Pregenerated sensors for HAUS4 (Homo sapiens)
Ensembl gene IDs: ENSG00000092036Ensembl transcript IDs: ENST00000206474.11, ENST00000342454.12, ENST00000347758.6, ENST00000490506.5, ENST00000541587.6, ENST00000553420.1, ENST00000553794.5, ENST00000554063.1, ENST00000554349.5, ENST00000554373.5, ENST00000554406.1, ENST00000554446.5, ENST00000554516.5, ENST00000554651.5, ENST00000555040.5, ENST00000555367.5, ENST00000555986.5, ENST00000556421.5, ENST00000556915.5, ENST00000557591.5
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AAAAATAAAGAGAAACCAGGAGAGTGCCTAAATGACTaGAGTGTTTCAAGCGTAAGCATTTCCACACTCCCT | + |
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Preference number: 3 (lower is better) Translates to: KNKEKPGECLND*SVSSVSISTLP Trigger: AGGGAGTGTGGAAATGCTTACGCTTGAAACACTGCAGTCATTTAGGCACTCTCCTGGTTTCTCTTTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000206474.11 ENST00000342454.12 ENST00000347758.6 ENST00000490506.5 ENST00000541587.6 ENST00000555367.5 ENST00000555986.5 |
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| CDS TCA 90 bp | CAAGGATTCCCAAGAGCGACGACGGTCTCCGGCCACTGGCCGGAATaGCTCTCCCAGAGCTCCTCTTCCCCGAAGCTCCGCCCGCCGACC | + |
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Preference number: 5 (lower is better) Translates to: QGFPRATTVSGHWPE*LSQSSSSPKLRPPT Trigger: GGTCGGCGGGCGGAGCTTCGGGGAAGAGGAGCTCTGGGAGAGTCATTCCGGCCAGTGGCCGGAGACCGTCGTCGCTCTTGGGAATCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000347758.6 ENST00000553794.5 ENST00000554373.5 ENST00000554406.1 ENST00000554516.5 ENST00000555986.5 |
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| CDS GCA 90 bp | GGAAAGACCAAGCTGAAAGGCCCGGGAAGGGGAAGGAGCCGAAAGTaGACTAGAGGCCGCGACGAAGGAGGTGGAGGCGGGGCCACACTC | + |
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Preference number: 5 (lower is better) Translates to: GKTKLKGPGRGRSRK*TRGRDEGGGGGATL Trigger: GAGTGTGGCCCCGCCTCCACCTCCTTCGTCGCGGCCTCTAGTGCACTTTCGGCTCCTTCCCCTTCCCGGGCCTTTCAGCTTGGTCTTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555040.5 |
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| CDS CCA 90 bp | ATCAAAATGCAGAACGGGCTCTCCGGCGCCTACTTCCCTTCTGTCTaGGCGGCCAAGGATTCCCAAGAGCGACGACGGTCTCCGGCCACT | + |
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Preference number: 5 (lower is better) Translates to: IKMQNGLSGAYFPSV*AAKDSQERRRSPAT Trigger: AGTGGCCGGAGACCGTCGTCGCTCTTGGGAATCCTTGGCCGCCCAGACAGAAGGGAAGTAGGCGCCGGAGAGCCCGTTCTGCATTTTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000347758.6 ENST00000553794.5 ENST00000554373.5 ENST00000554406.1 ENST00000554516.5 ENST00000555986.5 |
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| CDS GCA 90 bp | GCCTGCTCCTTTGCTAGGGTGAGGCTTAAGCCACTCTCATCCACATaGTGTGAGAGATTCAGGAGAAGCTTGCTGAAGTATGGGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: ACSFARVRLKPLSST*CERFRRSLLKYGFC Trigger: ACAGAACCCATACTTCAGCAAGCTTCTCCTGAATCTCTCACAGCATGTGGATGAGAGTGGCTTAAGCCTCACCCTAGCAAAGGAGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000206474.11 ENST00000342454.12 ENST00000347758.6 ENST00000541587.6 ENST00000553420.1 ENST00000554349.5 ENST00000554373.5 ENST00000554446.5 ENST00000554516.5 ENST00000554651.5 ENST00000555040.5 ENST00000555367.5 ENST00000555986.5 ENST00000556915.5 ENST00000557591.5 |
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| CDS TCA 90 bp | AGCCACTCTCATCCACATGCTGTGAGAGATTCAGGAGAAGCTTGCTaGAGTATGGGTTCTGTAACAGGTCCTCTTTACTCAGGTTACAAG | + |
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Preference number: 5 (lower is better) Translates to: SHSHPHAVRDSGEAC*SMGSVTGPLYSGYK Trigger: CTTGTAACCTGAGTAAAGAGGACCTGTTACAGAACCCATACTTCAGCAAGCTTCTCCTGAATCTCTCACAGCATGTGGATGAGAGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000206474.11 ENST00000342454.12 ENST00000347758.6 ENST00000541587.6 ENST00000553420.1 ENST00000554349.5 ENST00000554373.5 ENST00000554446.5 ENST00000554516.5 ENST00000554651.5 ENST00000555040.5 ENST00000555367.5 ENST00000555986.5 ENST00000556915.5 ENST00000557591.5 |
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| CDS TCA 72 bp | CCAAGAGCGACGACGGTCTCCGGCCACTGGCCGGAATaGCTCTCCCAGAGCTCCTCTTCCCCGAAGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PRATTVSGHWPE*LSQSSSSPKLR Trigger: GCGGAGCTTCGGGGAAGAGGAGCTCTGGGAGAGTCATTCCGGCCAGTGGCCGGAGACCGTCGTCGCTCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000347758.6 ENST00000553794.5 ENST00000554373.5 ENST00000554406.1 ENST00000554516.5 ENST00000555986.5 |
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| CDS GCA 72 bp | AAGCTGAAAGGCCCGGGAAGGGGAAGGAGCCGAAAGTaGACTAGAGGCCGCGACGAAGGAGGTGGAGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: KLKGPGRGRSRK*TRGRDEGGGGG Trigger: CCCGCCTCCACCTCCTTCGTCGCGGCCTCTAGTGCACTTTCGGCTCCTTCCCCTTCCCGGGCCTTTCAGCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000206474.11 ENST00000555040.5 |
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| CDS CCA 72 bp | CAGAACGGGCTCTCCGGCGCCTACTTCCCTTCTGTCTaGGCGGCCAAGGATTCCCAAGAGCGACGACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: QNGLSGAYFPSV*AAKDSQERRRS Trigger: AGACCGTCGTCGCTCTTGGGAATCCTTGGCCGCCCAGACAGAAGGGAAGTAGGCGCCGGAGAGCCCGTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000347758.6 ENST00000553794.5 ENST00000554373.5 ENST00000554406.1 ENST00000554516.5 ENST00000555986.5 |
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| CDS GCA 72 bp | TCTTGGGATTCTAATAGGGCCCGAGATGAATCAAAATaGAGAACGGGCTCTCCGGCGCCTACTTCCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SWDSNRARDESK*RTGSPAPTSLL Trigger: CAGAAGGGAAGTAGGCGCCGGAGAGCCCGTTCTGCATTTTGATTCATCTCGGGCCCTATTAGAATCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000347758.6 ENST00000553794.5 ENST00000554373.5 ENST00000554406.1 ENST00000554516.5 ENST00000555986.5 |
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| CDS GCA 72 bp | CCTAATCGCTACAATCCCTGTAAAGCAACCTTCCAGTaGCCCTATCCTGTATCTAGACCCACAAATCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PNRYNPCKATFQ*PYPVSRPTNPA Trigger: GGCAGGATTTGTGGGTCTAGATACAGGATAGGGGCACTGGAAGGTTGCTTTACAGGGATTGTAGCGATTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556421.5 |
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| CDS TCA 72 bp | TTTCACTGTCAGCATCTGAGCAAAGGGGCAGAGGACTaGCAGGAAAACCCTAATCGCTACAATCCCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: FHCQHLSKGAED*QENPNRYNPCK Trigger: TTTACAGGGATTGTAGCGATTAGGGTTTTCCTGTCAGTCCTCTGCCCCTTTGCTCAGATGCTGACAGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554063.1 ENST00000556421.5 |
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| CDS CAA 90 bp | CTTAAGCCACTCTCATCCACATGCTGTGAGAGATTCAGGAGAAGCTaGCTGAAGTATGGGTTCTGTAACAGGTCCTCTTTACTCAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LKPLSSTCCERFRRS*LKYGFCNRSSLLRL Trigger: TAACCTGAGTAAAGAGGACCTGTTACAGAACCCATACTTCAGCAAGCTTCTCCTGAATCTCTCACAGCATGTGGATGAGAGTGGCTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000206474.11 ENST00000342454.12 ENST00000347758.6 ENST00000541587.6 ENST00000553420.1 ENST00000554349.5 ENST00000554373.5 ENST00000554446.5 ENST00000554516.5 ENST00000554651.5 ENST00000555040.5 ENST00000555367.5 ENST00000555986.5 ENST00000556915.5 ENST00000557591.5 |
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