RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAUS5 (Homo sapiens)

Ensembl gene IDs: ENSG00000249115

Ensembl transcript IDs: ENST00000203166.10, ENST00000424522.5, ENST00000428854.5, ENST00000430749.2, ENST00000585968.5, ENST00000587439.5, ENST00000588570.5, ENST00000590994.1, ENST00000592291.5

Found 609 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCTGGAGGCGCTGGGTCAAGACTTGCCGCTCCTTCAGGAGGGTaGTCCGCTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: GPGGAGSRLAAPSGG*SAGRPAHPQSASPP
Trigger: AGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGCCTCCAGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 90 bp TGGCCTGGGGAAGCAGGAGGTTCTGCAGGAACTGGGCCCGGAGGGTaGAGGCTGTTCGGACATCACGCAGGACCACGGGCTCCAGGCCCA +
Preference number: 1 (lower is better)
Translates to: WPGEAGGSAGTGPGG*RLFGHHAGPRAPGP
Trigger: TGGGCCTGGAGCCCGTGGTCCTGCGTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTCCCCAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 90 bp CCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTGGGGCAAATaGCGGACTTCCTCCTCCAGACAGCGCAGCAGCTCCCGGCTCTGT +
Preference number: 1 (lower is better)
Translates to: PGLCRSSVPNRMWGK*RTSSSRQRSSSRLC
Trigger: ACAGAGCCGGGAGCTGCTGCGCTGTCTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR GCA 90 bp CTCTGTGTCGCCAAGCCCATCCCCACTGCACAGGGACCGAATCTCTaGCTCCCGCTCTGCAGCCAGGTGCTCCAAGGCAGCCAGGACGTG +
Preference number: 1 (lower is better)
Translates to: LCVAKPIPTAQGPNL*LPLCSQVLQGSQDV
Trigger: CACGTCCTGGCTGCCTTGGAGCACCTGGCTGCAGAGCGGGAGGCAGAGATTCGGTCCCTGTGCAGTGGGGATGGGCTTGGCGACACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 90 bp CCGTGGGCAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTaGCCAACAGAATGTGGGGCAAATGCCGGACTTCCTCCTCCAGAC +
Preference number: 1 (lower is better)
Translates to: PWAGASTLPACAAAA*PTECGANAGLPPPD
Trigger: GTCTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 90 bp AGGCGCTGGGTCAAGACTTGCCGCTCCTTCAGGAGGGTGCTCCGCTaGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGA +
Preference number: 1 (lower is better)
Translates to: RRWVKTCRSFRRVLR*ETSTPTVRQPSWMR
Trigger: TCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR TCA 90 bp GCCCAGCTGCATCCTGCAGCTCCTGGCTCTGATCGTGCAGGGCCTTaGGCTCCGTCCACAGGCAACAGCGCCGAAGCCCCAGTATCAGCA +
Preference number: 1 (lower is better)
Translates to: AQLHPAAPGSDRAGP*APSTGNSAEAPVSA
Trigger: TGCTGATACTGGGGCTTCGGCGCTGTTGCCTGTGGACGGAGCTCAAGGCCCTGCACGATCAGAGCCAGGAGCTGCAGGATGCAGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR CCA 90 bp ACCATGGACGGCAGGGTCTGGCTGGAGTCTGACTGGTCCGGGGCCTaGGGTCTGGATATCTCTGTGTCGCCAAGCCCATCCCCACTGCAC +
Preference number: 1 (lower is better)
Translates to: TMDGRVWLESDWSGA*GLDISVSPSPSPLH
Trigger: GTGCAGTGGGGATGGGCTTGGCGACACAGAGATATCCAGACCCCAGGCCCCGGACCAGTCAGACTCCAGCCAGACCCTGCCGTCCATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 90 bp TCTCACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTaGGGCAAATGCCGGACTTCCTCCTCCAGACAGCGCAGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: SHSPGLCRSSVPNRM*GKCRTSSSRQRSSS
Trigger: GGAGCTGCTGCGCTGTCTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587439.5
3UTR GCA 90 bp CCGGACTTCCTCCTCCAGACAGCGCAGCAGCTCCCGGCTCTGTGGTaGCACTGCCTCAAATGTAGGGACCACCTTTCGCTGGACCAGAGC +
Preference number: 1 (lower is better)
Translates to: PDFLLQTAQQLPALW*HCLKCRDHLSLDQS
Trigger: GCTCTGGTCCAGCGAAAGGTGGTCCCTACATTTGAGGCAGTGGCACCACAGAGCCGGGAGCTGCTGCGCTGTCTGGAGGAGGAAGTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR CCA 90 bp AGGGGGTGCTTTAGCGGGATGAAAGGACAGGGTCCAGGAGCTGAGTaGGGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGG +
Preference number: 1 (lower is better)
Translates to: RGCFSGMKGQGPGAE*GSRTAHEGTAGAGG
Trigger: CCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCCCCACTCAGCTCCTGGACCCTGTCCTTTCATCCCGCTAAAGCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR CCA 90 bp TTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTaGGGCAAATGCCGGACTTCCTCCTCCAGACAGCGCAGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: FNSPGLCRSSVPNRM*GKCRTSSSRQRSSS
Trigger: GGAGCTGCTGCGCTGTCTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR TCA 90 bp CTCCTGGATGAGATGAACCATGGACGGCAGGGTCTGGCTGGAGTCTaGCTGGTCCGGGGCCTGGGGTCTGGATATCTCTGTGTCGCCAAG +
Preference number: 1 (lower is better)
Translates to: LLDEMNHGRQGLAGV*LVRGLGSGYLCVAK
Trigger: CTTGGCGACACAGAGATATCCAGACCCCAGGCCCCGGACCAGTCAGACTCCAGCCAGACCCTGCCGTCCATGGTTCATCTCATCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 90 bp GCCTCAGTGTCTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTaGATTTCTGCCCGCAGGCGGGTCACAGCAGCTTCCAGCTCTAAC +
Preference number: 1 (lower is better)
Translates to: ASVSRSISSRLWSSS*ISARRRVTAASSSN
Trigger: GTTAGAGCTGGAAGCTGCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACACTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR GCA 90 bp GGCTGTTCGGACATCACGCAGGACCACGGGCTCCAGGCCCAGAGCTaGCGACGTGAGGGATCCAAAGGTCACATCTACTTTGGCTTTCCT +
Preference number: 1 (lower is better)
Translates to: GCSDITQDHGLQAQS*RREGSKGHIYFGFP
Trigger: AGGAAAGCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAGCCCGTGGTCCTGCGTGATGTCCGAACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 90 bp TCTCCATGTCCTGCAGGCGCCTCAGTTGATTCTGCAGCCGCTGCATaGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTT +
Preference number: 1 (lower is better)
Translates to: SPCPAGASVDSAAAA*DLGAYAAVFAWPQL
Trigger: AAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGGACATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 90 bp TTGTCAGCAGCGTCTCCACTGAGCTCAGCCACTGCTGGTACGAAGTaGCAAAGTGGTCATCATGAGGGGTTGGGAGGCTGCCCCTCTTGG +
Preference number: 1 (lower is better)
Translates to: LSAASPLSSATAGTK*QSGHHEGLGGCPSW
Trigger: CCAAGAGGGGCAGCCTCCCAACCCCTCATGATGACCACTTTGGCACTTCGTACCAGCAGTGGCTGAGCTCAGTGGAGACGCTGCTGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR TCA 90 bp ACATCTACTTTGGCTTTCCTCTCCATGTCCTGCAGGCGCCTCAGTTaGTTCTGCAGCCGCTGCATGGGATCTCGGAGCGTATGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: TSTLAFLSMSCRRLS*FCSRCMGSRSVCCC
Trigger: ACAGCAGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGGACATGGAGAGGAAAGCCAAAGTAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 90 bp TCCCATCAGCTAGGACATTTCTGTGTCTCCTCCTCAGTTGATCCCTaGCACCCACCTTCCCTCAGAGGCAACTGCCACTCTGACTGGGAA +
Preference number: 1 (lower is better)
Translates to: SHQLGHFCVSSSVDP*HPPSLRGNCHSDWE
Trigger: TTCCCAGTCAGAGTGGCAGTTGCCTCTGAGGGAAGGTGGGTGGCAGGGATCAACTGAGGAGGAGACACAGAAATGTCCTAGCTGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR CCA 90 bp TCCTGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTaGGGTGAACAGTGTCAAGTTCTCGGCTTCCGTTTGAACCCTCTC +
Preference number: 1 (lower is better)
Translates to: SWRCFLPNVLGEVRC*GEQCQVLGFRLNPL
Trigger: GAGAGGGTTCAAACGGAAGCCGAGAACTTGACACTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR TCA 90 bp GCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTaGACAGTGTCAAGTTCTCGGCTTCCGTTTGAACCCTCTCTTCAG +
Preference number: 1 (lower is better)
Translates to: ALLSSKCPGGGEVLG*TVSSSRLPFEPSLQ
Trigger: CTGAAGAGAGGGTTCAAACGGAAGCCGAGAACTTGACACTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR TCA 90 bp CACTGGACTTTAAGCCCTATGAGGATGGAGATCAAGGCTGTCTTGTaGCCCATTGTCCCCAGCATCACCCAGCACCTGGTTGGGCTTAGA +
Preference number: 1 (lower is better)
Translates to: HWTLSPMRMEIKAVL*PIVPSITQHLVGLR
Trigger: TCTAAGCCCAACCAGGTGCTGGGTGATGCTGGGGACAATGGGTCACAAGACAGCCTTGATCTCCATCCTCATAGGGCTTAAAGTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR TCA 90 bp GTAACCCACGCAGTGAAATGCACAGGCCTTAAGACTACAACTACATaGGCTCTGACAAATCTCTACACCTGCGTCACCGCCGCTGCTCTT +
Preference number: 1 (lower is better)
Translates to: VTHAVKCTGLKTTTT*ALTNLYTCVTAAAL
Trigger: AAGAGCAGCGGCGGTGACGCAGGTGTAGAGATTTGTCAGAGCTCATGTAGTTGTAGTCTTAAGGCCTGTGCATTTCACTGCGTGGGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR GCA 90 bp ACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTaGTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATAT +
Preference number: 1 (lower is better)
Translates to: TWAVWPSIQITHPTP*WISHTAVNLQHTTY
Trigger: ATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
3UTR TCA 90 bp TGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTTaGAAACTTACTGCAACACCAGTAAAACTACCATCTGTGCATGTT +
Preference number: 1 (lower is better)
Translates to: WTARFKIIKLPNFQI*KLTATPVKLPSVHV
Trigger: AACATGCACAGATGGTAGTTTTACTGGTGTTGCAGTAAGTTTTCAAATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR CCA 90 bp GCTACTGTAGGAATGACACATGGAGAGTTAAATACAAAGCAGGTCTaGAGAGAAGCCAGATATAACCCAATTAAACATGGAAATTTAGTG +
Preference number: 1 (lower is better)
Translates to: ATVGMTHGELNTKQV*REARYNPIKHGNLV
Trigger: CACTAAATTTCCATGTTTAATTGGGTTATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR CAA 90 bp GGCCCCAGCTTGGGCCCGGAGGAGGAGAGCTCGACGCTGGGTGTCTaGAGTGTGCTGACGTGCCTGCTCCATGGCCGTGTCCTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: GPSLGPEEESSTLGV*SVLTCLLHGRVLSL
Trigger: GAGGCTCAGGACACGGCCATGGAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGGGCCCAAGCTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR CAA 90 bp TCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTaGATGAGCAGGCGGACCTGTTCCTGGGTCTCCTCCACCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SPGLRHRRVLLAEFP*MSRRTCSWVSSTSW
Trigger: CCAGCTGGTGGAGGAGACCCAGGAACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp GCTCCGCTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGATGGCGGGTGGGGACGACTaGCGAGGAATCCTGGCGCTG +
Preference number: 2 (lower is better)
Translates to: APLGDQHTHSPPALLDEMAGGDD*RGILAL
Trigger: CAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGC...CATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CAA 90 bp TGGACCAGAGCTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTaGCTGGCCGAGTTTCCCTTGATGAGCAGGCGGACCTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: WTRASTSPGLRHRRV*LAEFPLMSRRTCSW
Trigger: CCAGGAACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAGCTCTGGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp ATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCTCCCTCAGCAGGAGCTaGCGATGCCCAGCTGCATCC +
Preference number: 2 (lower is better)
Translates to: MRGLQVRVGTTAEESWRCSLSRS*RCPAAS
Trigger: GGATGCAGCTGGGCATCGGCAGCTCCTGCTGAGGGA...GCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGATGCAGCTCCTGGCTCTaGTCGTGCAGGGCCTTGAGC +
Preference number: 2 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRCSSWL*SCRALS
Trigger: GCTCAAGGCCCTGCACGATCAGAGCCAGGAGCTGCA...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp ACCGTGGGCAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACCAAGCCCATCCCCACTaGACAGGGACCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: TVGRGFNSPGLCRSSVPNQAHPH*TGTESL
Trigger: CAGAGATTCGGTCCCTGTGCAGTGGGGATGGGCTTG...GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR TCA 90 bp ATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: MRGLQVRVGTTAEESWRCRRRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAACCTCCGCCT...GCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp CAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTGACTGGGCCCGGAGGGTaGAGGCTGTTCGGACATCAC +
Preference number: 2 (lower is better)
Translates to: QGLQLSRPVPQQRAQQNVTGPGG*RLFGHH
Trigger: GTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGT...CACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp CCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGGGTCATCATGAGGGGTTaGGAGGCTGCCCCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: PGGSPSLWLSAMKLEPLGVIMRG*EAAPLG
Trigger: GCCAAGAGGGGCAGCCTCCCAACCCCTCATGATGAC...CCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CAA 90 bp CATGGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTaGGGCCCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: HGISERMLLSSHGPS*GPEEESSTLGVLSV
Trigger: CACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR-3UTR TCA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRRRRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGCAACCTCCGCCT...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp CCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCGAGTTCCTGGATTTCTaGCCGCAGGCGGGTCACAGC +
Preference number: 2 (lower is better)
Translates to: PEEESSTLGVLSVLTCLLEFLDF*PQAGHS
Trigger: GCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACTC...GAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR-3UTR CCA 90 bp ATGGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGCTCTGGTCGAGTTCCTaGATTTCTGCCCGCAGGCGG +
Preference number: 2 (lower is better)
Translates to: MGSRSVCCCLRMAPAWARLWSSS*ISARRR
Trigger: CCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAG...CCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR-3UTR CCA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGATCCGCTGCTGTTTaGCCTGTAGCTCCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRGSAAV*PVAPSA
Trigger: TGCTGAGGGAGCTACAGGCCAAACAGCAGCGGATCC...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTCAGCAGAACAGCACATaGGGGGACTGCAGGTGCGGG +
Preference number: 2 (lower is better)
Translates to: GPLHVLLPPAASPYSATPQQNST*GDCRCG
Trigger: CCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTG...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp CCCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGCAGGGCCTTTGCATGTaGTGTTGCCTCCAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: PWRQPQLVAQRYEAGAPWQGLCM*CCLQLQ
Trigger: TTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCTG...CCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp CCACCAGCTGGCGCCAGTGCAGGATCCGCTGCTGTTTGGCCTGTAGCTCCCTCATTGAGTGTGCTGACGTaGCTGCTCCATGGCCGTGTC +
Preference number: 2 (lower is better)
Translates to: PPAGASAGSAAVWPVAPSLSVLT*LLHGRV
Trigger: GACACGGCCATGGAGCAGGCACGTCAGCACACTCAA...TGAGGGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR GCA 90 bp CTCTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGCACTCTCCCGGCCTGTaGCGCAGCAGCGTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: LFLLFFLGCLDLQQLLGGHSPGL*RSSVPN
Trigger: GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTG...CCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587439.5
3UTR-3UTR CCA 90 bp GCTCCGCTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGATGGAGCTCAGCCACTGCTaGTACGAAGTGCCAAAGTGG +
Preference number: 2 (lower is better)
Translates to: APLGDQHTHSPPALLDEMELSHC*YEVPKW
Trigger: CCACTTTGGCACTTCGTACCAGCAGTGGCTGAGCTC...CATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp AGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCGACTGCAGGTGCGGGTaGGGACGACTGCCGAGGAAT +
Preference number: 2 (lower is better)
Translates to: STTWAVWPSIQITHPTPCDCRCG*GRLPRN
Trigger: ATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTC...GCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CCA 90 bp GGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCCAGGTCCAGGAGCTGAGTaGGGCAGCAGAACAGCACAT +
Preference number: 2 (lower is better)
Translates to: GGGELDAGCLECADVPAPGPGAE*GSRTAH
Trigger: ATGTGCTGTTCTGCTGCCCCACTCAGCTCCTGGACC...TGGAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp TGGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGCATCACCCAGCACCTaGTTGGGCTTAGAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: WDLGAYAAVFAWPQLGPGASPST*LGLEQK
Trigger: CTTCTGCTCTAAGCCCAACCAGGTGCTGGGTGATGC...TCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp CCCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGACTTCAAGGTGGGTCTaGGGACTAGGATGCCAAGAC +
Preference number: 2 (lower is better)
Translates to: PWRQPQLVAQRYEAGAPWTSRWV*GLGCQD
Trigger: GTCTTGGCATCCTAGTCCCCAGACCCACCTTGAAGT...CCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587439.5
3UTR-3UTR TCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCAGCAGAACAGCACATaGGGGGACTGCAGGTGCGGG +
Preference number: 2 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSQQNST*GDCRCG
Trigger: CCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTG...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGGTGCTTTAGCGGGATaGAAGGACAGGGTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: GPLHVLLPPAASPYSATPGALAG*KDRVQE
Trigger: CTCCTGGACCCTGTCCTTTCATCCCGCTAAAGCACC...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGACTAAAAGTACAAAAATaGGCTGGGCGTGGTGGTGCG +
Preference number: 2 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRLKVQK*AGRGGA
Trigger: CGCACCACCACGCCCAGCTCATTTTTGTACTTTTAG...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCCAGGGACCGAATCTCTaGCTCCCGCTCTGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: FACAVASSCKPLLSHPCCQGPNL*LPLCSQ
Trigger: CTGGCTGCAGAGCGGGAGGCAGAGATTCGGTCCCTG...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR GCA 90 bp CTCTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGGCTCCTTCAGGAGGGTaGTCCGCTGGGAGACCAGCA +
Preference number: 2 (lower is better)
Translates to: LFLLFFLGCLDLQQLLGGAPSGG*SAGRPA
Trigger: TGCTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGC...CCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCGGTCCAGGAGCTGAGTaGGGCAGCAGAACAGCACAT +
Preference number: 2 (lower is better)
Translates to: RAFACAVASSCKPLLSHPGPGAE*GSRTAH
Trigger: ATGTGCTGTTCTGCTGCCCCACTCAGCTCCTGGACC...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR CAA 90 bp GAGGTGAGGTGTTGGGGTGAACAGTGTCAAGTTCTCGGCTTCCGTTaGAACCCTCTCTTCAGCTGCACAGCTTCTGCAGGGCCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: EVRCWGEQCQVLGFR*NPLFSCTASAGPPG
Trigger: CCCAGGGGGCCCTGCAGAAGCTGTGCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAACTTGACACTGTTCACCCCAACACCTCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCCCAAAGTGGTCATCATaGGGGGTTGGGAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: FACAVASSCKPLLSHPCCPKWSS*GVGRLP
Trigger: GGGCAGCCTCCCAACCCCTCATGATGACCACTTTGG...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR TCA 90 bp GAGTGTGCTGACGTGCCTGCTCCATGGCCGTGTCCTGAGCCTCAGTGTCTCGCTTTCCCCGGATCTTCTTaGCAGTCCTCTGACTGTGCA +
Preference number: 2 (lower is better)
Translates to: ECADVPAPWPCPEPQCLAFPGSS*QSSDCA
Trigger: TGCACAGTCAGAGGACTGTCAAGAAGATCCGGGGAA...AGCGAGACACTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTCAGCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592291.5
3UTR-3UTR GCA 90 bp CTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGAAGGAAGCAGGAGGTTCTaGAGGAACTGGGCCCGGAGG +
Preference number: 2 (lower is better)
Translates to: LSAVFPGMPGSAAAPGWEGSRRF*RNWARR
Trigger: CCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTCC...TTCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp CCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATTTGACTGCAGGTGCGGGTaGGGACGACTGCCGAGGAAT +
Preference number: 2 (lower is better)
Translates to: PGQCGPQFKSHIPPPAGFDCRCG*GRLPRN
Trigger: ATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTC...AAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGGGTGAGGTGTTGGGGTaGACAGTGTCAAGTTCTCGG +
Preference number: 2 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMGEVLG*TVSSSR
Trigger: CCGAGAACTTGACACTGTTCACCCCAACACCTCACC...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCTCCGACGGACCTGGCTaGGCTAATGCTGTTTCCACT +
Preference number: 2 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPSDGPG*ANAVST
Trigger: AGTGGAAACAGCATTAGCTCAGCCAGGTCCGTCGGA...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR TCA 90 bp CTCTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGCCAGAGCTGCCGACGTaGGGGATCCAAAGGTCACAT +
Preference number: 2 (lower is better)
Translates to: LFLLFFLGCLDLQQLLGGPELPT*GIQRSH
Trigger: ATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGG...CCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp GAGTGTGCTGACGTGCCTGCTCCATGGCCGTGTCCTGAGCCTCAGTGTCTCGCTATCAGCTCCAGGCTCTaGTCGAGTTCCTGGATTTCT +
Preference number: 2 (lower is better)
Translates to: ECADVPAPWPCPEPQCLAISSRL*SSSWIS
Trigger: AGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGAT...AGCGAGACACTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTCAGCACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR-3UTR CCA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGGACGTGCCTGCTCCATaGCCGTGTCCTGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQDVPAP*PCPEPQ
Trigger: CTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTC...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CAA 90 bp CACATCTACTTTGGCTTTCCTCTCCATGTCCTGCAGGCGCCTCAGTaGATTCTGCAGCCGCTGCATGGGATCTCGGAGCGTATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: HIYFGFPLHVLQAPQ*ILQPLHGISERMLL
Trigger: CAGCAGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGGACATGGAGAGGAAAGCCAAAGTAGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR TCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGCAGCAGAACAGCACATaGGGGGACTGCAGGTGCGGG +
Preference number: 2 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMQQNST*GDCRCG
Trigger: CCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTG...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCTG +
Preference number: 2 (lower is better)
Translates to: RAFACAVASSCKPLLSHPEESWR*FLPNVL
Trigger: CAGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTC...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCACACATCCCACCCCCTaGTGGATTTCCCACACAGCA +
Preference number: 2 (lower is better)
Translates to: FACAVASSCKPLLSHPCCTHPTP*WISHTA
Trigger: TGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGT...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
3UTR-3UTR CCA 90 bp CTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGATGAACCATACTGCCGAGGAATCCTaGCGCTGCTTTCTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: LGDQHTHSPPALLDEMNHTAEES*RCFLPN
Trigger: ATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGT...ATGGTTCATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGGACTGCAGGTGCGGGTaGGGACGACTGCCGAGGAAT +
Preference number: 2 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMDCRCG*GRLPRN
Trigger: ATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTC...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR TCA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGACAGCAGCGTCTCCACTaGGCTCAGCCACTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRQQRLH*AQPLLV
Trigger: TACCAGCAGTGGCTGAGCTCAGTGGAGACGCTGCTG...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR TCA 90 bp GGGTCACAGCAGCTTCCAGCTCTAACTTCCGACGGACCTGTGGACTGTCCTGGTTTCTTGACAGTCCTCTaGCTGTGCACATGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: GSQQLPALTSDGPVDCPGFLTVL*LCTCCK
Trigger: CTTGCAGCATGTGCACAGTCAGAGGACTGTCAAGAA...ACCAGGACAGTCCACAGGTCCGTCGGAAGTTAGAGCTGGAAGCTGCTGTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592291.5
3UTR-3UTR GCA 90 bp CTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGAAACACATCCCACCCCCTaGTGGATTTCCCACACAGCA +
Preference number: 2 (lower is better)
Translates to: LSAVFPGMPGSAAAPGWETHPTP*WISHTA
Trigger: TGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGT...TTCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp TTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTGTGGCTCAGCGCTATaGAGCTGGAGCCCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: LSCKLCLPALELNCWKTGCGSAL*SWSPLG
Trigger: CCCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACA...CCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACAGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCTG +
Preference number: 2 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTEESWR*FLPNVL
Trigger: CAGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTC...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp AAGCACCTAAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTCTCAGCCACCCCTGTTaGTCCTGCTCACCCCTTGAC +
Preference number: 2 (lower is better)
Translates to: KHLRESSHFRYGNVVRRGLSHPC*SCSPLD
Trigger: GTCAAGGGGTGAGCAGGAGCAACAGGGGTGGCTGAG...ACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGGGATCTCGGAGCGTATaGTGCTGTCTTCGCATGGCC +
Preference number: 2 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMGSRSV*CCLRMA
Trigger: GGCCATGCGAAGACAGCAGCATACGCTCCGAGATCC...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR GCA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGACAGTGCAGGATCCGCTaGTGTTTGGCCTGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRQCRIR*CLACSS
Trigger: GGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTG...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCATCAGCTCCAGGCTCTaGTCGAGTTCCTGGATTTCT +
Preference number: 2 (lower is better)
Translates to: FACAVASSCKPLLSHPCCISSRL*SSSWIS
Trigger: AGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGAT...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTAGTGACAGTCACCCATaGCAGGGGATGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFASDSHP*QGMQGR
Trigger: CCTGCCCTGCATCCCCTGCCATGGGTGACTGTCACT...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587439.5
3UTR-3UTR TCA 90 bp CCACCAGCTGGCGCCAGTGCAGGATCCGCTGCTGTTTGGCCTGTAGCTCCCTCACTTTGCTTTATAAATTaGGTAACCCACGCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: PPAGASAGSAAVWPVAPSLCFIN*VTHAVK
Trigger: TTTCACTGCGTGGGTTACTCAATTTATAAAGCAAAG...TGAGGGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR GCA 90 bp GGAATGACACATGGAGAGTTAAATACAAAGCAGGTCTGGAGAGAAGCCAGATATGCGGGTGGGGACGACTaGCGAGGAATCCTGGCGCTG +
Preference number: 2 (lower is better)
Translates to: GMTHGELNTKQVWREARYAGGDD*RGILAL
Trigger: CAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGC...ATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGGGTCCAGGAGCTGAGTaGGGCAGCAGAACAGCACAT +
Preference number: 2 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLGPGAE*GSRTAH
Trigger: ATGTGCTGTTCTGCTGCCCCACTCAGCTCCTGGACC...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CCA 90 bp AAGCACCTAAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTTCTGCAGCCGCTGCATaGGATCTCGGAGCGTATGCT +
Preference number: 2 (lower is better)
Translates to: KHLRESSHFRYGNVVRRGSAAAA*DLGAYA
Trigger: AGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGA...ACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAGTGCCCAACAGAATGTaGGGCAAATGCCGGACTTCC +
Preference number: 2 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRVPNRM*GKCRTS
Trigger: GGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCAC...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR TCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTGGCATGAGAATGGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: KLCLPALELNCWKTGFSVGMRMA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCCATTCTCATGCC...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGTCCCTCAGAGGCAACTaGCACTCTGACTGGGAATTT +
Preference number: 2 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMSLRGN*HSDWEF
Trigger: AAATTCCCAGTCAGAGTGGCAGTTGCCTCTGAGGGA...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTAGTGAGCTGAGTTCATaGCACTGCACTTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFASELSS*HCTSAW
Trigger: CCAGGCTGAAGTGCAGTGGCATGAACTCAGCTCACT...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGGGGGAGGTGAGGTGTTaGGGTGAACAGTGTCAAGTT +
Preference number: 2 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLGEVRC*GEQCQV
Trigger: AACTTGACACTGTTCACCCCAACACCTCACCTCCCC...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CCA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAACGACCTGGGCAGTGTaGCCCTCAATTCAAATCACA +
Preference number: 2 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRTTWAV*PSIQIT
Trigger: TGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGT...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTCCAGGAACTTCAAGGTaGGTCTGGGGACTAGGATGC +
Preference number: 2 (lower is better)
Translates to: KLCLPALELNCWKTGFSVPGTSR*VWGLGC
Trigger: GCATCCTAGTCCCCAGACCCACCTTGAAGTTCCTGG...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587439.5
3UTR-3UTR TCA 90 bp GGAATGACACATGGAGAGTTAAATACAAAGCAGGTCTGGAGAGAAGCCAGATATGCCAGCCCTCCTGGATaGGATGAACCATGGACGGCA +
Preference number: 2 (lower is better)
Translates to: GMTHGELNTKQVWREARYASPPG*DEPWTA
Trigger: TGCCGTCCATGGTTCATCTCATCCAGGAGGGCTGGC...ATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CCA 90 bp AAGCACCTAAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTAGTACAAAAATGAGCTaGGCGTGGTGGTGCGTACCT +
Preference number: 2 (lower is better)
Translates to: KHLRESSHFRYGNVVRRGSTKMS*AWWCVP
Trigger: AGGTACGCACCACCACGCCCAGCTCATTTTTGTACT...ACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCTG +
Preference number: 2 (lower is better)
Translates to: KLCLPALELNCWKTGFSVEESWR*FLPNVL
Trigger: CAGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTC...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR GCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTCTGAGATCATGCCACTaGACTCCAACTTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: KLCLPALELNCWKTGFSVLRSCH*TPTWAT
Trigger: TGTTGCCCAAGTTGGAGTGCAGTGGCATGATCTCAG...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR CCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTACTGCCGAGGAATCCTaGCGCTGCTTTCTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: KLCLPALELNCWKTGFSVTAEES*RCFLPN
Trigger: ATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGT...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAATCAGAGAGGGCGGCCTaGCCTGGCTGCTCCCACCAG +
Preference number: 2 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKSERAA*PGCSHQ
Trigger: CTGGTGGGAGCAGCCAGGCCAGGCCGCCCTCTCTGA...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR GCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTACTGCTGGTACGAAGTaGCAAAGTGGTCATCATGAG +
Preference number: 2 (lower is better)
Translates to: KLCLPALELNCWKTGFSVTAGTK*QSGHHE
Trigger: CTCATGATGACCACTTTGGCACTTCGTACCAGCAGT...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR TCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGCTTTGCTTTATAAATTaGGTAACCCACGCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMLCFIN*VTHAVK
Trigger: TTTCACTGCGTGGGTTACTCAATTTATAAAGCAAAG...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR GCA 90 bp GGAATGACACATGGAGAGTTAAATACAAAGCAGGTCTGGAGAGAAGCCAGATATTCCCTCAGAGGCAACTaGCACTCTGACTGGGAATTT +
Preference number: 2 (lower is better)
Translates to: GMTHGELNTKQVWREARYSLRGN*HSDWEF
Trigger: AAATTCCCAGTCAGAGTGGCAGTTGCCTCTGAGGGA...ATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR CCA 90 bp TGTGAGAGATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTGGGGAGGTGAGGTGTTaGGGTGAACAGTGTCAAGTT +
Preference number: 2 (lower is better)
Translates to: CERWTARFKIIKLPNFQIGEVRC*GEQCQV
Trigger: AACTTGACACTGTTCACCCCAACACCTCACCTCCCC...AATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR CCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAAATGGACGGCAGGGTCTaGCTGGAGTCTGACTGGTCC +
Preference number: 2 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKMDGRV*LESDWS
Trigger: GGACCAGTCAGACTCCAGCCAGACCCTGCCGTCCAT...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR GCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAAGCTGTTGCCTCCAGCTaGAAGCCCTTACTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKAVASS*KPLLSH
Trigger: GTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGC...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR CCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTAATACAAAGCAGGTCTaGAGAGAAGCCAGATATAAC +
Preference number: 2 (lower is better)
Translates to: KLCLPALELNCWKTGFSVNTKQV*REARYN
Trigger: GTTATATCTGGCTTCTCTCCAGACCTGCTTTGTATT...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR CCA 90 bp TGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCTTAGGGGAGGTGAGGTGTTaGGGTGAACAGTGTCAAGTT +
Preference number: 2 (lower is better)
Translates to: WISHTAVNLQHTTYIFSLGEVRC*GEQCQV
Trigger: AACTTGACACTGTTCACCCCAACACCTCACCTCCCC...TAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR CAA 90 bp ATCACACATCCCACCCCCTGCTGGATTTCCCACACAGCAGTTAACTaGCAGCATACTACATATATATTTTCCTTATCTTGTAAACTCTGT +
Preference number: 2 (lower is better)
Translates to: ITHPTPCWISHTAVN*QHTTYIFSLSCKLC
Trigger: ACAGAGTTTACAAGATAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
3UTR-3UTR CCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAAATTAGCCAGATATGGTaGTGGGTGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKISQIW*WVPVIP
Trigger: TGGGATTACAGGCACCCACCACCATATCTGGCTAAT...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR CAA 90 bp ATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTaGAAAACTTACTGCAACACCAGTAAAACTACCATCTGTGCATGT +
Preference number: 2 (lower is better)
Translates to: MDSKVQDHKAAKLPN*KTYCNTSKTTICAC
Trigger: ACATGCACAGATGGTAGTTTTACTGGTGTTGCAGTAAGTTTTCAAATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR-3UTR CCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAAGAGTTGTGTGAGAGATaGACAGCAAGGTTCAAGATC +
Preference number: 2 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKELCER*TARFKI
Trigger: GATCTTGAACCTTGCTGTCCATCTCTCACACAACTC...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR CCA 72 bp ACGCGGGGTGCAGCTGGTGGATGGATGGGAGGACCGTaGGCAGGGGCTTCAACTCTCCCGGCCTGTGCCGCA +
Preference number: 3 (lower is better)
Translates to: TRGAAGGWMGGP*AGASTLPACAA
Trigger: TGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGGTCCTCCCATCCATCCACCAGCTGCACCCCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 72 bp CAGAGGCTCCGCTGGTCCTGCAGGAGCAGAAGGTCCTaGCGAAGAGAGGCAGCCGCCGGCAGGAGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: QRLRWSCRSRRS*RREAAAGRSSS
Trigger: GGAGCTGCTCCTGCCGGCGGCTGCCTCTCTTCGCCAGGACCTTCTGCTCCTGCAGGACCAGCGGAGCCTCTG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR GCA 72 bp CCCACTGCACAGGGACCGAATCTCTGCCTCCCGCTCTaGAGCCAGGTGCTCCAAGGCAGCCAGGACGTGGCC +
Preference number: 3 (lower is better)
Translates to: PTAQGPNLCLPL*SQVLQGSQDVA
Trigger: GGCCACGTCCTGGCTGCCTTGGAGCACCTGGCTGCAGAGCGGGAGGCAGAGATTCGGTCCCTGTGCAGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 72 bp GGCGCTGGGTCAAGACTTGCCGCTCCTTCAGGAGGGTaGTCCGCTGGGAGACCAGCACACCCACAGTCCGCC +
Preference number: 3 (lower is better)
Translates to: GAGSRLAAPSGG*SAGRPAHPQSA
Trigger: GGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 72 bp CGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTaGGCCCGGAGGAGGAGAGCTCGACGCTGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: RSVCCCLRMAPA*ARRRRARRWVS
Trigger: AGACACCCAGCGTCGAGCTCTCCTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR CCA 72 bp CCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTaGGGCAAATGCCGGACTTCCTCCTCCAGACAGCGC +
Preference number: 3 (lower is better)
Translates to: PGLCRSSVPNRM*GKCRTSSSRQR
Trigger: GCGCTGTCTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR TCA 72 bp CATCCTGCAGCTCCTGGCTCTGATCGTGCAGGGCCTTaGGCTCCGTCCACAGGCAACAGCGCCGAAGCCCCA +
Preference number: 3 (lower is better)
Translates to: HPAAPGSDRAGP*APSTGNSAEAP
Trigger: TGGGGCTTCGGCGCTGTTGCCTGTGGACGGAGCTCAAGGCCCTGCACGATCAGAGCCAGGAGCTGCAGGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR GCA 72 bp TTCTGCAGCCGCTGCATGGGATCTCGGAGCGTATGCTaGTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGG +
Preference number: 3 (lower is better)
Translates to: FCSRCMGSRSVC*CLRMAPAWARR
Trigger: CCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 72 bp GAAGCAGGAGGTTCTGCAGGAACTGGGCCCGGAGGGTaGAGGCTGTTCGGACATCACGCAGGACCACGGGCT +
Preference number: 3 (lower is better)
Translates to: EAGGSAGTGPGG*RLFGHHAGPRA
Trigger: AGCCCGTGGTCCTGCGTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 72 bp AGGACCGTGGGCAGGGGCTTCAACTCTCCCGGCCTGTaGCGCAGCAGCGTGCCCAACAGAATGTGGGGCAAA +
Preference number: 3 (lower is better)
Translates to: RTVGRGFNSPGL*RSSVPNRMWGK
Trigger: TTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGGTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 72 bp GGCAGGGTCTGGCTGGAGTCTGACTGGTCCGGGGCCTaGGGTCTGGATATCTCTGTGTCGCCAAGCCCATCC +
Preference number: 3 (lower is better)
Translates to: GRVWLESDWSGA*GLDISVSPSPS
Trigger: GGATGGGCTTGGCGACACAGAGATATCCAGACCCCAGGCCCCGGACCAGTCAGACTCCAGCCAGACCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 72 bp GGTGCCACTGCCTCAAATGTAGGGACCACCTTTCGCTaGACCAGAGCTAGCACCTCCCCCGGGCTCCGGCAC +
Preference number: 3 (lower is better)
Translates to: GATASNVGTTFR*TRASTSPGLRH
Trigger: GTGCCGGAGCCCGGGGGAGGTGCTAGCTCTGGTCCAGCGAAAGGTGGTCCCTACATTTGAGGCAGTGGCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR CCA 72 bp CAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTaGGGACGCGGGGTGCAGCTGGTGGATGGATGGGAG +
Preference number: 3 (lower is better)
Translates to: QLVAQRYEAGAP*GRGVQLVDGWE
Trigger: CTCCCATCCATCCACCAGCTGCACCCCGCGTCCCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CAA 90 bp CCCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGAGGATCCGCTGCTGTTaGGCCTGTAGCTCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: PWRQPQLVAQRYEAGAPWRIRCC*ACSSLS
Trigger: GCTGAGGGAGCTACAGGCCAAACAGCAGCGGATCCT...CCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR GCA 72 bp GGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTaGCCAACAGAATGTGGGGCAAATGCCGGACTTCCT +
Preference number: 3 (lower is better)
Translates to: GASTLPACAAAA*PTECGANAGLP
Trigger: AGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 72 bp CCCAGTCTCACTCTCCCGGCCTGTGCCGCAGCAGCGTaGCCAACAGAATGTGGGGCAAATGCCGGACTTCCT +
Preference number: 3 (lower is better)
Translates to: PSLTLPACAAAA*PTECGANAGLP
Trigger: AGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTGAGACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587439.5
3UTR CCA 72 bp CTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTaGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LQVRVGTTAEES*RCFLPNVLGEV
Trigger: CACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR GCA 72 bp GTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGT +
Preference number: 3 (lower is better)
Translates to: VRVGTTAEESWR*FLPNVLGEVRC
Trigger: ACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR GCA 72 bp GAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTaGCTGCTCCATGGCCGTGTCCTGAGCCTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: ESSTLGVLSVLT*LLHGRVLSLSV
Trigger: GACACTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR GCA 72 bp CAGACAGCGCAGCAGCTCCCGGCTCTGTGGTGCCACTaGCTCAAATGTAGGGACCACCTTTCGCTGGACCAG +
Preference number: 3 (lower is better)
Translates to: QTAQQLPALWCH*LKCRDHLSLDQ
Trigger: CTGGTCCAGCGAAAGGTGGTCCCTACATTTGAGGCAGTGGCACCACAGAGCCGGGAGCTGCTGCGCTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR GCA 72 bp CTCCTCCAGACAGCGCAGCAGCTCCCGGCTCTGTGGTaGCACTGCCTCAAATGTAGGGACCACCTTTCGCTG +
Preference number: 3 (lower is better)
Translates to: LLQTAQQLPALW*HCLKCRDHLSL
Trigger: CAGCGAAAGGTGGTCCCTACATTTGAGGCAGTGGCACCACAGAGCCGGGAGCTGCTGCGCTGTCTGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR CCA 72 bp TCTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTaGATTTCTGCCCGCAGGCGGGTCACAGCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: SRSISSRLWSSS*ISARRRVTAAS
Trigger: GGAAGCTGCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
3UTR TCA 72 bp CTTACTCAGCCACCCCTGTTGCTCCTGCTCACCCCTTaGCGGAGCACGACCTGGGCAGTGTGGCCCTCAATT +
Preference number: 3 (lower is better)
Translates to: LTQPPLLLLLTP*RSTTWAVWPSI
Trigger: AATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCAACAGGGGTGGCTGAGTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
3UTR TCA 72 bp GAGATGAACCATGGACGGCAGGGTCTGGCTGGAGTCTaGCTGGTCCGGGGCCTGGGGTCTGGATATCTCTGT +
Preference number: 3 (lower is better)
Translates to: EMNHGRQGLAGV*LVRGLGSGYLC
Trigger: ACAGAGATATCCAGACCCCAGGCCCCGGACCAGTCAGACTCCAGCCAGACCCTGCCGTCCATGGTTCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CCA 72 bp CCTGCAGGCGCCTCAGTTGATTCTGCAGCCGCTGCATaGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGG +
Preference number: 3 (lower is better)
Translates to: PAGASVDSAAAA*DLGAYAAVFAW
Trigger: CCATGCGAAGACAGCAGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CAA 90 bp CTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGATGAACCATCTGTCTTGTGACCCATaGTCCCCAGCATCACCCAGC +
Preference number: 3 (lower is better)
Translates to: LGDQHTHSPPALLDEMNHLSCDP*SPASPS
Trigger: GCTGGGTGATGCTGGGGACAATGGGTCACAAGACAG...ATGGTTCATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR GCA 72 bp GACATCACGCAGGACCACGGGCTCCAGGCCCAGAGCTaGCGACGTGAGGGATCCAAAGGTCACATCTACTTT +
Preference number: 3 (lower is better)
Translates to: DITQDHGLQAQS*RREGSKGHIYF
Trigger: AAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAGCCCGTGGTCCTGCGTGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR-3UTR CAA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGTTTTCTGTTTCTTTaGTTCAGTGTGGACTCCCCA +
Preference number: 3 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRGFLFL*FSVDSP
Trigger: TGGGGAGTCCACACTGAACAAAAGAAACAGAAAACC...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CAA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAAGACATGAGAATTGTTaGAATCCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRRHENC*NPGGRG
Trigger: ACCTCTGCCTCCTGGATTCAAACAATTCTCATGTCT...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR TCA 72 bp TTGGCTTTCCTCTCCATGTCCTGCAGGCGCCTCAGTTaGTTCTGCAGCCGCTGCATGGGATCTCGGAGCGTA +
Preference number: 3 (lower is better)
Translates to: LAFLSMSCRRLS*FCSRCMGSRSV
Trigger: TACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGGACATGGAGAGGAAAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR TCA 72 bp CCTGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTaGGGTGTTGGGGTGAACAGTGTCAAGTTCTCGGCT +
Preference number: 3 (lower is better)
Translates to: PGAAFFQMSWGR*GVGVNSVKFSA
Trigger: AGCCGAGAACTTGACACTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR TCA 72 bp GTTGGGGTGAACAGTGTCAAGTTCTCGGCTTCCGTTTaGACCCTCTCTTCAGCTGCACAGCTTCTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: VGVNSVKFSASV*TLSSAAQLLQG
Trigger: GCCCTGCAGAAGCTGTGCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAACTTGACACTGTTCACCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR-3UTR CAA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTCTGGCCGAGTTTCCCTaGATGAGCAGGCGGACCTGT +
Preference number: 3 (lower is better)
Translates to: KLCLPALELNCWKTGFSVLAEFP*MSRRTC
Trigger: ACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAG...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
3UTR TCA 72 bp GACAAATCTCTACACCTGCGTCACCGCCGCTGCTCTTaGCACAGCACATTCCCATCAGCTAGGACATTTCTG +
Preference number: 3 (lower is better)
Translates to: DKSLHLRHRRCS*HSTFPSARTFL
Trigger: CAGAAATGTCCTAGCTGATGGGAATGTGCTGTGTCAAGAGCAGCGGCGGTGACGCAGGTGTAGAGATTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR CCA 72 bp TGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTaGGGTGAACAGTGTCAAGTTCTCGGCTTCCGTTTG +
Preference number: 3 (lower is better)
Translates to: CFLPNVLGEVRC*GEQCQVLGFRL
Trigger: CAAACGGAAGCCGAGAACTTGACACTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR TCA 72 bp AATGCACAGGCCTTAAGACTACAACTACATGAGCTCTaGCAAATCTCTACACCTGCGTCACCGCCGCTGCTC +
Preference number: 3 (lower is better)
Translates to: NAQALRLQLHEL*QISTPASPPLL
Trigger: GAGCAGCGGCGGTGACGCAGGTGTAGAGATTTGTCAGAGCTCATGTAGTTGTAGTCTTAAGGCCTGTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR GCA 72 bp GTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTaGTGGATTTCCCACACAGCAGTTAACTTGCAGCAT +
Preference number: 3 (lower is better)
Translates to: VWPSIQITHPTP*WISHTAVNLQH
Trigger: ATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
3UTR-3UTR CAA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGGGTTTTCTGTTTCTTTaGTTCAGTGTGGACTCCCCA +
Preference number: 3 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQGFLFL*FSVDSP
Trigger: TGGGGAGTCCACACTGAACAAAAGAAACAGAAAACC...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
3UTR TCA 72 bp CTGCCACCCACCTTCCCTCAGAGGCAACTGCCACTCTaGCTGGGAATTTCAGTAAGTGCTACTAGGATATAT +
Preference number: 3 (lower is better)
Translates to: LPPTFPQRQLPL*LGISVSATRIY
Trigger: ATATATCCTAGTAGCACTTACTGAAATTCCCAGTCAGAGTGGCAGTTGCCTCTGAGGGAAGGTGGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR TCA 72 bp GCAGTGAAATGCACAGGCCTTAAGACTACAACTACATaGGCTCTGACAAATCTCTACACCTGCGTCACCGCC +
Preference number: 3 (lower is better)
Translates to: AVKCTGLKTTTT*ALTNLYTCVTA
Trigger: GGCGGTGACGCAGGTGTAGAGATTTGTCAGAGCTCATGTAGTTGTAGTCTTAAGGCCTGTGCATTTCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR GCA 72 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTaGTGGAAGACAGGGTTTTCTGTTTCTTTTGTTCAG +
Preference number: 3 (lower is better)
Translates to: SCKLCLPALELN*WKTGFSVSFVQ
Trigger: CTGAACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
3UTR CCA 72 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATaGAGAGTTAAATACAAAGCAGGTCTGGAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: QAFLLSYCRNDT*RVKYKAGLERS
Trigger: GCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR CCA 72 bp GGAATGACACATGGAGAGTTAAATACAAAGCAGGTCTaGAGAGAAGCCAGATATAACCCAATTAAACATGGA +
Preference number: 3 (lower is better)
Translates to: GMTHGELNTKQV*REARYNPIKHG
Trigger: TCCATGTTTAATTGGGTTATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp CTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTTGATGAGCCTGCGCTAGCTCCATaGCAGCGCCGCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: LPRAPAQAGLAGRVSLDEPALAP*QRRGGD
Trigger: GTCGCCGCCGCGGCGCTGTCATGGAGCTAGCGCAGG...CTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp ACCGTGGGCAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACTCAGAGAGGGCGGCCTaGCCTGGCTGCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: TVGRGFNSPGLCRSSVPNSERAA*PGCSHQ
Trigger: CTGGTGGGAGCAGCCAGGCCAGGCCGCCCTCTCTGA...GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp TGGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGACCTGCGCTAGCTCCATaGCAGCGCCGCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: WDLGAYAAVFAWPQLGPGPALAP*QRRGGD
Trigger: GTCGCCGCCGCGGCGCTGTCATGGAGCTAGCGCAGG...TCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR CCA 90 bp ACCGTGGGCAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGGCCCTGGAGGCGCTaGGTCAAGACTTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TVGRGFNSPGLCRSSVPNRPWRR*VKTCRS
Trigger: GGAGCGGCAAGTCTTGACCCAGCGCCTCCAGGGCCT...GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp AGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCACCAGGGAGGGCGGCCTGGCCTaGCTGCTCCCACCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: STCLSLDPRTRLSTSSTREGGLA*LLPPVP
Trigger: GGGGACTGGTGGGAGCAGCCAGGCCAGGCCGCCCTC...CCTGGTGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCCAGCGCAGCCGCCACTaGGGCAGGGACAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PEEESSTLGVLSVLTCLLQRSRH*GRDRPW
Trigger: CCAGGGCCTGTCCCTGCCCCAGTGGCGGCTGCGCTG...GAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CAA 72 bp GCTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTaGCTGGCCGAGTTTCCCTTGATGAGCAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: ASTSPGLRHRRV*LAEFPLMSRRT
Trigger: GGTCCGCCTGCTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTTGATGAGGACGCGGGGTGCAGCTaGTGGATGGATGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: LPRAPAQAGLAGRVSLDEDAGCS*WMDGRT
Trigger: GGTCCTCCCATCCATCCACCAGCTGCACCCCGCGTC...CTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGATCAGAGAGGGCGGCCTaGCCTGGCTGCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRSERAA*PGCSHQ
Trigger: CTGGTGGGAGCAGCCAGGCCAGGCCGCCCTCTCTGA...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp CTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTCCCTCCTGGATGAGATaGACCATGGACGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LAPPPGSGTGGSCWPSFPPSWMR*TMDGRV
Trigger: GACCCTGCCGTCCATGGTTCATCTCATCCAGGAGGG...AGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp ATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCCAGCAGAACAGCACATaGGGGGACTGCAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: MRGLQVRVGTTAEESWRCQQNST*GDCRCG
Trigger: CCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTG...GCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTCTCCAGGCCCAGAGCTaGCGACGTGAGGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: LAPPPGSGTGGSCWPSFPLQAQS*RREGSK
Trigger: TTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAG...AGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp ATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCGGAAGCAGGAGGTTCTaGAGGAACTGGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: MRGLQVRVGTTAEESWRCGSRRF*RNWARR
Trigger: CCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTCC...GCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTTGATGAGTCCCTCAGCAGGAGCTaGCGATGCCCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LPRAPAQAGLAGRVSLDESLSRS*RCPAAS
Trigger: GGATGCAGCTGGGCATCGGCAGCTCCTGCTGAGGGA...CTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp GGCCCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGGCTGCTGTCTTCGCATaGCCCCAGCTTGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GPEEESSTLGVLSVLTCLAAVFA*PQLGPG
Trigger: TCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGC...CAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR CCA 90 bp CTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGGAGGAGCGGGGTGCAGCTGGTaGATGGATGGGAGGACCGTG +
Preference number: 4 (lower is better)
Translates to: LGAYAAVFAWPQLGPGGGAGCSW*MDGRTV
Trigger: CACGGTCCTCCCATCCATCCACCAGCTGCACCCCGC...TCCTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
3UTR CAA 72 bp TCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTaGGGCCCGGAGGAGGAGAGCTCGACGCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SERMLLSSHGPS*GPEEESSTLGV
Trigger: GACACCCAGCGTCGAGCTCTCCTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR TCA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGACCTGCGCTAGCTCCATaGCAGCGCCGCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGPALAP*QRRGGD
Trigger: GTCGCCGCCGCGGCGCTGTCATGGAGCTAGCGCAGG...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp CCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGGTGCAGCTCCTGGCTCTaGTCGTGCAGGGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PGGSPSLWLSAMKLEPLGCSSWL*SCRALS
Trigger: GCTCAAGGCCCTGCACGATCAGAGCCAGGAGCTGCA...CCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp CTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGGAGGACAGCAGAACAGCACATaGGGGGACTGCAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LGAYAAVFAWPQLGPGGGQQNST*GDCRCG
Trigger: CCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTG...TCCTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp CTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTGGTGCTTTAGCGGGATaGAAGGACAGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LAPPPGSGTGGSCWPSFPGALAG*KDRVQE
Trigger: CTCCTGGACCCTGTCCTTTCATCCCGCTAAAGCACC...AGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp CTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTGGCATGAGAATGGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LAPPPGSGTGGSCWPSFPGMRMA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCCATTCTCATGCC...AGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp AGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCTTTACTGGGCCCGGAGGGTaGAGGCTGTTCGGACATCAC +
Preference number: 4 (lower is better)
Translates to: RGLQVRVGTTAEESWRCFTGPGG*RLFGHH
Trigger: GTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGT...AAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAAGCAGGAGGTTCTaGAGGAACTGGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRGSRRF*RNWARR
Trigger: CCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTCC...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAAGCAGGAGCTGCCGATaGCCAGCTGCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRSRSCR*PAASCS
Trigger: GCTGCAGGATGCAGCTGGGCATCGGCAGCTCCTGCT...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GGATGGGAGGACCGTGGGCAGGGGCTTCAACCTACGGGCGGGGAGAAGTCTGGGTGTGCCGCAGCAGCGTaGCCAACAGAATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GWEDRGQGLQPTGGEKSGCAAAA*PTECGA
Trigger: TGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACA...CCCAGACTTCTCCCCGCCCGTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR GCA 90 bp GGATGGGAGGACCGTGGGCAGGGGCTTCAACCTACGGGCGGGGAGAAGTCTGGGTGGGATGCCTGGATCTaGAGCAGCTCCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GWEDRGQGLQPTGGEKSGWDAWI*SSSWVG
Trigger: TCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCA...CCCAGACTTCTCCCCGCCCGTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR GCA 90 bp GACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCGCGGCCTGGCCTGGCTaGTCCCACCAGTCCCCCACG +
Preference number: 4 (lower is better)
Translates to: DGARPGQCGPQFKSHIPPAAWPG*SHQSPT
Trigger: CGTGGGGGACTGGTGGGAGCAGCCAGGCCAGGCCGC...GGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCTTTAGGAGGGTGCTCCGCTaGGAGACCAGCACACCCACA +
Preference number: 4 (lower is better)
Translates to: RGLQVRVGTTAEESWRCFRRVLR*ETSTPT
Trigger: TGTGGGTGTGCTGGTCTCCCAGCGGAGCACCCTCCT...AAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCACCAGGCAGCTGGTGGATGGATaGGAGGACCGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: STCLSLDPRTRLSTSSTRQLVDG*EDRGQG
Trigger: CCCCTGCCCACGGTCCTCCCATCCATCCACCAGCTG...CCTGGTGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGAGAGGGCGGCCTGGCCTaGCTGCTCCCACCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGEGGLA*LLPPVP
Trigger: GGGGACTGGTGGGAGCAGCCAGGCCAGGCCGCCCTC...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
3UTR CAA 72 bp TTGGGCCCGGAGGAGGAGAGCTCGACGCTGGGTGTCTaGAGTGTGCTGACGTGCCTGCTCCATGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LGPEEESSTLGV*SVLTCLLHGRV
Trigger: GACACGGCCATGGAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGGGCCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR TCA 90 bp GATGGATGGGAGGACCGTGGGCAGGGGCTTCAACCTACGGGCGGGGAGAAGTCTCAAGACCAGGGCTGCTaGCCCAAGGGTGAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DGWEDRGQGLQPTGGEKSQDQGC*PKGEVW
Trigger: CCAGACCTCACCCTTGGGTCAGCAGCCCTGGTCTTG...AGACTTCTCCCCGCCCGTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR GCA 90 bp CCCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGCTCCAGGCCCAGAGCTaGCGACGTGAGGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: PWRQPQLVAQRYEAGAPWLQAQS*RREGSK
Trigger: TTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAG...CCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp AGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCACCAGGACTGGGCCCGGAGGGTaGAGGCTGTTCGGACATCAC +
Preference number: 4 (lower is better)
Translates to: STCLSLDPRTRLSTSSTRTGPGG*RLFGHH
Trigger: GTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGT...CCTGGTGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CCCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGCGCTGGGTCAAGACTTaGCGCTCCTTCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PWRQPQLVAQRYEAGAPWRWVKT*RSFRRV
Trigger: CACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCG...CCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CCACCAGCTGGCGCCAGTGCAGGATCCGCTGCTGTTTGGCCTGTAGCTCCCTCATCCCCCACGATCCCCTaGAGCTCAGGGATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PPAGASAGSAAVWPVAPSSPTIP*SSGIRS
Trigger: GGAGCGAATCCCTGAGCTGCAGGGGATCGTGGGGGA...TGAGGGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACAGCGGCCTGGCCTGGCTaGTCCCACCAGTCCCCCACG +
Preference number: 4 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTAAWPG*SHQSPT
Trigger: CGTGGGGGACTGGTGGGAGCAGCCAGGCCAGGCCGC...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCGCGGGTGGGGACGACTaGCGAGGAATCCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPAGGDD*RGILAL
Trigger: CAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGC...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGCGGGTGGGGACGACTaGCGAGGAATCCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GPLHVLLPPAASPYSATPAGGDD*RGILAL
Trigger: CAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGC...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp CTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTCAGGGCCTTTGCATGTaGTGTTGCCTCCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LAPPPGSGTGGSCWPSFPQGLCM*CCLQLQ
Trigger: TTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCTG...AGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CTCTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGCAGCGCAGCCGCCACTaGGGCAGGGACAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLLFFLGCLDLQQLLGGQRSRH*GRDRPW
Trigger: CCAGGGCCTGTCCCTGCCCCAGTGGCGGCTGCGCTG...CCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCCAGATGTCAGCCCCCTaGCCCAGACACAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PEEESSTLGVLSVLTCLLQMSAP*PRHSLW
Trigger: CCACAGGCTGTGTCTGGGCCAGGGGGCTGACATCTG...GAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592291.5
CDS-3UTR TCA 90 bp CCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCGCCAGCCCTCCTGGATaGGATGAACCATGGACGGCA +
Preference number: 4 (lower is better)
Translates to: PEEESSTLGVLSVLTCLLASPPG*DEPWTA
Trigger: TGCCGTCCATGGTTCATCTCATCCAGGAGGGCTGGC...GAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp CTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTTTCTCGGCTTCCGTTTaGACCCTCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAPPPGSGTGGSCWPSFPFSASV*TLSSAA
Trigger: TGCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAA...AGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp ATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCTCCGACGGACCTGGCTaGGCTAATGCTGTTTCCACT +
Preference number: 4 (lower is better)
Translates to: MRGLQVRVGTTAEESWRCSDGPG*ANAVST
Trigger: AGTGGAAACAGCATTAGCTCAGCCAGGTCCGTCGGA...GCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp AGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCACCAGGAGTTCCCGCGCTTCCTaGGCTAGCTCCATGACAGCG +
Preference number: 4 (lower is better)
Translates to: STCLSLDPRTRLSTSSTRSSRAS*ASSMTA
Trigger: CGCTGTCATGGAGCTAGCGCAGGAAGCGCGGGAACT...CCTGGTGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCAGTTCCCGCGCTTCCTaGGCTAGCTCCATGACAGCG +
Preference number: 4 (lower is better)
Translates to: PEEESSTLGVLSVLTCLLSSRAS*ASSMTA
Trigger: CGCTGTCATGGAGCTAGCGCAGGAAGCGCGGGAACT...GAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR GCA 90 bp GCTCCGCTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGATGTCTCGGAGCGTATGCTaGTGTCTTCGCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: APLGDQHTHSPPALLDEMSRSVC*CLRMAP
Trigger: TGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGA...CATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TGCTCCTGCTCACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCCAGGGACCGAATCTCTaGCTCCCGCTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CSCSPLDGARPGQCGPQFQGPNL*LPLCSQ
Trigger: CTGGCTGCAGAGCGGGAGGCAGAGATTCGGTCCCTG...GAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CCACCAGCTGGCGCCAGTGCAGGATCCGCTGCTGTTTGGCCTGTAGCTCCCTCACGCTGGGTCAAGACTTaGCGCTCCTTCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PPAGASAGSAAVWPVAPSRWVKT*RSFRRV
Trigger: CACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCG...TGAGGGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGGGTCAAGCAGGAGCTGCCGATaGCCAGCTGCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSAPGSGRVPGFLPAGGSSRSCR*PAASCS
Trigger: GCTGCAGGATGCAGCTGGGCATCGGCAGCTCCTGCT...TGACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp GCTCCGCTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGATGCTCCCGGCTCTGTGGTaGCACTGCCTCAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: APLGDQHTHSPPALLDEMLPALW*HCLKCR
Trigger: CCTACATTTGAGGCAGTGGCACCACAGAGCCGGGAG...CATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCCTTGGGGACGCGGGGTaGAGCTGGTGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCLGDAG*SWWMDG
Trigger: CCCATCCATCCACCAGCTGCACCCCGCGTCCCCAAG...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCGCGGGTGGGGACGACTaGCGAGGAATCCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: DGARPGQCGPQFKSHIPPAGGDD*RGILAL
Trigger: CAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGC...GGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TGCTCCTGCTCACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCGACGTGCCTGCTCCATaGCCGTGTCCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSCSPLDGARPGQCGPQFDVPAP*PCPEPQ
Trigger: CTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTC...GAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGACGTGCCTGCTCCATaGCCGTGTCCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LAPSAPGSGRVPGFLPAGDVPAP*PCPEPQ
Trigger: CTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTC...GCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR CCA 90 bp AGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCTTTTCTGCAGCCGCTGCATaGGATCTCGGAGCGTATGCT +
Preference number: 4 (lower is better)
Translates to: RGLQVRVGTTAEESWRCFSAAAA*DLGAYA
Trigger: AGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGA...AAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCACCAGCTGGCGCCAGTGCAGGATCCGCTGCTGTTTGGCCTGTAGCTCCCTCATGGATGGGAGGACCGTaGGCAGGGGCTTCAACTCTC +
Preference number: 4 (lower is better)
Translates to: PPAGASAGSAAVWPVAPSWMGGP*AGASTL
Trigger: GAGAGTTGAAGCCCCTGCCCACGGTCCTCCCATCCA...TGAGGGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCGACGCGGGGTGCAGCTaGTGGATGGATGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPDAGCS*WMDGRT
Trigger: GGTCCTCCCATCCATCCACCAGCTGCACCCCGCGTC...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCGCAGCAGCGTGCCCAACAGAATGTGGGGCAAATGCCGGACTTCCTCCTCCAGAGGAGCAGAAGGTCCTaGCGAAGAGAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: PQQRAQQNVGQMPDFLLQRSRRS*RREAAA
Trigger: GGCGGCTGCCTCTCTTCGCCAGGACCTTCTGCTCCT...CTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCATCTGCAGCAGCTCCTaGGTGGGAAGGCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCICSSS*VGRPGG
Trigger: GCCGCCAGGCCTTCCCACCCAGGAGCTGCTGCAGAT...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp TGGATTTCTGCCCGCAGGCGGGTCACAGCAGCTTCCAGCTCTAACTTCCGACGGGATCGTGCAGGGCCTTaGGCTCCGTCCACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: WISARRRVTAASSSNFRRDRAGP*APSTGN
Trigger: GTTGCCTGTGGACGGAGCTCAAGGCCCTGCACGATC...CCGTCGGAAGTTAGAGCTGGAAGCTGCTGTGACCCGCCTGCGGGCAGAAATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCGATCGTGCAGGGCCTTaGGCTCCGTCCACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPDRAGP*APSTGN
Trigger: GTTGCCTGTGGACGGAGCTCAAGGCCCTGCACGATC...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTGGCTCAGCGCTATaGAGCTGGAGCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPCGSAL*SWSPLG
Trigger: CCCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACA...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCTGTGGCTCAGCGCTATaGAGCTGGAGCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCCGSAL*SWSPLG
Trigger: CCCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACA...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp CCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCGGGGAAGCTGAGGCATaGGAATGGCTTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: PEEESSTLGVLSVLTCLLGEAEA*EWLEPG
Trigger: CCCAGGTTCAAGCCATTCTCATGCCTCAGCTTCCCC...GAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp CTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGGAGGAGGCGATAGAATCACTTaGGGCCAGGAGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LGAYAAVFAWPQLGPGGGGDRIT*GQELES
Trigger: GCTCTCCAACTCCTGGCCTCAAGTGATTCTATCGCC...TCCTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TGGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGATTGAGTGTGCTGACGTaGCTGCTCCATGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: WDLGAYAAVFAWPQLGPGLSVLT*LLHGRV
Trigger: GACACGGCCATGGAGCAGGCACGTCAGCACACTCAA...TCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR GCA 90 bp ATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGGAGTTGAGTGTGCTGACGTaGCTGCTCCATGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: ISERMLLSSHGPSLGPEELSVLT*LLHGRV
Trigger: GACACGGCCATGGAGCAGGCACGTCAGCACACTCAA...CTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR GCA 90 bp AGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCCTCTGCCTCCCGCTCTaGAGCCAGGTGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: STTWAVWPSIQITHPTPCLCLPL*SQVLQG
Trigger: GCCTTGGAGCACCTGGCTGCAGAGCGGGAGGCAGAG...GCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTCAGGGACCGAATCTCTaGCTCCCGCTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GPLHVLLPPAASPYSATPQGPNL*LPLCSQ
Trigger: CTGGCTGCAGAGCGGGAGGCAGAGATTCGGTCCCTG...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp AGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCACCAGGCAAGCCCATCCCCACTaGACAGGGACCGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: STCLSLDPRTRLSTSSTRQAHPH*TGTESL
Trigger: CAGAGATTCGGTCCCTGTGCAGTGGGGATGGGCTTG...CCTGGTGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTCCCCCACGATCCCCTaGAGCTCAGGGATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPSPTIP*SSGIRS
Trigger: GGAGCGAATCCCTGAGCTGCAGGGGATCGTGGGGGA...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGGCGGCCTGGCCTGGCTaGTCCCACCAGTCCCCCACG +
Preference number: 4 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQAAWPG*SHQSPT
Trigger: CGTGGGGGACTGGTGGGAGCAGCCAGGCCAGGCCGC...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp ATGGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGCTTCCGACGGACCTGTaGACTGTCCTGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: MGSRSVCCCLRMAPAWARLPTDL*TVLVAI
Trigger: TATGGCCACCAGGACAGTCCACAGGTCCGTCGGAAG...CCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592291.5
CDS-3UTR CCA 90 bp GGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCCACTCTGGTCGAGTTCCTaGATTTCTGCCCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GGGELDAGCLECADVPAPLWSSS*ISARRR
Trigger: CCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAG...TGGAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR CCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCGCTGCTGTCTTCGCATaGCCCCAGCTTGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPAAVFA*PQLGPG
Trigger: TCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGC...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp GACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCGCTGCTGTCTTCGCATaGCCCCAGCTTGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: DGARPGQCGPQFKSHIPPAAVFA*PQLGPG
Trigger: TCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGC...GGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCGCAGCAGCGTGCCCAACAGAATGTGGGGCAAATGCCGGACTTCCTCCTCCAGGCACCTGCCTCTCACTaGATCCCAGGACGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PQQRAQQNVGQMPDFLLQAPASH*IPGRVS
Trigger: AGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGC...CTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCGGTGCAGCTGGTGGATaGATGGGAGGACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPGAAGG*MGGPWA
Trigger: TGCCCACGGTCCTCCCATCCATCCACCAGCTGCACC...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGGAAGCTGGAGCCCCTTaGGGACGCGGGGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQEAGAP*GRGVQL
Trigger: CAGCTGCACCCCGCGTCCCCAAGGGGCTCCAGCTTC...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCGAAGCTGGAGCCCCTTaGGGACGCGGGGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FACAVASSCKPLLSHPCCEAGAP*GRGVQL
Trigger: CAGCTGCACCCCGCGTCCCCAAGGGGCTCCAGCTTC...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCACTGGGTGGGAAGGCCTaGCGGCAGGCTGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPLGGKA*RQAGLH
Trigger: ATGAAGACCAGCCTGCCGCCAGGCCTTCCCACCCAG...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCAACAGAATGTGGGGCAAATGCCGGACTTCCTCCTCCAGACAGCGCAGCAGCTATCTGCAGCAGCTCCTaGGTGGGAAGGCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PTECGANAGLPPPDSAAAICSSS*VGRPGG
Trigger: GCCGCCAGGCCTTCCCACCCAGGAGCTGCTGCAGAT...AGCTGCTGCGCTGTCTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGATTTTCCTGGGATGCCTaGATCTGCAGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRFSWDA*ICSSSW
Trigger: CCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAA...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGATGAACCATGACTGCAGGTGCGGGTaGGGACGACTGCCGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LGDQHTHSPPALLDEMNHDCRCG*GRLPRN
Trigger: ATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTC...ATGGTTCATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp ACCGTGGGCAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACTATTGCAGCACATCCTaGCTCAGGGCCTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: TVGRGFNSPGLCRSSVPNYCSTS*LRAFAC
Trigger: ACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATA...GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGCAGGCGCCTCAGTTaGTTCTGCAGCCGCTGCATG +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPCRRLS*FCSRCM
Trigger: CATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCA...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCACCAAAGTGGTCATCATaGGGGGTTGGGAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPPKWSS*GVGRLP
Trigger: GGGCAGCCTCCCAACCCCTCATGATGACCACTTTGG...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCTGCAGCTCCTGGCTCTaGTCGTGCAGGGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPCSSWL*SCRALS
Trigger: GCTCAAGGCCCTGCACGATCAGAGCCAGGAGCTGCA...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp CTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGGGTCACAGCAGCGGTGAGGTGTTGGGGTaGACAGTGTCAAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LQALVEFLDFCPQAGHSSGEVLG*TVSSSR
Trigger: CCGAGAACTTGACACTGTTCACCCCAACACCTCACC...GCTGCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp GAGTGTGCTGACGTGCCTGCTCCATGGCCGTGTCCTGAGCCTCAGTGTCTCGCTTCTCGGAGCGTATGCTaGTGTCTTCGCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ECADVPAPWPCPEPQCLASRSVC*CLRMAP
Trigger: TGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGA...AGCGAGACACTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTCAGCACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR GCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATCTCTGCCTCCCGCTCTaGAGCCAGGTGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDLCLPL*SQVLQG
Trigger: GCCTTGGAGCACCTGGCTGCAGAGCGGGAGGCAGAG...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CTCCAGGCCCAGAGCTGCCGACGTGAGGGATCCAAAGGTCACATCTACTTTGGCCAGGGACCGAATCTCTaGCTCCCGCTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LQAQSCRREGSKGHIYFGQGPNL*LPLCSQ
Trigger: CTGGCTGCAGAGCGGGAGGCAGAGATTCGGTCCCTG...GCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TGCTCCTGCTCACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCCAAGCCCATCCCCACTaGACAGGGACCGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: CSCSPLDGARPGQCGPQFQAHPH*TGTESL
Trigger: CAGAGATTCGGTCCCTGTGCAGTGGGGATGGGCTTG...GAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTCCCTCAGCAGGAGCTaGCGATGCCCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMSLSRS*RCPAAS
Trigger: GGATGCAGCTGGGCATCGGCAGCTCCTGCTGAGGGA...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp AGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTCCCTCAGCAGGAGCTaGCGATGCCCAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: STTWAVWPSIQITHPTPCSLSRS*RCPAAS
Trigger: GGATGCAGCTGGGCATCGGCAGCTCCTGCTGAGGGA...GCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCAACCAGCTGGCGCCAGTaGAGGATCCGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPTSWRQ*RIRCCL
Trigger: CAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGT...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTTGGGATGCCTGGATCTaGAGCAGCTCCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GPLHVLLPPAASPYSATPWDAWI*SSSWVG
Trigger: TCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCA...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp CTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTTGATGAGGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPRAPAQAGLAGRVSLDEEESWR*FLPNVL
Trigger: CAGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTC...CTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGGAACACATCCCACCCCCTaGTGGATTTCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: DLGAYAAVFAWPQLGPGGTHPTP*WISHTA
Trigger: TGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGT...TCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp ATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCCTGAGATCATGCCACTaGACTCCAACTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: MRGLQVRVGTTAEESWRCLRSCH*TPTWAT
Trigger: TGTTGCCCAAGTTGGAGTGCAGTGGCATGATCTCAG...GCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp ATGGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGCAGTGTGTAAGCATATaGCTGGGGCAGCACACAGGG +
Preference number: 4 (lower is better)
Translates to: MGSRSVCCCLRMAPAWARQCVSI*LGQHTG
Trigger: CCCTGTGTGCTGCCCCAGGCATATGCTTACACACTG...CCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592291.5
CDS-3UTR CCA 90 bp TCCTGGATTTCTGCCCGCAGGCGGGTCACAGCAGCTTCCAGCTCTAACTTCCGAGACGTGCCTGCTCCATaGCCGTGTCCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SWISARRRVTAASSSNFRDVPAP*PCPEPQ
Trigger: CTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTC...TCGGAAGTTAGAGCTGGAAGCTGCTGTGACCCGCCTGCGGGCAGAAATCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR CCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCGCTGCTGTCTTCGCATaGCCCCAGCTTGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: FACAVASSCKPLLSHPCCAAVFA*PQLGPG
Trigger: TCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGC...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGCTGCCCCTCTTGGCCTaGGGAAGCAGGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMLPLLA*GSRRFC
Trigger: GCAGAACCTCCTGCTTCCCCAGGCCAAGAGGGGCAG...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTGGTGCCCAACAGAATGTaGGGCAAATGCCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: QGLQLSRPVPQQRAQQNVVPNRM*GKCRTS
Trigger: GGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCAC...CACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCTGGATGGGAGGACCGTaGGCAGGGGCTTCAACTCTC +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCWMGGP*AGASTL
Trigger: GAGAGTTGAAGCCCCTGCCCACGGTCCTCCCATCCA...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGGACGCGGGGTGCAGCTaGTGGATGGATGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQDAGCS*WMDGRT
Trigger: GGTCCTCCCATCCATCCACCAGCTGCACCCCGCGTC...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGGGTGGGAAGGCCTaGCGGCAGGCTGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPLGGKA*RQAGLH
Trigger: ATGAAGACCAGCCTGCCGCCAGGCCTTCCCACCCAG...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATATCTGCAGCAGCTCCTaGGTGGGAAGGCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDICSSS*VGRPGG
Trigger: GCCGCCAGGCCTTCCCACCCAGGAGCTGCTGCAGAT...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCATCTGCAGCAGCTCCTaGGTGGGAAGGCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSICSSS*VGRPGG
Trigger: GCCGCCAGGCCTTCCCACCCAGGAGCTGCTGCAGAT...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp GGATGGGAGGACCGTGGGCAGGGGCTTCAACCTACGGGCGGGGAGAAGTCTGGGACGACCTGGGCAGTGTaGCCCTCAATTCAAATCACA +
Preference number: 4 (lower is better)
Translates to: GWEDRGQGLQPTGGEKSGTTWAV*PSIQIT
Trigger: TGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGT...CCCAGACTTCTCCCCGCCCGTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR CCA 90 bp GAGTGTGCTGACGTGCCTGCTCCATGGCCGTGTCCTGAGCCTCAGTGTCTCGCTGCAGCACACAGGGTGTaGGATCCTCATTCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ECADVPAPWPCPEPQCLAAAHRV*DPHSCA
Trigger: TGCGCAGGAATGAGGATCCCACACCCTGTGTGCTGC...AGCGAGACACTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTCAGCACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592291.5
CDS-3UTR CCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCAGTGACAGTCACCCATaGCAGGGGATGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPSDSHP*QGMQGR
Trigger: CCTGCCCTGCATCCCCTGCCATGGGTGACTGTCACT...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR TCA 90 bp ATGGGATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGTTCCCCGGATCTTCTTaGCAGTCCTCTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: MGSRSVCCCLRMAPAWARFPGSS*QSSDCA
Trigger: TGCACAGTCAGAGGACTGTCAAGAAGATCCGGGGAA...CCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR TCA 90 bp CTCCAGGCCCAGAGCTGCCGACGTGAGGGATCCAAAGGTCACATCTACTTTGGCTGCAGGCGCCTCAGTTaGTTCTGCAGCCGCTGCATG +
Preference number: 4 (lower is better)
Translates to: LQAQSCRREGSKGHIYFGCRRLS*FCSRCM
Trigger: CATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCA...GCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTCCAGAGCTGCCGACGTaGGGGATCCAAAGGTCACAT +
Preference number: 4 (lower is better)
Translates to: GPLHVLLPPAASPYSATPPELPT*GIQRSH
Trigger: ATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGG...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp GGTGGTTTGTCAGCAGCGTCTCCACTGAGCTCAGCCACTGCTGGTACGAAGTGCCAGCAGCGTCTCCACTaGGCTCAGCCACTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GGLSAASPLSSATAGTKCQQRLH*AQPLLV
Trigger: TACCAGCAGTGGCTGAGCTCAGTGGAGACGCTGCTG...GCACTTCGTACCAGCAGTGGCTGAGCTCAGTGGAGACGCTGCTGACAAACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp CAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTGTTCTCGGCTTCCGTTTaGACCCTCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QGLQLSRPVPQQRAQQNVFSASV*TLSSAA
Trigger: TGCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAA...CACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp TGCTCCTGCTCACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCGGTGAGGTGTTGGGGTaGACAGTGTCAAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: CSCSPLDGARPGQCGPQFGEVLG*TVSSSR
Trigger: CCGAGAACTTGACACTGTTCACCCCAACACCTCACC...GAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTTGTCTCCTCCTCAGTTaGTCCCTGCCACCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GPLHVLLPPAASPYSATPCLLLS*SLPPTF
Trigger: GAAGGTGGGTGGCAGGGATCAACTGAGGAGGAGACA...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCCACCGCCGCTGCTCTTaGCACAGCACATTCCCATCA +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCHRRCS*HSTFPS
Trigger: TGATGGGAATGTGCTGTGTCAAGAGCAGCGGCGGTG...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCAGGAGGTTCAGGGAGTaGCAGTCACCCATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPRRFRE*QSPMAG
Trigger: CCCTGCCATGGGTGACTGTCACTCCCTGAACCTCCT...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR GCA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCATTGAGTGTGCTGACGTaGCTGCTCCATGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPLSVLT*LLHGRV
Trigger: GACACGGCCATGGAGCAGGCACGTCAGCACACTCAA...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCATCTCGGAGCGTATGCTaGTGTCTTCGCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPSRSVC*CLRMAP
Trigger: TGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGA...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTCCGACGGACCTGTGGACTGTCCTGGTGGCCATACCAGAGTAGGTTTCCCCGGGGATCTCGGAGCGTATaGTGCTGTCTTCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: FRRTCGLSWWPYQSRFPRGSRSV*CCLRMA
Trigger: GGCCATGCGAAGACAGCAGCATACGCTCCGAGATCC...CCGGGGAAACCTACTCTGGTATGGCCACCAGGACAGTCCACAGGTCCGTCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592291.5
CDS-3UTR GCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATGCTCCTTCAGGAGGGTaGTCCGCTGGGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDAPSGG*SAGRPA
Trigger: TGCTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGC...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACAGCTCCTTCAGGAGGGTaGTCCGCTGGGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTAPSGG*SAGRPA
Trigger: TGCTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGC...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCCAGTGCAGGATCCGCTaGTGTTTGGCCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCQCRIR*CLACSS
Trigger: GGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTG...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGACCAGCTGGCGCCAGTaGAGGATCCGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMTSWRQ*RIRCCL
Trigger: CAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGT...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCTGTGCCGCAGCAGCGTaGCCAACAGAATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPCAAAA*PTECGA
Trigger: TGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACA...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCTGGGATGCCTGGATCTaGAGCAGCTCCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPWDAWI*SSSWVG
Trigger: TCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCA...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCAACCCTCTCTTCAGCTaGACAGCTTCTGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPNPLFS*TASAGP
Trigger: GGGCCCTGCAGAAGCTGTGCAGCTGAAGAGAGGGTT...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCACCCCTGTTGCTCCTaGTCACCCCTTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPHPCCS*SPLDGA
Trigger: TGCTCCGTCAAGGGGTGAGCAGGAGCAACAGGGGTG...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp CCACCAGCTGGCGCCAGTGCAGGATCCGCTGCTGTTTGGCCTGTAGCTCCCTCAAGTGAGCTGAGTTCATaGCACTGCACTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPAGASAGSAAVWPVAPSSELSS*HCTSAW
Trigger: CCAGGCTGAAGTGCAGTGGCATGAACTCAGCTCACT...TGAGGGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp GGGTCACAGCAGCTTCCAGCTCTAACTTCCGACGGACCTGTGGACTGTCCTGGTTGGGATCCTCATTCCTaGGCAGCGTCGATTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GSQQLPALTSDGPVDCPGWDPHS*AASIPG
Trigger: CCCCGGAATCGACGCTGCGCAGGAATGAGGATCCCA...ACCAGGACAGTCCACAGGTCCGTCGGAAGTTAGAGCTGGAAGCTGCTGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592291.5
CDS-3UTR CCA 90 bp CTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGGAGGATGTGGACTGTCCTGGTaGCCATACCAGAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGAYAAVFAWPQLGPGGGCGLSW*PYQSRF
Trigger: AAACCTACTCTGGTATGGCCACCAGGACAGTCCACA...TCCTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR CCA 90 bp TTGCTGGCCGAGTTTCCCTTGATGAGCAGGCGGACCTGTTCCTGGGTCTCCTCCCTTCCGACGGACCTGTaGACTGTCCTGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: LLAEFPLMSRRTCSWVSSLPTDL*TVLVAI
Trigger: TATGGCCACCAGGACAGTCCACAGGTCCGTCGGAAG...GGAGGAGACCCAGGAACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR CCA 90 bp CCCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGATCAGCTCCAGGCTCTaGTCGAGTTCCTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: PWRQPQLVAQRYEAGAPWISSRL*SSSWIS
Trigger: AGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGAT...CCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTAGGTCACATCTACTTTaGCTTTCCTCTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LAPPPGSGTGGSCWPSFPRSHLL*LSSPCP
Trigger: AGGACATGGAGAGGAAAGCCAAAGTAGATGTGACCT...AGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATCTGCCCCTCTTGGCCTaGGGAAGCAGGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDLPLLA*GSRRFC
Trigger: GCAGAACCTCCTGCTTCCCCAGGCCAAGAGGGGCAG...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CTCCAGGCCCAGAGCTGCCGACGTGAGGGATCCAAAGGTCACATCTACTTTGGCGTCATCATGAGGGGTTaGGAGGCTGCCCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LQAQSCRREGSKGHIYFGVIMRG*EAAPLG
Trigger: GCCAAGAGGGGCAGCCTCCCAACCCCTCATGATGAC...GCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCCGGGGCCTGGGGTCTaGATATCTCTGTGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPPGPGV*ISLCRQ
Trigger: TTGGCGACACAGAGATATCCAGACCCCAGGCCCCGG...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGAGGAGGGTGCTCCGCTaGGAGACCAGCACACCCACA +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQRRVLR*ETSTPT
Trigger: TGTGGGTGTGCTGGTCTCCCAGCGGAGCACCCTCCT...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGGCACCTGCCTCTCACTaGATCCCAGGACGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMAPASH*IPGRVS
Trigger: AGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGC...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGAGGCGGACCTGTTCCTaGGTCTCCTCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQRRTCS*VSSTSW
Trigger: CCAGCTGGTGGAGGAGACCCAGGAACAGGTCCGCCT...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCGGGACCACCTTTCGCTaGACCAGAGCTAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: STTWAVWPSIQITHPTPCGTTFR*TRASTS
Trigger: GGAGGTGCTAGCTCTGGTCCAGCGAAAGGTGGTCCC...GCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCGGTGCAGCTGGTGGATaGATGGGAGGACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSGAAGG*MGGPWA
Trigger: TGCCCACGGTCCTCCCATCCATCCACCAGCTGCACC...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATAGGAGCAGAAGGTCCTaGCGAAGAGAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDRSRRS*RREAAA
Trigger: GGCGGCTGCCTCTCTTCGCCAGGACCTTCTGCTCCT...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCTGGGTGGGAAGGCCTaGCGGCAGGCTGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSLGGKA*RQAGLH
Trigger: ATGAAGACCAGCCTGCCGCCAGGCCTTCCCACCCAG...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGGGTCATTTTCCTGGGATGCCTaGATCTGCAGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSAPGSGRVPGFLPAGGSFSWDA*ICSSSW
Trigger: CCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAA...TGACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp AGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCTTTAGTACAAAAATGAGCTaGGCGTGGTGGTGCGTACCT +
Preference number: 4 (lower is better)
Translates to: RGLQVRVGTTAEESWRCFSTKMS*AWWCVP
Trigger: AGGTACGCACCACCACGCCCAGCTCATTTTTGTACT...AAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACACCCAAGGGTGAGGTCTaGCAGCCTGGGAACACTGGG +
Preference number: 4 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTPKGEV*QPGNTG
Trigger: CCCAGTGTTCCCAGGCTGCCAGACCTCACCCTTGGG...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587439.5
3UTR CAA 72 bp ACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATaGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: TPNLHCPPQWPL*QHILAQGLCMC
Trigger: GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp CTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGGGTTTCCCCGGATCTTCTTaGCAGTCCTCTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: LHQLQALVEFLDFCPQAGFPGSS*QSSDCA
Trigger: TGCACAGTCAGAGGACTGTCAAGAAGATCCGGGGAA...ACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR TCA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATGCAGGCGCCTCAGTTaGTTCTGCAGCCGCTGCATG +
Preference number: 4 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTCRRLS*FCSRCM
Trigger: CATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCA...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp GACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCAGAGCTGCCGACGTaGGGGATCCAAAGGTCACAT +
Preference number: 4 (lower is better)
Translates to: DGARPGQCGPQFKSHIPPPELPT*GIQRSH
Trigger: ATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGG...GGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TGTCTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGTGCTTTAGCGGGATaGAAGGACAGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CLAPSAPGSGRVPGFLPAGALAG*KDRVQE
Trigger: CTCCTGGACCCTGTCCTTTCATCCCGCTAAAGCACC...TGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGGGTGCTTTAGCGGGATaGAAGGACAGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMGALAG*KDRVQE
Trigger: CTCCTGGACCCTGTCCTTTCATCCCGCTAAAGCACC...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCACCGCCGCTGCTCTTaGCACAGCACATTCCCATCA +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPHRRCS*HSTFPS
Trigger: TGATGGGAATGTGCTGTGTCAAGAGCAGCGGCGGTG...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp AGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCTTTCAACTACATGAGCTCTaGCAAATCTCTACACCTGCG +
Preference number: 4 (lower is better)
Translates to: RGLQVRVGTTAEESWRCFQLHEL*QISTPA
Trigger: CGCAGGTGTAGAGATTTGTCAGAGCTCATGTAGTTG...AAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGAGGGGAAGCTGAGGCATaGGAATGGCTTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGGEAEA*EWLEPG
Trigger: CCCAGGTTCAAGCCATTCTCATGCCTCAGCTTCCCC...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp TGCTCCTGCTCACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCACTAATCCCAGCAGGTaGAGATTTGGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CSCSPLDGARPGQCGPQFTNPSR*RFGRQR
Trigger: CCTCTGCCTCCCAAATCTTCACCTGCTGGGATTAGT...GAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGGGATCTCGGAGCGTATaGTGCTGTCTTCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMGSRSV*CCLRMA
Trigger: GGCCATGCGAAGACAGCAGCATACGCTCCGAGATCC...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCAAGCCCATCCCCACTaGACAGGGACCGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPQAHPH*TGTESL
Trigger: CAGAGATTCGGTCCCTGTGCAGTGGGGATGGGCTTG...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGCGCTGGGTCAAGACTTaGCGCTCCTTCAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQRWVKT*RSFRRV
Trigger: CACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCG...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTGCTGGCCGAGTTTCCCTTGATGAGCAGGCGGACCTGTTCCTGGGTCTCCTCCGCTCTGTGGTGCCACTaGCTCAAATGTAGGGACCAC +
Preference number: 4 (lower is better)
Translates to: LLAEFPLMSRRTCSWVSSALWCH*LKCRDH
Trigger: GTGGTCCCTACATTTGAGGCAGTGGCACCACAGAGC...GGAGGAGACCCAGGAACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGGGTCACTGTTTTTCCTGGGATaGCTGGATCTGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSAPGSGRVPGFLPAGGSLFFLG*LDLQQL
Trigger: GAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAG...TGACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGAACCCTCTCTTCAGCTaGACAGCTTCTGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMNPLFS*TASAGP
Trigger: GGGCCCTGCAGAAGCTGTGCAGCTGAAGAGAGGGTT...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TGTCTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAAACCCTCTCTTCAGCTaGACAGCTTCTGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: CLAPSAPGSGRVPGFLPANPLFS*TASAGP
Trigger: GGGCCCTGCAGAAGCTGTGCAGCTGAAGAGAGGGTT...TGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp CTCTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGCTCAGCCACCCCTGTTaGTCCTGCTCACCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: LFLLFFLGCLDLQQLLGGLSHPC*SCSPLD
Trigger: GTCAAGGGGTGAGCAGGAGCAACAGGGGTGGCTGAG...CCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCCTCAGCCACCCCTGTTaGTCCTGCTCACCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: FACAVASSCKPLLSHPCCLSHPC*SCSPLD
Trigger: GTCAAGGGGTGAGCAGGAGCAACAGGGGTGGCTGAG...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp CCAACAGAATGTGGGGCAAATGCCGGACTTCCTCCTCCAGACAGCGCAGCAGCTGCTGTTGCCTCCAGCTaGAAGCCCTTACTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTECGANAGLPPPDSAAAAVASS*KPLLSH
Trigger: GTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGC...AGCTGCTGCGCTGTCTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGCTCTGGTCGAGTTCCTaGATTTCTGCCCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQLWSSS*ISARRR
Trigger: CCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAG...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCAACAGAATGTGGGGCAAATGCCGGACTTCCTCCTCCAGACAGCGCAGCAGCTTCTGCAGCCGCTGCATaGGATCTCGGAGCGTATGCT +
Preference number: 4 (lower is better)
Translates to: PTECGANAGLPPPDSAAASAAAA*DLGAYA
Trigger: AGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGA...AGCTGCTGCGCTGTCTGGAGGAGGAAGTCCGGCATTTGCCCCACATTCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCGGATCCGCTGCTGTTTaGCCTGTAGCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: STTWAVWPSIQITHPTPCGSAAV*PVAPSA
Trigger: TGCTGAGGGAGCTACAGGCCAAACAGCAGCGGATCC...GCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATTTAGGCGGACCTGTTCCTaGGTCTCCTCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGQCGPQFKSHIPPPAGFRRTCS*VSSTSW
Trigger: CCAGCTGGTGGAGGAGACCCAGGAACAGGTCCGCCT...AAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGAAAGGCGGACCTGTTCCTaGGTCTCCTCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSAVFPGMPGSAAAPGWERRTCS*VSSTSW
Trigger: CCAGCTGGTGGAGGAGACCCAGGAACAGGTCCGCCT...TTCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGAGGCCTGGCGGCAGGCTaGTCTTCATGTGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGGLAAG*SSCGVD
Trigger: ATCTACTCCACATGAAGACCAGCCTGCCGCCAGGCC...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CTCCAGGCCCAGAGCTGCCGACGTGAGGGATCCAAAGGTCACATCTACTTTGGCGGCCTGGCGGCAGGCTaGTCTTCATGTGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LQAQSCRREGSKGHIYFGGLAAG*SSCGVD
Trigger: ATCTACTCCACATGAAGACCAGCCTGCCGCCAGGCC...GCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCTTTTCCTGGGATGCCTaGATCTGCAGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCFSWDA*ICSSSW
Trigger: CCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAA...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGGAGGGCGGCCTGGCCTaGCTGCTCCCACCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LSCKLCLPALELNCWKTGEGGLA*LLPPVP
Trigger: GGGGACTGGTGGGAGCAGCCAGGCCAGGCCGCCCTC...CCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTCAGCGCAGCCGCCACTaGGGCAGGGACAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KLCLPALELNCWKTGFSVQRSRH*GRDRPW
Trigger: CCAGGGCCTGTCCCTGCCCCAGTGGCGGCTGCGCTG...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCGGTCCAGGAGCTGAGTaGGGCAGCAGAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPGPGAE*GSRTAH
Trigger: ATGTGCTGTTCTGCTGCCCCACTCAGCTCCTGGACC...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGCAGCAGAACAGCACATaGGGGGACTGCAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQQQNST*GDCRCG
Trigger: CCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTG...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCGGTGCTTTAGCGGGATaGAAGGACAGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSGALAG*KDRVQE
Trigger: CTCCTGGACCCTGTCCTTTCATCCCGCTAAAGCACC...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp CAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTGAGGCAACTGCCACTCTaGCTGGGAATTTCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: QGLQLSRPVPQQRAQQNVRQLPL*LGISVS
Trigger: ACTTACTGAAATTCCCAGTCAGAGTGGCAGTTGCCT...CACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp CCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATTTGAGTTCCTGGATTTCTaGCCGCAGGCGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PGQCGPQFKSHIPPPAGFEFLDF*PQAGHS
Trigger: GCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACTC...AAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GAGTGTGCTGACGTGCCTGCTCCATGGCCGTGTCCTGAGCCTCAGTGTCTCGCTGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: ECADVPAPWPCPEPQCLAEESWR*FLPNVL
Trigger: CAGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTC...AGCGAGACACTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTCAGCACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCGCTGTTGCCTCCAGCTaGAAGCCCTTACTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FACAVASSCKPLLSHPCCAVASS*KPLLSH
Trigger: GTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGC...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCTTCCGACGGACCTGTaGACTGTCCTGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSLPTDL*TVLVAI
Trigger: TATGGCCACCAGGACAGTCCACAGGTCCGTCGGAAG...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000587439.5
CDS-3UTR CCA 90 bp CCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATTTCTCTGGTCGAGTTCCTaGATTTCTGCCCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PGQCGPQFKSHIPPPAGFLWSSS*ISARRR
Trigger: CCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAG...AAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCATCAGCTCCAGGCTCTaGTCGAGTTCCTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: LAPSAPGSGRVPGFLPAGISSRL*SSSWIS
Trigger: AGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGAT...GCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000592291.5
CDS-3UTR CCA 90 bp GACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCGAGCTCAGCCACTGCTaGTACGAAGTGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: DGARPGQCGPQFKSHIPPELSHC*YEVPKW
Trigger: CCACTTTGGCACTTCGTACCAGCAGTGGCTGAGCTC...GGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGAGGCCCTGGAGGCGCTaGGTCAAGACTTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMRPWRR*VKTCRS
Trigger: GGAGCGGCAAGTCTTGACCCAGCGCCTCCAGGGCCT...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCGGATCCGCTGCTGTTTaGCCTGTAGCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSGSAAV*PVAPSA
Trigger: TGCTGAGGGAGCTACAGGCCAAACAGCAGCGGATCC...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGGTGCCCAACAGAATGTaGGGCAAATGCCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMVPNRM*GKCRTS
Trigger: GGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCAC...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGAGTGCCCAACAGAATGTaGGGCAAATGCCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGVPNRM*GKCRTS
Trigger: GGAAGTCCGGCATTTGCCCCACATTCTGTTGGGCAC...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGGAAGCTGGAGCCCCTTaGGGACGCGGGGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLEAGAP*GRGVQL
Trigger: CAGCTGCACCCCGCGTCCCCAAGGGGCTCCAGCTTC...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCTTTTCCTGGGATGCCTaGATCTGCAGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPFSWDA*ICSSSW
Trigger: CCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAA...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCCAGCAGGTGAAGATTTaGGAGGCAGAGGCGATAGAA +
Preference number: 4 (lower is better)
Translates to: LAPSAPGSGRVPGFLPAGQQVKI*EAEAIE
Trigger: TTCTATCGCCTCTGCCTCCCAAATCTTCACCTGCTG...GCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGAGGGCAGGAGGAAAGCTaGGAGAGTAAAGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGGQEES*ESKGTL
Trigger: CAGAGTCCCTTTACTCTCCCAGCTTTCCTCCTGCCC...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TCCGACGGACCTGTGGACTGTCCTGGTGGCCATACCAGAGTAGGTTTCCCCGGACCCAGACACAGCCTGTaGGGACAGTGTGTAAGCATA +
Preference number: 4 (lower is better)
Translates to: SDGPVDCPGGHTRVGFPGPRHSL*GQCVSI
Trigger: TATGCTTACACACTGTCCCCACAGGCTGTGTCTGGG...TCCGGGGAAACCTACTCTGGTATGGCCACCAGGACAGTCCACAGGTCCGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592291.5
3UTR CAA 72 bp TTTGGCTTTCCTCTCCATGTCCTGCAGGCGCCTCAGTaGATTCTGCAGCCGCTGCATGGGATCTCGGAGCGT +
Preference number: 4 (lower is better)
Translates to: FGFPLHVLQAPQ*ILQPLHGISER
Trigger: ACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGGACATGGAGAGGAAAGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp AGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTTCCCCGGATCTTCTTaGCAGTCCTCTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: STTWAVWPSIQITHPTPCFPGSS*QSSDCA
Trigger: TGCACAGTCAGAGGACTGTCAAGAAGATCCGGGGAA...GCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGGAGGTTGCAGTGAGCTaGGTTCATGCCACTGCACTT +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMEVAVS*VHATAL
Trigger: AAGTGCAGTGGCATGAACTCAGCTCACTGCAACCTC...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGAGGCAGAGGTTGCAGTaGGCTGAGTTCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQRQRLQ*AEFMPL
Trigger: CAGTGGCATGAACTCAGCTCACTGCAACCTCTGCCT...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGACTGAGCTCAGCCACTaGTGGTACGAAGTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMTELSH*WYEVPK
Trigger: CTTTGGCACTTCGTACCAGCAGTGGCTGAGCTCAGT...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCTCTGCCTCCCGCTCTaGAGCCAGGTGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLLCLPL*SQVLQG
Trigger: GCCTTGGAGCACCTGGCTGCAGAGCGGGAGGCAGAG...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGGCTCTGTGGTGCCACTaGCTCAAATGTAGGGACCAC +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQALWCH*LKCRDH
Trigger: GTGGTCCCTACATTTGAGGCAGTGGCACCACAGAGC...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATGCTCTGTGGTGCCACTaGCTCAAATGTAGGGACCAC +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDALWCH*LKCRDH
Trigger: GTGGTCCCTACATTTGAGGCAGTGGCACCACAGAGC...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTAACTCTCCCGGCCTGTaGCGCAGCAGCGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFANSPGL*RSSVPN
Trigger: GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTT...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACAACACATCCCACCCCCTaGTGGATTTCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTTHPTP*WISHTA
Trigger: TGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGT...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATCAGGGCCTTTGCATGTaGTGTTGCCTCCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDQGLCM*CCLQLQ
Trigger: TTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCTG...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp GCTCCGCTGGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATGAGATGGAATCTTGTAGCATATaGTTCTCACCTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: APLGDQHTHSPPALLDEMESCSI*FSPVDC
Trigger: ACAGTCCACAGGTGAGAAGCATATGCTACAAGATTC...CATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPEESWR*FLPNVQ
Trigger: CTGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTC...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590994.1
CDS-3UTR CCA 90 bp TTGCTGGCCGAGTTTCCCTTGATGAGCAGGCGGACCTGTTCCTGGGTCTCCTCCATCAGCTCCAGGCTCTaGTCGAGTTCCTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: LLAEFPLMSRRTCSWVSSISSRL*SSSWIS
Trigger: AGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGAT...GGAGGAGACCCAGGAACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCAGGTCACATCTACTTTaGCTTTCCTCTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: PEEESSTLGVLSVLTCLLRSHLL*LSSPCP
Trigger: AGGACATGGAGAGGAAAGCCAAAGTAGATGTGACCT...GAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATGAGCTCAGCCACTGCTaGTACGAAGTGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDELSHC*YEVPKW
Trigger: CCACTTTGGCACTTCGTACCAGCAGTGGCTGAGCTC...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGATGGACGGCAGGGTCTaGCTGGAGTCTGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQMDGRV*LESDWS
Trigger: GGACCAGTCAGACTCCAGCCAGACCCTGCCGTCCAT...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGAGGCCCTGGAGGCGCTaGGTCAAGACTTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLRPWRR*VKTCRS
Trigger: GGAGCGGCAAGTCTTGACCCAGCGCCTCCAGGGCCT...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGCTGGTGGATGGATaGGAGGACCGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLQLVDG*EDRGQG
Trigger: CCCCTGCCCACGGTCCTCCCATCCATCCACCAGCTG...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AAGCACCTAAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGCGGGGTGCAGCTGGTaGATGGATGGGAGGACCGTG +
Preference number: 4 (lower is better)
Translates to: KHLRESSHFRYGNVVRRGAGCSW*MDGRTV
Trigger: CACGGTCCTCCCATCCATCCACCAGCTGCACCCCGC...ACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGCGGGGTGCAGCTGGTaGATGGATGGGAGGACCGTG +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAAGCSW*MDGRTV
Trigger: CACGGTCCTCCCATCCATCCACCAGCTGCACCCCGC...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCATTCTGCTGTTTTTCCTaGGATGCCTGGATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPFCCFS*DAWICS
Trigger: GCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAA...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCACGACCTGGGCAGTGTaGCCCTCAATTCAAATCACA +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCTTWAV*PSIQIT
Trigger: TGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGT...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TTGCTGGCCGAGTTTCCCTTGATGAGCAGGCGGACCTGTTCCTGGGTCTCCTCCTATTGCAGCACATCCTaGCTCAGGGCCTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: LLAEFPLMSRRTCSWVSSYCSTS*LRAFAC
Trigger: ACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATA...GGAGGAGACCCAGGAACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp AGGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCAGTACAAAAATGAGCTaGGCGTGGTGGTGCGTACCT +
Preference number: 4 (lower is better)
Translates to: RAFACAVASSCKPLLSHPSTKMS*AWWCVP
Trigger: AGGTACGCACCACCACGCCCAGCTCATTTTTGTACT...GGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGAACCAATGTGGAAAGGCTaGGAAACAGCAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSAVFPGMPGSAAAPGWEPMWKG*ETAARG
Trigger: GCCCCTGGCTGCTGTTTCCCAGCCTTTCCACATTGG...TTCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACACCAGGAACTTCAAGGTaGGTCTGGGGACTAGGATGC +
Preference number: 4 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTPGTSR*VWGLGC
Trigger: GCATCCTAGTCCCCAGACCCACCTTGAAGTTCCTGG...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR TCA 90 bp CCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGTGCAAGAGAGGAGTTGTGTaGGAGATGGACAGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: PPQWPLLQHILAQGLCMCKRGVV*EMDSKV
Trigger: AACCTTGCTGTCCATCTCTCACACAACTCCTCTCTT...GCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGAGTTCCCGCGCTTCCTaGGCTAGCTCCATGACAGCG +
Preference number: 4 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMSSRAS*ASSMTA
Trigger: CGCTGTCATGGAGCTAGCGCAGGAAGCGCGGGAACT...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp AAGCACCTAAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGAAGCAGGAGGTTCTaGAGGAACTGGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: KHLRESSHFRYGNVVRRGGSRRF*RNWARR
Trigger: CCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTCC...ACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCAACTGCTGGTACGAAGTaGCAAAGTGGTCATCATGAG +
Preference number: 4 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPTAGTK*QSGHHE
Trigger: CTCATGATGACCACTTTGGCACTTCGTACCAGCAGT...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATACTGAGCTCAGCCACTaGTGGTACGAAGTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDTELSH*WYEVPK
Trigger: CTTTGGCACTTCGTACCAGCAGTGGCTGAGCTCAGT...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGCTTGGGGACGCGGGGTaGAGCTGGTGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSCKLCLPALELNCWKTGLGDAG*SWWMDG
Trigger: CCCATCCATCCACCAGCTGCACCCCGCGTCCCCAAG...CCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCTGTTTTTCCTGGGATaGCTGGATCTGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSLFFLG*LDLQQL
Trigger: GAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAG...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTGCGGGTGGGGACGACTaGCGAGGAATCCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCAGGDD*RGILAL
Trigger: CAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGC...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp AGCTGCCGACGTGAGGGATCCAAAGGTCACATCTACTTTGGCTTTCCTCTCCATCTCAGCCACCCCTGTTaGTCCTGCTCACCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: SCRREGSKGHIYFGFPLHLSHPC*SCSPLD
Trigger: GTCAAGGGGTGAGCAGGAGCAACAGGGGTGGCTGAG...ATGGAGAGGAAAGCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp CTTTCTGCTGTTTTTCCTGGGATGCCTGGATCTGCAGCAGCTCCTGGGTGGGAACAGGGCCTTTGCATGTaGTGTTGCCTCCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSAVFPGMPGSAAAPGWEQGLCM*CCLQLQ
Trigger: TTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCTG...TTCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCTGAGATCATGCCACTaGACTCCAACTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: DGARPGQCGPQFKSHIPPLRSCH*TPTWAT
Trigger: TGTTGCCCAAGTTGGAGTGCAGTGGCATGATCTCAG...GGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp GACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCATCAGCTCCAGGCTCTaGTCGAGTTCCTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: DGARPGQCGPQFKSHIPPISSRL*SSSWIS
Trigger: AGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGAT...GGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGAGCCAGGACGTGGCCTaGGGGGTGGTTTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLSQDVA*GVVCQQ
Trigger: CTGCTGACAAACCACCCCCCAGGCCACGTCCTGGCT...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGGTGCAGCTGGTGGATaGATGGGAGGACCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAGAAGG*MGGPWA
Trigger: TGCCCACGGTCCTCCCATCCATCCACCAGCTGCACC...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCTTCTGCTGTTTTTCCTaGGATGCCTGGATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPFCCFS*DAWICS
Trigger: GCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAA...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATTCTGCTGTTTTTCCTaGGATGCCTGGATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGFCCFS*DAWICS
Trigger: GCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAA...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp AGTTCCTGGATTTCTGCCCGCAGGCGGGTCACAGCAGCTTCCAGCTCTAACTTCGGGGAGGTGAGGTGTTaGGGTGAACAGTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: SSWISARRRVTAASSSNFGEVRC*GEQCQV
Trigger: AACTTGACACTGTTCACCCCAACACCTCACCTCCCC...GAAGTTAGAGCTGGAAGCTGCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCACTGCCGAGGAATCCTaGCGCTGCTTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPTAEES*RCFLPN
Trigger: ATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGT...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGGACTGCAGGTGCGGGTaGGGACGACTGCCGAGGAAT +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLDCRCG*GRLPRN
Trigger: ATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTC...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGAACGACCTGGGCAGTGTaGCCCTCAATTCAAATCACA +
Preference number: 4 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGTTWAV*PSIQIT
Trigger: TGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGT...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp AGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTATTGCAGCACATCCTaGCTCAGGGCCTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: STTWAVWPSIQITHPTPCYCSTS*LRAFAC
Trigger: ACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATA...GCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCAGCAGGTGAAGATTTaGGAGGCAGAGGCGATAGAA +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPQQVKI*EAEAIE
Trigger: TTCTATCGCCTCTGCCTCCCAAATCTTCACCTGCTG...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGAGTTGTGTGAGAGATaGACAGCAAGGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: LAPSAPGSGRVPGFLPAGELCER*TARFKI
Trigger: GATCTTGAACCTTGCTGTCCATCTCTCACACAACTC...GCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATTCTTGACAGTCCTCTaGCTGTGCACATGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTFLTVL*LCTCCK
Trigger: CTTGCAGCATGTGCACAGTCAGAGGACTGTCAAGAA...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCCCAAAGTGGTCATCATaGGGGGTTGGGAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFPKWSS*GVGRLP
Trigger: GGGCAGCCTCCCAACCCCTCATGATGACCACTTTGG...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTCCAAAGTGGTCATCATaGGGGGTTGGGAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAPKWSS*GVGRLP
Trigger: GGGCAGCCTCCCAACCCCTCATGATGACCACTTTGG...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTCAGCAGCGTCTCCACTaGGCTCAGCCACTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAQQRLH*AQPLLV
Trigger: TACCAGCAGTGGCTGAGCTCAGTGGAGACGCTGCTG...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATCTAAAAGTACAAAAATaGGCTGGGCGTGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDLKVQK*AGRGGA
Trigger: CGCACCACCACGCCCAGCTCATTTTTGTACTTTTAG...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCCCCCACGATCCCCTaGAGCTCAGGGATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: KLCLPALELNCWKTGFSVSPTIP*SSGIRS
Trigger: GGAGCGAATCCCTGAGCTGCAGGGGATCGTGGGGGA...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp AAGCACCTAAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGTCATCATGAGGGGTTaGGAGGCTGCCCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: KHLRESSHFRYGNVVRRGVIMRG*EAAPLG
Trigger: GCCAAGAGGGGCAGCCTCCCAACCCCTCATGATGAC...ACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCATGGACGGCAGGGTCTaGCTGGAGTCTGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFMDGRV*LESDWS
Trigger: GGACCAGTCAGACTCCAGCCAGACCCTGCCGTCCAT...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGGGGACCACCTTTCGCTaGACCAGAGCTAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLGTTFR*TRASTS
Trigger: GGAGGTGCTAGCTCTGGTCCAGCGAAAGGTGGTCCC...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAGGCCTGGCGGCAGGCTaGTCTTCATGTGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRGLAAG*SSCGVD
Trigger: ATCTACTCCACATGAAGACCAGCCTGCCGCCAGGCC...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTCTGGGTGGGAAGGCCTaGCGGCAGGCTGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFLGGKA*RQAGLH
Trigger: ATGAAGACCAGCCTGCCGCCAGGCCTTCCCACCCAG...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCACTGCCGAGGAATCCTaGCGCTGCTTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PLTEHDLGSVALNSNHTSTAEES*RCFLPN
Trigger: ATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGT...GGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGGGTCACAGCAGCAATACAAAGCAGGTCTaGAGAGAAGCCAGATATAAC +
Preference number: 4 (lower is better)
Translates to: LQALVEFLDFCPQAGHSSNTKQV*REARYN
Trigger: GTTATATCTGGCTTCTCTCCAGACCTGCTTTGTATT...GCTGCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTTGGATGGGAGGACCGTaGGCAGGGGCTTCAACCTAC +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAWMGGP*AGASTY
Trigger: GTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCCA...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR CCA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGGCAGCCTGGGAACACTaGGGGTCTGGGGTTATCTTT +
Preference number: 4 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQAAWEH*GSGVIF
Trigger: AAAGATAACCCCAGACCCCCAGTGTTCCCAGGCTGC...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR TCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCCCTGCGCTAGCTCCATaGCAGCGCCGCGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSPALAP*QRRGGD
Trigger: GTCGCCGCCGCGGCGCTGTCATGGAGCTAGCGCAGG...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGTTCCCCGGATCTTCTTaGCAGTCCTCTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQFPGSS*QSSDCA
Trigger: TGCACAGTCAGAGGACTGTCAAGAAGATCCGGGGAA...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGCCCTCCTGGATGAGATaGACCATGGACGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSCKLCLPALELNCWKTGPSWMR*TMDGRV
Trigger: GACCCTGCCGTCCATGGTTCATCTCATCCAGGAGGG...CCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp TCCTTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGATCGTGCAGGGCCTTaGGCTCCGTCCACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: SLSCKLCLPALELNCWKTDRAGP*APSTGN
Trigger: GTTGCCTGTGGACGGAGCTCAAGGCCCTGCACGATC...TGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTTGTGGCTCAGCGCTATaGAGCTGGAGCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCCGSAL*SWSPLG
Trigger: CCCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACA...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTCAGCAGAACAGCACATaGGGGGACTGCAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCQQNST*GDCRCG
Trigger: CCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTG...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATAGGCAACTGCCACTCTaGCTGGGAATTTCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDRQLPL*LGISVS
Trigger: ACTTACTGAAATTCCCAGTCAGAGTGGCAGTTGCCT...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp AGCTGCCGACGTGAGGGATCCAAAGGTCACATCTACTTTGGCTTTCCTCTCCATAGGCAGAGGTTGCAGTaGGCTGAGTTCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: SCRREGSKGHIYFGFPLHRQRLQ*AEFMPL
Trigger: CAGTGGCATGAACTCAGCTCACTGCAACCTCTGCCT...ATGGAGAGGAAAGCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp CTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGCGGGTCACAGCAGCCCAAACTTCCAAATTTaGAAACTTACTGCAACACCA +
Preference number: 4 (lower is better)
Translates to: LQALVEFLDFCPQAGHSSPNFQI*KLTATP
Trigger: TGGTGTTGCAGTAAGTTTTCAAATTTGGAAGTTTGG...GCTGCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTAGTTCCCGCGCTTCCTaGGCTAGCTCCATGACAGCG +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFSSRAS*ASSMTA
Trigger: CGCTGTCATGGAGCTAGCGCAGGAAGCGCGGGAACT...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTGAGTGTGCTGACGTaGCTGCTCCATGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFLSVLT*LLHGRV
Trigger: GACACGGCCATGGAGCAGGCACGTCAGCACACTCAA...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCGGATCTCGGAGCGTATaGTGCTGTCTTCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFGSRSV*CCLRMA
Trigger: GGCCATGCGAAGACAGCAGCATACGCTCCGAGATCC...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TCCTTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGCTCCTTCAGGAGGGTaGTCCGCTGGGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: SLSCKLCLPALELNCWKTAPSGG*SAGRPA
Trigger: TGCTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGC...TGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTAGCAGGAGCTGCCGATaGCCAGCTGCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCSRSCR*PAASCS
Trigger: GCTGCAGGATGCAGCTGGGCATCGGCAGCTCCTGCT...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTCAGTGCAGGATCCGCTaGTGTTTGGCCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAQCRIR*CLACSS
Trigger: GGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTG...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTGTGCCGCAGCAGCGTaGCCAACAGAATGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFCAAAA*PTECGA
Trigger: TGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACA...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTGGGATGCCTGGATCTaGAGCAGCTCCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: KLCLPALELNCWKTGFSVWDAWI*SSSWVG
Trigger: TCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCA...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp TCCTTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACATCCCCCACGATCCCCTaGAGCTCAGGGATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: SLSCKLCLPALELNCWKTSPTIP*SSGIRS
Trigger: GGAGCGAATCCCTGAGCTGCAGGGGATCGTGGGGGA...TGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTCACCCCTGTTGCTCCTaGTCACCCCTTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: KLCLPALELNCWKTGFSVHPCCS*SPLDGA
Trigger: TGCTCCGTCAAGGGGTGAGCAGGAGCAACAGGGGTG...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGGCTGTTGCCTCCAGCTaGAAGCCCTTACTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLAVASS*KPLLSH
Trigger: GTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGC...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGAGGTCACATCTACTTTaGCTTTCCTCTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMRSHLL*LSSPCP
Trigger: AGGACATGGAGAGGAAAGCCAAAGTAGATGTGACCT...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCCTTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACACTGCCCCTCTTGGCCTaGGGAAGCAGGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLSCKLCLPALELNCWKTLPLLA*GSRRFC
Trigger: GCAGAACCTCCTGCTTCCCCAGGCCAAGAGGGGCAG...TGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGGTCATCATGAGGGGTTaGGAGGCTGCCCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LSCKLCLPALELNCWKTGVIMRG*EAAPLG
Trigger: GCCAAGAGGGGCAGCCTCCCAACCCCTCATGATGAC...CCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTAGCCAGGACGTGGCCTaGGGGGTGGTTTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCSQDVA*GVVCQQ
Trigger: CTGCTGACAAACCACCCCCCAGGCCACGTCCTGGCT...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGCCGGGGCCTGGGGTCTaGATATCTCTGTGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: LSCKLCLPALELNCWKTGPGPGV*ISLCRQ
Trigger: TTGGCGACACAGAGATATCCAGACCCCAGGCCCCGG...CCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCGGATCCGCTGCTGTTTaGCCTGTAGCTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFGSAAV*PVAPSA
Trigger: TGCTGAGGGAGCTACAGGCCAAACAGCAGCGGATCC...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGAGGAGCAGAAGGTCCTaGCGAAGAGAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGRSRRS*RREAAA
Trigger: GGCGGCTGCCTCTCTTCGCCAGGACCTTCTGCTCCT...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTGACTGCAGGTGCGGGTaGGGACGACTGCCGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCDCRCG*GRLPRN
Trigger: ATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTC...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp AGTTCCTGGATTTCTGCCCGCAGGCGGGTCACAGCAGCTTCCAGCTCTAACTTCATTAGCCAGATATGGTaGTGGGTGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: SSWISARRRVTAASSSNFISQIW*WVPVIP
Trigger: TGGGATTACAGGCACCCACCACCATATCTGGCTAAT...GAAGTTAGAGCTGGAAGCTGCTGTGACCCGCCTGCGGGCAGAAATCCAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp TGCTCCTGCTCACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCCTTTGCTTTATAAATTaGGTAACCCACGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: CSCSPLDGARPGQCGPQFLCFIN*VTHAVK
Trigger: TTTCACTGCGTGGGTTACTCAATTTATAAAGCAAAG...GAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGCTCCAGGCCCAGAGCTaGCGACGTGAGGGATCCAAA +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGLQAQS*RREGSK
Trigger: TTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAG...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGCAGTGCAGGATCCGCTaGTGTTTGGCCTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSCKLCLPALELNCWKTGQCRIR*CLACSS
Trigger: GGAGCTACAGGCCAAACAGCAGCGGATCCTGCACTG...CCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp GCTGAGCTAATGCTGTTTCCACTGGACTTTAAGCCCTATGAGGATGGAGATCAAACCAGCTGGCGCCAGTaGAGGATCCGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: AELMLFPLDFKPYEDGDQTSWRQ*RIRCCL
Trigger: CAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGT...TTGATCTCCATCCTCATAGGGCTTAAAGTCCAGTGGAAACAGCATTAGCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGCTCAGCCACCCCTGTTaGTCCTGCTCACCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGLSHPC*SCSPLD
Trigger: GTCAAGGGGTGAGCAGGAGCAACAGGGGTGGCTGAG...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCCAGGGCCTTTGCATGTaGTGTTGCCTCCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFQGLCM*CCLQLQ
Trigger: TTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCTG...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTTCCTCAGTTGATCCCTaGCACCCACCTTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFASSVDP*HPPSLR
Trigger: TCTGAGGGAAGGTGGGTGGCAGGGATCAACTGAGGA...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGAGTGAGCTGAGTTCATaGCACTGCACTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMSELSS*HCTSAW
Trigger: CCAGGCTGAAGTGCAGTGGCATGAACTCAGCTCACT...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGTGTGGACTGTCCTGGTaGCCATACCAGAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQCGLSW*PYQSRF
Trigger: AAACCTACTCTGGTATGGCCACCAGGACAGTCCACA...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGGGGACCACCTTTCGCTaGACCAGAGCTAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGGTTFR*TRASTS
Trigger: GGAGGTGCTAGCTCTGGTCCAGCGAAAGGTGGTCCC...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTGGCCTGGCGGCAGGCTaGTCTTCATGTGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFGLAAG*SSCGVD
Trigger: ATCTACTCCACATGAAGACCAGCCTGCCGCCAGGCC...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGGGGCAGGAGGAAAGCTaGGAGAGTAAAGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLGQEES*ESKGTL
Trigger: CAGAGTCCCTTTACTCTCCCAGCTTTCCTCCTGCCC...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGCATCACCCAGCACCTaGTTGGGCTTAGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAASPST*LGLEQK
Trigger: CTTCTGCTCTAAGCCCAACCAGGTGCTGGGTGATGC...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR TCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGCCAGAGCTGCCGACGTaGGGGATCCAAAGGTCACAT +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGPELPT*GIQRSH
Trigger: ATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGG...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTGGTGAGGTGTTGGGGTaGACAGTGTCAAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFGEVLG*TVSSSR
Trigger: CCGAGAACTTGACACTGTTCACCCCAACACCTCACC...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TCCTTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACATGTCTCCTCCTCAGTTaGTCCCTGCCACCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SLSCKLCLPALELNCWKTCLLLS*SLPPTF
Trigger: GAAGGTGGGTGGCAGGGATCAACTGAGGAGGAGACA...TGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp GTGTCTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAATCTTGGTCCCCAATaGCATTACATCACTACTTAT +
Preference number: 4 (lower is better)
Translates to: VSRSISSRLWSSSWISARNLGPQ*HYITTY
Trigger: ATAAGTAGTGATGTAATGTCATTGGGGACCAAGATT...GCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTACACATCCCACCCCCTaGTGGATTTCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFTHPTP*WISHTA
Trigger: TGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGT...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGATCCCTCAGAGGCAACTaGCACTCTGACTGGGAATTT +
Preference number: 4 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRSLRGN*HSDWEF
Trigger: AAATTCCCAGTCAGAGTGGCAGTTGCCTCTGAGGGA...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCCTCAGTTGATCCCTaGCACCCACCTTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: KLCLPALELNCWKTGFSVSSVDP*HPPSLR
Trigger: TCTGAGGGAAGGTGGGTGGCAGGGATCAACTGAGGA...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCCACTCTCCCGGCCTGTaGCGCAGCAGCGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSHSPGL*RSSVPN
Trigger: GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTG...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR CCA 90 bp GGAATGACACATGGAGAGTTAAATACAAAGCAGGTCTGGAGAGAAGCCAGATATGACGTGCCTGCTCCATaGCCGTGTCCTGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GMTHGELNTKQVWREARYDVPAP*PCPEPQ
Trigger: CTGAGGCTCAGGACACGGCCATGGAGCAGGCACGTC...ATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGTTCTGCTGTTTTTCCTaGGATGCCTGGATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMFCCFS*DAWICS
Trigger: GCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAA...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGGGGAGGTGAGGTGTTaGGGTGAACAGTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAGEVRC*GEQCQV
Trigger: AACTTGACACTGTTCACCCCAACACCTCACCTCCCC...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAACTGCCGAGGAATCCTaGCGCTGCTTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRTAEES*RCFLPN
Trigger: ATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGT...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGGGTCCAGGAGCTGAGTaGGGCAGCAGAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGGPGAE*GSRTAH
Trigger: ATGTGCTGTTCTGCTGCCCCACTCAGCTCCTGGACC...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTGGTCCAGGAGCTGAGTaGGGCAGCAGAACAGCACAT +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCGPGAE*GSRTAH
Trigger: ATGTGCTGTTCTGCTGCCCCACTCAGCTCCTGGACC...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGATATTGCAGCACATCCTaGCTCAGGGCCTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRYCSTS*LRAFAC
Trigger: ACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATA...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGCCATTTCAGATATaGCAATGTGGTCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLQPFQI*QCGQAR
Trigger: CCGCGCCTGACCACATTGCCATATCTGAAATGGCTG...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TGGCGCTGCTTTCTTCCAAATGTCCTGGGGGAGGTGAGGTGTTGGGGTGAACAGACACTAAGGACTACATaGGAAAGCCAATGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: WRCFLPNVLGEVRCWGEQTLRTT*ESQCGK
Trigger: CTTTCCACATTGGCTTTCCCATGTAGTCCTTAGTGT...CTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCACTTCAAGGTGGGTCTaGGGACTAGGATGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFTSRWV*GLGCQD
Trigger: GTCTTGGCATCCTAGTCCCCAGACCCACCTTGAAGT...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR TCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCCTAAAAGTACAAAAATaGGCTGGGCGTGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFLKVQK*AGRGGA
Trigger: CGCACCACCACGCCCAGCTCATTTTTGTACTTTTAG...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGGGCGATAGAATCACTTaGGGCCAGGAGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGGDRIT*GQELES
Trigger: GCTCTCCAACTCCTGGCCTCAAGTGATTCTATCGCC...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp AAGCACCTAAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTTTTGTTGAGTTCAGTTaGAGGTGGGGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: KHLRESSHFRYGNVVRRGFVEFS*RWGLGT
Trigger: AGTTCCCAGCCCCCACCTTCAACTGAACTCAACAAA...ACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTTTTGTTGAGTTCAGTTaGAGGTGGGGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAFVEFS*RWGLGT
Trigger: AGTTCCCAGCCCCCACCTTCAACTGAACTCAACAAA...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCAATCTTGGTCCCCAATaGCATTACATCACTACTTAT +
Preference number: 4 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPNLGPQ*HYITTY
Trigger: ATAAGTAGTGATGTAATGTCATTGGGGACCAAGATT...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGTGAGAGATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTACTGGGCCCGGAGGGTaGAGGCTGTTCGGACATCAC +
Preference number: 4 (lower is better)
Translates to: CERWTARFKIIKLPNFQITGPGG*RLFGHH
Trigger: GTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGT...AATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp AAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTGGCTCATGACTGCTGGTACGAAGTaGCAAAGTGGTCATCATGAG +
Preference number: 4 (lower is better)
Translates to: KRIQPFQIWQCGQARWLMTAGTK*QSGHHE
Trigger: CTCATGATGACCACTTTGGCACTTCGTACCAGCAGT...CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp AAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTCTGTTTTTCCTGGGATaGCTGGATCTGCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLCLPALELNCWKTGFSVLFFLG*LDLQQL
Trigger: GAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAG...AACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGACCTGTGGACTGTCCTaGTGGCCATACCAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGTCGLS*WPYQSR
Trigger: CCTACTCTGGTATGGCCACCAGGACAGTCCACAGGT...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TGTGAGAGATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTGCCAGCCCTCCTGGATaGGATGAACCATGGACGGCA +
Preference number: 4 (lower is better)
Translates to: CERWTARFKIIKLPNFQIASPPG*DEPWTA
Trigger: TGCCGTCCATGGTTCATCTCATCCAGGAGGGCTGGC...AATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGTTCTCGGCTTCCGTTTaGACCCTCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGFSASV*TLSSAA
Trigger: TGCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAA...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGGAGGTTGCAGTGAGCTaGGTTCATGCCACTGCACTT +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGEVAVS*VHATAL
Trigger: AAGTGCAGTGGCATGAACTCAGCTCACTGCAACCTC...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTACTAATCCCAGCAGGTaGAGATTTGGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCTNPSR*RFGRQR
Trigger: CCTCTGCCTCCCAAATCTTCACCTGCTGGGATTAGT...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp GCTGAGCTAATGCTGTTTCCACTGGACTTTAAGCCCTATGAGGATGGAGATCAAACTGAGCTCAGCCACTaGTGGTACGAAGTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AELMLFPLDFKPYEDGDQTELSH*WYEVPK
Trigger: CTTTGGCACTTCGTACCAGCAGTGGCTGAGCTCAGT...TTGATCTCCATCCTCATAGGGCTTAAAGTCCAGTGGAAACAGCATTAGCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFEESWR*FLPNVL
Trigger: CAGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTC...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGGCCCTAGAACTCAACTaGTGGAAGACAGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLALELN*WKTGFS
Trigger: AGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGC...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGCCCTAGAACTCAACTaGTGGAAGACAGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFAALELN*WKTGFS
Trigger: AGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGC...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTGTGGACTGTCCTGGTaGCCATACCAGAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFCGLSW*PYQSRF
Trigger: AAACCTACTCTGGTATGGCCACCAGGACAGTCCACA...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCAGCCAGGACGTGGCCTaGGGGGTGGTTTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSSQDVA*GVVCQQ
Trigger: CTGCTGACAAACCACCCCCCAGGCCACGTCCTGGCT...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCAGGAGGGTGCTCCGCTaGGAGACCAGCACACCCACA +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSRRVLR*ETSTPT
Trigger: TGTGGGTGTGCTGGTCTCCCAGCGGAGCACCCTCCT...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCTTATCAGAGAGGGCGGCCTaGCCTGGCTGCTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: WISHTAVNLQHTTYIFSLSERAA*PGCSHQ
Trigger: CTGGTGGGAGCAGCCAGGCCAGGCCGCCCTCTCTGA...TAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGGGGGAGGTGAGGTGTTaGGGTGAACAGTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGGEVRC*GEQCQV
Trigger: AACTTGACACTGTTCACCCCAACACCTCACCTCCCC...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
49% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCGACTGCAGGTGCGGGTaGGGACGACTGCCGAGGAAT +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSDCRCG*GRLPRN
Trigger: ATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTC...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTCAGCCATTTCAGATATaGCAATGTGGTCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCQPFQI*QCGQAR
Trigger: CCGCGCCTGACCACATTGCCATATCTGAAATGGCTG...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp GGAATGACACATGGAGAGTTAAATACAAAGCAGGTCTGGAGAGAAGCCAGATATCCAATGTGGAAAGGCTaGGAAACAGCAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GMTHGELNTKQVWREARYPMWKG*ETAARG
Trigger: GCCCCTGGCTGCTGTTTCCCAGCCTTTCCACATTGG...ATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCCAGCAGCGTCTCCACTaGGCTCAGCCACTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSQQRLH*AQPLLV
Trigger: TACCAGCAGTGGCTGAGCTCAGTGGAGACGCTGCTG...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR TCA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTCAACTACATGAGCTCTaGCAAATCTCTACACCTGCG +
Preference number: 4 (lower is better)
Translates to: SCKLCLPALELNCWKTGFQLHEL*QISTPA
Trigger: CGCAGGTGTAGAGATTTGTCAGAGCTCATGTAGTTG...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGTGAGAGATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTTCTCGGAGCGTATGCTaGTGTCTTCGCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: CERWTARFKIIKLPNFQISRSVC*CLRMAP
Trigger: TGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGA...AATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCTTAAACTCTCCCGGCCTGTaGCGCAGCAGCGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: WISHTAVNLQHTTYIFSLNSPGL*RSSVPN
Trigger: GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTT...TAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCTTACTTGGGGACGCGGGGTaGAGCTGGTGGATGGATGGG +
Preference number: 4 (lower is better)
Translates to: WISHTAVNLQHTTYIFSLLGDAG*SWWMDG
Trigger: CCCATCCATCCACCAGCTGCACCCCGCGTCCCCAAG...TAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR GCA 90 bp TGTGAGAGATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTGCTGTTGCCTCCAGCTaGAAGCCCTTACTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CERWTARFKIIKLPNFQIAVASS*KPLLSH
Trigger: GTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGC...AATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTTGTGGACTGTCCTGGTaGCCATACCAGAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCCGLSW*PYQSRF
Trigger: AAACCTACTCTGGTATGGCCACCAGGACAGTCCACA...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAACAGCTGGTGGATGGATaGGAGGACCGTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKQLVDG*EDRGQG
Trigger: CCCCTGCCCACGGTCCTCCCATCCATCCACCAGCTG...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCTGTAGGAATGACACATaGAGAGTTAAATACAAAGCA +
Preference number: 4 (lower is better)
Translates to: FACAVASSCKPLLSHPCCCRNDT*RVKYKA
Trigger: TGCTTTGTATTTAACTCTCCATGTGTCATTCCTACA...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGAGAGTAAAGGGACTCTaGAGGCCAAGAGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGRVKGL*RPREEL
Trigger: CAACTCCTCTCTTGGCCTCCAGAGTCCCTTTACTCT...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGTATGCTTCTCACCTGTaGACTGTCCTGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGYASHL*TVLVAI
Trigger: TATGGCCACCAGGACAGTCCACAGGTGAGAAGCATA...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR GCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCCTCCCGGCTCTGTGGTaGCACTGCCTCAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSLPALW*HCLKCR
Trigger: CCTACATTTGAGGCAGTGGCACCACAGAGCCGGGAG...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCACACTAAGGACTACATaGGAAAGCCAATGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFTLRTT*ESQCGK
Trigger: CTTTCCACATTGGCTTTCCCATGTAGTCCTTAGTGT...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCACACATCCCACCCCCTaGTGGATTTCCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSTHPTP*WISHTA
Trigger: TGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGT...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR GCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAACACCCCTGTTGCTCCTaGTCACCCCTTGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKHPCCS*SPLDGA
Trigger: TGCTCCGTCAAGGGGTGAGCAGGAGCAACAGGGGTG...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAAGCACCTGCCTCTCACTaGATCCCAGGACGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKAPASH*IPGRVS
Trigger: AGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGC...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TTTAATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGAATACAAAGCAGGTCTaGAGAGAAGCCAGATATAAC +
Preference number: 4 (lower is better)
Translates to: FNTFLTPNLHCPPQWPLLNTKQV*REARYN
Trigger: GTTATATCTGGCTTCTCTCCAGACCTGCTTTGTATT...CAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGGAGTTGTGTGAGAGATaGACAGCAAGGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGELCER*TARFKI
Trigger: GATCTTGAACCTTGCTGTCCATCTCTCACACAACTC...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCCTTTGCTTTATAAATTaGGTAACCCACGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFLCFIN*VTHAVK
Trigger: TTTCACTGCGTGGGTTACTCAATTTATAAAGCAAAG...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR TCA 90 bp TGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCTTAGGCATGAGAATGGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WISHTAVNLQHTTYIFSLGMRMA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCCATTCTCATGCC...TAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAATCTGCAGCCGCTGCATaGGATCTCGGAGCGTATGCT +
Preference number: 4 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKSAAAA*DLGAYA
Trigger: AGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGA...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TGTGAGAGATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTACTGCCGAGGAATCCTaGCGCTGCTTTCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: CERWTARFKIIKLPNFQITAEES*RCFLPN
Trigger: ATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGT...AATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCTTAGTCCGCCAGCCCTCCTaGATATCTCTGTGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: WISHTAVNLQHTTYIFSLVRQPS*ISLCRQ
Trigger: TTGGCGACACAGAGATATCCAGGAGGGCTGGCGGAC...TAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR TCA 90 bp TGTGAGAGATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTAAGAGAGGAGTTGTGTaGGAGATGGACAGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: CERWTARFKIIKLPNFQIKRGVV*EMDSKV
Trigger: AACCTTGCTGTCCATCTCTCACACAACTCCTCTCTT...AATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCTTAGAGCTCAGCCACTGCTaGTACGAAGTGCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: WISHTAVNLQHTTYIFSLELSHC*YEVPKW
Trigger: CCACTTTGGCACTTCGTACCAGCAGTGGCTGAGCTC...TAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCACGACCTGGGCAGTGTaGCCCTCAATTCAAATCACA +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSTTWAV*PSIQIT
Trigger: TGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGT...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTGTAGGAATGACACATaGAGAGTTAAATACAAAGCA +
Preference number: 4 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFCRNDT*RVKYKA
Trigger: TGCTTTGTATTTAACTCTCCATGTGTCATTCCTACA...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CCA 90 bp TGTGAGAGATGGACAGCAAGGTTCAAGATCATAAAGCTGCCAAACTTCCAAATTATTAGCCAGATATGGTaGTGGGTGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: CERWTARFKIIKLPNFQIISQIW*WVPVIP
Trigger: TGGGATTACAGGCACCCACCACCATATCTGGCTAAT...AATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
3UTR CAA 72 bp CCCACCCCCTGCTGGATTTCCCACACAGCAGTTAACTaGCAGCATACTACATATATATTTTCCTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: PTPCWISHTAVN*QHTTYIFSLSC
Trigger: ACAAGATAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCAGGGGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR TCA 90 bp CGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGAATGAAAGTGATGAAGGGGCCAAACTTCCAAATTTaGAAACTTACTGCAACACCA +
Preference number: 4 (lower is better)
Translates to: RLEEVLNYFLLRMKVMKGPNFQI*KLTATP
Trigger: TGGTGTTGCAGTAAGTTTTCAAATTTGGAAGTTTGG...CCCCTTCATCACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp TGCTGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCGCCCTAGAACTCAACTaGTGGAAGACAGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CWISHTAVNLQHTTYIFSALELN*WKTGFS
Trigger: AGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGC...GGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CCA 90 bp TGGATTTCCCACACAGCAGTTAACTTGCAGCATACTACATATATATTTTCCTTAAGAGTAAAGGGACTCTaGAGGCCAAGAGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: WISHTAVNLQHTTYIFSLRVKGL*RPREEL
Trigger: CAACTCCTCTCTTGGCCTCCAGAGTCCCTTTACTCT...TAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR GCA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAAACTGCTGGTACGAAGTaGCAAAGTGGTCATCATGAG +
Preference number: 4 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKTAGTK*QSGHHE
Trigger: CTCATGATGACCACTTTGGCACTTCGTACCAGCAGT...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS CCA 90 bp CCGAGGCCTGGAGGAGGAGGGAAGGACGGTCACCTGGGGCGGGGCTaGGGAGACAAGTCACAGGAGACGGGCACTCACCTTCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PRPGGGGKDGHLGRG*GDKSQETGTHLPWR
Trigger: CCTCCAGGGAAGGTGAGTGCCCGTCTCCTGTGACTTGTCTCCCCAGCCCCGCCCCAGGTGACCGTCCTTCCCTCCTCCTCCAGGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430749.2
CDS-3UTR CAA 90 bp ACCGTGGGCAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACCGGCACAGGCGGGTCTaGCTGGCCGAGTTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: TVGRGFNSPGLCRSSVPNRHRRV*LAEFPL
Trigger: CAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCG...GTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp CTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTTGATGAGCGGCACAGGCGGGTCTaGCTGGCCGAGTTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LPRAPAQAGLAGRVSLDERHRRV*LAEFPL
Trigger: CAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCG...CTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp GGATGGGAGGACCGTGGGCAGGGGCTTCAACCTACGGGCGGGGAGAAGTCTGGGGGTCATCATGAGGGGTaGGGAGGCTGCCCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: GWEDRGQGLQPTGGEKSGGHHEG*GGCPSW
Trigger: CCAAGAGGGGCAGCCTCCCAACCCCTCATGATGACC...CCCAGACTTCTCCCCGCCCGTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR CAA 90 bp ATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCGGAGGCAGCCCCAGCTaGTGGCTCAGCGCTATGAAG +
Preference number: 5 (lower is better)
Translates to: MRGLQVRVGTTAEESWRCGGSPS*WLSAMK
Trigger: CTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCC...GCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp ATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCCTGGCCGAGTTTCCCTaGATGAGCAGGCGGACCTGT +
Preference number: 5 (lower is better)
Translates to: MRGLQVRVGTTAEESWRCLAEFP*MSRRTC
Trigger: ACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAG...GCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS CCA 90 bp AGGCGCTGGGTCAAGACTTGCCGCTCCTTCAGGAGGGTGCTCCGCTaGGAGACCAGCACACCCACAGTCCGCCAGCCCTCCTGGATATCT +
Preference number: 5 (lower is better)
Translates to: RRWVKTCRSFRRVLR*ETSTPTVRQPSWIS
Trigger: AGATATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR CAA 90 bp AGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTGCTTTAGGATCCGCTGCTGTTaGGCCTGTAGCTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RGLQVRVGTTAEESWRCFRIRCC*ACSSLS
Trigger: GCTGAGGGAGCTACAGGCCAAACAGCAGCGGATCCT...AAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp CCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGGAGGATCCGCTGCTGTTaGGCCTGTAGCTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: PGGSPSLWLSAMKLEPLGRIRCC*ACSSLS
Trigger: GCTGAGGGAGCTACAGGCCAAACAGCAGCGGATCCT...CCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp TGCTCCTGCTCACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCGCGCTGGGTCAAGACTaGCCGCTCCTTCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: CSCSPLDGARPGQCGPQFALGQD*PLLQEG
Trigger: ACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGC...GAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp GATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGGACTGGCCGAGTTTCCCTaGATGAGCAGGCGGACCTGT +
Preference number: 5 (lower is better)
Translates to: DLGAYAAVFAWPQLGPGGLAEFP*MSRRTC
Trigger: ACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAG...TCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp GTGTCTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCGCGCTGGGTCAAGACTaGCCGCTCCTTCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: VSRSISSRLWSSSWISARALGQD*PLLQEG
Trigger: ACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGC...GCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCAGGAGGCAGCCCCAGCTaGTGGCTCAGCGCTATGAAG +
Preference number: 5 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPGGSPS*WLSAMK
Trigger: CTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCC...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp CCTGGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAAGCTGGAGCCCCTTGGGTCACCCAGCACCTGGTaGGGCTTAGAGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: PGGSPSLWLSAMKLEPLGSPSTW*GLEQKI
Trigger: GATCTTCTGCTCTAAGCCCAACCAGGTGCTGGGTGA...CCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp TGGATTTCTGCCCGCAGGCGGGTCACAGCAGCTTCCAGCTCTAACTTCCGACGGCTGCAGGCGCCTCAGTaGATTCTGCAGCCGCTGCAT +
Preference number: 5 (lower is better)
Translates to: WISARRRVTAASSSNFRRLQAPQ*ILQPLH
Trigger: ATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAG...CCGTCGGAAGTTAGAGCTGGAAGCTGCTGTGACCCGCCTGCGGGCAGAAATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp GTGTCTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCAGGATCCGCTGCTGTTaGGCCTGTAGCTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: VSRSISSRLWSSSWISARRIRCC*ACSSLS
Trigger: GCTGAGGGAGCTACAGGCCAAACAGCAGCGGATCCT...GCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACACGGCACAGGCGGGTCTaGCTGGCCGAGTTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTRHRRV*LAEFPL
Trigger: CAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCG...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp CAGGGGCTTCAACTCTCCCGGCCTGTGCCGCAGCAGCGTGCCCAACAGAATGTGCCAGCAGGTGAAGATTaGGGAGGCAGAGGCGATAGA +
Preference number: 5 (lower is better)
Translates to: QGLQLSRPVPQQRAQQNVPAGED*GGRGDR
Trigger: TCTATCGCCTCTGCCTCCCAAATCTTCACCTGCTGG...CACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp TTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTGCGGTCATCATGAGGGGTaGGGAGGCTGCCCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: FACAVASSCKPLLSHPCCGHHEG*GGCPSW
Trigger: CCAAGAGGGGCAGCCTCCCAACCCCTCATGATGACC...GCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACAGGAGGCAGCCCCAGCTaGTGGCTCAGCGCTATGAAG +
Preference number: 5 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTGGSPS*WLSAMK
Trigger: CTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCC...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CAA 90 bp CTAGCACCTCCCCCGGGCTCCGGCACAGGCGGGTCTTGCTGGCCGAGTTTCCCTGGTTTTCTGTTTCTTTaGTTCAGTGTGGACTCCCCA +
Preference number: 5 (lower is better)
Translates to: LAPPPGSGTGGSCWPSFPGFLFL*FSVDSP
Trigger: TGGGGAGTCCACACTGAACAAAAGAAACAGAAAACC...AGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp GTGTCTCGCTCCATCAGCTCCAGGCTCTGGTCGAGTTCCTGGATTTCTGCCCGCCCTTTGCATGTGCTGTaGCCTCCAGCTGCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: VSRSISSRLWSSSWISARPLHVL*PPAASP
Trigger: AGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGG...GCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTCCTTTGCATGTGCTGTaGCCTCCAGCTGCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: GPLHVLLPPAASPYSATPPLHVL*PPAASP
Trigger: AGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGG...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CAA 90 bp GTATCAGCACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCAGTTCTCGGCTTCCGTTaGAACCCTCTCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VSAPASHWIPGRVSPPPPVLGFR*NPLFSC
Trigger: GCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAAC...TGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTTCTCGGCTTCCGTTaGAACCCTCTCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GPLHVLLPPAASPYSATPVLGFR*NPLFSC
Trigger: GCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAAC...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp ACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCCTTTGCATGTGCTGTaGCCTCCAGCTGCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: TEHDLGSVALNSNHTSHPPLHVL*PPAASP
Trigger: AGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGG...GGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CAA 90 bp ATCTCGGAGCGTATGCTGCTGTCTTCGCATGGCCCCAGCTTGGGCCCGGAGGAGAAGGTCACATCTACTTaGGCTTTCCTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: ISERMLLSSHGPSLGPEEKVTST*AFLSMS
Trigger: GGACATGGAGAGGAAAGCCAAAGTAGATGTGACCTT...CTCCTCCGGGCCCAAGCTGGGGCCATGCGAAGACAGCAGCATACGCTCCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp AATACATTCCTCACCCCCAACCTACACTGTCCCCCTCAGTGGCCCTTATTGCAGGGAGGCAGCCCCAGCTaGTGGCTCAGCGCTATGAAG +
Preference number: 5 (lower is better)
Translates to: NTFLTPNLHCPPQWPLLQGGSPS*WLSAMK
Trigger: CTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCC...CTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CAA 90 bp GACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATCTGTCTTGTGACCCATaGTCCCCAGCATCACCCAGC +
Preference number: 5 (lower is better)
Translates to: DLGSVALNSNHTSHPLLDLSCDP*SPASPS
Trigger: GCTGGGTGATGCTGGGGACAATGGGTCACAAGACAG...ATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp GGATGGGAGGACCGTGGGCAGGGGCTTCAACCTACGGGCGGGGAGAAGTCTGGGGTGCTCAATTACTTTTaGCTGAGAATGAAAGTGATG +
Preference number: 5 (lower is better)
Translates to: GWEDRGQGLQPTGGEKSGVLNYF*LRMKVM
Trigger: CATCACTTTCATTCTCAGCAAAAAGTAATTGAGCAC...CCCAGACTTCTCCCCGCCCGTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587439.5
CDS-3UTR CAA 90 bp CCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGATTTCCAGCAGGTGAAGATTaGGGAGGCAGAGGCGATAGA +
Preference number: 5 (lower is better)
Translates to: PGQCGPQFKSHIPPPAGFPAGED*GGRGDR
Trigger: TCTATCGCCTCTGCCTCCCAAATCTTCACCTGCTGG...AAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CAA 90 bp GGCAGCAGAACAGCACATGAGGGGACTGCAGGTGCGGGTGGGGACGACTGCCGAAAGTTGAAGATTTTGTaGAGTTCAGTTGAAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GSRTAHEGTAGAGGDDCRKLKIL*SSVEGG
Trigger: CCCACCTTCAACTGAACTCAACAAAATCTTCAACTT...TCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CAA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCCTGCAGGCGCCTCAGTaGATTCTGCAGCCGCTGCAT +
Preference number: 5 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFLQAPQ*ILQPLH
Trigger: ATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAG...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp ACCTGCCTCTCACTGGATCCCAGGACGCGTCTCTCCACCTCCTCCACCAGGCCCGTGCTCAATTACTTTTaGCTGAGAATGAAAGTGATG +
Preference number: 5 (lower is better)
Translates to: TCLSLDPRTRLSTSSTRPVLNYF*LRMKVM
Trigger: CATCACTTTCATTCTCAGCAAAAAGTAATTGAGCAC...GGGCCTGGTGGAGGAGGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp TCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTGAGACCTTTGCATGTGCTGTaGCCTCCAGCTGCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: SVWTPQRLEEVLNYFLLRPLHVL*PPAASP
Trigger: AGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGG...TCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp CCGGAGGAGGAGAGCTCGACGCTGGGTGTCTTGAGTGTGCTGACGTGCCTGCTCGCTTTGCTTTATAAATaGAGTAACCCACGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: PEEESSTLGVLSVLTCLLALLYK*SNPRSE
Trigger: TTCACTGCGTGGGTTACTCAATTTATAAAGCAAAGC...GAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS GCA 90 bp AGTTACCAGAGTAGGTTTCCCCGGATCTTCTTGACAGTCCTACAGTaGAGAGGCAGAAAGAGGAGTTACTATGGGCCTCACCTGTGCCCC +
Preference number: 5 (lower is better)
Translates to: SYQSRFPRIFLTVLQ*RGRKRSYYGPHLCP
Trigger: GGGGCACAGGTGAGGCCCATAGTAACTCCTCTTTCTGCCTCTGCACTGTAGGACTGTCAAGAAGATCCGGGGAAACCTACTCTGGTAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588570.5
CDS-3UTR CAA 90 bp CACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACAAAGGTCACATCTACTTaGGCTTTCCTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: HPLTEHDLGSVALNSNHTKVTST*AFLSMS
Trigger: GGACATGGAGAGGAAAGCCAAAGTAGATGTGACCTT...TGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTGCGCTGGGTCAAGACTaGCCGCTCCTTCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCALGQD*PLLQEG
Trigger: ACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGC...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp TCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTCTGGCCGAGTTTCCCTaGATGAGCAGGCGGACCTGT +
Preference number: 5 (lower is better)
Translates to: SCKLCLPALELNCWKTGFLAEFP*MSRRTC
Trigger: ACAGGTCCGCCTGCTCATCAAGGGAAACTCGGCCAG...AAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp AGCACGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCGGTTTTCTGTTTCTTTaGTTCAGTGTGGACTCCCCA +
Preference number: 5 (lower is better)
Translates to: STTWAVWPSIQITHPTPCGFLFL*FSVDSP
Trigger: TGGGGAGTCCACACTGAACAAAAGAAACAGAAAACC...GCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CAA 90 bp CGACCTGGGCAGTGTGGCCCTCAATTCAAATCACACATCCCACCCCCTGCTGGAGGTTTTCTGTTTCTTTaGTTCAGTGTGGACTCCCCA +
Preference number: 5 (lower is better)
Translates to: RPGQCGPQFKSHIPPPAGGFLFL*FSVDSP
Trigger: TGGGGAGTCCACACTGAACAAAAGAAACAGAAAACC...TCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CAA 90 bp TGCTCCTGCTCACCCCTTGACGGAGCACGACCTGGGCAGTGTGGCCCTCAATTCAAGTTGAAGATTTTGTaGAGTTCAGTTGAAGGTGGG +
Preference number: 5 (lower is better)
Translates to: CSCSPLDGARPGQCGPQFKLKIL*SSVEGG
Trigger: CCCACCTTCAACTGAACTCAACAAAATCTTCAACTT...GAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CAA 90 bp GGGCCTTTGCATGTGCTGTTGCCTCCAGCTGCAAGCCCTTACTCAGCCACCCCTGTGCTCAATTACTTTTaGCTGAGAATGAAAGTGATG +
Preference number: 5 (lower is better)
Translates to: GPLHVLLPPAASPYSATPVLNYF*LRMKVM
Trigger: CATCACTTTCATTCTCAGCAAAAAGTAATTGAGCAC...AGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CAA 90 bp TTTCCTCTCCATGTCCTGCAGGCGCCTCAGTTGATTCTGCAGCCGCTGCATGGGGCCAAACTTCCAAATTaGAAAACTTACTGCAACACC +
Preference number: 5 (lower is better)
Translates to: FPLHVLQAPQLILQPLHGAKLPN*KTYCNT
Trigger: GGTGTTGCAGTAAGTTTTCAAATTTGGAAGTTTGGC...CCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGGACATGGAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp TCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCTTTTGTGTTCTCGGCTTCCGTTaGAACCCTCTCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPCPRTQLLEDRVFCFFCVLGFR*NPLFSC
Trigger: GCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAAC...ACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
CDS-3UTR CAA 90 bp TGTCCCCCTCAGTGGCCCTTATTGCAGCACATCCTGGCTCAGGGCCTTTGCATGGTGCTCAATTACTTTTaGCTGAGAATGAAAGTGATG +
Preference number: 5 (lower is better)
Translates to: CPPQWPLLQHILAQGLCMVLNYF*LRMKVM
Trigger: CATCACTTTCATTCTCAGCAAAAAGTAATTGAGCAC...CATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000587439.5
ENST00000590994.1
CDS-3UTR CAA 90 bp TTGTTCAGTGTGGACTCCCCAGCGCCTAGAGGAGGTGCTCAATTACTTTTTGCTAGACATGAGAATTGTTaGAATCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LFSVDSPAPRGGAQLLFARHENC*NPGGRG
Trigger: ACCTCTGCCTCCTGGATTCAAACAATTCTCATGTCT...AGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CAA 90 bp AAGCACCTAAGAGAATCCAGCCATTTCAGATATGGCAATGTGGTCAGGCGCGGTAGACATGAGAATTGTTaGAATCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: KHLRESSHFRYGNVVRRGRHENC*NPGGRG
Trigger: ACCTCTGCCTCCTGGATTCAAACAATTCTCATGTCT...ACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS CCA 90 bp ATTTTTCGGATGAAAGAGAATCTTGTAGCATATGCTTCTCACCTGTaGACTGTCCTGGTGGCCATACCTAGGAAAACGAGGCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: IFRMKENLVAYASHL*TVLVAIPRKTRPES
Trigger: TGACTCTGGCCTCGTTTTCCTAGGTATGGCCACCAGGACAGTCCACAGGTGAGAAGCATATGCTACAAGATTCTCTTTCATCCGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588570.5
CDS-3UTR CAA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAAGGTCATCATGAGGGGTaGGGAGGCTGCCCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKGHHEG*GGCPSW
Trigger: CCAAGAGGGGCAGCCTCCCAACCCCTCATGATGACC...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CAA 90 bp CAAGCCTTTCTATTAAGCTACTGTAGGAATGACACATGGAGAGTTAAATACAAACTGCAGGCGCCTCAGTaGATTCTGCAGCCGCTGCAT +
Preference number: 5 (lower is better)
Translates to: QAFLLSYCRNDTWRVKYKLQAPQ*ILQPLH
Trigger: ATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAG...TTTGTATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS-3UTR CAA 90 bp ACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGGGTTTTCTGTTTCGCTTTGCTTTATAAATaGAGTAACCCACGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: TLSPCPRTQLLEDRVFCFALLYK*SNPRSE
Trigger: TTCACTGCGTGGGTTACTCAATTTATAAAGCAAAGC...GAAACAGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS GCA 90 bp AGATCTACAAGTCATTTTTCGGATGAAAGAGAATCTTGTAGCATATaGTTCTCACCTGTGGACTGTCCTGGTGGCCATACCAGAGTAGGT +
Preference number: 5 (lower is better)
Translates to: RSTSHFSDERESCSI*FSPVDCPGGHTRVG
Trigger: ACCTACTCTGGTATGGCCACCAGGACAGTCCACAGGTGAGAAGCATATGCTACAAGATTCTCTTTCATCCGAAAAATGACTTGTAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424522.5
CDS-3UTR CAA 90 bp TCCTTATCTTGTAAACTCTGTCTCCCTGCCCTAGAACTCAACTGCTGGAAGACAGCCAAACTTCCAAATTaGAAAACTTACTGCAACACC +
Preference number: 5 (lower is better)
Translates to: SLSCKLCLPALELNCWKTAKLPN*KTYCNT
Trigger: GGTGTTGCAGTAAGTTTTCAAATTTGGAAGTTTGGC...TGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000203166.10
ENST00000424522.5
CDS GCA 72 bp TCTTCGACCGCCCAGCAACCCAGTTCCCGCGCTTCCTaGGCTAGCTCCATGACAGCGCCGCGGCGGCGACAC +
Preference number: 6 (lower is better)
Translates to: SSTAQQPSSRAS*ASSMTAPRRRH
Trigger: GTGTCGCCGCCGCGGCGCTGTCATGGAGCTAGCGCAGGAAGCGCGGGAACTGGGTTGCTGGGCGGTCGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000203166.10
ENST00000424522.5
ENST00000585968.5
ENST00000587439.5
ENST00000588570.5
ENST00000592291.5
CDS CCA 72 bp GGAGGAGGAGGGAAGGACGGTCACCTGGGGCGGGGCTaGGGAGACAAGTCACAGGAGACGGGCACTCACCTT +
Preference number: 6 (lower is better)
Translates to: GGGGKDGHLGRG*GDKSQETGTHL
Trigger: AAGGTGAGTGCCCGTCTCCTGTGACTTGTCTCCCCAGCCCCGCCCCAGGTGACCGTCCTTCCCTCCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430749.2
CDS GCA 72 bp GTGCGGGTGGGGACGACTGCCGAGGAATCCTGGCGCTaGTTTCTTCCAAATGTCCAGTCCCCCACGATCCCC +
Preference number: 6 (lower is better)
Translates to: VRVGTTAEESWR*FLPNVQSPTIP
Trigger: GGGGATCGTGGGGGACTGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590994.1
CDS CCA 72 bp CTGCAGGTGCGGGTGGGGACGACTGCCGAGGAATCCTaGCGCTGCTTTCTTCCAAATGTCCAGTCCCCCACG +
Preference number: 6 (lower is better)
Translates to: LQVRVGTTAEES*RCFLPNVQSPT
Trigger: CGTGGGGGACTGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590994.1
CDS CCA 72 bp GGAGACAAGTCACAGGAGACGGGCACTCACCTTCCCTaGAGGCAGCCCCAGCTTGTGGCTCAGCGCTATGAA +
Preference number: 6 (lower is better)
Translates to: GDKSQETGTHLP*RQPQLVAQRYE
Trigger: TTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGGAAGGTGAGTGCCCGTCTCCTGTGACTTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430749.2
CDS GCA 72 bp CCCAGACACAGCCTGTGGGGACAGTGTGTAAGCATATaGCTGGGGCAGCACACAGGGTGTGGGATCCTCATT +
Preference number: 6 (lower is better)
Translates to: PRHSLWGQCVSI*LGQHTGCGILI
Trigger: AATGAGGATCCCACACCCTGTGTGCTGCCCCAGGCATATGCTTACACACTGTCCCCACAGGCTGTGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592291.5
CDS CCA 72 bp AGCTCTAACTTCCGACGGACCTGTGGACTGTCCTGGTaGCCATACCTAGGAAAACGAGGCCAGAGTCAGCGG +
Preference number: 6 (lower is better)
Translates to: SSNFRRTCGLSW*PYLGKRGQSQR
Trigger: CCGCTGACTCTGGCCTCGTTTTCCTAGGTATGGCCACCAGGACAGTCCACAGGTCCGTCGGAAGTTAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428854.5
CDS GCA 72 bp TGCTTTCTTCCAAATGTCCAGTCCCCCACGATCCCCTaGAGCTCAGGGATTCGCTCCAGTGCCTGTTTCAGT +
Preference number: 6 (lower is better)
Translates to: CFLPNVQSPTIP*SSGIRSSACFS
Trigger: ACTGAAACAGGCACTGGAGCGAATCCCTGAGCTGCAGGGGATCGTGGGGGACTGGACATTTGGAAGAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590994.1
CDS GCA 72 bp AGTAGGTTTCCCCGGATCTTCTTGACAGTCCTACAGTaGAGAGGCAGAAAGAGGAGTTACTATGGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: SRFPRIFLTVLQ*RGRKRSYYGPH
Trigger: GTGAGGCCCATAGTAACTCCTCTTTCTGCCTCTGCACTGTAGGACTGTCAAGAAGATCCGGGGAAACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588570.5
CDS CAA 90 bp ATAGCTTTAAGAAGCAGTTACCAGAGTAGGTTTCCCCGGATCTTCTaGACAGTCCTACAGTGCAGAGGCAGAAAGAGGAGTTACTATGGG +
Preference number: 6 (lower is better)
Translates to: IALRSSYQSRFPRIF*TVLQCRGRKRSYYG
Trigger: CCCATAGTAACTCCTCTTTCTGCCTCTGCACTGTAGGACTGTCAAGAAGATCCGGGGAAACCTACTCTGGTAACTGCTTCTTAAAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588570.5
CDS CCA 72 bp ATGAAAGAGAATCTTGTAGCATATGCTTCTCACCTGTaGACTGTCCTGGTGGCCATACCTAGGAAAACGAGG +
Preference number: 6 (lower is better)
Translates to: MKENLVAYASHL*TVLVAIPRKTR
Trigger: CCTCGTTTTCCTAGGTATGGCCACCAGGACAGTCCACAGGTGAGAAGCATATGCTACAAGATTCTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588570.5
CDS GCA 72 bp AGTCATTTTTCGGATGAAAGAGAATCTTGTAGCATATaGTTCTCACCTGTGGACTGTCCTGGTGGCCATACC +
Preference number: 6 (lower is better)
Translates to: SHFSDERESCSI*FSPVDCPGGHT
Trigger: GGTATGGCCACCAGGACAGTCCACAGGTGAGAAGCATATGCTACAAGATTCTCTTTCATCCGAAAAATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424522.5
ENST00000588570.5