Trigger: CTCAGGCATTCTCCCTGGCACAGCACAGCCCTTTTCACATTTGCATTGGTTTCTGTTGAGGACACCAGAGTGACATTTCAGTTCTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS-3UTR CAA 90 bp TTCCCTCGGGTCTGTGACCCATCTCCTGCAGGAGCCTTTTGGGTTGTCTTCTTTACTCCATCATTTCCATaGCTTCAGATAAATCCGGGC +
Preference number: 5 (lower is better)
Translates to: FPRVCDPSPAGAFWVVFFTPSFP*LQINPG
Trigger: GCCCGGATTTATCTGAAGCAATGGAAATGATGGAGT...AAAGAAGACAACCCAAAAGGCTCCTGCAGGAGATGGGTCACAGACCCGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CAA 90 bp TCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCGTCCTGTATTGCTCCTaGAAGCGTGTGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: SVSPAPAHFLPNHQHQVLVLYCS*KRVATA
Trigger: GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGAC...GAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGACGAGGCACCCGGGTaGTCGTCCTCAGACAGGGGC +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNDEAPG*SSSDRG
Trigger: GCCCCTGTCTGAGGACGACAACCCGGGTGCCTCGTC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGTCCTCCCCTCGCACTaGGTCTCGCCCACCATCGGC +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNVLPSH*VSPTIG
Trigger: GCCGATGGTGGGCGAGACCAAGTGCGAGGGGAGGAC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS TCA 90 bp TGGGACAGGCACATCCATCTATCCAGGAGGGCATTGGACCAGAACTaGAATGTCACTCTGGTGTCCTCAACAGAAACCAATGCAAATGTG +
Preference number: 5 (lower is better)
Translates to: WDRHIHLSRRALDQN*NVTLVSSTETNANV
Trigger: CACATTTGCATTGGTTTCTGTTGAGGACACCAGAGTGACATTTCAGTTCTGGTCCAATGCCCTCCTGGATAGATGGATGTGCCTGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 90 bp TCTTTTATCCTTCTTCTTGGCACTGCTAGAATTTGTGGGGCCGGTTaGAGGCTTCCTGCAAGAGAAGAGAGAGAGGTCTTGTTCACCTCA +
Preference number: 5 (lower is better)
Translates to: SFILLLGTARICGAG*RLPAREEREVLFTS
Trigger: TGAGGTGAACAAGACCTCTCTCTCTTCTCTTGCAGGAAGCCTGCAACCGGCCCCACAAATTCTAGCAGTGCCAAGAAGAAGGATAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 90 bp TGGGAGCACAGAATAAAGCGCGTGGGAGGATTAAAGGGGACACTTTaGTCGCCCAACACTTGTTCACTGCATAACGATAATTCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: WEHRIKRVGGLKGTL*SPNTCSLHNDNSKS
Trigger: GCTCTTGGAATTATCGTTATGCAGTGAACAAGTGTTGGGCGACCAAAGTGTCCCCTTTAATCCTCCCACGCGCTTTATTCTGTGCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 90 bp TTCTTGTTCATGGTGTGTTACCCTAGGCAAGTCACTTCCCCTCCCTaGGTCTCCATCATCTCCTCAGTAAACTGGGAGCACAGAATAAAG +
Preference number: 5 (lower is better)
Translates to: FLFMVCYPRQVTSPP*VSIISSVNWEHRIK
Trigger: CTTTATTCTGTGCTCCCAGTTTACTGAGGAGATGATGGAGACCCAGGGAGGGGAAGTGACTTGCCTAGGGTAACACACCATGAACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAATTTGTGGGGCCGGTaGCAGGCTTCCCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHNLWGR*QASQRL
Trigger: GAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAATT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253669.10
ENST00000448593.6
CDS-3UTR CAA 90 bp TCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCGGCGAATGTCCTGTATaGCTCCTTGAAGCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: SVSPAPAHFLPNHQHQVLGECPV*LLEACG
Trigger: GCCACACGCTTCAAGGAGCAATACAGGACATTCGCC...GAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTGCGGGTCGGACCATTaGTGGAGACGCAGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHCGSDH*WRRRRG
Trigger: ACCCCTCCTGCGTCTCCACAAATGGTCCGACCCGCA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGACCCGCCCCCTTGCTaGCGGGTCGGACCATTTGTG +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNDPPPC*RVGPFV
Trigger: CACAAATGGTCCGACCCGCAAGCAAGGGGGCGGGTC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CAA 90 bp CACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGCCTGTGGGGACACACTaGAACTCTTTTATCCTTCTT +
Preference number: 5 (lower is better)
Translates to: HLHIFFRITNIKFSQEALPVGTH*NSFILL
Trigger: AAGAAGGATAAAAGAGTTCAAGTGTGTCCCCACAGG...CAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAATTTGTGGGGCCGGTaGCAGGCTTCCCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNNLWGR*QASQRL
Trigger: GAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAATT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253669.10
ENST00000448593.6
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGCCAAGGCTGCCTCTTaGCTTGCCTCTGCGGAGAGT +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHAKAAS*LASAES
Trigger: ACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGACAGGGGCGTGTTCTaGGGTGCTCCCCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHDRGVF*GAPPDS
Trigger: AGAATCTGGGGGAGCACCCAAGAACACGCCCCTGTC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGCCAAGATCACGCCATaGCACTCCAGCCAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHAKITP*HSSQGD
Trigger: GTCACCCTGGCTGGAGTGCAATGGCGTGATCTTGGC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS TCA 90 bp CAAGAGACACTCTCCATTCAAGCCAGGAAACGCAGGCCGTGTTTTTaGACAATACCACTTGCTTCTAAAAGCCCAATTTCGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: QETLSIQARKRRPCF*TIPLASKSPISSKV
Trigger: CACCTTGGACGAAATTGGGCTTTTAGAAGCAAGTGGTATTGTTCAAAAACACGGCCTGCGTTTCCTGGCTTGAATGGAGAGTGTCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595958.1
CDS CCA 90 bp GATGGAGATTTTGTTATCCACAATACAGATGACAATGACACCTGCTaGCCATTCTTGTATCATGCAGCGTCTGGGAAAAGAGCAGCTCGC +
Preference number: 5 (lower is better)
Translates to: DGDFVIHNTDDNDTC*PFLYHAASGKRAAR
Trigger: GCGAGCTGCTCTTTTCCCAGACGCTGCATGATACAAGAATGGCCAGCAGGTGTCATTGTCATCTGTATTGTGGATAACAAAATCTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGTCCTGTATTGCTCCTaGAAGCGTGTGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHVLYCS*KRVATA
Trigger: GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGAC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGCCAAGGCTGCCTCTTaGCTTGCCTCTGCGGAGAGT +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNAKAAS*LASAES
Trigger: ACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTTGGC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGACAGGGGCGTGTTCTaGGGTGCTCCCCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNDRGVF*GAPPDS
Trigger: AGAATCTGGGGGAGCACCCAAGAACACGCCCCTGTC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCACAGGAGCCTTTTGGGTaGTCTTCTTTTCATACTGCA +
Preference number: 5 (lower is better)
Translates to: SSLSKSSTCTFSSESPTSQEPFG*SSFHTA
Trigger: TGCAGTATGAAAAGAAGACAACCCAAAAGGCTCCTG...TGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598517.5
CDS-3UTR CAA 90 bp CTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTCAGGTTTCTTTGATATaGTTTTTGCTAACTGTGGCG +
Preference number: 5 (lower is better)
Translates to: LHIFFRITNIKFSQEALSQVSLI*FLLTVA
Trigger: CGCCACAGTTAGCAAAAACAATATCAAAGAAACCTG...ACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGTCCTGTATTGCTCCTaGAAGCGTGTGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNVLYCS*KRVATA
Trigger: GGCAGTGGCCACACGCTTCAAGGAGCAATACAGGAC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGCGAATGTCCTGTATaGCTCCTTGAAGCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGECPV*LLEACG
Trigger: GCCACACGCTTCAAGGAGCAATACAGGACATTCGCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTTCGCCGTCACGTCCTaGAGTTCGCTCAGTAAGTCC +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHFAVTS*SSLSKS
Trigger: GGACTTACTGAGCGAACTCAAGGACGTGACGGCGAA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGAGACCCAGACAATGTaGGGGACACTTCCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNETQTM*GTLPGH
Trigger: GTGGCCTGGAAGTGTCCCCAACATTGTCTGGGTCTC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CAA 90 bp ATTTTCTTCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTGAGTGGTCACCACTGCTATCTGCTTTaGGGTTGTCTTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: IFFRITNIKFSQEALSGHHCYLL*GCLLFI
Trigger: TATGAAAAGAAGACAACCCAAAAGCAGATAGCAGTG...GTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601564.5
CDS GCA 90 bp TTGGATGGAGATTTTGTTATCCACAATACAGATGACAATGACACCTaGTGGCCATTCTTGTATCATGCAGCGTCTGGGAAAAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LDGDFVIHNTDDNDT*WPFLYHAASGKRAA
Trigger: AGCTGCTCTTTTCCCAGACGCTGCATGATACAAGAATGGCCAGCAGGTGTCATTGTCATCTGTATTGTGGATAACAAAATCTCCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCCACTGCTATCTGCTTaGCTTTTCTGGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHPLLSA*LFWSRL
Trigger: CAGCCTGCTCCAGAAAAGCAAAGCAGATAGCAGTGG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253669.10
ENST00000593360.1
CDS-3UTR CAA 90 bp GACTCCATCATTTCCATTGCTTCAGATAAATCCGGGCTCTTTTTCCGAGGGGCATCAAACTCAGCAAGATaGTTCTCCATCTTTACGGAT +
Preference number: 5 (lower is better)
Translates to: DSIISIASDKSGLFFRGASNSAR*FSIFTD
Trigger: ATCCGTAAAGATGGAGAACAATCTTGCTGAGTTTGA...TGCCCCTCGGAAAAAGAGCCCGGATTTATCTGAAGCAATGGAAATGATGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGCGAATGTCCTGTATaGCTCCTTGAAGCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGECPV*LLEACG
Trigger: GCCACACGCTTCAAGGAGCAATACAGGACATTCGCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATACCCCACTGCTATCTTaGCTTTTCTGGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHTPLLS*LFWSRL
Trigger: CAGCCTGCTCCAGAAAAGCAAAGATAGCAGTGGGGT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGGAAGAACAACATCTaGACAGGCAGGTACGAGGAG +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGKNNI*TGRYEE
Trigger: CTCCTCGTACCTGCCTGTCAAGATGTTGTTCTTCCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAATTTGTGGGGCCGGTaGCAGGCTTCCTGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNNLWGR*QASCKR
Trigger: TCTCTTGCAGGAAGCCTGCAACCGGCCCCACAAATT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCCACTGCTATCTGCTTaGCTTTTCTGGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNPLLSA*LFWSRL
Trigger: CAGCCTGCTCCAGAAAAGCAAAGCAGATAGCAGTGG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253669.10
ENST00000593360.1
CDS-3UTR CAA 90 bp GATTGTTCTCCATCTTTACGGATAGTAGCGTCAGCAGTAGTGTCTGAGACTCCAGGGCAGAAAATGATGTaGACTCAGGTTTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: DCSPSLRIVASAVVSETPGQKMM*TQVSLI
Trigger: TATCAAAGAAACCTGAGTCAACATCATTTTCTGCCC...TGGAGTCTCAGACACTACTGCTGACGCTACTATCCGTAAAGATGGAGAACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTCTGCAGGCACTGTCTaGATTGAAATACCACCGGCT +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSAGTV*IEIPPA
Trigger: AGCCGGTGGTATTTCAATCAAGACAGTGCCTGCAGA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGAAGAGAGAGAGGTCTaGTTCACCTCACTACCCAAG +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHEEREV*FTSLPK
Trigger: CTTGGGTAGTGAGGTGAACAAGACCTCTCTCTCTTC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CAA 90 bp TCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCAACTGTGGCGTCTTTTaGACGATGCTTTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: SVSPAPAHFLPNHQHQVLNCGVF*TMLLSL
Trigger: TAATGACAAAAGCATCGTCAAAAAGACGCCACAGTT...GAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp TCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAATCACCAACATCAAGTTCTCCAGGTTTCTTTGATATaGTTTTTGCTAACTGTGGCG +
Preference number: 5 (lower is better)
Translates to: SVSPAPAHFLPNHQHQVLQVSLI*FLLTVA
Trigger: CGCCACAGTTAGCAAAAACAATATCAAAGAAACCTG...GAGAACTTGATGTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598517.5
ENST00000601564.5
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTCTGCAGGCACTGTCTaGATTGAAATACCACCGGCT +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNSAGTV*IEIPPA
Trigger: AGCCGGTGGTATTTCAATCAAGACAGTGCCTGCAGA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATATTAAAGGGGACACTTaGGTCGCCCAACACTTGTTC +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHIKGDT*VAQHLF
Trigger: GAACAAGTGTTGGGCGACCAAAGTGTCCCCTTTAAT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCAGGAGCCTTTTGGGTaGTCTTCTTTTCATACTGCA +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHQEPFG*SSFHTA
Trigger: TGCAGTATGAAAAGAAGACAACCCAAAAGGCTCCTG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTCCTGCAGGAGCCTTTaGGGTTGTCTTCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSCRSL*GCLLFI
Trigger: TATGAAAAGAAGACAACCCAAAAGGCTCCTGCAGGA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCAGGAGCCTTTTGGGTaGTCTTCTTTTCATACTGCA +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNQEPFG*SSFHTA
Trigger: TGCAGTATGAAAAGAAGACAACCCAAAAGGCTCCTG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACACTCCATCATTTCCATaGCTTCAGATAAATCCGGGC +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNTPSFP*LQINPG
Trigger: GCCCGGATTTATCTGAAGCAATGGAAATGATGGAGT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATAACTGTGGCGTCTTTTaGACGATGCTTTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHNCGVF*TMLLSL
Trigger: TAATGACAAAAGCATCGTCAAAAAGACGCCACAGTT...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATCAGGTTTCTTTGATATaGTTTTTGCTAACTGTGGCG +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHQVSLI*FLLTVA
Trigger: CGCCACAGTTAGCAAAAACAATATCAAAGAAACCTG...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATGGGCAGAAAATGATGTaGACTCAGGTTTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHGQKMM*TQVSLI
Trigger: TATCAAAGAAACCTGAGTCAACATCATTTTCTGCCC...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCATTCAAACTCAGCAAGATaGTTCTCCATCTTTACGGAT +
Preference number: 5 (lower is better)
Translates to: SYSATVVYKVLKYPECNHSNSAR*FSIFTD
Trigger: ATCCGTAAAGATGGAGAACAATCTTGCTGAGTTTGA...ATGGTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAACTGTGGCGTCTTTTaGACGATGCTTTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNNCGVF*TMLLSL
Trigger: TAATGACAAAAGCATCGTCAAAAAGACGCCACAGTT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACCAGGTTTCTTTGATATaGTTTTTGCTAACTGTGGCG +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNQVSLI*FLLTVA
Trigger: CGCCACAGTTAGCAAAAACAATATCAAAGAAACCTG...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACGGGCAGAAAATGATGTaGACTCAGGTTTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNGQKMM*TQVSLI
Trigger: TATCAAAGAAACCTGAGTCAACATCATTTTCTGCCC...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACAATCACTCTTCCACCTaGAACTCTTTTATCCTTCTT +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNNHSST*NSFILL
Trigger: AAGAAGGATAAAAGAGTTCAAGGTGGAAGAGTGATT...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
CDS-3UTR CAA 90 bp AATAGCTACAGTGCTACGGTAGTATATAAAGTGCTCAAGTATCCTGAATGTAACTATTCAACTTCTTTCTaGTTCATGGTGTGTTACCCT +
Preference number: 5 (lower is better)
Translates to: NSYSATVVYKVLKYPECNYSTSF*FMVCYP
Trigger: AGGGTAACACACCATGAACAAGAAAGAAGTTGAATA...GTTACATTCAGGATACTTGAGCACTTTATATACTACCGTAGCACTGTAGCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CAA 72 bp CCCGCCGGCTTTTCAAAGCCGGACCCGCCCCCTTGCTaGCGGGTCGGACCATTTGTGGAGACGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PAGFSKPDPPPC*RVGPFVETQEG
Trigger: CCCCTCCTGCGTCTCCACAAATGGTCCGACCCGCAAGCAAGGGGGCGGGTCCGGCTTTGAAAAGCCGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS TCA 72 bp TTCGCTTGGGCTGATGAACGTGGCCTGAGCGGGGGCTaGCGAGGCACCCGGGTTGTCGTCCTCAGACAGGGG +
Preference number: 6 (lower is better)
Translates to: FAWADERGLSGG*RGTRVVVLRQG
Trigger: CCCCTGTCTGAGGACGACAACCCGGGTGCCTCGTCAGCCCCCGCTCAGGCCACGTTCATCAGCCCAAGCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS GCA 72 bp CGACCCGCCGGCTTTTCAAAGCCGGACCCGCCCCCTTaGTTGCGGGTCGGACCATTTGTGGAGACGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RPAGFSKPDPPP*LRVGPFVETQE
Trigger: CTCCTGCGTCTCCACAAATGGTCCGACCCGCAAGCAAGGGGGCGGGTCCGGCTTTGAAAAGCCGGCGGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS CCA 72 bp TTGCGGGTCGGACCATTTGTGGAGACGCAGGAGGGGTaGCTGCGAGGCGTGAGGCAGCGCCGGCTAAGTGTG +
Preference number: 6 (lower is better)
Translates to: LRVGPFVETQEG*LRGVRQRRLSV
Trigger: CACACTTAGCCGGCGCTGCCTCACGCCTCGCAGCCACCCCTCCTGCGTCTCCACAAATGGTCCGACCCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS CAA 72 bp CCGACCCGCCGGCTTTTCAAAGCCGGACCCGCCCCCTaGCTTGCGGGTCGGACCATTTGTGGAGACGCAGGA +
Preference number: 6 (lower is better)
Translates to: PTRRLFKAGPAP*LAGRTICGDAG
Trigger: TCCTGCGTCTCCACAAATGGTCCGACCCGCAAGCAAGGGGGCGGGTCCGGCTTTGAAAAGCCGGCGGGTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS CCA 72 bp TGTAACTCCTGCTCCCATCACCAAAGGCGGCTCCACTaGTCCCTGCGGCCACCTCCTCTGAAGCAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: CNSCSHHQRRLH*SLRPPPLKQAP
Trigger: GGGAGCCTGCTTCAGAGGAGGTGGCCGCAGGGACCAGTGGAGCCGCCTTTGGTGATGGGAGCAGGAGTTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS TCA 72 bp GAAGAAAAATCTTCGCTTGGGCTGATGAACGTGGCCTaGGCGGGGGCTGACGAGGCACCCGGGTTGTCGTCC +
Preference number: 6 (lower is better)
Translates to: EEKSSLGLMNVA*AGADEAPGLSS
Trigger: GGACGACAACCCGGGTGCCTCGTCAGCCCCCGCTCAGGCCACGTTCATCAGCCCAAGCGAAGATTTTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS TCA 72 bp GCACACACAAGTGGAGCGGCCGACAGACTTCTGTCATaGTGCTCGGCTATCGCGCTGGAACCGTGGAGAGCG +
Preference number: 6 (lower is better)
Translates to: AHTSGAADRLLS*CSAIALEPWRA
Trigger: CGCTCTCCACGGTTCCAGCGCGATAGCCGAGCATCATGACAGAAGTCTGTCGGCCGCTCCACTTGTGTGTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 72 bp CACCCGGGTTGTCGTCCTCAGACAGGGGCGTGTTCTTaGGTGCTCCCCCAGATTCTCTGCAGGCACTGTCTT +
Preference number: 6 (lower is better)
Translates to: HPGCRPQTGACS*VLPQILCRHCL
Trigger: AAGACAGTGCCTGCAGAGAATCTGGGGGAGCACCCAAGAACACGCCCCTGTCTGAGGACGACAACCCGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS CCA 72 bp TGGATGGCAAGGTGCCCCACGCAAGGCACACACAAGTaGAGCGGCCGACAGACTTCTGTCATGATGCTCGGC +
Preference number: 6 (lower is better)
Translates to: WMARCPTQGTHK*SGRQTSVMMLG
Trigger: GCCGAGCATCATGACAGAAGTCTGTCGGCCGCTCCACTTGTGTGTGCCTTGCGTGGGGCACCTTGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597479.1
ENST00000597917.1
CDS GCA 72 bp GGTGGAGCTGTGCCATGCCCTTCCAGCAACGTGGACTaGAGGTCACCCTTTCCGACCCCACTGCTATCTTTG +
Preference number: 6 (lower is better)
Translates to: GGAVPCPSSNVD*RSPFPTPLLSL
Trigger: CAAAGATAGCAGTGGGGTCGGAAAGGGTGACCTGCAGTCCACGTTGCTGGAAGGGCATGGCACAGCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448593.6
CDS GCA 72 bp GTGCGAGCCTCAGCTACTGCACCTGTACCTGGGAGGTaGTACTGTCAATCTATCGGTTACGGCAAGGGGCGG +
Preference number: 6 (lower is better)
Translates to: VRASATAPVPGR*YCQSIGYGKGR
Trigger: CCGCCCCTTGCCGTAACCGATAGATTGACAGTAGCACCTCCCAGGTACAGGTGCAGTAGCTGAGGCTCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CAA 90 bp TGTGGGGCCGGTTGCAGGCTTCCTGCAAGAGAAGAGAGAGAGGTCTaGTTCACCTCACTACCCAAGAAGCACAGGGAAGCCGGCGAGGTG +
Preference number: 6 (lower is better)
Translates to: CGAGCRLPAREEREV*FTSLPKKHREAGEV
Trigger: CACCTCGCCGGCTTCCCTGTGCTTCTTGGGTAGTGAGGTGAACAAGACCTCTCTCTCTTCTCTTGCAGGAAGCCTGCAACCGGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS GCA 72 bp CGGGTTGTCGTCCTCAGACAGGGGCGTGTTCTTGGGTaGTCCCCCAGATTCTCTGCAGGCACTGTCTTGATT +
Preference number: 6 (lower is better)
Translates to: RVVVLRQGRVLG*SPRFSAGTVLI
Trigger: AATCAAGACAGTGCCTGCAGAGAATCTGGGGGAGCACCCAAGAACACGCCCCTGTCTGAGGACGACAACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS CCA 72 bp CCGACAGACTTCTGTCATGATGCTCGGCTATCGCGCTaGAACCGTGGAGAGCGCACAGGGAAGAAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: PTDFCHDARLSR*NRGERTGKKQK
Trigger: CTTCTGCTTCTTCCCTGTGCGCTCTCCACGGTTCCAGCGCGATAGCCGAGCATCATGACAGAAGTCTGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 72 bp TCCGAATCACCAACATCAAGTTCTCCCAGGAGGCGCTaGGTGGTCACCAGTTCATGCTGCAGGGCGTCTGGA +
Preference number: 6 (lower is better)
Translates to: SESPTSSSPRRR*VVTSSCCRASG
Trigger: TCCAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTTGGTGATTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597479.1
ENST00000597917.1
CDS GCA 72 bp GCCAGCCTCTTCTCCCTCCGGCTGTGGACCGAATTATaGCCTCCCCAATACGTACGTTTCACTCCAATCCTC +
Preference number: 6 (lower is better)
Translates to: ASLFSLRLWTEL*PPQYVRFTPIL
Trigger: GAGGATTGGAGTGAAACGTACGTATTGGGGAGGGCATAATTCGGTCCACAGCCGGAGGGAGAAGAGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 72 bp CAGAAGGATGCCTGCAACTGCGGGACCTGTGTCACCTaGACTAGGACAACACGCCTCTCTACCCTGACATAC +
Preference number: 6 (lower is better)
Translates to: QKDACNCGTCVT*TRTTRLSTLTY
Trigger: GTATGTCAGGGTAGAGAGGCGTGTTGTCCTAGTGCAGGTGACACAGGTCCCGCAGTTGCAGGCATCCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 72 bp GGGAAGAACAACATCTTGACAGGCAGGTACGAGGAGTaGTCCCAGCAGGTACCTCACTTTGGGAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: GKNNILTGRYEE*SQQVPHFGRLR
Trigger: CCTCAGCCTCCCAAAGTGAGGTACCTGCTGGGACCACTCCTCGTACCTGCCTGTCAAGATGTTGTTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 72 bp CTCAACAGGAAAAGGGACACAAGGAGCAGCCAGCCCTaGTCACCTGGGCAAGAAGGCATAGGTGAACACCCA +
Preference number: 6 (lower is better)
Translates to: LNRKRDTRSSQP*SPGQEGIGEHP
Trigger: TGGGTGTTCACCTATGCCTTCTTGCCCAGGTGACCAGGGCTGGCTGCTCCTTGTGTCCCTTTTCCTGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 72 bp AGTGCCGTATCAGCCAGCCTCTTCTCCCTCCGGCTGTaGACCGAATTATGCCCTCCCCAATACGTACGTTTC +
Preference number: 6 (lower is better)
Translates to: SAVSASLFSLRL*TELCPPQYVRF
Trigger: GAAACGTACGTATTGGGGAGGGCATAATTCGGTCCACAGCCGGAGGGAGAAGAGGCTGGCTGATACGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 72 bp ACGAGAGAGAGAGGGCGGGACTTCTGCCTGGCTGCTTaGAGAAAAATCTTCGCTTGGGCTGATGAACGTGGC +
Preference number: 6 (lower is better)
Translates to: TRERGRDFCLAA*RKIFAWADERG
Trigger: GCCACGTTCATCAGCCCAAGCGAAGATTTTTCTTCAAGCAGCCAGGCAGAAGTCCCGCCCTCTCTCTCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS TCA 72 bp CAGCCAGCCCTGGTCACCTGGGCAAGAAGGCATAGGTaGACACCCAAACTGAGAAGAGAGGAGGGTAATGAG +
Preference number: 6 (lower is better)
Translates to: QPALVTWARRHR*TPKLRREEGNE
Trigger: CTCATTACCCTCCTCTCTTCTCAGTTTGGGTGTTCACCTATGCCTTCTTGCCCAGGTGACCAGGGCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 72 bp CTCCCTGAACGAGAGAGAGAGGGCGGGACTTCTGCCTaGCTGCTTGAAGAAAAATCTTCGCTTGGGCTGATG +
Preference number: 6 (lower is better)
Translates to: LPEREREGGTSA*LLEEKSSLGLM
Trigger: CATCAGCCCAAGCGAAGATTTTTCTTCAAGCAGCCAGGCAGAAGTCCCGCCCTCTCTCTCTCGTTCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253669.10
ENST00000448593.6
ENST00000593360.1
ENST00000597917.1
CDS TCA 72 bp ACAGAGCTCCTTCCCAGAAAGGGAAGAACAACATCTTaGCAGGCAGGTACGAGGAGTGGTCCCAGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: TELLPRKGRTTS*QAGTRSGPSRY
Trigger: GTACCTGCTGGGACCACTCCTCGTACCTGCCTGTCAAGATGTTGTTCTTCCCTTTCTGGGAAGGAGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS TCA 72 bp GAGCAACTGAAAAACAGTCCTTGTTGCCTGCACCACTaGGCAGAAGGATGCCTGCAACTGCGGGACCTGTGT +
Preference number: 6 (lower is better)
Translates to: EQLKNSPCCLHH*AEGCLQLRDLC
Trigger: ACACAGGTCCCGCAGTTGCAGGCATCCTTCTGCTCAGTGGTGCAGGCAACAAGGACTGTTTTTCAGTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 72 bp GAATGCCTGAGGCCTCCAAGCCAGACCATGAGCAACTaGAAAACAGTCCTTGTTGCCTGCACCACTGAGCAG +
Preference number: 6 (lower is better)
Translates to: ECLRPPSQTMSN*KTVLVACTTEQ
Trigger: CTGCTCAGTGGTGCAGGCAACAAGGACTGTTTTTCAGTTGCTCATGGTCTGGCTTGGAGGCCTCAGGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 72 bp ACAGAAACCAATGCAAATGTGAAAAGGGCTGTGCTGTaGCAGGGAGAATGCCTGAGGCCTCCAAGCCAGACC +
Preference number: 6 (lower is better)
Translates to: TETNANVKRAVL*QGECLRPPSQT
Trigger: GGTCTGGCTTGGAGGCCTCAGGCATTCTCCCTGGCACAGCACAGCCCTTTTCACATTTGCATTGGTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 72 bp ACAACCTGTGCGAGCCTCAGCTACTGCACCTGTACCTaGGAGGTGCTACTGTCAATCTATCGGTTACGGCAA +
Preference number: 6 (lower is better)
Translates to: TTCASLSYCTCT*EVLLSIYRLRQ
Trigger: TTGCCGTAACCGATAGATTGACAGTAGCACCTCCCAGGTACAGGTGCAGTAGCTGAGGCTCGCACAGGTTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CAA 90 bp AAGCCAAGGAAGACATTCGTCCCTTATCCATCCCGTGCTCTGAGATaGTGGGACAGGCACATCCATCTATCCAGGAGGGCATTGGACCAG +
Preference number: 6 (lower is better)
Translates to: KPRKTFVPYPSRALR*WDRHIHLSRRALDQ
Trigger: CTGGTCCAATGCCCTCCTGGATAGATGGATGTGCCTGTCCCACAATCTCAGAGCACGGGATGGATAAGGGACGAATGTCTTCCTTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CAA 90 bp CCGAGGTACCTTCGGAGCTCAAGGTCCTTTTTCGCCGTCACGTCCTaGAGTTCGCTCAGTAAGTCCAGCACCTGCACATTTTCTTCCGAA +
Preference number: 6 (lower is better)
Translates to: PRYLRSSRSFFAVTS*SSLSKSSTCTFSSE
Trigger: TTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGGACCTTGAGCTCCGAAGGTACCTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 72 bp CTTCTTCTTGGCACTGCTAGAATTTGTGGGGCCGGTTaGAGGCTTCCTGCAAGAGAAGAGAGAGAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: LLLGTARICGAG*RLPAREEREVL
Trigger: CAAGACCTCTCTCTCTTCTCTTGCAGGAAGCCTGCAACCGGCCCCACAAATTCTAGCAGTGCCAAGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS GCA 72 bp TCGTACATGAGAGTCACATTTTGGGAGCCTTTTAAGTaGCGTATCAGCCAGCCTCTTCTCCCTCCGGCTGTG +
Preference number: 6 (lower is better)
Translates to: SYMRVTFWEPFK*RISQPLLPPAV
Trigger: CACAGCCGGAGGGAGAAGAGGCTGGCTGATACGGCACTTAAAAGGCTCCCAAAATGTGACTCTCATGTACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 72 bp TCCCCTCCCTGGGTCTCCATCATCTCCTCAGTAAACTaGGAGCACAGAATAAAGCGCGTGGGAGGATTAAAG +
Preference number: 6 (lower is better)
Translates to: SPPWVSIISSVN*EHRIKRVGGLK
Trigger: CTTTAATCCTCCCACGCGCTTTATTCTGTGCTCCCAGTTTACTGAGGAGATGATGGAGACCCAGGGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 72 bp ACATTCGTCCCTTATCCATCCCGTGCTCTGAGATTGTaGGACAGGCACATCCATCTATCCAGGAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: TFVPYPSRALRL*DRHIHLSRRAL
Trigger: CAATGCCCTCCTGGATAGATGGATGTGCCTGTCCCACAATCTCAGAGCACGGGATGGATAAGGGACGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CAA 72 bp AAGACATTCGTCCCTTATCCATCCCGTGCTCTGAGATaGTGGGACAGGCACATCCATCTATCCAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: KTFVPYPSRALR*WDRHIHLSRRA
Trigger: TGCCCTCCTGGATAGATGGATGTGCCTGTCCCACAATCTCAGAGCACGGGATGGATAAGGGACGAATGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 72 bp CTGTCAATCTATCGGTTACGGCAAGGGGCGGTGGAGTaGTTCCTCTTGCTGGCCAATTTCACTTCAGTTTGC +
Preference number: 6 (lower is better)
Translates to: LSIYRLRQGAVE*FLLLANFTSVC
Trigger: GCAAACTGAAGTGAAATTGGCCAGCAAGAGGAATCACTCCACCGCCCCTTGCCGTAACCGATAGATTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS TCA 72 bp TCACCTGGGCAAGAAGGCATAGGTGAACACCCAAACTaGGAAGAGAGGAGGGTAATGAGAGCTCTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: SPGQEGIGEHPN*EERRVMRALWK
Trigger: CTTCCACAGAGCTCTCATTACCCTCCTCTCTTCTCAGTTTGGGTGTTCACCTATGCCTTCTTGCCCAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS TCA 72 bp GTGTCACCTGCACTAGGACAACACGCCTCTCTACCCTaGCATACATCACATCAAGGCCAGTCGTACATGAGA +
Preference number: 6 (lower is better)
Translates to: VSPALGQHASLP*HTSHQGQSYMR
Trigger: TCTCATGTACGACTGGCCTTGATGTGATGTATGTCAGGGTAGAGAGGCGTGTTGTCCTAGTGCAGGTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 72 bp CAAGGAAGACATTCGTCCCTTATCCATCCCGTGCTCTaGGATTGTGGGACAGGCACATCCATCTATCCAGGA +
Preference number: 6 (lower is better)
Translates to: QGRHSSLIHPVL*DCGTGTSIYPG
Trigger: TCCTGGATAGATGGATGTGCCTGTCCCACAATCTCAGAGCACGGGATGGATAAGGGACGAATGTCTTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 72 bp GAAGCCAAGGAAGACATTCGTCCCTTATCCATCCCGTaGTCTGAGATTGTGGGACAGGCACATCCATCTATC +
Preference number: 6 (lower is better)
Translates to: EAKEDIRPLSIP*SEIVGQAHPSI
Trigger: GATAGATGGATGTGCCTGTCCCACAATCTCAGAGCACGGGATGGATAAGGGACGAATGTCTTCCTTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 72 bp AACAGTGCAGCCACCAACAGCCCTGAGCAAACAGGGTaGCACCTCTTTCTTAAAGCATTTTCCGAGGTACCT +
Preference number: 6 (lower is better)
Translates to: NSAATNSPEQTG*HLFLKAFSEVP
Trigger: AGGTACCTCGGAAAATGCTTTAAGAAAGAGGTGGCACCCTGTTTGCTCAGGGCTGTTGGTGGCTGCACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 72 bp TGCTACTGTCAATCTATCGGTTACGGCAAGGGGCGGTaGAGTGATTCCTCTTGCTGGCCAATTTCACTTCAG +
Preference number: 6 (lower is better)
Translates to: CYCQSIGYGKGR*SDSSCWPISLQ
Trigger: CTGAAGTGAAATTGGCCAGCAAGAGGAATCACTCCACCGCCCCTTGCCGTAACCGATAGATTGACAGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CCA 72 bp TGTGGGACAGGCACATCCATCTATCCAGGAGGGCATTaGACCAGAACTGAAATGTCACTCTGGTGTCCTCAA +
Preference number: 6 (lower is better)
Translates to: CGTGTSIYPGGH*TRTEMSLWCPQ
Trigger: TTGAGGACACCAGAGTGACATTTCAGTTCTGGTCCAATGCCCTCCTGGATAGATGGATGTGCCTGTCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CAA 72 bp CACAATACAGATGACAATGACACCTGCTGGCCATTCTaGTATCATGCAGCGTCTGGGAAAAGAGCAGCTCGC +
Preference number: 6 (lower is better)
Translates to: HNTDDNDTCWPF*YHAASGKRAAR
Trigger: GCGAGCTGCTCTTTTCCCAGACGCTGCATGATACAAGAATGGCCAGCAGGTGTCATTGTCATCTGTATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CAA 90 bp TTTGTTATCCACAATACAGATGACAATGACACCTGCTGGCCATTCTaGTATCATGCAGCGTCTGGGAAAAGAGCAGCTCGCTCAGGGGAC +
Preference number: 6 (lower is better)
Translates to: FVIHNTDDNDTCWPF*YHAASGKRAARSGD
Trigger: GTCCCCTGAGCGAGCTGCTCTTTTCCCAGACGCTGCATGATACAAGAATGGCCAGCAGGTGTCATTGTCATCTGTATTGTGGATAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CAA 90 bp CATGATCATTCATGCCTAGCTCTCGGTCAGTATTCAACTTCTTTCTaGTTCATGGTGTGTTACCCTAGGCAAGTCACTTCCCCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: HDHSCLALGQYSTSF*FMVCYPRQVTSPPW
Trigger: CCAGGGAGGGGAAGTGACTTGCCTAGGGTAACACACCATGAACAAGAAAGAAGTTGAATACTGACCGAGAGCTAGGCATGAATGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS TCA 72 bp CACATCCATCTATCCAGGAGGGCATTGGACCAGAACTaGAATGTCACTCTGGTGTCCTCAACAGAAACCAAT +
Preference number: 6 (lower is better)
Translates to: HIHLSRRALDQN*NVTLVSSTETN
Trigger: ATTGGTTTCTGTTGAGGACACCAGAGTGACATTTCAGTTCTGGTCCAATGCCCTCCTGGATAGATGGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS TCA 72 bp CTCTCCATTCAAGCCAGGAAACGCAGGCCGTGTTTTTaGACAATACCACTTGCTTCTAAAAGCCCAATTTCG +
Preference number: 6 (lower is better)
Translates to: LSIQARKRRPCF*TIPLASKSPIS
Trigger: CGAAATTGGGCTTTTAGAAGCAAGTGGTATTGTTCAAAAACACGGCCTGCGTTTCCTGGCTTGAATGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595958.1
CDS TCA 72 bp TACCCTGACATACATCACATCAAGGCCAGTCGTACATaGGAGTCACATTTTGGGAGCCTTTTAAGTGCCGTA +
Preference number: 6 (lower is better)
Translates to: YPDIHHIKASRT*ESHFGSLLSAV
Trigger: TACGGCACTTAAAAGGCTCCCAAAATGTGACTCTCATGTACGACTGGCCTTGATGTGATGTATGTCAGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CAA 72 bp CCAGGAAACGCAGGCCGTGTTTTTGAACAATACCACTaGCTTCTAAAAGCCCAATTTCGTCCAAGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: PGNAGRVFEQYH*LLKAQFRPRWK
Trigger: TTTCCACCTTGGACGAAATTGGGCTTTTAGAAGCAAGTGGTATTGTTCAAAAACACGGCCTGCGTTTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595958.1
CDS CAA 72 bp AAGGGAAGGCAAGGCGGGTGCTTTTGGATGGAGATTTaGTTATCCACAATACAGATGACAATGACACCTGCT +
Preference number: 6 (lower is better)
Translates to: KGRQGGCFWMEI*LSTIQMTMTPA
Trigger: AGCAGGTGTCATTGTCATCTGTATTGTGGATAACAAAATCTCCATCCAAAAGCACCCGCCTTGCCTTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS GCA 72 bp GATTTTGTTATCCACAATACAGATGACAATGACACCTaGTGGCCATTCTTGTATCATGCAGCGTCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: DFVIHNTDDNDT*WPFLYHAASGK
Trigger: TTTCCCAGACGCTGCATGATACAAGAATGGCCAGCAGGTGTCATTGTCATCTGTATTGTGGATAACAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CCA 72 bp TTTGTTATCCACAATACAGATGACAATGACACCTGCTaGCCATTCTTGTATCATGCAGCGTCTGGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: FVIHNTDDNDTC*PFLYHAASGKR
Trigger: TCTTTTCCCAGACGCTGCATGATACAAGAATGGCCAGCAGGTGTCATTGTCATCTGTATTGTGGATAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CAA 72 bp CTCAAATTATCCCTGGGTTCATTCATTCACCAGACATaGATGCACCTACTATATTCCAGTAGAGACACAGTG +
Preference number: 6 (lower is better)
Translates to: LKLSLGSFIHQT*MHLLYSSRDTV
Trigger: CACTGTGTCTCTACTGGAATATAGTAGGTGCATCAATGTCTGGTGAATGAATGAACCCAGGGATAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CAA 72 bp ATACTCTGTGAATCTAGGACACGTCTTATAGCATATTaGATCCTCACTTCACCTAGAGTCCCCATTAGCTCA +
Preference number: 6 (lower is better)
Translates to: ILCESRTRLIAY*ILTSPRVPISS
Trigger: TGAGCTAATGGGGACTCTAGGTGAAGTGAGGATCAAATATGCTATAAGACGTGTCCTAGATTCACAGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597479.1
CDS CAA 90 bp ACAGCAGATCTCAAATTATCCCTGGGTTCATTCATTCACCAGACATaGATGCACCTACTATATTCCAGTAGAGACACAGTGGTAACAAAA +
Preference number: 6 (lower is better)
Translates to: TADLKLSLGSFIHQT*MHLLYSSRDTVVTK
Trigger: TTTTGTTACCACTGTGTCTCTACTGGAATATAGTAGGTGCATCAATGTCTGGTGAATGAATGAACCCAGGGATAATTTGAGATCTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593360.1
CDS CAA 90 bp TTGAGTCTTATACTCTGTGAATCTAGGACACGTCTTATAGCATATTaGATCCTCACTTCACCTAGAGTCCCCATTAGCTCAAAAATGACT +
Preference number: 6 (lower is better)
Translates to: LSLILCESRTRLIAY*ILTSPRVPISSKMT
Trigger: AGTCATTTTTGAGCTAATGGGGACTCTAGGTGAAGTGAGGATCAAATATGCTATAAGACGTGTCCTAGATTCACAGAGTATAAGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597479.1