RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000103044

Ensembl transcript IDs: ENST00000219322.7, ENST00000306560.1, ENST00000566118.5, ENST00000568321.1, ENST00000569188.6

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGTGCCCTCTGGAGCCCAGGAGGAGGCTACTGCCTATGTGCAGATaGAAGCAGACAGGCAGTCTGAAAACACAGAATCCCCTGCAGCCC +
Preference number: 1 (lower is better)
Translates to: ECPLEPRRRLLPMCR*KQTGSLKTQNPLQP
Trigger: GGGCTGCAGGGGATTCTGTGTTTTCAGACTGCCTGTCTGCTTGCATCTGCACATAGGCAGTAGCCTCCTCCTGGGCTCCAGAGGGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp GCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATaGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTAC +
Preference number: 1 (lower is better)
Translates to: ARSVEILLPPLVVFR*AGRTSFRRLPSLRY
Trigger: GTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR TCA 90 bp CTCCTCATAGTTCCCATATGTGCTGAGAACACGCTTGCCTCCTGCTaGAGCTTCTATAAGAGCCGGGGCTCCGCCCCAATTGCCACCTTG +
Preference number: 1 (lower is better)
Translates to: LLIVPICAENTLASC*SFYKSRGSAPIATL
Trigger: CAAGGTGGCAATTGGGGCGGAGCCCCGGCTCTTATAGAAGCTTCAGCAGGAGGCAAGCGTGTTCTCAGCACATATGGGAACTATGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR GCA 90 bp CTCTGGTTGTGTTCAGATGGGCTGGGAGAACCTCCTTCCGCAGGTTaGCGTCACTCAGGTACCTATCACAAGTTGCCACTGAATGGGACT +
Preference number: 1 (lower is better)
Translates to: LWLCSDGLGEPPSAG*RHSGTYHKLPLNGT
Trigger: AGTCCCATTCAGTGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACACAACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp CTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTaGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATC +
Preference number: 1 (lower is better)
Translates to: LSRNSPATSGCVQMG*ENLLPQVAVTQVPI
Trigger: GATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp CCATCTGTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTaGTACACTAGAGGCTTGCCCTCTTGTCTGCTGTCCACCTTAGTG +
Preference number: 1 (lower is better)
Translates to: PSVAQSTPCVFVGST*YTRGLPSCLLSTLV
Trigger: CACTAAGGTGGACAGCAGACAAGAGGGCAAGCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCACAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp CTGAGCAGTTTCCAGGTGGAACACCCAAGGCCTCTGTGTAGCTTATaGCCTCCTTTAGCACCACCACAATCTCTTTGTTCCTCCTGGCAA +
Preference number: 1 (lower is better)
Translates to: LSSFQVEHPRPLCSL*PPLAPPQSLCSSWQ
Trigger: TTGCCAGGAGGAACAAAGAGATTGTGGTGGTGCTAAAGGAGGCCATAAGCTACACAGAGGCCTTGGGTGTTCCACCTGGAAACTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR TCA 90 bp GAGTGGGGTATCTCACATAAAGCACCATTCCTGGACCCTGTTTTCTaGTGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAA +
Preference number: 1 (lower is better)
Translates to: EWGISHKAPFLDPVF*CPKIRLLGLVSQAQ
Trigger: TTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAACAGGGTCCAGGAATGGTGCTTTATGTGAGATACCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR TCA 90 bp TCCCCAGCAGAGATCACAGACAAGCTAAGAACCCATCTAGACGTCTaGGCAGTTTCCAGGTGGAACACCCAAGGCCTCTGTGTAGCTTAT +
Preference number: 1 (lower is better)
Translates to: SPAEITDKLRTHLDV*AVSRWNTQGLCVAY
Trigger: ATAAGCTACACAGAGGCCTTGGGTGTTCCACCTGGAAACTGCTCAGACGTCTAGATGGGTTCTTAGCTTGTCTGTGATCTCTGCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp TCACTCAGGTACCTATCACAAGTTGCCACTGAATGGGACTTAACTTaGTTTAGCACAACTTCTGAGTGCCCTCTGGAGCCCAGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: SLRYLSQVATEWDLT*FSTTSECPLEPRRR
Trigger: CCTCCTCCTGGGCTCCAGAGGGCACTCAGAAGTTGTGCTAAACCAAGTTAAGTCCCATTCAGTGGCAACTTGTGATAGGTACCTGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp CGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCACTGAATaGGACTTAACTTGGTTTAGCACAACTTCTGAGTGCCCTCTGGAG +
Preference number: 1 (lower is better)
Translates to: RRLPSLRYLSQVATE*DLTWFSTTSECPLE
Trigger: CTCCAGAGGGCACTCAGAAGTTGTGCTAAACCAAGTTAAGTCCCATTCAGTGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp GGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACCATTCCTaGACCCTGTTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTG +
Preference number: 1 (lower is better)
Translates to: GMLMWSGVSHIKHHS*TLFSDAQRSGFWAL
Trigger: CAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAACAGGGTCCAGGAATGGTGCTTTATGTGAGATACCCCACTCCACATCAACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp AGTGCTAACTCCCTGCTGGTTTGGCTCATCCCTGGAATGTTGATGTaGAGTGGGGTATCTCACATAAAGCACCATTCCTGGACCCTGTTT +
Preference number: 1 (lower is better)
Translates to: SANSLLVWLIPGMLM*SGVSHIKHHSWTLF
Trigger: AAACAGGGTCCAGGAATGGTGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACCAGCAGGGAGTTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp CACCATTCCTGGACCCTGTTTTCTGATGCCCAAAGATCAGGCTTCTaGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACT +
Preference number: 1 (lower is better)
Translates to: HHSWTLFSDAQRSGF*ALYLRRNLIALMTT
Trigger: AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAACAGGGTCCAGGAATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 90 bp CAGGCCATACTACATCACCGTTCTTTGCATTTTAGATTTGTCCTTTaGACCATTAAGAGACTAAAACACAGCACTCCCTCCTCCCTCCCA +
Preference number: 1 (lower is better)
Translates to: QAILHHRSLHFRFVL*TIKRLKHSTPSSLP
Trigger: TGGGAGGGAGGAGGGAGTGCTGTGTTTTAGTCTCTTAATGGTCCAAAGGACAAATCTAAAATGCAAAGAACGGTGATGTAGTATGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCCCAGGAGGAGGCTACTaGCTATGTGCAGATGCAAGC +
Preference number: 2 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLPGGGY*LCADAS
Trigger: GCTTGCATCTGCACATAGGCAGTAGCCTCCTCCTGG...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAAGCACAACTTCTGAGTaGCCTCTGGAGCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQSTTSE*PLEPRR
Trigger: CCTCCTGGGCTCCAGAGGGCACTCAGAAGTTGTGCT...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCGGGCTCCGCCCCAATTaGCACCTTGAAAACCTTACC +
Preference number: 2 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLGLRPN*HLENLT
Trigger: GGTAAGGTTTTCAAGGTGGCAATTGGGGCGGAGCCC...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAAATCCCCTGCAGCCCTaGATCTGGGGGATCAGTGTT +
Preference number: 2 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQNPLQP*IWGISV
Trigger: AACACTGATCCCCCAGATGCAGGGCTGCAGGGGATT...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCCTGCCTATGTGCAGATaGAAGCAGACAGGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLLPMCR*KQTGSL
Trigger: CAGACTGCCTGTCTGCTTGCATCTGCACATAGGCAG...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGTGTGTTCAGATGGGCTaGGAGAACCTCCTTCCGCAG +
Preference number: 2 (lower is better)
Translates to: LALLSAVHLSAGSARVSWCVQMG*ENLLPQ
Trigger: CTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACACA...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CAA 90 bp CCTCTGGTTGTGTTCAGATGGGCTGGGAGAACCTCCTTCCGCAGGTaGCCGTCACTCAGGTACCTATCACAAGTTGCCACTGAATGGGAC +
Preference number: 2 (lower is better)
Translates to: PLVVFRWAGRTSFRR*PSLRYLSQVATEWD
Trigger: GTCCCATTCAGTGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACACAACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGAAATCCCCTGCAGCCCTaGATCTGGGGGATCAGTGTT +
Preference number: 2 (lower is better)
Translates to: TGPARSVEILLPPLVVFRNPLQP*IWGISV
Trigger: AACACTGATCCCCCAGATGCAGGGCTGCAGGGGATT...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTGTTAGCTGGCCCCTCTaGGAAAGGACATTTGGAGGG +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSVSWPL*ERTFGG
Trigger: CCCTCCAAATGTCCTTTCTCAGAGGGGCCAGCTAAC...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAAGGCTACTGCCTATGTaGAGATGCAAGCAGACAGGC +
Preference number: 2 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPRLLPM*RCKQTG
Trigger: GCCTGTCTGCTTGCATCTGCACATAGGCAGTAGCCT...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTCCTCCTTCCGCAGGTTaGCGTCACTCAGGTACCTAT +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSPPSAG*RHSGTY
Trigger: ATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGG...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCTGCAGCCCTGCATCTaGGGGATCAGTGTTGCCTCC +
Preference number: 2 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHLQPCI*GISVAS
Trigger: GGAGGCAACACTGATCCCCCAGATGCAGGGCTGCAG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTACCCATCTAGACGTCTaGGCAGTTTCCAGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSTHLDV*AVSRWN
Trigger: GTTCCACCTGGAAACTGCTCAGACGTCTAGATGGGT...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTCCCTCCCTTACCCATTaGACTTTACCCGCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSPSLTH*TLPALL
Trigger: AAGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGG...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCCAAAGATCAGGCTTCTaGGCCTTGTATCTCAGGCGC +
Preference number: 2 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGQRSGF*ALYLRR
Trigger: GCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTG...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTCAAAGATCAGGCTTCTaGGCCTTGTATCTCAGGCGC +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSQRSGF*ALYLRR
Trigger: GCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTG...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTTCATCCCTGGAATGTTaGTGTGGAGTGGGGTATCTC +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSSSLEC*CGVGYL
Trigger: GAGATACCCCACTCCACATCAACATTCCAGGGATGA...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGACCAGGAGGAGGCTACTaGCTATGTGCAGATGCAAGC +
Preference number: 2 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRPGGGY*LCADAS
Trigger: GCTTGCATCTGCACATAGGCAGTAGCCTCCTCCTGG...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGACCTCCTTCCGCAGGTTaGCGTCACTCAGGTACCTAT +
Preference number: 2 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRPPSAG*RHSGTY
Trigger: ATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGG...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTCTGCAGCCCTGCATCTaGGGGATCAGTGTTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SGFWALYLRRNLIALMTTLQPCI*GISVAS
Trigger: GGAGGCAACACTGATCCCCCAGATGCAGGGCTGCAG...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCTTCTCCTGCCACCTCTaGTTGTGTTCAGATGGGCTG +
Preference number: 2 (lower is better)
Translates to: KNSSLKVTHANPAAKESVFSCHL*LCSDGL
Trigger: CAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAA...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTAACTCCCTGCTGGTTTaGCTCATCCCTGGAATGTTG +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSNSLLV*LIPGML
Trigger: CAACATTCCAGGGATGAGCCAAACCAGCAGGGAGTT...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCCCTCTGTGTAGCTTATaGCCTCCTTTAGCACCACCA +
Preference number: 2 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGPLCSL*PPLAPP
Trigger: TGGTGGTGCTAAAGGAGGCCATAAGCTACACAGAGG...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTCTGAGAAAGGACATTTaGAGGGCAAGCAAGCAACCC +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSLRKDI*RASKQP
Trigger: GGGTTGCTTGCTTGCCCTCCAAATGTCCTTTCTCAG...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CAA 90 bp CAGTTCAGTGCTAACTCCCTGCTGGTTTGGCTCATCCCTGGAATGTaGATGTGGAGTGGGGTATCTCACATAAAGCACCATTCCTGGACC +
Preference number: 2 (lower is better)
Translates to: QFSANSLLVWLIPGM*MWSGVSHIKHHSWT
Trigger: GGTCCAGGAATGGTGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACCAGCAGGGAGTTAGCACTGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGAAACACAGAATCCCCTaGAGCCCTGCATCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVKHRIP*SPASGG
Trigger: TCCCCCAGATGCAGGGCTGCAGGGGATTCTGTGTTT...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGACTGCCTATGTGCAGATaGAAGCAGACAGGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRLPMCR*KQTGSL
Trigger: CAGACTGCCTGTCTGCTTGCATCTGCACATAGGCAG...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAAGCACAACTTCTGAGTaGCCTCTGGAGCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGSTTSE*PLEPRR
Trigger: CCTCCTGGGCTCCAGAGGGCACTCAGAAGTTGTGCT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGATCAGTGCTAACTCCCTaGTGGTTTGGCTCATCCCTG +
Preference number: 2 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRSVLTP*WFGSSL
Trigger: CAGGGATGAGCCAAACCAGCAGGGAGTTAGCACTGA...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGTGTGTTCAGATGGGCTaGGAGAACCTCCTTCCGCAG +
Preference number: 2 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVCVQMG*ENLLPQ
Trigger: CTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACACA...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCTGGTTGTGTTCAGATaGGCTGGGAGAACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHLVVFR*AGRTSF
Trigger: GAAGGAGGTTCTCCCAGCCCATCTGAACACAACCAG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCAATGTTGATGTGGAGTaGGGTATCTCACATAAAGCA +
Preference number: 2 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLNVDVE*GISHKA
Trigger: TGCTTTATGTGAGATACCCCACTCCACATCAACATT...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR TCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACTGGACCCTGTTTTCTaGTGCCCAAAGATCAGGCTT +
Preference number: 2 (lower is better)
Translates to: GLAHPWNVDVEWGISHKALDPVF*CPKIRL
Trigger: AAGCCTGATCTTTGGGCATCAGAAAACAGGGTCCAG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCCCTCCCTTACCCATTaGACTTTACCCGCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFPSLTH*TLPALL
Trigger: AAGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAAGGCTACTGCCTATGTaGAGATGCAAGCAGACAGGC +
Preference number: 2 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGRLLPM*RCKQTG
Trigger: GCCTGTCTGCTTGCATCTGCACATAGGCAGTAGCCT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR TCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACGCTTTCCATTGGAGATaGTTGTCAAGAACAGTAGCC +
Preference number: 2 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHAFHWR*LSRTVA
Trigger: GGCTACTGTTCTTGACAATCATCTCCAATGGAAAGC...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTGAATGGGACTTAACTTaGTTTAGCACAACTTCTGAG +
Preference number: 2 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSEWDLT*FSTTSE
Trigger: CTCAGAAGTTGTGCTAAACCAAGTTAAGTCCCATTC...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGAATAAAGCACCATTCCTaGACCCTGTTTTCTGATGCC +
Preference number: 2 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRIKHHS*TLFSDA
Trigger: GGCATCAGAAAACAGGGTCCAGGAATGGTGCTTTAT...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAGTGCTAACTCCCTGCTaGTTTGGCTCATCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIVLTPC*FGSSLE
Trigger: TTCCAGGGATGAGCCAAACCAGCAGGGAGTTAGCAC...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR TCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGATCACAAGTTGCCACTaGATGGGACTTAACTTGGTT +
Preference number: 2 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVITSCH*MGLNLV
Trigger: AACCAAGTTAAGTCCCATTCAGTGGCAACTTGTGAT...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGAAATGTTGATGTGGAGTaGGGTATCTCACATAAAGCA +
Preference number: 2 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRNVDVE*GISHKA
Trigger: TGCTTTATGTGAGATACCCCACTCCACATCAACATT...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CAA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTaGCATTTTAGATTTGTCCTTTGGACCATTAAGAGACTAAAACAC +
Preference number: 2 (lower is better)
Translates to: ASSKQSCQAILHHRS*HFRFVLWTIKRLKH
Trigger: GTGTTTTAGTCTCTTAATGGTCCAAAGGACAAATCTAAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR TCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAATCACAAGTTGCCACTaGATGGGACTTAACTTGGTT +
Preference number: 2 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIITSCH*MGLNLV
Trigger: AACCAAGTTAAGTCCCATTCAGTGGCAACTTGTGAT...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACAGGCGCAATCTTATTaGATTGATGACTACTTAGGG +
Preference number: 2 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIQAQSY*IDDYLG
Trigger: CCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACAAGTTGCCACTGAATaGGACTTAACTTGGTTTAGC +
Preference number: 2 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIQVATE*DLTWFS
Trigger: GCTAAACCAAGTTAAGTCCCATTCAGTGGCAACTTG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAGAATGGGACTTAACTTaGTTTAGCACAACTTCTGAG +
Preference number: 2 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIEWDLT*FSTTSE
Trigger: CTCAGAAGTTGTGCTAAACCAAGTTAAGTCCCATTC...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGTCCCTCCCTTACCCATaGCACTTTACCCGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: LALLSAVHLSAGSARVSWSLPYP*HFTRSA
Trigger: AGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGGA...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCTCTGGGGGATCAGTGTaGCCTCCTCTAAACAGAGCT +
Preference number: 3 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLSGGSV*PPLNRA
Trigger: AGCTCTGTTTAGAGGAGGCAACACTGATCCCCCAGA...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 72 bp AATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTaGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAG +
Preference number: 3 (lower is better)
Translates to: NSPATSGCVQMG*ENLLPQVAVTQ
Trigger: CTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTTCCTGCCACCTCTGGTaGTGTTCAGATGGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSSCHLW*CSDGLG
Trigger: TCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGA...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR TCA 72 bp CTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCTaGGAAAGGACATTTGGAGGGCAAGCAAGCAACCCT +
Preference number: 3 (lower is better)
Translates to: LSAGSARVSWPL*ERTFGGQASNP
Trigger: AGGGTTGCTTGCTTGCCCTCCAAATGTCCTTTCTCAGAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR GCA 72 bp TGTTCAGATGGGCTGGGAGAACCTCCTTCCGCAGGTTaGCGTCACTCAGGTACCTATCACAAGTTGCCACTG +
Preference number: 3 (lower is better)
Translates to: CSDGLGEPPSAG*RHSGTYHKLPL
Trigger: CAGTGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCACCTCCTTCCGCAGGTaGCCGTCACTCAGGTACCTA +
Preference number: 3 (lower is better)
Translates to: KNSSLKVTHANPAAKESVTSFRR*PSLRYL
Trigger: TAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGT...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCGCCCCAATTGCCACCTaGAAAACCTTACCTATGATG +
Preference number: 3 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLAPIAT*KTLPMM
Trigger: CATCATAGGTAAGGTTTTCAAGGTGGCAATTGGGGC...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 72 bp GCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTaGTACACTAGAGGCTTGCCCTCTTGTCTGCTGTCC +
Preference number: 3 (lower is better)
Translates to: AQSTPCVFVGST*YTRGLPSCLLS
Trigger: GGACAGCAGACAAGAGGGCAAGCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR TCA 72 bp AATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTaGTGTCAACCAGCAGTCTTACCAGAAACTCGAGGT +
Preference number: 3 (lower is better)
Translates to: NACCLPAFMGWV*CQPAVLPETRG
Trigger: ACCTCGAGTTTCTGGTAAGACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGTCCTGCCACCTCTGGTaGTGTTCAGATGGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVSCHLW*CSDGLG
Trigger: TCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGA...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR TCA 72 bp GAGATCACAGACAAGCTAAGAACCCATCTAGACGTCTaGGCAGTTTCCAGGTGGAACACCCAAGGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: EITDKLRTHLDV*AVSRWNTQGLC
Trigger: ACAGAGGCCTTGGGTGTTCCACCTGGAAACTGCTCAGACGTCTAGATGGGTTCTTAGCTTGTCTGTGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 72 bp TTCCAGGTGGAACACCCAAGGCCTCTGTGTAGCTTATaGCCTCCTTTAGCACCACCACAATCTCTTTGTTCC +
Preference number: 3 (lower is better)
Translates to: FQVEHPRPLCSL*PPLAPPQSLCS
Trigger: GGAACAAAGAGATTGTGGTGGTGCTAAAGGAGGCCATAAGCTACACAGAGGCCTTGGGTGTTCCACCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGATCCCTCCCTTACCCATaGCACTTTACCCGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGSLPYP*HFTRSA
Trigger: AGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGGA...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCTCATCCCTGGAATGTaGATGTGGAGTGGGGTATCT +
Preference number: 3 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHLIPGM*MWSGVS
Trigger: AGATACCCCACTCCACATCAACATTCCAGGGATGAG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGACTCATCCCTGGAATGTaGATGTGGAGTGGGGTATCT +
Preference number: 3 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRLIPGM*MWSGVS
Trigger: AGATACCCCACTCCACATCAACATTCCAGGGATGAG...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCTGAAAAGCTTTCCATaGGAGATGATTGTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: LALLSAVHLSAGSARVSWLKSFP*EMIVKN
Trigger: GTTCTTGACAATCATCTCCAATGGAAAGCTTTTCAG...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACGCCCCAATTGCCACCTaGAAAACCTTACCTATGATG +
Preference number: 3 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHAPIAT*KTLPMM
Trigger: CATCATAGGTAAGGTTTTCAAGGTGGCAATTGGGGC...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGATAACCATTTTGGATTaGAGAGTTCACTTTGGGAAC +
Preference number: 3 (lower is better)
Translates to: LALLSAVHLSAGSARVSWITILD*RVHFGN
Trigger: GTTCCCAAAGTGAACTCTCAAATCCAAAATGGTTAT...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 72 bp TGGACCCTGTTTTCTGATGCCCAAAGATCAGGCTTCTaGGCCTTGTATCTCAGGCGCAATCTTATTGCATTG +
Preference number: 3 (lower is better)
Translates to: WTLFSDAQRSGF*ALYLRRNLIAL
Trigger: CAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAACAGGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 72 bp ATGTGGAGTGGGGTATCTCACATAAAGCACCATTCCTaGACCCTGTTTTCTGATGCCCAAAGATCAGGCTTC +
Preference number: 3 (lower is better)
Translates to: MWSGVSHIKHHS*TLFSDAQRSGF
Trigger: GAAGCCTGATCTTTGGGCATCAGAAAACAGGGTCCAGGAATGGTGCTTTATGTGAGATACCCCACTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCACTACATCACCGTTCTTaGCATTTTAGATTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPLHHRS*HFRFVL
Trigger: AAGGACAAATCTAAAATGCAAAGAACGGTGATGTAG...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR-3UTR CAA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATATCTGGGGGATCAGTGTaGCCTCCTCTAAACAGAGCT +
Preference number: 3 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVISGGSV*PPLNRA
Trigger: AGCTCTGTTTAGAGGAGGCAACACTGATCCCCCAGA...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CCA 72 bp CCGTCACTCAGGTACCTATCACAAGTTGCCACTGAATaGGACTTAACTTGGTTTAGCACAACTTCTGAGTGC +
Preference number: 3 (lower is better)
Translates to: PSLRYLSQVATE*DLTWFSTTSEC
Trigger: GCACTCAGAAGTTGTGCTAAACCAAGTTAAGTCCCATTCAGTGGCAACTTGTGATAGGTACCTGAGTGACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR GCA 72 bp AACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTaGATTTTAGATTTGTCCTTTGGACCATTAAGAGAC +
Preference number: 3 (lower is better)
Translates to: NRAVRPYYITVL*ILDLSFGPLRD
Trigger: GTCTCTTAATGGTCCAAAGGACAAATCTAAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGAGGCCGGCACGTCGCATaGGCCGGTGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRGRHVA*AGAPGR
Trigger: CCTTCCTGGAGCACCGGCGCATGCGACGTGCCGGCC...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGCGGCAATGCACAGTaGCACCGAGCCCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRCGNAQ*HRAPPR
Trigger: CCGCGGCGGGGCTCGGTGGCACTGTGCATTGCCGCA...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGGGGCAAACAGGCTGGTaGCCACCACACGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWGQTGW*PPHAGL
Trigger: CAGCCCTGCGTGTGGTGGGCACCAGCCTGTTTGCCC...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCTGCGGCAATGCACAGTaGCACCGAGCCCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGCGNAQ*HRAPPR
Trigger: CCGCGGCGGGGCTCGGTGGCACTGTGCATTGCCGCA...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAGGTCAGGGAAGGAGATaGGCTGGGCCGAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPGQGRR*AGPSAG
Trigger: GCCTGCGCTCGGCCCAGCGCATCTCCTTCCCTGACC...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGAGGTGCAGGCCCAGGATaGCGCCGTACAGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRGAGPG*RRTGRR
Trigger: CCTTCGGCCTGTACGGCGCCATCCTGGGCCTGCACC...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGGGGAAGGAGATGCGCTaGGCCGAGCGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWGKEMR*AERRHL
Trigger: CAAGTGCCTGCGCTCGGCCCAGCGCATCTCCTTCCC...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCTGCACGAGAAGGTGCTaGCCCGCACCACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLCTRRC*PAPHPA
Trigger: TGCGGGATGTGGTGCGGGCCAGCACCTTCTCGTGCA...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCTGCACCGGCATATGCTaGAGGGGCGCGGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVCTGIC*RGAAGP
Trigger: GGGTCCCGCCGCGCCCCTTCAGCATATGCCGGTGCA...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306560.1
CDS-3UTR GCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCTGGTATGCGGCAATaGACAGTGCCACCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWPGMRQ*TVPPSP
Trigger: GGGGCTCGGTGGCACTGTGCATTGCCGCATACCAGG...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCGGTCAGGGAAGGAGATaGGCTGGGCCGAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGGQGRR*AGPSAG
Trigger: GCCTGCGCTCGGCCCAGCGCATCTCCTTCCCTGACC...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGAGGGAAGGAGATGCGCTaGGCCGAGCGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRGKEMR*AERRHL
Trigger: CAAGTGCCTGCGCTCGGCCCAGCGCATCTCCTTCCC...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTACAAAGAAGCCGGCCTaGTCGGTGCCGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSTKKPA*SVPPST
Trigger: GGTGCTGGGCGGCACCGAGCAGGCCGGCTTCTTTGT...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAACGTCTCACCCTCGCCTaGCTCATGGAAGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQRLTLA*LMEVAA
Trigger: CGCAGCAACTTCCATGAGGCAGGCGAGGGTGAGACG...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCCGGTCCATGCCCTCCTaGAGGCTGGCCTCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGRSMPS*RLASVS
Trigger: TGAGACGGAGGCCAGCCTGCAGGAGGGCATGGACCG...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCTCGCCTGCCTCATaGAAGTTGCTGCGCCACACA +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWPSPAS*KLLRHT
Trigger: TGTGTGGCGCAGCAACTTCCATGAGGCAGGCGAGGG...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAACCCTCGCCTGCCTCATaGAAGTTGCTGCGCCACACA +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQPSPAS*KLLRHT
Trigger: TGTGTGGCGCAGCAACTTCCATGAGGCAGGCGAGGG...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACAGCAACCTGGGCGCTaGCGCCCCGCCTCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAQQPGR*RPASVQ
Trigger: CTGCACCGAGGCGGGGCGCCAGCGCCCAGGTTGCTG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306560.1
CDS-3UTR CCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCTCCTCCAGGAACTGCTaGAGGAGGCTGTTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLSSRNC*RRLLRY
Trigger: GTACCGCAACAGCCTCCTCCAGCAGTTCCTGGAGGA...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTGCCCGTCACATAGGCTaGCAGGATGCCACCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSARHIG*QDATQH
Trigger: GTGCTGGGTGGCATCCTGGCAGCCTATGTGACGGGC...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGGCCGGCACGTCGCATaGGCCGGTGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAGRHVA*AGAPGR
Trigger: CCTTCCTGGAGCACCGGCGCATGCGACGTGCCGGCC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGACCCGCACACGGTCCATaGCCTCCTGCAGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRPAHGP*PPAGWP
Trigger: AGGCCAGCCTGCAGGAGGGCATGGACCGTGTGCGGG...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTGCTGGAGGAGGCTGTTaGGGTACATGCCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSAGGGC*GTCPRA
Trigger: GGCCCTTGGGCATGTACCGCAACAGCCTCCTCCAGC...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCACCCTCCCAGGAGAACTaGCACCCAGATGGACACAGG +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPPSQEN*HPDGHR
Trigger: CCTGTGTCCATCTGGGTGGCAGTTCTCCTGGGAGGG...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGGCAGCTTCAGGGCCTaGCCGGCACGTCGCATGCGC +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAGSFRA*PARRMR
Trigger: GCGCATGCGACGTGCCGGCCAGGCCCTGAAGCTGCC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGATGCCCTCCTGCAGGCTaGCCTCCGTCTCACCCTCGC +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRCPPAG*PPSHPR
Trigger: GCGAGGGTGAGACGGAGGCCAGCCTGCAGGAGGGCA...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAACTGCCTAGGAACTTCTaGTGGTACCAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQLPRNF*WYQSSR
Trigger: CCTGGAGGACTGGTACCATCAGAAGTTCCTAGGCAG...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGGAAACCCGTGACCACTaGCTCGTAGGTCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWETRDH*LVGHPE
Trigger: CTCTGGATGACCTACGAGTCAGTGGTCACGGGTTTC...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGACGTCGCATGCGCCGGTaGTCCAGGAAGGCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRRRMRR*SRKAKR
Trigger: CCTTTTTGCCTTCCTGGAGCACCGGCGCATGCGACG...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTAGCCGGCCTGCTCGGTaGCGCCCAGCACCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFSRPAR*RPAPRG
Trigger: TCCACGAGGTGCTGGGCGGCACCGAGCAGGCCGGCT...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAAGCCGGCCTGCTCGGTaGCGCCCAGCACCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGSRPAR*RPAPRG
Trigger: TCCACGAGGTGCTGGGCGGCACCGAGCAGGCCGGCT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAACCTCCTTCCGCAGGTTaGCGTCACTCAGGTACCTAT +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQPPSAG*RHSGTY
Trigger: ATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGG...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCAGGGCTGTCGTCAGCTaGACCGGCATCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGRAVVS*TGILQG
Trigger: TCCTTGCAGGATGCCGGTGCAGCTGACGACAGCCCT...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569188.6
CDS-3UTR CCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGGGTGCAGGCCCAGGATaGCGCCGTACAGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVGAGPG*RRTGRR
Trigger: CCTTCGGCCTGTACGGCGCCATCCTGGGCCTGCACC...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAACTCGATGGTGCAGGCTaGATCCAGCACAGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQLDGAG*IQHSVR
Trigger: TCTGACACTGTGCTGGATCCAGCCTGCACCATCGAG...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAACTCGAAGCATCTCGATaGTGCAGGCTGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQLEASR*CRLDPA
Trigger: TGCTGGATCCAGCCTGCACCATCGAGATGCTTCGAG...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCCCGACTCCCCCTACTTaGGGATCCTCCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGPTPPT*GSSSRT
Trigger: AGTCCTGGAGGAGGATCCCCAAGTAGGGGGAGTCGG...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCTACTTGTTGAGGATCTaGACATCTCCCCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLYLLRI*TSPPTP
Trigger: GGGAGTCGGGGGAGATGTCCAGATCCTCAACAAGTA...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATCCTCCAGGAACTGCTaGAGGAGGCTGTTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRSSRNC*RRLLRY
Trigger: GTACCGCAACAGCCTCCTCCAGCAGTTCCTGGAGGA...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGACTCCAGCGGGTTTGCTaGTTGAGCCACCGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRLQRVC*LSHRRY
Trigger: GTACCTCCGGTGGCTCAACCAGCAAACCCGCTGGAG...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAATTTACCCGCTCTGCTTaGGGGCCATGTCACACCTCA +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQFTRSA*GPCHTS
Trigger: TGAGGTGTGACATGGCCCCCAAGCAGAGCGGGTAAA...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCCTGCAGCCCTGCATCTaGGGGATCAGTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGLQPCI*GISVAS
Trigger: GGAGGCAACACTGATCCCCCAGATGCAGGGCTGCAG...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAATGTGTTCAGATGGGCTaGGAGAACCTCCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQCVQMG*ENLLPQ
Trigger: CTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACACA...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCGCAAAACCTTCCTGCTaGCAGGAAAGAGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLAKPSC*QERGAE
Trigger: TTCAGCGCCTCTTTCCTGCCAGCAGGAAGGTTTTGC...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569188.6
CDS-3UTR TCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGAAAGGCAAAAAGGCTCTaGATGAGCAGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRKAKRL*MSRCRP
Trigger: GGGCCTGCACCTGCTCATTCAGAGCCTTTTTGCCTT...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTCTCCCCACTTCTGCATaGTGCACGAGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSLPTSA*CTRRCW
Trigger: CCAGCACCTTCTCGTGCATCATGCAGAAGTGGGGAG...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGATCAGGACTCGGTTGGTaGGGTGCCGGTCATCCCCGA +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRSGLGW*GAGHPR
Trigger: TCGGGGATGACCGGCACCTCACCAACCGAGTCCTGA...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAGAAACCCGTGACCACTaGCTCGTAGGTCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPETRDH*LVGHPE
Trigger: CTCTGGATGACCTACGAGTCAGTGGTCACGGGTTTC...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAAGGGGAAGAAACCCGTaGCCACTGACTCGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPRGRNP*PLTRRS
Trigger: TGACCTACGAGTCAGTGGTCACGGGTTTCTTCCCCT...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTTGGCCAGATATAGCATaGGGAGGGCCACCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSWPDIA*GGPPSS
Trigger: GCTACTGGGTGGCCCTCCTCATGCTATATCTGGCCA...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCCTGGACCCTGTTTTCTaGTGCCCAAAGATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLLDPVF*CPKIRL
Trigger: AAGCCTGATCTTTGGGCATCAGAAAACAGGGTCCAG...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGACCCATCTAGACGTCTaGGCAGTTTCCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWTHLDV*AVSRWN
Trigger: GTTCCACCTGGAAACTGCTCAGACGTCTAGATGGGT...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGAGTTCCCATATGTGCTaGGAACACGCTTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWSSHMC*EHACLL
Trigger: CAGGAGGCAAGCGTGTTCTCAGCACATATGGGAACT...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAGCCCTTAGCGAAGTCTaGACTCTGCACTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPALSEV*TLHLAD
Trigger: GTCAGCCAAGTGCAGAGTTCAGACTTCGCTAAGGGC...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGGGCAAACAGGCTGGTaGCCACCACACGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAGQTGW*PPHAGL
Trigger: CAGCCCTGCGTGTGGTGGGCACCAGCCTGTTTGCCC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCATAGGCTGCCAGGATaGCACCCAGCACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHHRLPG*HPALPG
Trigger: CCCTGGCAGTGCTGGGTGGCATCCTGGCAGCCTATG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAACAAAGAAGCCGGCCTaGTCGGTGCCGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKATKKPA*SVPPST
Trigger: GGTGCTGGGCGGCACCGAGCAGGCCGGCTTCTTTGT...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCGGTCCATGCCCTCCTaGAGGCTGGCCTCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVRSMPS*RLASVS
Trigger: TGAGACGGAGGCCAGCCTGCAGGAGGGCATGGACCG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGAGCTGGAGGAGGCTGTTaGGGTACATGCCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRAGGGC*GTCPRA
Trigger: GGCCCTTGGGCATGTACCGCAACAGCCTCCTCCAGC...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAATAATGCCCACCAGCTaGACCGTCAGCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPIMPTS*TVSRKR
Trigger: CCTCTTCCTGCTGACGGTGCAGCTGGTGGGCATTAT...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGAGGCTACTGCCTATGTaGAGATGCAAGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWRLLPM*RCKQTG
Trigger: GCCTGTCTGCTTGCATCTGCACATAGGCAGTAGCCT...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCACCAGGAGGAGGCTACTaGCTATGTGCAGATGCAAGC +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPPGGGY*LCADAS
Trigger: GCTTGCATCTGCACATAGGCAGTAGCCTCCTCCTGG...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCAGCACAACTTCTGAGTaGCCTCTGGAGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGSTTSE*PLEPRR
Trigger: CCTCCTGGGCTCCAGAGGGCACTCAGAAGTTGTGCT...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGACCTCCTTCCGCAGGTTaGCGTCACTCAGGTACCTAT +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRPPSAG*RHSGTY
Trigger: ATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGG...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAGAAAGCACCAGGGTTTaGCCATCTGTGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPESTRV*PSVAQS
Trigger: GCTCTGAGCCACAGATGGGCAAACCCTGGTGCTTTC...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCGCGAAGTCTGAACTCTaGACTTGGCTGACCGGATTT +
Preference number: 4 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLAKSEL*TWLTGF
Trigger: AAATCCGGTCAGCCAAGTGCAGAGTTCAGACTTCGC...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTGCCCTCCTGCAGGCTaGCCTCCGTCTCACCCTCGC +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTCPPAG*PPSHPR
Trigger: GCGAGGGTGAGACGGAGGCCAGCCTGCAGGAGGGCA...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACTGCACGAGAAGGTGCTaGCCCGCACCACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHCTRRC*PAPHPA
Trigger: TGCGGGATGTGGTGCGGGCCAGCACCTTCTCGTGCA...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCACTCGAAGCATCTCGATaGTGCAGGCTGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPLEASR*CRLDPA
Trigger: TGCTGGATCCAGCCTGCACCATCGAGATGCTTCGAG...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCAAAGATCAGGCTTCTaGGCCTTGTATCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWQRSGF*ALYLRR
Trigger: GCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTG...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CAA 72 bp AGAATCCCCTGCAGCCCTGCATCTGGGGGATCAGTGTaGCCTCCTCTAAACAGAGCTGTCAGGCCATACTAC +
Preference number: 4 (lower is better)
Translates to: RIPCSPASGGSV*PPLNRAVRPYY
Trigger: GTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGCAACACTGATCCCCCAGATGCAGGGCTGCAGGGGATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CAA 72 bp GTGTTCAGATGGGCTGGGAGAACCTCCTTCCGCAGGTaGCCGTCACTCAGGTACCTATCACAAGTTGCCACT +
Preference number: 4 (lower is better)
Translates to: VFRWAGRTSFRR*PSLRYLSQVAT
Trigger: AGTGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCATCTGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTTCAGGACTCGGTTGGTaGGGTGCCGGTCATCCCCGA +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLSGLGW*GAGHPR
Trigger: TCGGGGATGACCGGCACCTCACCAACCGAGTCCTGA...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCTGGCCAGATATAGCATaGGGAGGGCCACCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVWPDIA*GGPPSS
Trigger: GCTACTGGGTGGCCCTCCTCATGCTATATCTGGCCA...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCTGGACCCTGTTTTCTaGTGCCCAAAGATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWLDPVF*CPKIRL
Trigger: AAGCCTGATCTTTGGGCATCAGAAAACAGGGTCCAG...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTACGCTTGCCTCCTGCTaGAGCTTCTATAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSTLASC*SFYKSR
Trigger: CCGGCTCTTATAGAAGCTTCAGCAGGAGGCAAGCGT...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTCCCTGGAGAAGCCACTaGGGAGAATGGATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSPWRSH*GEWMVS
Trigger: TGAGACCATCCATTCTCCTCAGTGGCTTCTCCAGGG...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTGCCCTTAGCGAAGTCTaGACTCTGCACTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSALSEV*TLHLAD
Trigger: GTCAGCCAAGTGCAGAGTTCAGACTTCGCTAAGGGC...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCGAAGCATCTCGATGGTaGAGGCTGGATCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGEASRW*RLDPAQ
Trigger: CTGTGCTGGATCCAGCCTGCACCATCGAGATGCTTC...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGAGGTCATCCCCGAAGCTaGACTTGCTGCCTAGGAACT +
Preference number: 4 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRGHPRS*TCCLGT
Trigger: AGTTCCTAGGCAGCAAGTGCAGCTTCGGGGATGACC...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCCCTCCCAGGAGAACTaGCACCCAGATGGACACAGG +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHPSQEN*HPDGHR
Trigger: CCTGTGTCCATCTGGGTGGCAGTTCTCCTGGGAGGG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGACCCTCCCTTACCCATTaGACTTTACCCGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRPSLTH*TLPALL
Trigger: AAGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGG...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGACCAGGGCAAACAGGCTaGTGCCCACCACACGCAGGG +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGPGQTG*CPPHAG
Trigger: CCCTGCGTGTGGTGGGCACCAGCCTGTTTGCCCTGG...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTCCAGGGCAAACAGGCTaGTGCCCACCACACGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTPGQTG*CPPHAG
Trigger: CCCTGCGTGTGGTGGGCACCAGCCTGTTTGCCCTGG...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTTGGCCGGCAGAAGGCTaGACATATAGAGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSWPAEG*TYRGGS
Trigger: ACTCCCTCCTCTATATGTCCAGCCTTCTGCCGGCCA...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCACTGGTTGTGTTCAGATaGGCTGGGAGAACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPLVVFR*AGRTSF
Trigger: GAAGGAGGTTCTCCCAGCCCATCTGAACACAACCAG...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCATTCTCCTGCCACCTCTaGTTGTGTTCAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPFSCHL*LCSDGL
Trigger: CAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAA...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAGTGCTAACTCCCTGCTaGTTTGGCTCATCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPVLTPC*FGSSLE
Trigger: TTCCAGGGATGAGCCAAACCAGCAGGGAGTTAGCAC...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCTGAGAAAGGACATTTaGAGGGCAAGCAAGCAACCC +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWLRKDI*RASKQP
Trigger: GGGTTGCTTGCTTGCCCTCCAAATGTCCTTTCTCAG...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTGCTTTTCCGTGTGGATaGACTGGTAGCCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSAFPCG*TGSPSH
Trigger: ATGTGACGGGCTACCAGTTCATCCACACGGAAAAGC...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCCTGCCTAGGAACTTCTaGTGGTACCAGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVLPRNF*WYQSSR
Trigger: CCTGGAGGACTGGTACCATCAGAAGTTCCTAGGCAG...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCGTTAGCTGGCCCCTCTaGGAAAGGACATTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVVSWPL*ERTFGG
Trigger: CCCTCCAAATGTCCTTTCTCAGAGGGGCCAGCTAAC...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAAACTCTGCACTTGGCTaGCCGGATTTCCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPNSALG*PDFLHS
Trigger: AGAATGGAGGAAATCCGGTCAGCCAAGTGCAGAGTT...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCATAGGCTGCCAGGATaGCACCCAGCACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFHRLPG*HPALPG
Trigger: CCCTGGCAGTGCTGGGTGGCATCCTGGCAGCCTATG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCGTCGCATGCGCCGGTaGTCCAGGAAGGCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVRRMRR*SRKAKR
Trigger: CCTTTTTGCCTTCCTGGAGCACCGGCGCATGCGACG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACAGGGTCCTCCTGGTATaGGGCAATGCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHRVLLV*GNAQCH
Trigger: GTGGCACTGTGCATTGCCGCATACCAGGAGGACCCT...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTCCGAGCGCAGGCACTTaGGCAAGTAGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLPSAGT*ASSQGP
Trigger: AGGACCCTGACTACTTGCGCAAGTGCCTGCGCTCGG...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCCGAGCGCAGGCACTTaGGCAAGTAGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVPSAGT*ASSQGP
Trigger: AGGACCCTGACTACTTGCGCAAGTGCCTGCGCTCGG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTCGTCTCACCCTCGCCTaGCTCATGGAAGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLRLTLA*LMEVAA
Trigger: CGCAGCAACTTCCATGAGGCAGGCGAGGGTGAGACG...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGATTGCCTCCCCACTTCTaGATGATGCACGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRLPPHF*MMHEKV
Trigger: CACCTTCTCGTGCATCATGCAGAAGTGGGGAGGCAA...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTTTGCCTCCCCACTTCTaGATGATGCACGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSLPPHF*MMHEKV
Trigger: CACCTTCTCGTGCATCATGCAGAAGTGGGGAGGCAA...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACAGTCCTCCAGGAACTaGTGGAGGAGGCTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAQSSRN*WRRLLR
Trigger: CCGCAACAGCCTCCTCCAGCAGTTCCTGGAGGACTG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCATTGCTCCAGCGGGTTTaGTGGTTGAGCCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKALLQRV*WLSHRR
Trigger: CCTCCGGTGGCTCAACCAGCAAACCCGCTGGAGCAA...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGATCAGTGCTAACTCCCTaGTGGTTTGGCTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRSVLTP*WFGSSL
Trigger: CAGGGATGAGCCAAACCAGCAGGGAGTTAGCACTGA...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTGGTACACTAGAGGCTTaGCCTCTTGTCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSGTLEA*PLVCCP
Trigger: TGGACAGCAGACAAGAGGGCAAGCCTCTAGTGTACC...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACTCTTCCCCGACTTCTaGACGCGAAGGGGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKALFPDF*TRRGSS
Trigger: CGAACTGCCCCTTCGCGTGCAGAAGTCGGGGAAGAG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569188.6
CDS-3UTR CCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTCAATGGCAAAGATCTTaGCCGGCAGAAGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSQWQRS*PAEGWT
Trigger: TGTCCAGCCTTCTGCCGGCCAAGATCTTTGCCATTG...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCTGCAGCCCTGCATCTaGGGGATCAGTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVLQPCI*GISVAS
Trigger: GGAGGCAACACTGATCCCCCAGATGCAGGGCTGCAG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTTTCTCCTGCCACCTCTaGTTGTGTTCAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSFSCHL*LCSDGL
Trigger: CAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAA...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGAGGGTTTGCCCATCTGTaGCTCAGAGCACACCTTGCG +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRGFAHL*LRAHLA
Trigger: CGCAAGGTGTGCTCTGAGCCACAGATGGGCAAACCC...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATCTGAACTCTGCACTTaGCTGACCGGATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRSELCT*LTGFPP
Trigger: TGGAGGAAATCCGGTCAGCCAAGTGCAGAGTTCAGA...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGAAGGGGAAGAAACCCGTaGCCACTGACTCGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRRGRNP*PLTRRS
Trigger: TGACCTACGAGTCAGTGGTCACGGGTTTCTTCCCCT...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGACTAGCTCTGTCTCACTaGACAGGTCCTGGCAATAAG +
Preference number: 4 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRLALSH*TGPGNK
Trigger: CTTATTGCCAGGACCTGTTCAGTGAGACAGAGCTAG...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAGCAAGGAAGGCGAGCTaGGAGCACTCTTCCCCGACT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGARKAS*EHSSPT
Trigger: AGTCGGGGAAGAGTGCTCTCAGCTCGCCTTCCTTGC...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGAGGGTCCTCCTGGTATaGGGCAATGCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVRVLLV*GNAQCH
Trigger: GTGGCACTGTGCATTGCCGCATACCAGGAGGACCCT...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACGAAGCATCTCGATGGTaGAGGCTGGATCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHEASRW*RLDPAQ
Trigger: CTGTGCTGGATCCAGCCTGCACCATCGAGATGCTTC...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTCAGTCCTCCAGGAACTaGTGGAGGAGGCTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTQSSRN*WRRLLR
Trigger: CCGCAACAGCCTCCTCCAGCAGTTCCTGGAGGACTG...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGCACTTTACCCGCTCTaGTTGGGGGCCATGTCACAC +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAALYPL*LGAMSH
Trigger: GTGTGACATGGCCCCCAAGCAGAGCGGGTAAAGTGC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACAAACACAGAATCCCCTaGAGCCCTGCATCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHKHRIP*SPASGG
Trigger: TCCCCCAGATGCAGGGCTGCAGGGGATTCTGTGTTT...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCGCCTTAGCAAATGCCTaGTGCCTTCCAGCCTTCATG +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVALANA*CLPAFM
Trigger: CATGAAGGCTGGAAGGCAGCAGGCATTTGCTAAGGC...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGACCGACTCCCCCTACTTaGGGATCCTCCTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGPTPPT*GSSSRT
Trigger: AGTCCTGGAGGAGGATCCCCAAGTAGGGGGAGTCGG...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCTCCAGCGGGTTTGCTaGTTGAGCCACCGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFLQRVC*LSHRRY
Trigger: GTACCTCCGGTGGCTCAACCAGCAAACCCGCTGGAG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACTTTACCCGCTCTGCTTaGGGGCCATGTCACACCTCA +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHFTRSA*GPCHTS
Trigger: TGAGGTGTGACATGGCCCCCAAGCAGAGCGGGTAAA...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAACCTGGAATGTTGATGTaGAGTGGGGTATCTCACATA +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQPGMLM*SGVSHI
Trigger: TATGTGAGATACCCCACTCCACATCAACATTCCAGG...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAACGCTGAGAACAGCCTaGATTGCAAGTCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPTLRTA*IASHWK
Trigger: TTTCCAGTGACTTGCAATCCAGGCTGTTCTCAGCGT...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTGGGTTTGCCCATCTGTaGCTCAGAGCACACCTTGCG +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLGFAHL*LRAHLA
Trigger: CGCAAGGTGTGCTCTGAGCCACAGATGGGCAAACCC...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGAAGCAGAACGATTGCCTaGATCAGCTGCCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRSRTIA*ISCLSK
Trigger: TTTGCTAAGGCAGCTGATCCAGGCAATCGTTCTGCT...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACGCTTTTCCGTGTGGATaGACTGGTAGCCCGTCACAT +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHAFPCG*TGSPSH
Trigger: ATGTGACGGGCTACCAGTTCATCCACACGGAAAAGC...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCATGAGTCGTACTTGTTaGGGATCTGGACATCTCCCC +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVMSRTC*GSGHLP
Trigger: GGGGAGATGTCCAGATCCTCAACAAGTACGACTCAT...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGACAGGAAGGAAATCCATaGGTCGTACTTGTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRQEGNP*VVLVED
Trigger: ATCCTCAACAAGTACGACTCATGGATTTCCTTCCTG...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCTCATCCCTGGAATGTTaGTGTGGAGTGGGGTATCTC +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVSSLEC*CGVGYL
Trigger: GAGATACCCCACTCCACATCAACATTCCAGGGATGA...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAACGCTTGCCTCCTGCTaGAGCTTCTATAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKATLASC*SFYKSR
Trigger: CCGGCTCTTATAGAAGCTTCAGCAGGAGGCAAGCGT...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCCCTGGAGAAGCCACTaGGGAGAATGGATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVPWRSH*GEWMVS
Trigger: TGAGACCATCCATTCTCCTCAGTGGCTTCTCCAGGG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGTTAGCTGGCCCCTCTaGGAAAGGACATTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAVSWPL*ERTFGG
Trigger: CCCTCCAAATGTCCTTTCTCAGAGGGGCCAGCTAAC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGATTCATGGGTTGGGTCTaGTGTCAACCAGCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRFMGWV*CQPAVL
Trigger: TAAGACTGCTGGTTGACATCAGACCCAACCCATGAA...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACCTGGTATGCGGCAATaGACAGTGCCACCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIPGMRQ*TVPPSP
Trigger: GGGGCTCGGTGGCACTGTGCATTGCCGCATACCAGG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTCCTCATGGAAGTTGCTaGGCCACACAAAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLPHGSC*ATQRSR
Trigger: CCGGCTTCTTTGTGTGGCGCAGCAACTTCCATGAGG...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCCTCATGGAAGTTGCTaGGCCACACAAAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVPHGSC*ATQRSR
Trigger: CCGGCTTCTTTGTGTGGCGCAGCAACTTCCATGAGG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCCCGGAAGTAAGACTTaGTCCAGCGGGTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVPGSKT*SSGFAG
Trigger: ACCAGCAAACCCGCTGGAGCAAGTCTTACTTCCGGG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCAAAGCCAAGCTGTACTaGTCCGGCTTCTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVKAKLY*SGFFPH
Trigger: ATGTGGGAAGAAGCCGGAGCAGTACAGCTTGGCTTT...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTGCACTTTACCCGCTCTaGTTGGGGGCCATGTCACAC +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFALYPL*LGAMSH
Trigger: GTGTGACATGGCCCCCAAGCAGAGCGGGTAAAGTGC...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTAGCACAACTTCTGAGTaGCCTCTGGAGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFSTTSE*PLEPRR
Trigger: CCTCCTGGGCTCCAGAGGGCACTCAGAAGTTGTGCT...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCAGGCGCAATCTTATTaGATTGATGACTACTTAGGG +
Preference number: 4 (lower is better)
Translates to: LALLSAVHLSAGSARVSWQAQSY*IDDYLG
Trigger: CCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTG...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGAAAGCACCAGGGTTTaGCCATCTGTGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAESTRV*PSVAQS
Trigger: GCTCTGAGCCACAGATGGGCAAACCCTGGTGCTTTC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACTCGATGGTGCAGGCTaGATCCAGCACAGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKALDGAG*IQHSVR
Trigger: TCTGACACTGTGCTGGATCCAGCCTGCACCATCGAG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGACAATGGCAAAGATCTTaGCCGGCAGAAGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRQWQRS*PAEGWT
Trigger: TGTCCAGCCTTCTGCCGGCCAAGATCTTTGCCATTG...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCGGTTTGGCTCATCCCTaGAATGTTGATGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVGLAHP*NVDVEW
Trigger: CCACTCCACATCAACATTCCAGGGATGAGCCAAACC...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTAAGGCAAAAAGGCTCTaGATGAGCAGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTKAKRL*MSRCRP
Trigger: GGGCCTGCACCTGCTCATTCAGAGCCTTTTTGCCTT...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTACCCATCTAGACGTCTaGGCAGTTTCCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLTHLDV*AVSRWN
Trigger: GTTCCACCTGGAAACTGCTCAGACGTCTAGATGGGT...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCATGCCTGTTTTTGATTTaGGGAAAGTTGACGACCACA +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPCLFLI*GKLTTT
Trigger: TGTGGTCGTCAACTTTCCTCAAATCAAAAACAGGCA...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGCCTGTTTTTGATTTaGGGAAAGTTGACGACCACA +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRCLFLI*GKLTTT
Trigger: TGTGGTCGTCAACTTTCCTCAAATCAAAAACAGGCA...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGTCCAGTACCGCACGCTaGTCAGGAAGGAAATCCATG +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVSSTAR*SGRKSM
Trigger: CATGGATTTCCTTCCTGAGCAGCGTGCGGTACTGGA...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTCCCCGAAGCTGCACTTaGTGCCTAGGAACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLPRSCT*CLGTSD
Trigger: ATCAGAAGTTCCTAGGCAGCAAGTGCAGCTTCGGGG...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCCCCGAAGCTGCACTTaGTGCCTAGGAACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVPRSCT*CLGTSD
Trigger: ATCAGAAGTTCCTAGGCAGCAAGTGCAGCTTCGGGG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAGGTCATCCCCGAAGCTaGACTTGCTGCCTAGGAACT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGGHPRS*TCCLGT
Trigger: AGTTCCTAGGCAGCAAGTGCAGCTTCGGGGATGACC...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATATTGCTCCAGCGGGTTTaGTGGTTGAGCCACCGGAGG +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVILLQRV*WLSHRR
Trigger: CCTCCGGTGGCTCAACCAGCAAACCCGCTGGAGCAA...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACGTCATCCAGAGGTGGTaGTTATGGAACCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHVIQRW*LWNHRE
Trigger: CTCTCTGTGGTTCCATAAGCACCACCTCTGGATGAC...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTATAATGCCCACCAGCTaGACCGTCAGCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTIMPTS*TVSRKR
Trigger: CCTCTTCCTGCTGACGGTGCAGCTGGTGGGCATTAT...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAAATCCCCTGCAGCCCTaGATCTGGGGGATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGNPLQP*IWGISV
Trigger: AACACTGATCCCCCAGATGCAGGGCTGCAGGGGATT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTAAACACAGAATCCCCTaGAGCCCTGCATCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTKHRIP*SPASGG
Trigger: TCCCCCAGATGCAGGGCTGCAGGGGATTCTGTGTTT...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTCTGCCTATGTGCAGATaGAAGCAGACAGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLLPMCR*KQTGSL
Trigger: CAGACTGCCTGTCTGCTTGCATCTGCACATAGGCAG...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTCCAGGAGGAGGCTACTaGCTATGTGCAGATGCAAGC +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTPGGGY*LCADAS
Trigger: GCTTGCATCTGCACATAGGCAGTAGCCTCCTCCTGG...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGTCAGTGCTAACTCCCTaGTGGTTTGGCTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVSVLTP*WFGSSL
Trigger: CAGGGATGAGCCAAACCAGCAGGGAGTTAGCACTGA...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTGGGCTCCGCCCCAATTaGCACCTTGAAAACCTTACC +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTGLRPN*HLENLT
Trigger: GGTAAGGTTTTCAAGGTGGCAATTGGGGCGGAGCCC...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAAAAGAAGCAGGCAAATaGAGTGACTGTCACAACTTG +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPKEAGK*SDCHNL
Trigger: CAAGTTGTGACAGTCACTGCATTTGCCTGCTTCTTT...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGGTACACTAGAGGCTTaGCCTCTTGTCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAGTLEA*PLVCCP
Trigger: TGGACAGCAGACAAGAGGGCAAGCCTCTAGTGTACC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGAGCTCAGAGCACACCTTaGGTCTTTGTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRAQSTP*VFVGST
Trigger: AGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGC...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACTTAGCAAATGCCTGCTaGCTTCCAGCCTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHLANAC*LPAFMG
Trigger: ACCCATGAAGGCTGGAAGGCAGCAGGCATTTGCTAA...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAGCAGCAAAACCTTCCTaGTGGCAGGAAAGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGAAKPS*WQERGA
Trigger: AGCGCCTCTTTCCTGCCAGCAGGAAGGTTTTGCTGC...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569188.6
CDS-3UTR CCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTTACTTGTTGAGGATCTaGACATCTCCCCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLYLLRI*TSPPTP
Trigger: GGGAGTCGGGGGAGATGTCCAGATCCTCAACAAGTA...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTTGGCCGGCAGAAGGCTaGACATATAGAGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFWPAEG*TYRGGS
Trigger: ACTCCCTCCTCTATATGTCCAGCCTTCTGCCGGCCA...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTCAAAGATCAGGCTTCTaGGCCTTGTATCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLQRSGF*ALYLRR
Trigger: GCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTG...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCATAAAGCACCATTCCTaGACCCTGTTTTCTGATGCC +
Preference number: 4 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGIKHHS*TLFSDA
Trigger: GGCATCAGAAAACAGGGTCCAGGAATGGTGCTTTAT...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAAATGTTGATGTGGAGTaGGGTATCTCACATAAAGCA +
Preference number: 4 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQNVDVE*GISHKA
Trigger: TGCTTTATGTGAGATACCCCACTCCACATCAACATT...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACGGTTTGGCTCATCCCTaGAATGTTGATGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHGLAHP*NVDVEW
Trigger: CCACTCCACATCAACATTCCAGGGATGAGCCAAACC...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGAAACTCCCTGCTGGTTTaGCTCATCCCTGGAATGTTG +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRNSLLV*LIPGML
Trigger: CAACATTCCAGGGATGAGCCAAACCAGCAGGGAGTT...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGGTGCTAACTCCCTGCTaGTTTGGCTCATCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVVLTPC*FGSSLE
Trigger: TTCCAGGGATGAGCCAAACCAGCAGGGAGTTAGCAC...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTACTGTTAGCTACACCTaGAAAACCCTTGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSTVSYT*KTLEFV
Trigger: CACGAACTCAAGGGTTTTCCAGGTGTAGCTAACAGT...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTGGGAGTAGAGGGACATaGAGATCATCTCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLGSRGT*RSSLHC
Trigger: GCAATGCAGAGATGATCTTCATGTCCCTCTACTCCC...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTATCACAAGTTGCCACTaGATGGGACTTAACTTGGTT +
Preference number: 4 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSITSCH*MGLNLV
Trigger: AACCAAGTTAAGTCCCATTCAGTGGCAACTTGTGAT...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGTCATCCCTGGAATGTTaGTGTGGAGTGGGGTATCTC +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVSSLEC*CGVGYL
Trigger: GAGATACCCCACTCCACATCAACATTCCAGGGATGA...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTAGTTCCCATATGTGCTaGGAACACGCTTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFSSHMC*EHACLL
Trigger: CAGGAGGCAAGCGTGTTCTCAGCACATATGGGAACT...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAAACTCTGCACTTGGCTaGCCGGATTTCCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKANSALG*PDFLHS
Trigger: AGAATGGAGGAAATCCGGTCAGCCAAGTGCAGAGTT...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTTCCAGTACCGCACGCTaGTCAGGAAGGAAATCCATG +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFSSTAR*SGRKSM
Trigger: CATGGATTTCCTTCCTGAGCAGCGTGCGGTACTGGA...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTGTCATCCAGAGGTGGTaGTTATGGAACCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLVIQRW*LWNHRE
Trigger: CTCTCTGTGGTTCCATAAGCACCACCTCTGGATGAC...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGACATGAAGATCATCTCTaGATTGCCCCGAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRHEDHL*IAPKEA
Trigger: TGCTTCCTTCGGGGCAATGCAGAGATGATCTTCATG...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGACCCTCCCTTACCCATTaGACTTTACCCGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGPSLTH*TLPALL
Trigger: AAGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGG...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCAGAATGGGACTTAACTTaGTTTAGCACAACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPEWDLT*FSTTSE
Trigger: CTCAGAAGTTGTGCTAAACCAAGTTAAGTCCCATTC...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAAACTCCCTGCTGGTTTaGCTCATCCCTGGAATGTTG +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKANSLLV*LIPGML
Trigger: CAACATTCCAGGGATGAGCCAAACCAGCAGGGAGTT...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACCTCTGTGTAGCTTATaGCCTCCTTTAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAPLCSL*PPLAPP
Trigger: TGGTGGTGCTAAAGGAGGCCATAAGCTACACAGAGG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATTTCATCTCCTAGTTTaGTTTCTGGAAAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGPARSVEILLPPLVVFRFHLLV*FLERSR
Trigger: CCTGCTTCTTTCCAGAAACCAAACTAGGAGATGAAA...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACTGAGAAAGGACATTTaGAGGGCAAGCAAGCAACCC +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKALRKDI*RASKQP
Trigger: GGGTTGCTTGCTTGCCCTCCAAATGTCCTTTCTCAG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAATGAGTCGTACTTGTTaGGGATCTGGACATCTCCCC +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGMSRTC*GSGHLP
Trigger: GGGGAGATGTCCAGATCCTCAACAAGTACGACTCAT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTTTCATGGGTTGGGTCTaGTGTCAACCAGCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLFMGWV*CQPAVL
Trigger: TAAGACTGCTGGTTGACATCAGACCCAACCCATGAA...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGACGAAGCTGCACTTGCTaGCTAGGAACTTCTGATGGT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGRSCTC*LGTSDG
Trigger: ACCATCAGAAGTTCCTAGGCAGCAAGTGCAGCTTCG...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCGAAGCTGCACTTGCTaGCTAGGAACTTCTGATGGT +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFRSCTC*LGTSDG
Trigger: ACCATCAGAAGTTCCTAGGCAGCAAGTGCAGCTTCG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACCCGGAAGTAAGACTTaGTCCAGCGGGTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIPGSKT*SSGFAG
Trigger: ACCAGCAAACCCGCTGGAGCAAGTCTTACTTCCGGG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAAAAGCCAAGCTGTACTaGTCCGGCTTCTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGKAKLY*SGFFPH
Trigger: ATGTGGGAAGAAGCCGGAGCAGTACAGCTTGGCTTT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTGCTCAGAGCACACCTTaGGTCTTTGTAGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTAQSTP*VFVGST
Trigger: AGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGC...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTTAGCAAATGCCTGCTaGCTTCCAGCCTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTLANAC*LPAFMG
Trigger: ACCCATGAAGGCTGGAAGGCAGCAGGCATTTGCTAA...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTATTGCCTGGATCAGCTaGCTTAGCAAATGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTIAWIS*LSKCLL
Trigger: CAGCAGGCATTTGCTAAGGCAGCTGATCCAGGCAAT...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAGCGAAGTCTGAACTCTaGACTTGGCTGACCGGATTT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGAKSEL*TWLTGF
Trigger: AAATCCGGTCAGCCAAGTGCAGAGTTCAGACTTCGC...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCCTGGAATGTTGATGTaGAGTGGGGTATCTCACATA +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHPGMLM*SGVSHI
Trigger: TATGTGAGATACCCCACTCCACATCAACATTCCAGG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGTTTGTAGGAAGCACTTaGTACACTAGAGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVFVGST*YTRGLP
Trigger: GGGCAAGCCTCTAGTGTACCAAGTGCTTCCTACAAA...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGAGCAGAACGATTGCCTaGATCAGCTGCCTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVSRTIA*ISCLSK
Trigger: TTTGCTAAGGCAGCTGATCCAGGCAATCGTTCTGCT...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGATCTGAACTCTGCACTTaGCTGACCGGATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGSELCT*LTGFPP
Trigger: TGGAGGAAATCCGGTCAGCCAAGTGCAGAGTTCAGA...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTGCTTTCCATTGGAGATaGTTGTCAAGAACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLAFHWR*LSRTVA
Trigger: GGCTACTGTTCTTGACAATCATCTCCAATGGAAAGC...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACTGCCTATGTGCAGATaGAAGCAGACAGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVILPMCR*KQTGSL
Trigger: CAGACTGCCTGTCTGCTTGCATCTGCACATAGGCAG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAGCCTTAGCAAATGCCTaGTGCCTTCCAGCCTTCATG +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIALANA*CLPAFM
Trigger: CATGAAGGCTGGAAGGCAGCAGGCATTTGCTAAGGC...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCAAGTTGCCACTGAATaGGACTTAACTTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHQVATE*DLTWFS
Trigger: GCTAAACCAAGTTAAGTCCCATTCAGTGGCAACTTG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACTGGTTGTGTTCAGATaGGCTGGGAGAACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVILVVFR*AGRTSF
Trigger: GAAGGAGGTTCTCCCAGCCCATCTGAACACAACCAG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGATAAAGCACCATTCCTaGACCCTGTTTTCTGATGCC +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVIKHHS*TLFSDA
Trigger: GGCATCAGAAAACAGGGTCCAGGAATGGTGCTTTAT...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCTTTCATCTCCTAGTTTaGTTTCTGGAAAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KNSSLKVTHANPAAKESVFHLLV*FLERSR
Trigger: CCTGCTTCTTTCCAGAAACCAAACTAGGAGATGAAA...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTACGCTGAGAACAGCCTaGATTGCAAGTCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTTLRTA*IASHWK
Trigger: TTTCCAGTGACTTGCAATCCAGGCTGTTCTCAGCGT...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTTTGTAGGAAGCACTTaGTACACTAGAGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SGFWALYLRRNLIALMTTFVGST*YTRGLP
Trigger: GGGCAAGCCTCTAGTGTACCAAGTGCTTCCTACAAA...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAGGGAGTAGAGGGACATaGAGATCATCTCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIGSRGT*RSSLHC
Trigger: GCAATGCAGAGATGATCTTCATGTCCCTCTACTCCC...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACTAGCTCTGTCTCACTaGACAGGTCCTGGCAATAAG +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVILALSH*TGPGNK
Trigger: CTTATTGCCAGGACCTGTTCAGTGAGACAGAGCTAG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTTCAAGAACAGTAGCCTaGAAGTCACACATGCTAACC +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFSRTVA*KSHMLT
Trigger: GGTTAGCATGTGTGACTTTCAGGCTACTGTTCTTGA...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAATTGCCTGGATCAGCTaGCTTAGCAAATGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIIAWIS*LSKCLL
Trigger: CAGCAGGCATTTGCTAAGGCAGCTGATCCAGGCAAT...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACCTCTGTGTAGCTTATaGCCTCCTTTAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIPLCSL*PPLAPP
Trigger: TGGTGGTGCTAAAGGAGGCCATAAGCTACACAGAGG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAACTGTTAGCTACACCTaGAAAACCCTTGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGTVSYT*KTLEFV
Trigger: CACGAACTCAAGGGTTTTCCAGGTGTAGCTAACAGT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CAA 72 bp CTGTTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTaGTATCTCAGGCGCAATCTTATTGCATTGATGACT +
Preference number: 4 (lower is better)
Translates to: LFSDAQRSGFWA*YLRRNLIALMT
Trigger: AGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAATCACAAGTTGCCACTaGATGGGACTTAACTTGGTT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGITSCH*MGLNLV
Trigger: AACCAAGTTAAGTCCCATTCAGTGGCAACTTGTGAT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGACTTCACTTCTTTTCTaGACATGTTGGGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVTSLLF*TCWGLI
Trigger: GATTAAGCCCCAACATGTTCAGAAAAGAAGTGAAGT...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR TCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAACTTCACTTCTTTTCTaGACATGTTGGGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKATSLLF*TCWGLI
Trigger: GATTAAGCCCCAACATGTTCAGAAAAGAAGTGAAGT...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACATGAAGATCATCTCTaGATTGCCCCGAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIHEDHL*IAPKEA
Trigger: TGCTTCCTTCGGGGCAATGCAGAGATGATCTTCATG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCAGGCGCAATCTTATTaGATTGATGACTACTTAGGG +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFQAQSY*IDDYLG
Trigger: CCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCAAGTTGCCACTGAATaGGACTTAACTTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFQVATE*DLTWFS
Trigger: GCTAAACCAAGTTAAGTCCCATTCAGTGGCAACTTG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAAATGTTGATGTGGAGTaGGGTATCTCACATAAAGCA +
Preference number: 4 (lower is better)
Translates to: GLAHPWNVDVEWGISHKANVDVE*GISHKA
Trigger: TGCTTTATGTGAGATACCCCACTCCACATCAACATT...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGAATAGTTTAACTTCTTaGCCAGCAGAACGATTGCCT +
Preference number: 4 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVNSLTS*PAERLP
Trigger: AGGCAATCGTTCTGCTGGCCAAGAAGTTAAACTATT...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAGAATGGGACTTAACTTaGTTTAGCACAACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGEWDLT*FSTTSE
Trigger: CTCAGAAGTTGTGCTAAACCAAGTTAAGTCCCATTC...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CCA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAAATAGTTTAACTTCTTaGCCAGCAGAACGATTGCCT +
Preference number: 4 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGNSLTS*PAERLP
Trigger: AGGCAATCGTTCTGCTGGCCAAGAAGTTAAACTATT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR GCA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAAAAGAAGCAGGCAAATaGAGTGACTGTCACAACTTG +
Preference number: 4 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIKEAGK*SDCHNL
Trigger: CAAGTTGTGACAGTCACTGCATTTGCCTGCTTCTTT...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CAA 72 bp AAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTaGCATTTTAGATTTGTCCTTTGGACCATTAAGAGA +
Preference number: 4 (lower is better)
Translates to: KQSCQAILHHRS*HFRFVLWTIKR
Trigger: TCTCTTAATGGTCCAAAGGACAAATCTAAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
3UTR CAA 72 bp GGAGAATGGATGGTCTCAAAGATAACCATTTTGGATTaGAGAGTTCACTTTGGGAACACTGAAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GEWMVSKITILD*RVHFGNTEKLS
Trigger: GGAAAGCTTTTCAGTGTTCCCAAAGTGAACTCTCAAATCCAAAATGGTTATCTTTGAGACCATCCATTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS GCA 90 bp CGCCAAGGCCAGCCCAGCAACCTGGGCGCTGGCGCCCCGCCTCGGTaGAGTGCCGGAGGCGGCGCCCACCAGGTCAAAGCAGCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: RQGQPSNLGAGAPPR*SAGGGAHQVKAAAN
Trigger: GTTCGCGGCTGCTTTGACCTGGTGGGCGCCGCCTCCGGCACTGCACCGAGGCGGGGCGCCAGCGCCCAGGTTGCTGGGCTGGCCTTGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306560.1
CDS GCA 90 bp AGGCCAGCCCAGCAACCTGGGCGCTGGCGCCCCGCCTCGGTGCAGTaGCGGAGGCGGCGCCCACCAGGTCAAAGCAGCCGCGAACGCACT +
Preference number: 5 (lower is better)
Translates to: RPAQQPGRWRPASVQ*RRRRPPGQSSRERT
Trigger: AGTGCGTTCGCGGCTGCTTTGACCTGGTGGGCGCCGCCTCCGGCACTGCACCGAGGCGGGGCGCCAGCGCCCAGGTTGCTGGGCTGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306560.1
CDS GCA 90 bp AGGTGCGCCCCGCGGCAGGGCCACACGCAGCGGCATGGAAACTTGTaGGCCCAACGGGGCTCCTCCTCTTGTGCCCGGCCGCCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: RCAPRQGHTQRHGNL*AQRGSSSCARPPSG
Trigger: CCCGGAGGGCGGCCGGGCACAAGAGGAGGAGCCCCGTTGGGCGCACAAGTTTCCATGCCGCTGCGTGTGGCCCTGCCGCGGGGCGCACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 90 bp CGCGGCCCGGCTAACCCGCAGGAACGTGGGCGCCTGGTACCTTGGTaGCCGGACAGGTGCAAACCCCCGGGAGGTCGTAGAAGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: RGPANPQERGRLVPW*PDRCKPPGGRRRCG
Trigger: CCCGCACCTTCTACGACCTCCCGGGGGTTTGCACCTGTCCGGGCACCAAGGTACCAGGCGCCCACGTTCCTGCGGGTTAGCCGGGCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS CCA 90 bp TGCCGCGGCCCGGCTAACCCGCAGGAACGTGGGCGCCTGGTACCTTaGTGCCCGGACAGGTGCAAACCCCCGGGAGGTCGTAGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: CRGPANPQERGRLVP*CPDRCKPPGGRRRC
Trigger: GCACCTTCTACGACCTCCCGGGGGTTTGCACCTGTCCGGGCACCAAGGTACCAGGCGCCCACGTTCCTGCGGGTTAGCCGGGCCGCGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS CCA 90 bp ACACGTGCTGCCGCGGCCCGGCTAACCCGCAGGAACGTGGGCGCCTaGTACCTTGGTGCCCGGACAGGTGCAAACCCCCGGGAGGTCGTA +
Preference number: 5 (lower is better)
Translates to: TRAAAARLTRRNVGA*YLGARTGANPREVV
Trigger: TACGACCTCCCGGGGGTTTGCACCTGTCCGGGCACCAAGGTACCAGGCGCCCACGTTCCTGCGGGTTAGCCGGGCCGCGGCAGCACGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 90 bp CTTGCGCAAGTAGTCAGGGTCCTCCTGGTATGCGGCAATGCACAGTaGCACCGAGCCCCGCCGCGGGGAGGGCAGCTTCAGGGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LAQVVRVLLVCGNAQ*HRAPPRGGQLQGLA
Trigger: GGCCAGGCCCTGAAGCTGCCCTCCCCGCGGCGGGGCTCGGTGGCACTGTGCATTGCCGCATACCAGGAGGACCCTGACTACTTGCGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS CCA 90 bp TGGCCCGCACCACATCCCGCACACGGTCCATGCCCTCCTGCAGGCTaGCCTCCGTCTCACCCTCGCCTGCCTCATGGAAGTTGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: WPAPHPAHGPCPPAG*PPSHPRLPHGSCCA
Trigger: GGCGCAGCAACTTCCATGAGGCAGGCGAGGGTGAGACGGAGGCCAGCCTGCAGGAGGGCATGGACCGTGTGCGGGATGTGGTGCGGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 90 bp GCAGGCTGGCCTCCGTCTCACCCTCGCCTGCCTCATGGAAGTTGCTaGGCCACACAAAGAAGCCGGCCTGCTCGGTGCCGCCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: AGWPPSHPRLPHGSC*ATQRSRPARCRPAP
Trigger: AGGTGCTGGGCGGCACCGAGCAGGCCGGCTTCTTTGTGTGGCGCAGCAACTTCCATGAGGCAGGCGAGGGTGAGACGGAGGCCAGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 90 bp CCTGCAGGCTGGCCTCCGTCTCACCCTCGCCTGCCTCATGGAAGTTaGTGCGCCACACAAAGAAGCCGGCCTGCTCGGTGCCGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PAGWPPSHPRLPHGS*CATQRSRPARCRPA
Trigger: TGCTGGGCGGCACCGAGCAGGCCGGCTTCTTTGTGTGGCGCAGCAACTTCCATGAGGCAGGCGAGGGTGAGACGGAGGCCAGCCTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 90 bp TGCACGAGAAGGTGCTGGCCCGCACCACATCCCGCACACGGTCCATaGCCTCCTGCAGGCTGGCCTCCGTCTCACCCTCGCCTGCCTCAT +
Preference number: 5 (lower is better)
Translates to: CTRRCWPAPHPAHGP*PPAGWPPSHPRLPH
Trigger: ATGAGGCAGGCGAGGGTGAGACGGAGGCCAGCCTGCAGGAGGGCATGGACCGTGTGCGGGATGTGGTGCGGGCCAGCACCTTCTCGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 90 bp AACTTTGAGGGGCTGCTGGTGTGCAGCGTCTCTCCCGCTGACAGGTaGGCCCCGCGGCAGGGCCACACGCAGCGGCATGGAAACTTGTGC +
Preference number: 5 (lower is better)
Translates to: NFEGLLVCSVSPADR*APRQGHTQRHGNLC
Trigger: GCACAAGTTTCCATGCCGCTGCGTGTGGCCCTGCCGCGGGGCGCACCTGTCAGCGGGAGAGACGCTGCACACCAGCAGCCCCTCAAAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 90 bp CACGCTTCTCCATCAAGCCTCCGAAACTTTGAGGGGCTGCTGGTGTaGAGCGTCTCTCCCGCTGACAGGTGCGCCCCGCGGCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: HASPSSLRNFEGLLV*SVSPADRCAPRQGH
Trigger: GTGGCCCTGCCGCGGGGCGCACCTGTCAGCGGGAGAGACGCTGCACACCAGCAGCCCCTCAAAGTTTCGGAGGCTTGATGGAGAAGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS CCA 90 bp ATGCCCTCCTGCAGGCTGGCCTCCGTCTCACCCTCGCCTGCCTCATaGAAGTTGCTGCGCCACACAAAGAAGCCGGCCTGCTCGGTGCCG +
Preference number: 5 (lower is better)
Translates to: MPSCRLASVSPSPAS*KLLRHTKKPACSVP
Trigger: CGGCACCGAGCAGGCCGGCTTCTTTGTGTGGCGCAGCAACTTCCATGAGGCAGGCGAGGGTGAGACGGAGGCCAGCCTGCAGGAGGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS CCA 90 bp GGACGCACGCTTCTCCATCAAGCCTCCGAAACTTTGAGGGGCTGCTaGTGTGCAGCGTCTCTCCCGCTGACAGGTGCGCCCCGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: GRTLLHQASETLRGC*CAASLPLTGAPRGR
Trigger: CCTGCCGCGGGGCGCACCTGTCAGCGGGAGAGACGCTGCACACCAGCAGCCCCTCAAAGTTTCGGAGGCTTGATGGAGAAGCGTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS TCA 90 bp CCGGCACGTCGCATGCGCCGGTGCTCCAGGAAGGCAAAAAGGCTCTaGATGAGCAGGTGCAGGCCCAGGATGGCGCCGTACAGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PARRMRRCSRKAKRL*MSRCRPRMAPYRPK
Trigger: CTTCGGCCTGTACGGCGCCATCCTGGGCCTGCACCTGCTCATTCAGAGCCTTTTTGCCTTCCTGGAGCACCGGCGCATGCGACGTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 90 bp CAAGGACGCACGCTTCTCCATCAAGCCTCCGAAACTTTGAGGGGCTaGTGGTGTGCAGCGTCTCTCCCGCTGACAGGTGCGCCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: QGRTLLHQASETLRG*WCAASLPLTGAPRG
Trigger: GCCGCGGGGCGCACCTGTCAGCGGGAGAGACGCTGCACACCAGCAGCCCCTCAAAGTTTCGGAGGCTTGATGGAGAAGCGTGCGTCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 90 bp GAACTGGTAGCCCGTCACATAGGCTGCCAGGATGCCACCCAGCACTaGCAGGGCAAACAGGCTGGTGCCCACCACACGCAGGGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: ELVARHIGCQDATQH*QGKQAGAHHTQGCR
Trigger: ACGACAGCCCTGCGTGTGGTGGGCACCAGCCTGTTTGCCCTGGCAGTGCTGGGTGGCATCCTGGCAGCCTATGTGACGGGCTACCAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 90 bp CCTCATGGAAGTTGCTGCGCCACACAAAGAAGCCGGCCTGCTCGGTaGCGCCCAGCACCTCGTGGAAGATGTCCAGCATGTAGGCGTCCT +
Preference number: 5 (lower is better)
Translates to: PHGSCCATQRSRPAR*RPAPRGRCPACRRP
Trigger: AGGACGCCTACATGCTGGACATCTTCCACGAGGTGCTGGGCGGCACCGAGCAGGCCGGCTTCTTTGTGTGGCGCAGCAACTTCCATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS-3UTR CAA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCGACTCCCCCTACTaGGGGATCCTCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LALLSAVHLSAGSARVSWPDSPY*GILLQD
Trigger: GTCCTGGAGGAGGATCCCCAAGTAGGGGGAGTCGGG...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCAGGCTCAGGACTCGGTaGGTGAGGTGCCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLRLRTR*VRCRSS
Trigger: GGATGACCGGCACCTCACCAACCGAGTCCTGAGCCT...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCCTTGCTCCAGCGGGTTaGCTGGTTGAGCCACCGGAG +
Preference number: 5 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLLAPAG*LVEPPE
Trigger: CTCCGGTGGCTCAACCAGCAAACCCGCTGGAGCAAG...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS TCA 90 bp TGGCGCCGTACAGGCCGAAGGACAGGTAGTGCTTTTCCGTGTGGATaGACTGGTAGCCCGTCACATAGGCTGCCAGGATGCCACCCAGCA +
Preference number: 5 (lower is better)
Translates to: WRRTGRRTGSAFPCG*TGSPSHRLPGCHPA
Trigger: TGCTGGGTGGCATCCTGGCAGCCTATGTGACGGGCTACCAGTTCATCCACACGGAAAAGCACTACCTGTCCTTCGGCCTGTACGGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS CCA 90 bp CTCCCCCTACTTGGGGATCCTCCTCCAGGACTCGAAGCATCTCGATaGTGCAGGCTGGATCCAGCACAGTGTCAGAGTCGCACACCTGGA +
Preference number: 5 (lower is better)
Translates to: LPLLGDPPPGLEASR*CRLDPAQCQSRTPG
Trigger: TCCAGGTGTGCGACTCTGACACTGTGCTGGATCCAGCCTGCACCATCGAGATGCTTCGAGTCCTGGAGGAGGATCCCCAAGTAGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 90 bp CCCCTACTTGGGGATCCTCCTCCAGGACTCGAAGCATCTCGATGGTaGAGGCTGGATCCAGCACAGTGTCAGAGTCGCACACCTGGATGT +
Preference number: 5 (lower is better)
Translates to: PLLGDPPPGLEASRW*RLDPAQCQSRTPGC
Trigger: ACATCCAGGTGTGCGACTCTGACACTGTGCTGGATCCAGCCTGCACCATCGAGATGCTTCGAGTCCTGGAGGAGGATCCCCAAGTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS-3UTR CAA 90 bp GGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTTGCCACTTGCTCCAGCGGGTTaGCTGGTTGAGCCACCGGAG +
Preference number: 5 (lower is better)
Translates to: GEPPSAGCRHSGTYHKLPLAPAG*LVEPPE
Trigger: CTCCGGTGGCTCAACCAGCAAACCCGCTGGAGCAAG...TGGCAACTTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS CCA 90 bp TTGGGGATCCTCCTCCAGGACTCGAAGCATCTCGATGGTGCAGGCTaGATCCAGCACAGTGTCAGAGTCGCACACCTGGATGTAGTCCAC +
Preference number: 5 (lower is better)
Translates to: LGILLQDSKHLDGAG*IQHSVRVAHLDVVH
Trigger: GTGGACTACATCCAGGTGTGCGACTCTGACACTGTGCTGGATCCAGCCTGCACCATCGAGATGCTTCGAGTCCTGGAGGAGGATCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS CCA 90 bp TCGTACTTGTTGAGGATCTGGACATCTCCCCCGACTCCCCCTACTTaGGGATCCTCCTCCAGGACTCGAAGCATCTCGATGGTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: SYLLRIWTSPPTPPT*GSSSRTRSISMVQA
Trigger: AGCCTGCACCATCGAGATGCTTCGAGTCCTGGAGGAGGATCCCCAAGTAGGGGGAGTCGGGGGAGATGTCCAGATCCTCAACAAGTACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 90 bp CAGGTCCTGGCAATAAGCTGTGTAGGCCAGCCCTCCCAGGAGAACTaGCACCCAGATGGACACAGGAATGAGGCCAATGAAGTTCACCAC +
Preference number: 5 (lower is better)
Translates to: QVLAISCVGQPSQEN*HPDGHRNEANEVHH
Trigger: GTGGTGAACTTCATTGGCCTCATTCCTGTGTCCATCTGGGTGGCAGTTCTCCTGGGAGGGCTGGCCTACACAGCTTATTGCCAGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGACCACCATGACCACCTaGAGGTCAGGGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: LALLSAVHLSAGSARVSWTTMTT*RSGKEM
Trigger: CATCTCCTTCCCTGACCTCAAGGTGGTCATGGTGGT...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAACCTGCCTCATGGAAGTaGCTGCGCCACACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQPASWK*LRHTKK
Trigger: CTTCTTTGTGTGGCGCAGCAACTTCCATGAGGCAGG...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCAGGCTCAGGACTCGGTaGGTGAGGTGCCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: KNSSLKVTHANPAAKESVRLRTR*VRCRSS
Trigger: GGATGACCGGCACCTCACCAACCGAGTCCTGAGCCT...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGACAGCGGGTTTGCTGGTaGAGCCACCGGAGGTACTTA +
Preference number: 5 (lower is better)
Translates to: TGPARSVEILLPPLVVFRQRVCW*SHRRYL
Trigger: TAAGTACCTCCGGTGGCTCAACCAGCAAACCCGCTG...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAAAGATCATCTCTGCATaGCCCCGAAGGAAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQKIISA*PRRKQA
Trigger: CGCCTGCTTCCTTCGGGGCAATGCAGAGATGATCTT...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCCTTTACCCGCTCTGCTaGGGGGCCATGTCACACCTC +
Preference number: 5 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGLYPLC*GAMSHL
Trigger: GAGGTGTGACATGGCCCCCAAGCAGAGCGGGTAAAG...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAATGGCCAGCAGAACGATaGCCTGGATCAGCTGCCTTA +
Preference number: 5 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQWPAER*PGSAAL
Trigger: TAAGGCAGCTGATCCAGGCAATCGTTCTGCTGGCCA...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGTGCCCCAGCCAGATTaGTTGATGGTAGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQVPQPD*LMVAMA
Trigger: TGCCATTGCTACCATCAACAAATCTGGCTGGGGCAC...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGATCCTGCCACCTCTGGTaGTGTTCAGATGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRSCHLW*CSDGLG
Trigger: TCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGA...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCTACATGACCTCGCGCTaGCCTCCCCACTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: KNSSLKVTHANPAAKESVYMTSR*PPHFCM
Trigger: CATGCAGAAGTGGGGAGGCAAGCGCGAGGTCATGTA...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTCCCGACTCCCCCTACTaGGGGATCCTCCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: SGFWALYLRRNLIALMTTPDSPY*GILLQD
Trigger: GTCCTGGAGGAGGATCCCCAAGTAGGGGGAGTCGGG...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCTCCCTCCCTTACCCATaGCACTTTACCCGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGSLPYP*HFTRSA
Trigger: AGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGGA...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAATGCCTGCTGCCTTCCAGCCTTCATGGGTTGGGTCTGATGTCAACCAGCAGTTCCAGCCTTCATGGGTaGGGTCTGATGTCAACCAGC +
Preference number: 5 (lower is better)
Translates to: KCLLPSSLHGLGLMSTSSSSLHG*GLMSTS
Trigger: GCTGGTTGACATCAGACCCAACCCATGAAGGCTGGA...ACTGCTGGTTGACATCAGACCCAACCCATGAAGGCTGGAAGGCAGCAGGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGATCCAGCCTTCATGGGTaGGGTCTGATGTCAACCAGC +
Preference number: 5 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRSSLHG*GLMSTS
Trigger: GCTGGTTGACATCAGACCCAACCCATGAAGGCTGGA...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCGTCTCTGTGAGGCACTaGGAGCGCGCGGTATACTTA +
Preference number: 5 (lower is better)
Translates to: KNSSLKVTHANPAAKESVVSVRH*ERAVYL
Trigger: TAAGTATACCGCGCGCTCCAAGTGCCTCACAGAGAC...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCGTGCCCCAGCCAGATTaGTTGATGGTAGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGVPQPD*LMVAMA
Trigger: TGCCATTGCTACCATCAACAAATCTGGCTGGGGCAC...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCTCCCTCCCTTACCCATaGCACTTTACCCGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: KNSSLKVTHANPAAKESVSLPYP*HFTRSA
Trigger: AGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGGA...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGATCTGGGGGATCAGTGTaGCCTCCTCTAAACAGAGCT +
Preference number: 5 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRSGGSV*PPLNRA
Trigger: AGCTCTGTTTAGAGGAGGCAACACTGATCCCCCAGA...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGCCCCTCACCACCACAATCTCTTaGTTCCTCCTGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: LLSAVHLSAGSARVSWPLTTTIS*FLLANF
Trigger: AAAGTTTGCCAGGAGGAACAAAGAGATTGTGGTGGT...GAGGGGCCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAGCCCCAATTGCCACCTaGAAAACCTTACCTATGATG +
Preference number: 5 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQAPIAT*KTLPMM
Trigger: CATCATAGGTAAGGTTTTCAAGGTGGCAATTGGGGC...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CTTGCCCTCTTGTCTGCTGTCCACCTTAGTGCTGGTTCTGCACGGGTTAGCTGGGCCCCAATTGCCACCTaGAAAACCTTACCTATGATG +
Preference number: 5 (lower is better)
Translates to: LALLSAVHLSAGSARVSWAPIAT*KTLPMM
Trigger: CATCATAGGTAAGGTTTTCAAGGTGGCAATTGGGGC...CCAGCTAACCCGTGCAGAACCAGCACTAAGGTGGACAGCAGACAAGAGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAAGTGACTGTCACAACTaGGCTGTAAGAATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQSDCHN*AVRIPW
Trigger: CCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACT...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACACCACCATGACCACCTaGAGGTCAGGGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHTTMTT*RSGKEM
Trigger: CATCTCCTTCCCTGACCTCAAGGTGGTCATGGTGGT...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGACTTTACCCGCTCTGCTaGGGGGCCATGTCACACCTC +
Preference number: 5 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGLYPLC*GAMSHL
Trigger: GAGGTGTGACATGGCCCCCAAGCAGAGCGGGTAAAG...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAACCTCCTTCCGCAGGTaGCCGTCACTCAGGTACCTA +
Preference number: 5 (lower is better)
Translates to: GLAHPWNVDVEWGISHKATSFRR*PSLRYL
Trigger: TAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGT...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTTCCTGCCACCTCTGGTaGTGTTCAGATGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLSCHLW*CSDGLG
Trigger: TCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGA...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCCTCATCCCTGGAATGTaGATGTGGAGTGGGGTATCT +
Preference number: 5 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGLIPGM*MWSGVS
Trigger: AGATACCCCACTCCACATCAACATTCCAGGGATGAG...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TGGGCTGGGAGAACCTCCTTCCGCAGGTTGCCGTCACTCAGGTACCTATCACAAACCACCACAATCTCTTaGTTCCTCCTGGCAAACTTT +
Preference number: 5 (lower is better)
Translates to: WAGRTSFRRLPSLRYLSQTTTIS*FLLANF
Trigger: AAAGTTTGCCAGGAGGAACAAAGAGATTGTGGTGGT...TTGTGATAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGTTCTCCCAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGAGTGCTGAGAACACGCTaGCCTCCTGCTGAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRVLRTR*PPAEAS
Trigger: AGAAGCTTCAGCAGGAGGCAAGCGTGTTCTCAGCAC...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp ACCGGCCCAGCTCGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGAAGTGACTGTCACAACTaGGCTGTAAGAATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: TGPARSVEILLPPLVVFRSDCHN*AVRIPW
Trigger: CCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACT...TCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCGAGCTGGGCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGGAAAGCACCAGGGTTaGCCCATCTGTGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAGKHQG*PICGSE
Trigger: CTCTGAGCCACAGATGGGCAAACCCTGGTGCTTTCC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCACACCTGGAAAACCCTaGAGTTCGTGGGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGTPGKP*SSWEMK
Trigger: CTTCATCTCCCACGAACTCAAGGGTTTTCCAGGTGT...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGTCTCTGTGAGGCACTaGGAGCGCGCGGTATACTTA +
Preference number: 5 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAVSVRH*ERAVYL
Trigger: TAAGTATACCGCGCGCTCCAAGTGCCTCACAGAGAC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCAGCGGGTTTGCTGGTaGAGCCACCGGAGGTACTTA +
Preference number: 5 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFQRVCW*SHRRYL
Trigger: TAAGTACCTCCGGTGGCTCAACCAGCAAACCCGCTG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGATCTGGGGGATCAGTGTaGCCTCCTCTAAACAGAGCT +
Preference number: 5 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRSGGSV*PPLNRA
Trigger: AGCTCTGTTTAGAGGAGGCAACACTGATCCCCCAGA...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCAGTGCTGAGAACACGCTaGCCTCCTGCTGAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GLAHPWNVDVEWGISHKAVLRTR*PPAEAS
Trigger: AGAAGCTTCAGCAGGAGGCAAGCGTGTTCTCAGCAC...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAGGAAAGCACCAGGGTTaGCCCATCTGTGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGGKHQG*PICGSE
Trigger: CTCTGAGCCACAGATGGGCAAACCCTGGTGCTTTCC...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCCTGCCTCATGGAAGTaGCTGCGCCACACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFPASWK*LRHTKK
Trigger: CTTCTTTGTGTGGCGCAGCAACTTCCATGAGGCAGG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GTGGCTCAGAGCACACCTTGCGTCTTTGTAGGAAGCACTTGGTACACTAGAGGCATCCATGAGTCGTACTaGTTGAGGATCTGGACATCT +
Preference number: 5 (lower is better)
Translates to: VAQSTPCVFVGSTWYTRGIHESY*LRIWTS
Trigger: AGATGTCCAGATCCTCAACAAGTACGACTCATGGAT...GCCTCTAGTGTACCAAGTGCTTCCTACAAAGACGCAAGGTGTGCTCTGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAAGTGAAGTGGGGAGTGTGTCTTAGCCTCAGATCAGAGCTGAATTTGAGAGGAAAGATCATCTCTGCATaGCCCCGAAGGAAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: KVKWGVCLSLRSELNLRGKIISA*PRRKQA
Trigger: CGCCTGCTTCCTTCGGGGCAATGCAGAGATGATCTT...TCCTCTCAAATTCAGCTCTGATCTGAGGCTAAGACACACTCCCCACTTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCCCCAGCCAGATTTGTaGATGGTAGCAATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHPQPDL*MVAMAK
Trigger: CTTTGCCATTGCTACCATCAACAAATCTGGCTGGGG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAACCTCCTTCCGCAGGTaGCCGTCACTCAGGTACCTA +
Preference number: 5 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVITSFRR*PSLRYL
Trigger: TAGGTACCTGAGTGACGGCAACCTGCGGAAGGAGGT...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CGCTCAGTAGAAATTCTCCTGCCACCTCTGGTTGTGTTCAGATGGGCTGGGAGAGTTTCATCTCCTAGTTaGGTTTCTGGAAAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RSVEILLPPLVVFRWAGRVSSPS*VSGKKQ
Trigger: CTGCTTCTTTCCAGAAACCAAACTAGGAGATGAAAC...TCTCCCAGCCCATCTGAACACAACCAGAGGTGGCAGGAGAATTTCTACTGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TTTTCTGATGCCCAAAGATCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTACACCTGGAAAACCCTaGAGTTCGTGGGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: FSDAQRSGFWALYLRRNLTPGKP*SSWEMK
Trigger: CTTCATCTCCCACGAACTCAAGGGTTTTCCAGGTGT...AAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGATCTTTGGGCATCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCCCCAGCCAGATTTGTaGATGGTAGCAATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFPQPDL*MVAMAK
Trigger: CTTTGCCATTGCTACCATCAACAAATCTGGCTGGGG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GCCTCCTCTAAACAGAGCTGTCAGGCCATACTACATCACCGTTCTTTGCATTTTCTCATCCCTGGAATGTaGATGTGGAGTGGGGTATCT +
Preference number: 5 (lower is better)
Translates to: ASSKQSCQAILHHRSLHFLIPGM*MWSGVS
Trigger: AGATACCCCACTCCACATCAACATTCCAGGGATGAG...AAAATGCAAAGAACGGTGATGTAGTATGGCCTGACAGCTCTGTTTAGAGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATATGGCCAGCAGAACGATaGCCTGGATCAGCTGCCTTA +
Preference number: 5 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIWPAER*PGSAAL
Trigger: TAAGGCAGCTGATCCAGGCAATCGTTCTGCTGGCCA...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGCTGCCAAGGAATCCGTCCAAGCAGCTCCAAGATTGTAGCCAATTTGATCAGACTGCCTGTTTTTGATTaGAGGAAAGTTGACGACCAC +
Preference number: 5 (lower is better)
Translates to: GCQGIRPSSSKIVANLIRLPVFD*RKVDDH
Trigger: GTGGTCGTCAACTTTCCTCAAATCAAAAACAGGCAG...TCTGATCAAATTGGCTACAATCTTGGAGCTGCTTGGACGGATTCCTTGGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp AAGAACAGTAGCCTGAAAGTCACACATGCTAACCCGGCTGCCAAGGAATCCGTCATAACCATTTTGGATTaGAGAGTTCACTTTGGGAAC +
Preference number: 5 (lower is better)
Translates to: KNSSLKVTHANPAAKESVITILD*RVHFGN
Trigger: GTTCCCAAAGTGAACTCTCAAATCCAAAATGGTTAT...GACGGATTCCTTGGCAGCCGGGTTAGCATGTGTGACTTTCAGGCTACTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGGTTTCATCTCCTAGTTaGGTTTCTGGAAAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVVSSPS*VSGKKQ
Trigger: CTGCTTCTTTCCAGAAACCAAACTAGGAGATGAAAC...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGCAAATGCAGTGACTGTCACAACTTGGCTGTAAGAATTCCCTGGAGAAGCCACCTACATCACCGTTCTTaGCATTTTAGATTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GKCSDCHNLAVRIPWRSHLHHRS*HFRFVL
Trigger: AAGGACAAATCTAAAATGCAAAGAACGGTGATGTAG...GTGGCTTCTCCAGGGAATTCTTACAGCCAAGTTGTGACAGTCACTGCATTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACTGAAAAGCTTTCCATaGGAGATGATTGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: GLAHPWNVDVEWGISHKALKSFP*EMIVKN
Trigger: GTTCTTGACAATCATCTCCAATGGAAAGCTTTTCAG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp CTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTTAGGGGTGCTGAAAAGCTTTCCATaGGAGATGATTGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: LGLVSQAQSYCIDDYLGVLKSFP*EMIVKN
Trigger: GTTCTTGACAATCATCTCCAATGGAAAGCTTTTCAG...CACCCCTAAGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATAATCCATGAGTCGTACTaGTTGAGGATCTGGACATCT +
Preference number: 5 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVIIHESY*LRIWTS
Trigger: AGATGTCCAGATCCTCAACAAGTACGACTCATGGAT...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp GGTTTGGCTCATCCCTGGAATGTTGATGTGGAGTGGGGTATCTCACATAAAGCACTACATCACCGTTCTTaGCATTTTAGATTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GLAHPWNVDVEWGISHKALHHRS*HFRFVL
Trigger: AAGGACAAATCTAAAATGCAAAGAACGGTGATGTAG...TGCTTTATGTGAGATACCCCACTCCACATCAACATTCCAGGGATGAGCCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp ACCTTGAAAACCTTACCTATGATGATGAGGGTAGAAGAGGTGACTGCAGTGATACTGCCTGTTTTTGATTaGAGGAAAGTTGACGACCAC +
Preference number: 5 (lower is better)
Translates to: TLKTLPMMMRVEEVTAVILPVFD*RKVDDH
Trigger: GTGGTCGTCAACTTTCCTCAAATCAAAAACAGGCAG...TATCACTGCAGTCACCTCTTCTACCCTCATCATCATAGGTAAGGTTTTCAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS-3UTR CAA 90 bp TCAGGCTTCTGGGCCTTGTATCTCAGGCGCAATCTTATTGCATTGATGACTACTATAACCATTTTGGATTaGAGAGTTCACTTTGGGAAC +
Preference number: 5 (lower is better)
Translates to: SGFWALYLRRNLIALMTTITILD*RVHFGN
Trigger: GTTCCCAAAGTGAACTCTCAAATCCAAAATGGTTAT...AGTAGTCATCAATGCAATAAGATTGCGCCTGAGATACAAGGCCCAGAAGCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS CCA 72 bp AAGGGGGCGCCAAGGCCAGCCCAGCAACCTGGGCGCTaGCGCCCCGCCTCGGTGCAGTGCCGGAGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: KGAPRPAQQPGR*RPASVQCRRRR
Trigger: GCGCCGCCTCCGGCACTGCACCGAGGCGGGGCGCCAGCGCCCAGGTTGCTGGGCTGGCCTTGGCGCCCCCTT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306560.1
CDS GCA 72 bp CAGCAACCTGGGCGCTGGCGCCCCGCCTCGGTGCAGTaGCGGAGGCGGCGCCCACCAGGTCAAAGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: QQPGRWRPASVQ*RRRRPPGQSSR
Trigger: GCGGCTGCTTTGACCTGGTGGGCGCCGCCTCCGGCACTGCACCGAGGCGGGGCGCCAGCGCCCAGGTTGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306560.1
CDS CCA 72 bp ACCGAGCCCCGCCGCGGGGAGGGCAGCTTCAGGGCCTaGCCGGCACGTCGCATGCGCCGGTGCTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: TEPRRGEGSFRA*PARRMRRCSRK
Trigger: CTTCCTGGAGCACCGGCGCATGCGACGTGCCGGCCAGGCCCTGAAGCTGCCCTCCCCGCGGCGGGGCTCGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 72 bp CAGCCCAGCAACCTGGGCGCTGGCGCCCCGCCTCGGTaGAGTGCCGGAGGCGGCGCCCACCAGGTCAAAGCA +
Preference number: 6 (lower is better)
Translates to: QPSNLGAGAPPR*SAGGGAHQVKA
Trigger: TGCTTTGACCTGGTGGGCGCCGCCTCCGGCACTGCACCGAGGCGGGGCGCCAGCGCCCAGGTTGCTGGGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306560.1
CDS CCA 72 bp GCCGCGGCCCGGCTAACCCGCAGGAACGTGGGCGCCTaGTACCTTGGTGCCCGGACAGGTGCAAACCCCCGG +
Preference number: 6 (lower is better)
Translates to: AAARLTRRNVGA*YLGARTGANPR
Trigger: CCGGGGGTTTGCACCTGTCCGGGCACCAAGGTACCAGGCGCCCACGTTCCTGCGGGTTAGCCGGGCCGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS CAA 90 bp GACAGGTGCGCCCCGCGGCAGGGCCACACGCAGCGGCATGGAAACTaGTGCGCCCAACGGGGCTCCTCCTCTTGTGCCCGGCCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: DRCAPRQGHTQRHGN*CAQRGSSSCARPPS
Trigger: GGAGGGCGGCCGGGCACAAGAGGAGGAGCCCCGTTGGGCGCACAAGTTTCCATGCCGCTGCGTGTGGCCCTGCCGCGGGGCGCACCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 72 bp CCGCGGCAGGGCCACACGCAGCGGCATGGAAACTTGTaGGCCCAACGGGGCTCCTCCTCTTGTGCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: PRQGHTQRHGNL*AQRGSSSCARP
Trigger: CGGCCGGGCACAAGAGGAGGAGCCCCGTTGGGCGCACAAGTTTCCATGCCGCTGCGTGTGGCCCTGCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS CAA 72 bp GCCCCGCGGCAGGGCCACACGCAGCGGCATGGAAACTaGTGCGCCCAACGGGGCTCCTCCTCTTGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: APRQGHTQRHGN*CAQRGSSSCAR
Trigger: CCGGGCACAAGAGGAGGAGCCCCGTTGGGCGCACAAGTTTCCATGCCGCTGCGTGTGGCCCTGCCGCGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 72 bp AGGTGCTGGCCCGCACCACATCCCGCACACGGTCCATaGCCTCCTGCAGGCTGGCCTCCGTCTCACCCTCGC +
Preference number: 6 (lower is better)
Translates to: RCWPAPHPAHGP*PPAGWPPSHPR
Trigger: GCGAGGGTGAGACGGAGGCCAGCCTGCAGGAGGGCATGGACCGTGTGCGGGATGTGGTGCGGGCCAGCACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS CCA 72 bp CAGGTGCGCCCCGCGGCAGGGCCACACGCAGCGGCATaGAAACTTGTGCGCCCAACGGGGCTCCTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: QVRPAAGPHAAA*KLVRPTGLLLL
Trigger: CAAGAGGAGGAGCCCCGTTGGGCGCACAAGTTTCCATGCCGCTGCGTGTGGCCCTGCCGCGGGGCGCACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS CAA 90 bp TCCTGCAGGCTGGCCTCCGTCTCACCCTCGCCTGCCTCATGGAAGTaGCTGCGCCACACAAAGAAGCCGGCCTGCTCGGTGCCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SCRLASVSPSPASWK*LRHTKKPACSVPPS
Trigger: GCTGGGCGGCACCGAGCAGGCCGGCTTCTTTGTGTGGCGCAGCAACTTCCATGAGGCAGGCGAGGGTGAGACGGAGGCCAGCCTGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 72 bp GTAGTCAGGGTCCTCCTGGTATGCGGCAATGCACAGTaGCACCGAGCCCCGCCGCGGGGAGGGCAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: VVRVLLVCGNAQ*HRAPPRGGQLQ
Trigger: CTGAAGCTGCCCTCCCCGCGGCGGGGCTCGGTGGCACTGTGCATTGCCGCATACCAGGAGGACCCTGACTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 72 bp GCCCGTCACATAGGCTGCCAGGATGCCACCCAGCACTaGCAGGGCAAACAGGCTGGTGCCCACCACACGCAG +
Preference number: 6 (lower is better)
Translates to: ARHIGCQDATQH*QGKQAGAHHTQ
Trigger: CTGCGTGTGGTGGGCACCAGCCTGTTTGCCCTGGCAGTGCTGGGTGGCATCCTGGCAGCCTATGTGACGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 72 bp TCGTCAGCTGCACCGGCATCTTGGTGCCCGGACAGGTaGAAACCCCCGGGAGGTCGTAGAAGGTGCGGGGGA +
Preference number: 6 (lower is better)
Translates to: SSAAPASWCPDR*KPPGGRRRCGG
Trigger: TCCCCCGCACCTTCTACGACCTCCCGGGGGTTTGCACCTGTCCGGGCACCAAGATGCCGGTGCAGCTGACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566118.5
CDS GCA 72 bp CCATCAAGCCTCCGAAACTTTGAGGGGCTGCTGGTGTaGAGCGTCTCTCCCGCTGACAGGTGCGCCCCGCGG +
Preference number: 6 (lower is better)
Translates to: PSSLRNFEGLLV*SVSPADRCAPR
Trigger: CCGCGGGGCGCACCTGTCAGCGGGAGAGACGCTGCACACCAGCAGCCCCTCAAAGTTTCGGAGGCTTGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS CCA 72 bp CCAGGATGCCACCCAGCACTGCCAGGGCAAACAGGCTaGTGCCCACCACACGCAGGGCTGTCGTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PGCHPALPGQTG*CPPHAGLSSAA
Trigger: TGCAGCTGACGACAGCCCTGCGTGTGGTGGGCACCAGCCTGTTTGCCCTGGCAGTGCTGGGTGGCATCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS TCA 72 bp CGCATGCGCCGGTGCTCCAGGAAGGCAAAAAGGCTCTaGATGAGCAGGTGCAGGCCCAGGATGGCGCCGTAC +
Preference number: 6 (lower is better)
Translates to: RMRRCSRKAKRL*MSRCRPRMAPY
Trigger: GTACGGCGCCATCCTGGGCCTGCACCTGCTCATTCAGAGCCTTTTTGCCTTCCTGGAGCACCGGCGCATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS CAA 90 bp ACCCCCAGTCAAGGACGCACGCTTCTCCATCAAGCCTCCGAAACTTaGAGGGGCTGCTGGTGTGCAGCGTCTCTCCCGCTGACAGGTGCG +
Preference number: 6 (lower is better)
Translates to: TPSQGRTLLHQASET*RGCWCAASLPLTGA
Trigger: CGCACCTGTCAGCGGGAGAGACGCTGCACACCAGCAGCCCCTCAAAGTTTCGGAGGCTTGATGGAGAAGCGTGCGTCCTTGACTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 72 bp AGTTGCTGCGCCACACAAAGAAGCCGGCCTGCTCGGTaGCGCCCAGCACCTCGTGGAAGATGTCCAGCATGT +
Preference number: 6 (lower is better)
Translates to: SCCATQRSRPAR*RPAPRGRCPAC
Trigger: ACATGCTGGACATCTTCCACGAGGTGCTGGGCGGCACCGAGCAGGCCGGCTTCTTTGTGTGGCGCAGCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS CCA 72 bp CTTCTCCATCAAGCCTCCGAAACTTTGAGGGGCTGCTaGTGTGCAGCGTCTCTCCCGCTGACAGGTGCGCCC +
Preference number: 6 (lower is better)
Translates to: LLHQASETLRGC*CAASLPLTGAP
Trigger: GGGCGCACCTGTCAGCGGGAGAGACGCTGCACACCAGCAGCCCCTCAAAGTTTCGGAGGCTTGATGGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 72 bp ACGCTTCTCCATCAAGCCTCCGAAACTTTGAGGGGCTaGTGGTGTGCAGCGTCTCTCCCGCTGACAGGTGCG +
Preference number: 6 (lower is better)
Translates to: TLLHQASETLRG*WCAASLPLTGA
Trigger: CGCACCTGTCAGCGGGAGAGACGCTGCACACCAGCAGCCCCTCAAAGTTTCGGAGGCTTGATGGAGAAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568321.1
CDS GCA 72 bp GGGGATCCTCCTCCAGGACTCGAAGCATCTCGATGGTaGAGGCTGGATCCAGCACAGTGTCAGAGTCGCACA +
Preference number: 6 (lower is better)
Translates to: GDPPPGLEASRW*RLDPAQCQSRT
Trigger: TGTGCGACTCTGACACTGTGCTGGATCCAGCCTGCACCATCGAGATGCTTCGAGTCCTGGAGGAGGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS GCA 72 bp GGGCCATGTCACACCTCAGCAAAAGCCAAGCTGTACTaGTCCGGCTTCTTCCCACATCGCCGGGCGATGATG +
Preference number: 6 (lower is better)
Translates to: GPCHTSAKAKLY*SGFFPHRRAMM
Trigger: CATCATCGCCCGGCGATGTGGGAAGAAGCCGGAGCAGTACAGCTTGGCTTTTGCTGAGGTGTGACATGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS CCA 72 bp CTTGGGGATCCTCCTCCAGGACTCGAAGCATCTCGATaGTGCAGGCTGGATCCAGCACAGTGTCAGAGTCGC +
Preference number: 6 (lower is better)
Translates to: LGDPPPGLEASR*CRLDPAQCQSR
Trigger: GCGACTCTGACACTGTGCTGGATCCAGCCTGCACCATCGAGATGCTTCGAGTCCTGGAGGAGGATCCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS CCA 72 bp CTCCTCCAGGACTCGAAGCATCTCGATGGTGCAGGCTaGATCCAGCACAGTGTCAGAGTCGCACACCTGGAT +
Preference number: 6 (lower is better)
Translates to: LLQDSKHLDGAG*IQHSVRVAHLD
Trigger: ATCCAGGTGTGCGACTCTGACACTGTGCTGGATCCAGCCTGCACCATCGAGATGCTTCGAGTCCTGGAGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS TCA 72 bp ACAGGCCGAAGGACAGGTAGTGCTTTTCCGTGTGGATaGACTGGTAGCCCGTCACATAGGCTGCCAGGATGC +
Preference number: 6 (lower is better)
Translates to: TGRRTGSAFPCG*TGSPSHRLPGC
Trigger: GCATCCTGGCAGCCTATGTGACGGGCTACCAGTTCATCCACACGGAAAAGCACTACCTGTCCTTCGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219322.7
ENST00000306560.1
ENST00000566118.5
ENST00000569188.6
CDS TCA 72 bp TCATCCCCGAAGCTGCACTTGCTGCCTAGGAACTTCTaGTGGTACCAGTCCTCCAGGAACTGCTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SSPKLHLLPRNF*WYQSSRNCWRR
Trigger: CCTCCTCCAGCAGTTCCTGGAGGACTGGTACCATCAGAAGTTCCTAGGCAGCAAGTGCAGCTTCGGGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS GCA 72 bp CCCTTCCCTCCCTTACCCATTGCACTTTACCCGCTCTaGTTGGGGGCCATGTCACACCTCAGCAAAAGCCAA +
Preference number: 6 (lower is better)
Translates to: PFPPLPIALYPL*LGAMSHLSKSQ
Trigger: TTGGCTTTTGCTGAGGTGTGACATGGCCCCCAAGCAGAGCGGGTAAAGTGCAATGGGTAAGGGAGGGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS GCA 72 bp GCAATAAGCTGTGTAGGCCAGCCCTCCCAGGAGAACTaGCACCCAGATGGACACAGGAATGAGGCCAATGAA +
Preference number: 6 (lower is better)
Translates to: AISCVGQPSQEN*HPDGHRNEANE
Trigger: TTCATTGGCCTCATTCCTGTGTCCATCTGGGTGGCAGTTCTCCTGGGAGGGCTGGCCTACACAGCTTATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6
CDS GCA 72 bp ATAGAGGAGGGAGTAGAGGGACATGAAGATCATCTCTaGATTGCCCCGAAGGAAGCAGGCGTAGGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: IEEGVEGHEDHL*IAPKEAGVGGL
Trigger: AAGGCCACCTACGCCTGCTTCCTTCGGGGCAATGCAGAGATGATCTTCATGTCCCTCTACTCCCTCCTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306560.1
ENST00000569188.6