Pregenerated sensors for HAT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000128708Ensembl transcript IDs: ENST00000392584.2, ENST00000412731.5, ENST00000457761.6, ENST00000460481.1, ENST00000494601.5
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAGTCAAAATCAGCATCTGACTTACACGTGGCCGGGTTTTGTCTaGGTACACATAGTAATTATAGACTGTCATGTAGCCTACGGTCGC | + |
|
Preference number: 1 (lower is better) Translates to: WSQNQHLTYTWPGFV*VHIVIIDCHVAYGR Trigger: GCGACCGTAGGCTACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGTCAGATGCTGATTTTGACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR CCA 90 bp | ATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATaGAGTCAAAATCAGCATCTGACTTACACGTGGCCGGGTTTTGTC | + |
|
Preference number: 1 (lower is better) Translates to: MNCFKKLSTMALTLK*SQNQHLTYTWPGFV Trigger: GACAAAACCCGGCCACGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGTCACTGTATTACAGGCGCCCACCACCAAGCCTAGCTAATGTTTGTATTCATCTGACTTACACGTaGCCGGGTTTTGTCTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: PKSLYYRRPPPSLANVCIHLTYT*PGFVWV Trigger: TACCCAGACAAAACCCGGCCACGTGTAAGTCAGATG...AATACAAACATTAGCTAGGCTTGGTGGTGGGCGCCTGTAATACAGTGACTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| 3UTR CAA 90 bp | GTATCTATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTaGAAATGGAGTCAAAATCAGCATCTGACTTACACGTGGCCGGGT | + |
|
Preference number: 2 (lower is better) Translates to: VSMNCFKKLSTMALT*KWSQNQHLTYTWPG Trigger: ACCCGGCCACGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCATAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR-3UTR CCA 90 bp | GAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAACATCTGACTTACACGTaGCCGGGTTTTGTCTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ELFQEVEHHGLDLEMESKHLTYT*PGFVWV Trigger: TACCCAGACAAAACCCGGCCACGTGTAAGTCAGATG...TTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGTCACTGTATTACAGGCGCCCACCACCAAGCCTAGCTAATGTTTGTATTGCCTTGACCTTGAAATaGAGTCAAAATCAGCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: PKSLYYRRPPPSLANVCIALTLK*SQNQHL Trigger: CAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGC...AATACAAACATTAGCTAGGCTTGGTGGTGGGCGCCTGTAATACAGTGACTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| 3UTR CAA 90 bp | AGTGTAGTATCTATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTaGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SVVSMNCFKKLSTMA*TLKWSQNQHLTYTW Trigger: CCACGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCATAGATACTACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR-3UTR TCA 90 bp | TATCCAGTCTGTAGCTTCTGTATTGTTCGGCATCACTCATGTCAGTTACCAGTAAACACGGAACATTGTTaGCAGGCTACCAGCAATATA | + |
|
Preference number: 2 (lower is better) Translates to: YPVCSFCIVRHHSCQLPVNTEHC*QATSNI Trigger: TATATTGCTGGTAGCCTGTCAACAATGTTCCGTGTT...TACTGGTAACTGACATGAGTGATGCCGAACAATACAGAAGCTACAGACTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACCTCATCAACTTTAGATaGATATTCAACACGGAACAT | + |
|
Preference number: 2 (lower is better) Translates to: EHHGLDLEMESKSASDLHLINFR*IFNTEH Trigger: ATGTTCCGTGTTGAATATGCATCTAAAGTTGATGAG...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| 3UTR CAA 90 bp | AGAAAGGAAATCATTCGTGTTTGTGCAAAATCCAGGTGGAATGATTaGTCTAATTTTGCCCTCAACATCATCTGCCTCTACACAGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: RKEIIRVCAKSRWND*SNFALNIICLYTVK Trigger: TTTGACTGTGTAGAGGCAGATGATGTTGAGGGCAAAATTAGACAAATCATTCCACCTGGATTTTGCACAAACACGAATGATTTCCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| 3UTR CCA 72 bp | TTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATaGAGTCAAAATCAGCATCTGACTTACACGTGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: FKKLSTMALTLK*SQNQHLTYTWP Trigger: CGGCCACGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR CCA 72 bp | AATCAGCATCTGACTTACACGTGGCCGGGTTTTGTCTaGGTACACATAGTAATTATAGACTGTCATGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NQHLTYTWPGFV*VHIVIIDCHVA Trigger: GGCTACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGTCAGATGCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAACAACACGGAACATTGTaGACAGGCTACCAGCAATAT | + |
|
Preference number: 3 (lower is better) Translates to: MNCFKKLSTMALTLKWSQQHGTL*TGYQQY Trigger: ATATTGCTGGTAGCCTGTCAACAATGTTCCGTGTTG...TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAAATTCAACACGGAACATaGTTGACAGGCTACCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ELFQEVEHHGLDLEMESKIQHGT*LTGYQQ Trigger: TTGCTGGTAGCCTGTCAACAATGTTCCGTGTTGAAT...TTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| 3UTR-3UTR CAA 90 bp | AAATCAGCATCTGACTTACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATTCCAGGTGGAATGATTaGTCTAATTTTGCCCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KSASDLHVAGFCLGTHSNSRWND*SNFALN Trigger: GTTGAGGGCAAAATTAGACAAATCATTCCACCTGGA...ATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGTCAGATGCTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| 3UTR-3UTR CAA 90 bp | TATCCAGTCTGTAGCTTCTGTATTGTTCGGCATCACTCATGTCAGTTACCAGTAGGAAATCATTCGTGTTaGTGCAAAATCCAGGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YPVCSFCIVRHHSCQLPVGNHSC*CKIQVE Trigger: TTCCACCTGGATTTTGCACAAACACGAATGATTTCC...TACTGGTAACTGACATGAGTGATGCCGAACAATACAGAAGCTACAGACTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAAATGATTTGTCTAATTTaGCCCTCAACATCATCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ELFQEVEHHGLDLEMESKMICLI*PSTSSA Trigger: GGCAGATGATGTTGAGGGCAAAATTAGACAAATCAT...TTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACGTGGCCGGGTTCAAGCGATTCTCCTaGTTCAGCCTCCCAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLDLEMESKSASDLHVAGFKRFS*FSLPSH Trigger: GTGACTTGGGAGGCTGAAGCAGGAGAATCGCTTGAA...CCCGGCCACGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACCTGGTCTTGAACTTCTaGCCTGAGGTGATCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: EHHGLDLEMESKSASDLHLVLNF*PEVIHP Trigger: CGGGTGGATCACCTCAGGTCAGAAGTTCAAGACCAG...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | ATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAACGATCACCCGCGGCTaGGGAAGGACGAATCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: MNCFKKLSTMALTLKWSQTITRG*GRTNQP Trigger: GGGTTGATTCGTCCTTCCTCAGCCGCGGGTGATCGT...TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR CCA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACGCAATGGTGCAATCTTaGCTCACAGCAACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EHHGLDLEMESKSASDLHAMVQS*LTATST Trigger: GGTGGAGGTTGCTGTGAGCCAAGATTGCACCATTGC...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACGTGGCCGGGAGGTTCCGAATGGCTTaGAATCAACTTCCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLDLEMESKSASDLHVAGRFRMA*NQLPFP Trigger: TGGAAAAGGAAGTTGATTTCAAGCCATTCGGAACCT...CCCGGCCACGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | CACATAGTAATTATAGACTGTCATGTAGCCTACGGTCGCAAAGAGCGTAGCTCCTCATCCCCAAAGAGTTaGTGGGTATACTCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HIVIIDCHVAYGRKERSSSSPKS*WVYSGK Trigger: CTTTCCTGAGTATACCCATCAACTCTTTGGGGATGA...GGAGCTACGCTCTTTGCGACCGTAGGCTACATGACAGTCTATAATTACTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | GACTGTCATGTAGCCTACGGTCGCAAAGAGCGTAGCTCCATCCTTATTATACTTCACCACGCCCGGCCATaGGTGAGAATTTTTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DCHVAYGRKERSSILIILHHARP*VRIFIN Trigger: ATTTATAAAAATTCTCACTCATGGCCGGGCGTGGTG...AAGTATAATAAGGATGGAGCTACGCTCTTTGCGACCGTAGGCTACATGACAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACGTGGCCGGGGTTCAATTGCTGTGTTaGTGTTACATTTGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLDLEMESKSASDLHVAGVQLLC*CYICTL Trigger: CAGAGTACAAATGTAACACCAACACAGCAATTGAAC...CCCGGCCACGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CCA 90 bp | GTGCAAAATCCAGGTGGAATGATTTGTCTAATTTTGCCCTCAACATCATCTGCCCATCTGACTTACACGTaGCCGGGTTTTGTCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VQNPGGMICLILPSTSSAHLTYT*PGFVWV Trigger: TACCCAGACAAAACCCGGCCACGTGTAAGTCAGATG...GGCAGATGATGTTGAGGGCAAAATTAGACAAATCATTCCACCTGGATTTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACGTGGCCGGGTCTTCATTGAATCCTTaGATTAATTTTTCCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLDLEMESKSASDLHVAGSSLNP*INFSRE Trigger: TTCCCGGGAAAAATTAATGCAAGGATTCAATGAAGA...CCCGGCCACGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | CAGCATCTGACTTACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATTATAAGGTTCCGAATGGCTTaGAATCAACTTCCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHLTYTWPGFVWVHIVIIRFRMA*NQLPFP Trigger: TGGAAAAGGAAGTTGATTTCAAGCCATTCGGAACCT...TATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGTCAGATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | AAATCAGCATCTGACTTACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATAAACAGGGCAAATCTTaGCAAAGCTTCACAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KSASDLHVAGFCLGTHSNKQGKS*QSFTST Trigger: TGTGCTTGTGAAGCTTTGTCAAGATTTGCCCTGTTT...ATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGTCAGATGCTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CCA 90 bp | AAATCAGCATCTGACTTACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATGCCTTGACCTTGAAATaGAGTCAAAATCAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSASDLHVAGFCLGTHSNALTLK*SQNQHL Trigger: CAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGC...ATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGTCAGATGCTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CCA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACCACATAGCTTTTGGATaGATCTTCCGCTGTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: EHHGLDLEMESKSASDLHHIAFG*IFRCNI Trigger: GATATTACAGCGGAAGATCCATCCAAAAGCTATGTG...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR CAA 72 bp | AACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTaGAAATGGAGTCAAAATCAGCATCTGACTTACACG | + |
|
Preference number: 4 (lower is better) Translates to: NCFKKLSTMALT*KWSQNQHLTYT Trigger: CGTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | GTGCAAAATCCAGGTGGAATGATTTGTCTAATTTTGCCCTCAACATCATCTGCCAACACGGAACATTGTTaGCAGGCTACCAGCAATATA | + |
|
Preference number: 4 (lower is better) Translates to: VQNPGGMICLILPSTSSANTEHC*QATSNI Trigger: TATATTGCTGGTAGCCTGTCAACAATGTTCCGTGTT...GGCAGATGATGTTGAGGGCAAAATTAGACAAATCATTCCACCTGGATTTTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR TCA 90 bp | GAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAAAAACAGGGCAAATCTTaGCAAAGCTTCACAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ELFQEVEHHGLDLEMESKKQGKS*QSFTST Trigger: TGTGCTTGTGAAGCTTTGTCAAGATTTGCCCTGTTT...TTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTC 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CCA 90 bp | GAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAAGCCTTGACCTTGAAATaGAGTCAAAATCAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELFQEVEHHGLDLEMESKALTLK*SQNQHL Trigger: CAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGC...TTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| 3UTR CAA 72 bp | TCTATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTaGACCTTGAAATGGAGTCAAAATCAGCATCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SMNCFKKLSTMA*TLKWSQNQHLT Trigger: AGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGTAAAGAAAGGAAATCATTCGTGTTTGTGCAAAATCCAGGTGGAATGATTCTCCTCCTGTTGGACTaGGAACTGAGTAGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSKERKSFVFVQNPGGMILLLLD*ELSRYE Trigger: TTCATACCTACTCAGTTCTCAGTCCAACAGGAGGAG...AATCATTCCACCTGGATTTTGCACAAACACGAATGATTTCCTTTCTTTACTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR CCA 90 bp | ATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAATGGCCGGGTTTTGTCTaGGTACACATAGTAATTATA | + |
|
Preference number: 4 (lower is better) Translates to: MNCFKKLSTMALTLKWSQWPGFV*VHIVII Trigger: TATAATTACTATGTGTACCCAGACAAAACCCGGCCA...TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CCA 90 bp | TACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATTATAGACTGTCATGTATGGCCGGGTTTTGTCTaGGTACACATAGTAATTATA | + |
|
Preference number: 4 (lower is better) Translates to: YTWPGFVWVHIVIIDCHVWPGFV*VHIVII Trigger: TATAATTACTATGTGTACCCAGACAAAACCCGGCCA...TACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR GCA 90 bp | ATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAACAGTTTCTTCTCCACTaGACTCTTATATTCTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: MNCFKKLSTMALTLKWSQQFLLH*TLIFYQ Trigger: TTGGTAGAATATAAGAGTGCAGTGGAGAAGAAACTG...TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAAGCCTTTCATGATATTCTCGAAAGCCTCTACATGTCATGTCAGCCTTTCTTCATTGAATCCTTaGATTAATTTTTCCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLKPFMIFSKASTCHVSLSSLNP*INFSRE Trigger: TTCCCGGGAAAAATTAATGCAAGGATTCAATGAAGA...AAGGCTGACATGACATGTAGAGGCTTTCGAGAATATCATGAAAGGCTTCAGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR GCA 90 bp | GTGCAAAATCCAGGTGGAATGATTTGTCTAATTTTGCCCTCAACATCATCTGCCCTCATCAACTTTAGATaGATATTCAACACGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VQNPGGMICLILPSTSSALINFR*IFNTEH Trigger: ATGTTCCGTGTTGAATATGCATCTAAAGTTGATGAG...GGCAGATGATGTTGAGGGCAAAATTAGACAAATCATTCCACCTGGATTTTGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCTTCACAAGCACAAAGTCTCGTAATTTCACATAGCTTTTGGATGGATCACATAGCTTTTGGATaGATCTTCCGCTGTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: DKASQAQSLVISHSFWMDHIAFG*IFRCNI Trigger: GATATTACAGCGGAAGATCCATCCAAAAGCTATGTG...ATCCATCCAAAAGCTATGTGAAATTACGAGACTTTGTGCTTGTGAAGCTTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR GCA 90 bp | GACAAAGCTTCACAAGCACAAAGTCTCGTAATTTCACATAGCTTTTGGATGGATCAGTTTCTTCTCCACTaGACTCTTATATTCTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: DKASQAQSLVISHSFWMDQFLLH*TLIFYQ Trigger: TTGGTAGAATATAAGAGTGCAGTGGAGAAGAAACTG...ATCCATCCAAAAGCTATGTGAAATTACGAGACTTTGTGCTTGTGAAGCTTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CCA 90 bp | ACACAGTCAAAGTTCTCATCAACTTTAGATGCATATTCAACACGGAACATTGTTGTTCAATTGCTGTGTTaGTGTTACATTTGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQSKFSSTLDAYSTRNIVVQLLC*CYICTL Trigger: CAGAGTACAAATGTAACACCAACACAGCAATTGAAC...AACAATGTTCCGTGTTGAATATGCATCTAAAGTTGATGAGAACTTTGACTGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR GCA 90 bp | ACACAGTCAAAGTTCTCATCAACTTTAGATGCATATTCAACACGGAACATTGTTTTAGCAAGATCTCTCTaGTTTTTCTTATATGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TQSKFSSTLDAYSTRNIVLARSL*FFLYGL Trigger: TAGCCCATATAAGAAAAAGCAGAGAGATCTTGCTAA...AACAATGTTCCGTGTTGAATATGCATCTAAAGTTGATGAGAACTTTGACTGTGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS GCA 90 bp | CCAAGCAGTTGGGGGCGGGGGCGCGGACCGCCGCCAACAAGGAGCTaGTGGGCTGAGAGTTCCGCGCTTCCGGTCCCAAGCAGGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSWGRGRGPPPTRS*WAESSALPVPSRPS Trigger: AGAAGGCCTGCTTGGGACCGGAAGCGCGGAACTCTCAGCCCAGCAGCTCCTTGTTGGCGGCGGTCCGCGCCCCCGCCCCCAACTGCTTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS TCA 90 bp | AGCATTAAAATCAGCTGGCGGGAACAGGACCAGATGTACAAGAGCTaGAGCAAGCAGCAGTGGACAAAAGGAATGGGAAGAGAAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SIKISWREQDQMYKS*SKQQWTKGMGRETG Trigger: GCCTGTTTCTCTTCCCATTCCTTTTGTCCACTGCTGCTTGCTTCAGCTCTTGTACATCTGGTCCTGTTCCCGCCAGCTGATTTTAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS-3UTR CAA 90 bp | CACATAGTAATTATAGACTGTCATGTAGCCTACGGTCGCAAAGAGCGTAGCTCCAACTGTTTCAAGAAGTaGAGCACCATGGCCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: HIVIIDCHVAYGRKERSSNCFKK*STMALT Trigger: GGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTT...GGAGCTACGCTCTTTGCGACCGTAGGCTACATGACAGTCTATAATTACTATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACCAACACGGAACATTGTaGACAGGCTACCAGCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: EHHGLDLEMESKSASDLHQHGTL*TGYQQY Trigger: ATATTGCTGGTAGCCTGTCAACAATGTTCCGTGTTG...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR CAA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACACCATGGCCTTGACCTaGAAATGGAGTCAAAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: EHHGLDLEMESKSASDLHTMALT*KWSQNQ Trigger: CTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGT...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACTCTGTAGCTTCTGTATaGTTCGGCATCACTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: EHHGLDLEMESKSASDLHSVASV*FGITHV Trigger: GACATGAGTGATGCCGAACAATACAGAAGCTACAGA...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | CACATAGTAATTATAGACTGTCATGTAGCCTACGGTCGCAAAGAGCGTAGCTCCTCTGTAGCTTCTGTATaGTTCGGCATCACTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: HIVIIDCHVAYGRKERSSSVASV*FGITHV Trigger: GACATGAGTGATGCCGAACAATACAGAAGCTACAGA...GGAGCTACGCTCTTTGCGACCGTAGGCTACATGACAGTCTATAATTACTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | GAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACCTCATCCCCAAAGAGTaGATGGGTATACTCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EVEHHGLDLEMESKSASDLIPKE*MGILRK Trigger: TTTCCTGAGTATACCCATCAACTCTTTGGGGATGAG...GTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACGGAAATCATTCGTGTTaGTGCAAAATCCAGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EHHGLDLEMESKSASDLHGNHSC*CKIQVE Trigger: TTCCACCTGGATTTTGCACAAACACGAATGATTTCC...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | CACATAGTAATTATAGACTGTCATGTAGCCTACGGTCGCAAAGAGCGTAGCTCCGGAAATCATTCGTGTTaGTGCAAAATCCAGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HIVIIDCHVAYGRKERSSGNHSC*CKIQVE Trigger: TTCCACCTGGATTTTGCACAAACACGAATGATTTCC...GGAGCTACGCTCTTTGCGACCGTAGGCTACATGACAGTCTATAATTACTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | TACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATTATAGACTGTCATGTATTGAGCACCATGGCCTaGACCTTGAAATGGAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YTWPGFVWVHIVIIDCHVLSTMA*TLKWSQ Trigger: TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAA...TACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | TACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATTATAGACTGTCATGTAAACTGTTTCAAGAAGTaGAGCACCATGGCCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: YTWPGFVWVHIVIIDCHVNCFKK*STMALT Trigger: GGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTT...TACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACAAAACAGGGCAAATCTaGACAAAGCTTCACAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EHHGLDLEMESKSASDLHKTGQI*TKLHKH Trigger: GTGCTTGTGAAGCTTTGTCAAGATTTGCCCTGTTTT...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS TCA 90 bp | CTTTCTCAAAGGGCATCTAAATACGATCCTCGGAATACTAAAGTGTaGCAGATTAACGAGACGACTACGAAGTCAGTCGAGATCCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSQRASKYDPRNTKV*QINETTTKSVEIQV Trigger: CACTTGGATCTCGACTGACTTCGTAGTCGTCTCGTTAATCTGTCACACTTTAGTATTCCGAGGATCGTATTTAGATGCCCTTTGAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460481.1 ENST00000494601.5 |
||
| CDS-3UTR CAA 90 bp | TATCCAGTCTGTAGCTTCTGTATTGTTCGGCATCACTCATGTCAGTTACCAGTAATTCAACACGGAACATaGTTGACAGGCTACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YPVCSFCIVRHHSCQLPVIQHGT*LTGYQQ Trigger: TTGCTGGTAGCCTGTCAACAATGTTCCGTGTTGAAT...TACTGGTAACTGACATGAGTGATGCCGAACAATACAGAAGCTACAGACTGGATA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR CAA 90 bp | TACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATTATAGACTGTCATGTAACCATGGCCTTGACCTaGAAATGGAGTCAAAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: YTWPGFVWVHIVIIDCHVTMALT*KWSQNQ Trigger: CTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGT...TACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | GAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACTTACACAGTTCAATTGCTGTGTaGGTGTTACATTTGTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: EHHGLDLEMESKSASDLHSSIAV*VLHLYS Trigger: AGAGTACAAATGTAACACCAACACAGCAATTGAACT...GTGTAAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | CAGCATCTGACTTACACGTGGCCGGGTTTTGTCTGGGTACACATAGTAATTATAATGATTTGTCTAATTTaGCCCTCAACATCATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QHLTYTWPGFVWVHIVIIMICLI*PSTSSA Trigger: GGCAGATGATGTTGAGGGCAAAATTAGACAAATCAT...TATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGTCAGATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR CAA 90 bp | TATCCAGTCTGTAGCTTCTGTATTGTTCGGCATCACTCATGTCAGTTACCAGTATCCAGGTGGAATGATTaGTCTAATTTTGCCCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: YPVCSFCIVRHHSCQLPVSRWND*SNFALN Trigger: GTTGAGGGCAAAATTAGACAAATCATTCCACCTGGA...TACTGGTAACTGACATGAGTGATGCCGAACAATACAGAAGCTACAGACTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | ATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAATCCAGGTGGAATGATTaGTCTAATTTTGCCCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: MNCFKKLSTMALTLKWSQSRWND*SNFALN Trigger: GTTGAGGGCAAAATTAGACAAATCATTCCACCTGGA...TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | GAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAATCAGCATCTGACCATGCTTATTTCTATTaGGTTCATCTGGTTTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVEHHGLDLEMESKSASDHAYFY*VHLVCQ Trigger: CTGACAAACCAGATGAACCAAATAGAAATAAGCATG...GTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR CAA 90 bp | ATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAAGTTCAATTGCTGTGTaGGTGTTACATTTGTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: MNCFKKLSTMALTLKWSQSSIAV*VLHLYS Trigger: AGAGTACAAATGTAACACCAACACAGCAATTGAACT...TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412731.5 ENST00000457761.6 |
||
| CDS-3UTR CAA 90 bp | ACACAGTCAAAGTTCTCATCAACTTTAGATGCATATTCAACACGGAACATTGTTTTGAGCACCATGGCCTaGACCTTGAAATGGAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TQSKFSSTLDAYSTRNIVLSTMA*TLKWSQ Trigger: TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAA...AACAATGTTCCGTGTTGAATATGCATCTAAAGTTGATGAGAACTTTGACTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS-3UTR CAA 90 bp | ATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATGGAGTCAAATGATTTGTCTAATTTaGCCCTCAACATCATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MNCFKKLSTMALTLKWSQMICLI*PSTSSA Trigger: AGCAGATGATGTTGAGGGCAAAATTAGACAAATCAT...TTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS TCA 90 bp | TCAGGCTTAGAAAGAGGTTTAGTTGAAGGGCATCCAACTACTAAATaGTGGGCCCAAAATTCGAATTTAGATGTAATTCTTAGAGTACGT | + |
|
Preference number: 5 (lower is better) Translates to: SGLERGLVEGHPTTK*WAQNSNLDVILRVR Trigger: ACGTACTCTAAGAATTACATCTAAATTCGAATTTTGGGCCCATCATTTAGTAGTTGGATGCCCTTCAACTAAACCTCTTTCTAAGCCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS-3UTR CAA 90 bp | ACACAGTCAAAGTTCTCATCAACTTTAGATGCATATTCAACACGGAACATTGTTAAAACAGGGCAAATCTaGACAAAGCTTCACAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQSKFSSTLDAYSTRNIVKTGQI*TKLHKH Trigger: GTGCTTGTGAAGCTTTGTCAAGATTTGCCCTGTTTT...AACAATGTTCCGTGTTGAATATGCATCTAAAGTTGATGAGAACTTTGACTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS GCA 90 bp | AAATATCATTATACTGTCCCAATAATTGGGCTGCCACAATTAAAATaGTGGCTTTGTGGAGGTAATAAGGTCTACTGTTGCTTTAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: KYHYTVPIIGLPQLK*WLCGGNKVYCCFRT Trigger: AGTTCTAAAGCAACAGTAGACCTTATTACCTCCACAAAGCCAGCATTTTAATTGTGGCAGCCCAATTATTGGGACAGTATAATGATATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS GCA 72 bp | TGGGGGCGGGGGCGCGGACCGCCGCCAACAAGGAGCTaGTGGGCTGAGAGTTCCGCGCTTCCGGTCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: WGRGRGPPPTRS*WAESSALPVPS Trigger: GCTTGGGACCGGAAGCGCGGAACTCTCAGCCCAGCAGCTCCTTGTTGGCGGCGGTCCGCGCCCCCGCCCCCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS CCA 72 bp | GGGCGGGGGCGCGGACCGCCGCCAACAAGGAGCTGCTaGGCTGAGAGTTCCGCGCTTCCGGTCCCAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGRGPPPTRSC*AESSALPVPSR Trigger: CCTGCTTGGGACCGGAAGCGCGGAACTCTCAGCCCAGCAGCTCCTTGTTGGCGGCGGTCCGCGCCCCCGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS CAA 90 bp | GGGAGCGCCAGAGCAGGGCAAGGCAGCAATGCGCTAGCTCAGAAGTaGACTGTAGTGGAAGGTAGACGGAGACCCGCCATTTCCGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GSARAGQGSNALAQK*TVVEGRRRPAISEL Trigger: TAGCTCGGAAATGGCGGGTCTCCGTCTACCTTCCACTACAGTCAACTTCTGAGCTAGCGCATTGCTGCCTTGCCCTGCTCTGGCGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460481.1 |
||
| CDS CAA 90 bp | GGGAGCGCCAGAGCAGGGCAAGGCAGCAATGCGCTAGCTCAGAAGTaGACTGTAGTGGAAGGTAGACGGAGACCTGGAAGAGGAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSARAGQGSNALAQK*TVVEGRRRPGRGGG Trigger: TCCTCCTCCTCTTCCAGGTCTCCGTCTACCTTCCACTACAGTCAACTTCTGAGCTAGCGCATTGCTGCCTTGCCCTGCTCTGGCGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS CAA 90 bp | TGGCGCGTGACTGTAGTCCTAGCTACTCCGGAGGCTGAGGCAGAATaGCTTGAATCCAGAAGGCAAAGGTTGCCGAGATCGCGCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: WRVTVVLATPEAEAE*LESRRQRLPRSRHC Trigger: GCAGTGGCGCGATCTCGGCAACCTTTGCCTTCTGGATTCAAGCAATTCTGCCTCAGCCTCCGGAGTAGCTAGGACTACAGTCACGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS CAA 72 bp | ACTGTAGTCCTAGCTACTCCGGAGGCTGAGGCAGAATaGCTTGAATCCAGAAGGCAAAGGTTGCCGAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: TVVLATPEAEAE*LESRRQRLPRS Trigger: CGATCTCGGCAACCTTTGCCTTCTGGATTCAAGCAATTCTGCCTCAGCCTCCGGAGTAGCTAGGACTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS CCA 72 bp | TTTTCAGTGTCAGCAAGCTACTCTGTGAGGGCCCAATaGGTACACCTGCTATGTTCTGAATGTACAATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FSVSASYSVRAQ*VHLLCSECTIH Trigger: GTGAATTGTACATTCAGAACATAGCAGGTGTACCCATTGGGCCCTCACAGAGTAGCTTGCTGACACTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS TCA 72 bp | TTCCATTATGCAGAAACAGCTGACTATACCCCTTCATaGCAGTCTGAACTGGCCAAGGCAAAAGGTTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FHYAETADYTPS*QSELAKAKGCL Trigger: TAAGCAACCTTTTGCCTTGGCCAGTTCAGACTGTCATGAAGGGGTATAGTCAGCTGTTTCTGCATAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS TCA 72 bp | AGGGCATCTAAATACGATCCTCGGAATACTAAAGTGTaGCAGATTAACGAGACGACTACGAAGTCAGTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RASKYDPRNTKV*QINETTTKSVE Trigger: CTCGACTGACTTCGTAGTCGTCTCGTTAATCTGTCACACTTTAGTATTCCGAGGATCGTATTTAGATGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460481.1 ENST00000494601.5 |
||
| CDS CCA 72 bp | TACTGCCAATTACCTTACACGTGGCCGGGTTTTGTCTaGGTACACATAGTAATTATAGACTGTCATGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: YCQLPYTWPGFV*VHIVIIDCHVA Trigger: GGCTACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGGTAATTGGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS CCA 72 bp | ACAAGGCACGTGTTATACTGCCAATTACCTTACACGTaGCCGGGTTTTGTCTGGGTACACATAGTAATTATA | + |
|
Preference number: 6 (lower is better) Translates to: TRHVLYCQLPYT*PGFVWVHIVII Trigger: TATAATTACTATGTGTACCCAGACAAAACCCGGCCACGTGTAAGGTAATTGGCAGTATAACACGTGCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS TCA 72 bp | TTTGCCCTCAACATCATCTGCTCATCCCCAAAGAGTTaGTGGGTATACTCAGGAAAGAAAGTTCTAATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FALNIICSSPKS*WVYSGKKVLMS Trigger: TGACATTAGAACTTTCTTTCCTGAGTATACCCATCAACTCTTTGGGGATGAGCAGATGATGTTGAGGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS TCA 72 bp | GAGAATTCCTGGATTCTGACTATTTCACACACTTACTaGGCTAGTAAGCTCAGGGAACTAGAGCACATTACT | + |
|
Preference number: 6 (lower is better) Translates to: ENSWILTISHTY*ASKLRELEHIT Trigger: AGTAATGTGCTCTAGTTCCCTGAGCTTACTAGCTCAGTAAGTGTGTGAAATAGTCAGAATCCAGGAATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS CAA 72 bp | AACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTaGAAATGGAGTCAAAATCAGCATCTGACTACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: NCFKKLSTMALT*KWSQNQHLTTV Trigger: TACTGTAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS CAA 90 bp | AGTGTAGTATCTATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTaGACCTTGAAATGGAGTCAAAATCAGCATCTGACTACAGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVVSMNCFKKLSTMA*TLKWSQNQHLTTVK Trigger: CTTTACTGTAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCATAGATACTACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS CCA 72 bp | TTCAAGAAGTTGAGCACCATGGCCTTGACCTTGAAATaGAGTCAAAATCAGCATCTGACTACAGTAAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: FKKLSTMALTLK*SQNQHLTTVKK Trigger: TTTCTTTACTGTAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS CAA 72 bp | TTTGTGCAAAATCCAGGTGGAATGATTTGTCTAATTTaGCCCTCAACATCATCTGCTCATCCCCAAAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FVQNPGGMICLI*PSTSSAHPQRV Trigger: AACTCTTTGGGGATGAGCAGATGATGTTGAGGGCAAAATTAGACAAATCATTCCACCTGGATTTTGCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457761.6 |
||
| CDS CAA 90 bp | CTTGTAACCAAAAGCAGTTTCACTAATTTTAGTTCAATTGCTGTGTaGGTGTTACATTTGTACTCTGCCAGTTTCTTCTCCACTGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LVTKSSFTNFSSIAV*VLHLYSASFFSTAL Trigger: GAGTGCAGTGGAGAAGAAACTGGCAGAGTACAAATGTAACACCAACACAGCAATTGAACTAAAATTAGTGAAACTGCTTTTGGTTACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412731.5 |
||
| CDS CAA 90 bp | GTATCTATGAACTGTTTCAAGAAGTTGAGCACCATGGCCTTGACCTaGAAATGGAGTCAAAATCAGCATCTGACTACAGTAAAGAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: VSMNCFKKLSTMALT*KWSQNQHLTTVKKL Trigger: TAATTTCTTTACTGTAGTCAGATGCTGATTTTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTTGAAACAGTTCATAGATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392584.2 |
||
| CDS TCA 72 bp | GAAAGACTTGAAGCAGTACAGATTAATAGTCTGGAGTaGGAATTCCTGGATTCTGACTATTTCACACACTTA | + |
|
Preference number: 6 (lower is better) Translates to: ERLEAVQINSLE*EFLDSDYFTHL Trigger: TAAGTGTGTGAAATAGTCAGAATCCAGGAATTCTCACTCCAGACTATTAATCTGTACTGCTTCAAGTCTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||
| CDS TCA 72 bp | GAAAGAGGTTTAGTTGAAGGGCATCCAACTACTAAATaGTGGGCCCAAAATTCGAATTTAGATGTAATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ERGLVEGHPTTK*WAQNSNLDVIL Trigger: AAGAATTACATCTAAATTCGAATTTTGGGCCCATCATTTAGTAGTTGGATGCCCTTCAACTAAACCTCTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494601.5 |
||