Pregenerated sensors for HAUS5-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267626Ensembl transcript IDs: ENST00000589603.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGTGCGAGTTCCTTATTCTCTCTTCTGCCTGGATTCAAAAGACTCTaGGCCCATAGAAGATGGTTGAATCACCTTATGGAAGAAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GASSLFSLLPGFKRL*AHRRWLNHLMEEAW Trigger: CCAGGCTTCTTCCATAAGGTGATTCAACCATCTTCTATGGGCTCAGAGTCTTTTGAATCCAGGCAGAAGAGAGAATAAGGAACTCGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS TCA 90 bp | CTCTTCTGCCTGGATTCAAAAGACTCTGAGCCCATAGAAGATGGTTaGATCACCTTATGGAAGAAGCCTGGATCCCTGAATTACTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFCLDSKDSEPIEDG*ITLWKKPGSLNYYV Trigger: CACATAGTAATTCAGGGATCCAGGCTTCTTCCATAAGGTGATTCAACCATCTTCTATGGGCTCAGAGTCTTTTGAATCCAGGCAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS CCA 90 bp | CTTTGGGAACTCCATTTTCACAGTTTTCAAGTAGCTCTCACACTTTaGCTCTCACGTCTCAGCTCAAAGAACATCTTAGAAAGGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWELHFHSFQVALTL*LSRLSSKNILERPS Trigger: AGAAGGCCTTTCTAAGATGTTCTTTGAGCTGAGACGTGAGAGCCAAAGTGTGAGAGCTACTTGAAAACTGTGAAAATGGAGTTCCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS TCA 90 bp | GTGGATCAGGAGAAATGTCTGATGGGATGTTCTATGAGTAAGAAATaGGAAGACTCTTCTCAAACGTGGAAGGAGCTGCTGAAACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VDQEKCLMGCSMSKK*EDSSQTWKELLKPK Trigger: TTTTGGTTTCAGCAGCTCCTTCCACGTTTGAGAAGAGTCTTCTCATTTCTTACTCATAGAACATCCCATCAGACATTTCTCCTGATCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS TCA 90 bp | ATGTTCAATGGACTGAGAGCAGAAGTGATGTATGTCACTTTAGGGTaGAGACTTTCAAGAAGCAGGTGCGAGTTCCTTATTCTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MFNGLRAEVMYVTLG*RLSRSRCEFLILSS Trigger: AGAAGAGAGAATAAGGAACTCGCACCTGCTTCTTGAAAGTCTTCACCCTAAAGTGACATACATCACTTCTGCTCTCAGTCCATTGAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS TCA 72 bp | GGACTGAGAGCAGAAGTGATGTATGTCACTTTAGGGTaGAGACTTTCAAGAAGCAGGTGCGAGTTCCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: GLRAEVMYVTLG*RLSRSRCEFLI Trigger: AATAAGGAACTCGCACCTGCTTCTTGAAAGTCTTCACCCTAAAGTGACATACATCACTTCTGCTCTCAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS CAA 90 bp | ACTTTGGGAACTCCATTTTCACAGTTTTCAAGTAGCTCTCACACTTaGGCTCTCACGTCTCAGCTCAAAGAACATCTTAGAAAGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TLGTPFSQFSSSSHT*ALTSQLKEHLRKAF Trigger: GAAGGCCTTTCTAAGATGTTCTTTGAGCTGAGACGTGAGAGCCAAAGTGTGAGAGCTACTTGAAAACTGTGAAAATGGAGTTCCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS TCA 72 bp | TCCTTATTCTCTCTTCTGCCTGGATTCAAAAGACTCTaGGCCCATAGAAGATGGTTGAATCACCTTATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLFSLLPGFKRL*AHRRWLNHLME Trigger: TTCCATAAGGTGATTCAACCATCTTCTATGGGCTCAGAGTCTTTTGAATCCAGGCAGAAGAGAGAATAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS CCA 72 bp | CATAGAAGATGGTTGAATCACCTTATGGAAGAAGCCTaGATCCCTGAATTACTATGTGGATCAGGAGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: HRRWLNHLMEEA*IPELLCGSGEM Trigger: CATTTCTCCTGATCCACATAGTAATTCAGGGATCCAGGCTTCTTCCATAAGGTGATTCAACCATCTTCTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||
| CDS CAA 72 bp | ACTCCATTTTCACAGTTTTCAAGTAGCTCTCACACTTaGGCTCTCACGTCTCAGCTCAAAGAACATCTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TPFSQFSSSSHT*ALTSQLKEHLR Trigger: TCTAAGATGTTCTTTGAGCTGAGACGTGAGAGCCAAAGTGTGAGAGCTACTTGAAAACTGTGAAAATGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589603.1 |
||