RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105509

Ensembl transcript IDs: ENST00000222115.5, ENST00000540069.7, ENST00000594621.1, ENST00000601667.5, ENST00000601714.5

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGAGGTGTACCCGACCACCTGGTCCCC +
Preference number: 1 (lower is better)
Translates to: ACLLAQPPQEGRGRL*VAAGPGGVPDHLVP
Trigger: GGGGACCAGGTGGTCGGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
3UTR TCA 90 bp GGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTaGCCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCA +
Preference number: 1 (lower is better)
Translates to: GESRTLSLHSSDPTP*PINTLPGDPEVPVP
Trigger: TGGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR GCA 90 bp ACGACTTGGACCAGCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAGGGCGGTCATCCACGCATGGTaGCGGTGCCACCAGAGCGCG +
Preference number: 2 (lower is better)
Translates to: TTWTSVSAGSATAGRTRAVIHAW*RCHQSA
Trigger: CGCGCTCTGGTGGCACCGGCACCATGCGTGGATGAC...CGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
3UTR-3UTR GCA 90 bp AGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTCACGCATGGTGCCGGTaGCACCAGAGCGCGTTGTAC +
Preference number: 2 (lower is better)
Translates to: RPPPRRSSTHGAGATRARHAWCR*HQSALY
Trigger: GTACAACGCGCTCTGGTGGCACCGGCACCATGCGTG...ACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
3UTR-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCACCCAGCAAGTTCGTaGCTCGGGGCCCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDHPASS*LGAQQL
Trigger: GAGCTGCTGGGCCCCGAGCCACGAACTTGCTGGGTG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR CCA 90 bp GAAGTACGACTTGGACCAGCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAAGTAGCAGCGGGACCTaGAGGTGTACCCGACCACCT +
Preference number: 2 (lower is better)
Translates to: EVRLGPACLLAQPPQEGRSSSGT*RCTRPP
Trigger: AGGTGGTCGGGTACACCTCCAGGTCCCGCTGCTACT...TCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGTACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
3UTR-3UTR CCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCCACCCAGCAAGTTCGTaGCTCGGGGCCCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPHPASS*LGAQQL
Trigger: GAGCTGCTGGGCCCCGAGCCACGAACTTGCTGGGTG...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR TCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCTCCCCTGAAGACCCTTaGGGCGGCATCCGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTSPEDP*GGIRVA
Trigger: AGCCACGCGGATGCCGCCTCAAGGGTCTTCAGGGGA...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR TCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCTCCTCTGGCCTCCCCTaGAGACCCTTGAGGCGGCAT +
Preference number: 2 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPSSGLP*RPLRRH
Trigger: ATGCCGCCTCAAGGGTCTTCAGGGGAGGCCAGAGGA...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR TCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCGCAGAGGAGGGAAACTaGGGCCCAGAGAACCACCCA +
Preference number: 2 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPAEEGN*GPENHP
Trigger: TGGGTGGTTCTCTGGGCCTCAGTTTCCCTCCTCTGC...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR CCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCCCAGCAGCTCTCCTCTaGCCTCCCCTGAAGACCCTT +
Preference number: 2 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPPAALL*PPLKTL
Trigger: AAGGGTCTTCAGGGGAGGCCAGAGGAGAGCTGCTGG...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR TCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTTCCCCTGAAGACCCTTaGGGCGGCATCCGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: WRPRSPSPNIVQTEESWASPEDP*GGIRVA
Trigger: AGCCACGCGGATGCCGCCTCAAGGGTCTTCAGGGGA...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR TCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCGCAGAGGAGGGAAACTaGGGCCCAGAGAACCACCCA +
Preference number: 2 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTAEEGN*GPENHP
Trigger: TGGGTGGTTCTCTGGGCCTCAGTTTCCCTCCTCTGC...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGCCAGCAGCTCTCCTCTaGCCTCCCCTGAAGACCCTT +
Preference number: 2 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLPAALL*PPLKTL
Trigger: AAGGGTCTTCAGGGGAGGCCAGAGGAGAGCTGCTGG...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR TCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGTCCCCTGAAGACCCTTaGGGCGGCATCCGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQSPEDP*GGIRVA
Trigger: AGCCACGCGGATGCCGCCTCAAGGGTCTTCAGGGGA...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR GCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCCTGACCCCCTCGTTTTaGAGAGGAGGGAAACTGAGG +
Preference number: 2 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPLTPSF*RGGKLR
Trigger: CCTCAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAG...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR TCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGTCCTCTGGCCTCCCCTaGAGACCCTTGAGGCGGCAT +
Preference number: 2 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQSSGLP*RPLRRH
Trigger: ATGCCGCCTCAAGGGTCTTCAGGGGAGGCCAGAGGA...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACAATAAATACCCTCCCTaGAGACCCAGAAGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDNKYPP*RPRSPS
Trigger: ACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATT...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR TCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCGCAGAGGAGGGAAACTaGGGCCCAGAGAACCACCCA +
Preference number: 2 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIAEEGN*GPENHP
Trigger: TGGGTGGTTCTCTGGGCCTCAGTTTCCCTCCTCTGC...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCAGCAGCTCTCCTCTaGCCTCCCCTGAAGACCCTT +
Preference number: 2 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIPAALL*PPLKTL
Trigger: AAGGGTCTTCAGGGGAGGCCAGAGGAGAGCTGCTGG...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR GCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCTGACCCCCTCGTTTTaGAGAGGAGGGAAACTGAGG +
Preference number: 2 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQILTPSF*RGGKLR
Trigger: CCTCAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAG...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGAATAAATACCCTCCCTaGAGACCCAGAAGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQNKYPP*RPRSPS
Trigger: ACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATT...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR TCA 72 bp CTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGAGGTGTACCCGACCAC +
Preference number: 3 (lower is better)
Translates to: LAQPPQEGRGRL*VAAGPGGVPDH
Trigger: GTGGTCGGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
3UTR GCA 72 bp AGCCACTCACGGAAGTACGACTTGGACCAGCGTGTCTaGTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTC +
Preference number: 3 (lower is better)
Translates to: SHSRKYDLDQRV*WLSHRRKDEGV
Trigger: GACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGAGTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
3UTR CCA 72 bp CACTCACGGAAGTACGACTTGGACCAGCGTGTCTGCTaGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCT +
Preference number: 3 (lower is better)
Translates to: HSRKYDLDQRVC*LSHRRKDEGVS
Trigger: AGAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
3UTR TCA 72 bp AGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTaGCCAATAAATACCCTCCCTGGAGACCCAGAAGTC +
Preference number: 3 (lower is better)
Translates to: RTLSLHSSDPTP*PINTLPGDPEV
Trigger: GACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR-3UTR CAA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCGCTGACCCCCTCGTTTaGCAGAGGAGGGAAACTGAG +
Preference number: 3 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIADPLV*QRRETE
Trigger: CTCAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGC...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR CCA 72 bp AGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTaGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACT +
Preference number: 3 (lower is better)
Translates to: SPSPNIVQTEES*ADPLVLQRRET
Trigger: AGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ACAGGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCTTGCCGCCCCAGCGCTaGGCCACGCACACGCACCTG +
Preference number: 4 (lower is better)
Translates to: TGRRPPPRRSSTHGAGATLPPQR*ATHTHL
Trigger: CAGGTGCGTGTGCGTGGCGCAGCGCTGGGGCGGCAA...GGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR GCA 90 bp CGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGGAGGGCATCATCGCGTaGTCCCTGGGGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRPPPRRSSTHGAGATRAEGIIA*SLGPGQ
Trigger: CTGCCCAGGCCCCAGGGAGCACGCGATGATGCCCTC...CGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR TCA 90 bp CGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: RRPPPRRSSTHGAGATRAGRGRL*VAAGPG
Trigger: TCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCC...CGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR TCA 90 bp ACAGGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCCACGGGGGCGAGGAATaGGGGCATCATCGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: TGRRPPPRRSSTHGAGATHGGEE*GHHRVL
Trigger: GAGCACGCGATGATGCCCTCATTCCTCGCCCCCGTG...GGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR CCA 90 bp GCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGTCCCACACGTACGTaGCGGGGTCCTCGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: AGDHRLVGHPRMVPVPPERPTRT*RGPRQR
Trigger: TCGCTGACGAGGACCCCGCCACGTACGTGTGGGACG...CTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR GCA 90 bp GGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGATTGGACCAGCGTGTCTaGTGGCTCAGCCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRRPPPRRSSTHGAGATRLDQRV*WLSHRR
Trigger: CCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAA...TCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR GCA 90 bp CGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCACGCATGGTGCCGGTaGCACCAGAGCGCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: RRPPPRRSSTHGAGATRAHAWCR*HQSALY
Trigger: GTACAACGCGCTCTGGTGGCACCGGCACCATGCGTG...CGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR GCA 90 bp CCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTGTCATCCACGCATGGTaGCGGTGCCACCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: PPPRRSSTHGAGATRARCVIHAW*RCHQSA
Trigger: CGCGCTCTGGTGGCACCGGCACCATGCGTGGATGAC...ACAACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR CCA 90 bp CGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGAGTAGCAGCGGGACCTaGAGGTGTACCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: RRPPPRRSSTHGAGATRASSSGT*RCTCTG
Trigger: CCCCGTGCAGGTACACCTCCAGGTCCCGCTGCTACT...CGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR TCA 90 bp GCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGGGCTGCTTAGGAAGCTaGCCCAGGAGTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AGDHRLVGHPRMVPVPPEGCLGS*PRSPEG
Trigger: ACCCTCTGGACTCCTGGGTCAGCTTCCTAAGCAGCC...CTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR GCA 90 bp CACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACCACGCACACGCACCTaGGAGTCCTCACCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: HRLVGHPRMVPVPPERVVPRTRT*ESSPAP
Trigger: AGGCGCTGGTGAGGACTCGCAGGTGCGTGTGCGTGG...TACAACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR GCA 90 bp CTTGGACCAGCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCCACGCATGGTGCCGGTaGCACCAGAGCGCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LGPACLLAQPPQEGRGRLHAWCR*HQSALY
Trigger: GTACAACGCGCTCTGGTGGCACCGGCACCATGCGTG...GAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR GCA 90 bp GGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCACCTGGAGGTGTACCTaGACGGGGGCGAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: GDHRLVGHPRMVPVPPERTWRCT*TGARNE
Trigger: CTCATTCCTCGCCCCCGTGCAGGTACACCTCCAGGT...GCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR CCA 90 bp CCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTGACCAGCGTGTCTGCTaGCTCAGCCACCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPPRRSSTHGAGATRARCDQRVC*LSHRRK
Trigger: CTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTC...ACAACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR CCA 90 bp CTTGGACCAGCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCGACCAGCGTGTCTGCTaGCTCAGCCACCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGPACLLAQPPQEGRGRLDQRVC*LSHRRK
Trigger: CTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTC...GAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CCA 90 bp GGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCACAGACGCAGCACAGTaGCCGCCACGAAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GDHRLVGHPRMVPVPPERTDAAQ*PPRRRG
Trigger: TCCCCTTCTTCGTGGCGGCCACTGTGCTGCGTCTGT...GCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR CCA 90 bp GCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGTCATCGCGTGCTCCCTaGGGCCTGGGCAGGATTCTA +
Preference number: 4 (lower is better)
Translates to: AGDHRLVGHPRMVPVPPESSRAP*GLGRIL
Trigger: TAGAATCCTGCCCAGGCCCCAGGGAGCACGCGATGA...CTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR TCA 90 bp CACGGAAGTACGACTTGGACCAGCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: HGSTTWTSVSAGSATAGRGRGRL*VAAGPG
Trigger: TCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCC...CCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR GCA 90 bp AGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTAGGGCTGGTGGTAGTTaGCGTCCCACACGTACGTGG +
Preference number: 4 (lower is better)
Translates to: RPPPRRSSTHGAGATRARRAGGS*RPTRTW
Trigger: CCACGTACGTGTGGGACGGCAACTACCACCAGCCCT...ACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR GCA 90 bp GCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCACGAGCTCCAGCAGTaGCATGGGGTCCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: AGDHRLVGHPRMVPVPPEHELQQ*HGVQPC
Trigger: ACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTG...CTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR GCA 90 bp CACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACAGCCACTCACGGAAGTACGTCATCCACGCATGGTaGCGGTGCCACCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: HAWCRCHQSALYSHSRKYVIHAW*RCHQSA
Trigger: CGCGCTCTGGTGGCACCGGCACCATGCGTGGATGAC...GTACTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCACCGGCACCATGCGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACGCGGACGCCAGGCACTaGCGCAGGTACGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDADARH*RRYAGS
Trigger: GGACCCCGCGTACCTGCGCCAGTGCCTGGCGTCCGC...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CTTGGACCAGCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCGCTCCAGCAGTGCCATaGGGTCCAACCTTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: LGPACLLAQPPQEGRGRLAPAVP*GPTLCP
Trigger: CGGACACAAGGTTGGACCCCATGGCACTGCTGGAGC...GAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CCA 90 bp AGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTAGTAGCAGCGGGACCTaGAGGTGTACCCGACCACCT +
Preference number: 4 (lower is better)
Translates to: RPPPRRSSTHGAGATRARSSSGT*RCTRPP
Trigger: AGGTGGTCGGGTACACCTCCAGGTCCCGCTGCTACT...ACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR TCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCTGCCATCCACCACCATaGGGACGCGCAGCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPCHPPP*GRAAAR
Trigger: GCGCGCGGCTGCGCGTCCTCATGGTGGTGGATGGCA...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp CCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACAGGCTGCTTAGGAAGCTaGCCCAGGAGTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PPRRSSTHGAGATRARCTGCLGS*PRSPEG
Trigger: ACCCTCTGGACTCCTGGGTCAGCTTCCTAAGCAGCC...TGTACAACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR GCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCTTGCCGCCCCAGCGCTaGGCCACGCACACGCACCTG +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPLPPQR*ATHTHL
Trigger: CAGGTGCGTGTGCGTGGCGCAGCGCTGGGGCGGCAA...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCGGCCCTGGCCTCGTGTaGTACGCTGCGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPGPGLV*YAADQA
Trigger: GGCCTGGTCCGCAGCGTAGCACACGAGGCCAGGGCC...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACAGCTCCAGCAGTGCCATaGGGTCCAACCTTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: PPRRSSTHGAGATRARCTAPAVP*GPTLCP
Trigger: CGGACACAAGGTTGGACCCCATGGCACTGCTGGAGC...TGTACAACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR CCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCCCGCGAAGGCCGCCTTaGCCAGTGCCACGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPPRRPP*PVPRPA
Trigger: TGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGG...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTGTGTACCCGACCACCTaGTCCCCTCAGCTTACTTGG +
Preference number: 4 (lower is better)
Translates to: RPPPRRSSTHGAGATRARVYPTT*SPQLTW
Trigger: CCAAGTAAGCTGAGGGGACCAGGTGGTCGGGTACAC...ACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR GCA 90 bp ACAGCCACTCACGGAAGTACGACTTGGACCAGCGTGTCTGCTGGCTCAGCCACCTTGGACCAGCGTGTCTaGTGGCTCAGCCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: TATHGSTTWTSVSAGSATLDQRV*WLSHRR
Trigger: CCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAA...GGTGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGAGTGGCTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR GCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCGGCCGCCTTGGCCAGTaGCACGCCCTGCACGCACAG +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPGRLGQ*HALHAQ
Trigger: CTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCC...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCGCGACAGAAGCACCATaGGCAGGCAGCCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPATEAP*AGSPAA
Trigger: GGCTGCGGGGCTGCCTGCGCATGGTGCTTCTGTCGC...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACGCGACAGAAGCACCATaGGCAGGCAGCCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDATEAP*AGSPAA
Trigger: GGCTGCGGGGCTGCCTGCGCATGGTGCTTCTGTCGC...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCTCCGCCGGCCCGAGGTaGCCCAGCCACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPSAGPR*PSHSGS
Trigger: TGAACCAGAGTGGCTGGGGCACCTCGGGCCGGCGGA...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCGTGGTAGGCCTCGGCTaGGCGGGAAGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPVVGLG*AGRAAP
Trigger: TGGAGCGGCCCTTCCCGCGCAGCCGAGGCCTACCAC...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCCACACTGCGCGCGGTaGCTGCATCCAGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTPHCAR*LHPAAP
Trigger: GGGGGCCGCTGGATGCAGCCACCGCGCGCAGTGTGG...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGCGGACGCCAGGCACTaGCGCAGGTACGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLADARH*RRYAGS
Trigger: GGACCCCGCGTACCTGCGCCAGTGCCTGGCGTCCGC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACACGGAAGTACGACTTaGACCAGCGTGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HRLVGHPRMVPVPPERVVHGSTT*TSVSAG
Trigger: GCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTG...TACAACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR CCA 90 bp CCACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACAGCCACTCACGGAAGTAACAGACGCAGCACAGTaGCCGCCACGAAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PRMVPVPPERVVQPLTEVTDAAQ*PPRRRG
Trigger: TCCCCTTCTTCGTGGCGGCCACTGTGCTGCGTCTGT...TACTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCACCGGCACCATGCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCCGCTCCAGTCGGCCCTaGCCTCGTGTGCTACGCTGC +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPRSSRP*PRVLRC
Trigger: GCAGCGTAGCACACGAGGCCAGGGCCGACTGGAGCG...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCGCCACCAGGTGCGCTaGAAGGAAGGCCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDRHQVR*KEGPVE
Trigger: CTCTACGGGGCCTTCCTTTCAGCGCACCTGGTGGCG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp ACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACAGCCACTCACGGAAGTACGGGCCTAGAGGACCGCTaGTGCAGGATACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: THGAGATRARCTATHGSTGLEDR*CRIHSG
Trigger: TCCACTGTGTATCCTGCATCAGCGGTCCTCTAGGCC...CGTACTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCACCGGCACCATGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR TCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPGRGRL*VAAGPG
Trigger: TCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCC...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp ACAGGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCATTCTAGAGGACCGCTaGTGCAGGATACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: TGRRPPPRRSSTHGAGATILEDR*CRIHSG
Trigger: TCCACTGTGTATCCTGCATCAGCGGTCCTCTAGAAT...GGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCCTGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR GCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCCACGCACACGCACCTaGGAGTCCTCACCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDPRTRT*ESSPAP
Trigger: AGGCGCTGGTGAGGACTCGCAGGTGCGTGTGCGTGG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCTTGCCGCCCCAGCGCTaGGCCACGCACACGCACCTG +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTLPPQR*ATHTHL
Trigger: CAGGTGCGTGTGCGTGGCGCAGCGCTGGGGCGGCAA...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACAGCCACTCACGGAAGTACGCACGAGCTCCAGCAGTaGCATGGGGTCCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: THGAGATRARCTATHGSTHELQQ*HGVQPC
Trigger: ACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTG...CGTACTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCACCGGCACCATGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR GCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACGTCATCCACGCATGGTaGCGGTGCCACCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDVIHAW*RCHQSA
Trigger: CGCGCTCTGGTGGCACCGGCACCATGCGTGGATGAC...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCGCCAGTGCCACGCCCTaGACGCACAGCAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPASATP*THSSTH
Trigger: GTGGGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGC...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTGGCCGCCTTGGCCAGTaGCACGCCCTGCACGCACAG +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSGRLGQ*HALHAQ
Trigger: CTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCC...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCTCCGCCGGCCCGAGGTaGCCCAGCCACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPSAGPR*PSHSGS
Trigger: TGAACCAGAGTGGCTGGGGCACCTCGGGCCGGCGGA...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCGTGGTAGGCCTCGGCTaGGCGGGAAGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTVVGLG*AGRAAP
Trigger: TGGAGCGGCCCTTCCCGCGCAGCCGAGGCCTACCAC...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCGCAGGGCGAAGGCGATaGTCAGCACCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPAGRRR*SAPSGP
Trigger: TGGCCCGGAGGGTGCTGACCATCGCCTTCGCCCTGC...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCCCTGGTAGGCGGAGATaGTCAGCGCCACACTGCGCG +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPPGRRR*SAPHCA
Trigger: CGCGCAGTGTGGCGCTGACCATCTCCGCCTACCAGG...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCGTCCCACACGTACGTaGCGGGGTCCTCGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDRPTRT*RGPRQR
Trigger: TCGCTGACGAGGACCCCGCCACGTACGTGTGGGACG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp GGAACAGGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCGTACCCAGGAACTTCTaGTTGTACCAGGCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GTGRRPPPRRSSTHGAGAVPRNF*LYQASR
Trigger: TCTTGAGGCCTGGTACAACCAGAAGTTCCTGGGTAC...GGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCCTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CCA 90 bp ACAGGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCTCCCCAAAAGTACAGTaGGTACCCAGGAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: TGRRPPPRRSSTHGAGATSPKVQ*VPRNFW
Trigger: CCAGAAGTTCCTGGGTACCCACTGTACTTTTGGGGA...GGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CCA 90 bp ACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACAGCCACTCACGGAAGTACGCACGGAAGTACGACTTaGACCAGCGTGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: THGAGATRARCTATHGSTHGSTT*TSVSAG
Trigger: GCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTG...CGTACTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCACCGGCACCATGCGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCCGCGAAGGCCGCCTTaGCCAGTGCCACGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTPRRPP*PVPRPA
Trigger: TGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGG...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
3UTR CAA 72 bp GTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTaGTACAGCCACTCACGGAAGTACGACTTGGACCAG +
Preference number: 4 (lower is better)
Translates to: VIHAWCRCHQSA*YSHSRKYDLDQ
Trigger: CTGGTCCAAGTCGTACTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR TCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCTGCCATCCACCACCATaGGGACGCGCAGCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLCHPPP*GRAAAR
Trigger: GCGCGCGGCTGCGCGTCCTCATGGTGGTGGATGGCA...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCTCCCCTGAAGACCCTTaGGGCGGCATCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPSPEDP*GGIRVA
Trigger: AGCCACGCGGATGCCGCCTCAAGGGTCTTCAGGGGA...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCTTGGACCAGCGTGTCTaGTGGCTCAGCCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPLDQRV*WLSHRR
Trigger: CCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAA...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCCACGCATGGTGCCGGTaGCACCAGAGCGCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPHAWCR*HQSALY
Trigger: GTACAACGCGCTCTGGTGGCACCGGCACCATGCGTG...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCGCCAGTGCCACGCCCTaGACGCACAGCAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTASATP*THSSTH
Trigger: GTGGGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGC...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCGGCCGCCTTGGCCAGTaGCACGCCCTGCACGCACAG +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLGRLGQ*HALHAQ
Trigger: CTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCC...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGCGACAGAAGCACCATaGGCAGGCAGCCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLATEAP*AGSPAA
Trigger: GGCTGCGGGGCTGCCTGCGCATGGTGCTTCTGTCGC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCTCCGCCGGCCCGAGGTaGCCCAGCCACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTSAGPR*PSHSGS
Trigger: TGAACCAGAGTGGCTGGGGCACCTCGGGCCGGCGGA...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTGCAGGGCGAAGGCGATaGTCAGCACCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSAGRRR*SAPSGP
Trigger: TGGCCCGGAGGGTGCTGACCATCGCCTTCGCCCTGC...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGCAGGGCGAAGGCGATaGTCAGCACCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLAGRRR*SAPSGP
Trigger: TGGCCCGGAGGGTGCTGACCATCGCCTTCGCCCTGC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCCCTGGTAGGCGGAGATaGTCAGCGCCACACTGCGCG +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPPGRRR*SAPHCA
Trigger: CGCGCAGTGTGGCGCTGACCATCTCCGCCTACCAGG...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGCGCTCCAGTCGGCCCTaGCCTCGTGTGCTACGCTGC +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLRSSRP*PRVLRC
Trigger: GCAGCGTAGCACACGAGGCCAGGGCCGACTGGAGCG...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGCGGCATCCGCGTGGCTaGACTCACACCTGGACGCGG +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLRHPRG*THTWTR
Trigger: CCGCGTCCAGGTGTGAGTCCAGCCACGCGGATGCCG...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCGAGGCGGCATCCGCGTaGCTGGACTCACACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPEAASA*LDSHLD
Trigger: GTCCAGGTGTGAGTCCAGCCACGCGGATGCCGCCTC...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCCTGTCTCATCGCAGTaGGTCTGGCCGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDPVSSQ*VWPGSL
Trigger: GAGAGAGCCCGGCCAGACCCACTGCGATGAGACAGG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540069.7
CDS-3UTR TCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLGRGRL*VAAGPG
Trigger: TCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTGRGRL*VAAGPG
Trigger: TCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCC...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTCTGCGCCACCAGGTaGGCTGAAAGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTLCATR*AERKAP
Trigger: CGGGGCCTTCCTTTCAGCGCACCTGGTGGCGCAGAG...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGCTCTGCGCCACCAGGTaGGCTGAAAGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLLCATR*AERKAP
Trigger: CGGGGCCTTCCTTTCAGCGCACCTGGTGGCGCAGAG...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCTCTGCGCCACCAGGTaGGCTGAAAGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSLCATR*AERKAP
Trigger: CGGGGCCTTCCTTTCAGCGCACCTGGTGGCGCAGAG...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACTACGCGAAGAGGCTCTaGGCCACCAGGTGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDYAKRL*ATRCAE
Trigger: TTCAGCGCACCTGGTGGCGCAGAGCCTCTTCGCGTA...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCTGGTCAGCGCCACACTaGGCGCGGTGGCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTWSAPH*ARWLHP
Trigger: TGGATGCAGCCACCGCGCGCAGTGTGGCGCTGACCA...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCAGGGCTGGTGGTAGTTaGCGTCCCACACGTACGTGG +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPRAGGS*RPTRTW
Trigger: CCACGTACGTGTGGGACGGCAACTACCACCAGCCCT...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCCACGCACACGCACCTaGGAGTCCTCACCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTPRTRT*ESSPAP
Trigger: AGGCGCTGGTGAGGACTCGCAGGTGCGTGTGCGTGG...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCACGCACACGCACCTaGGAGTCCTCACCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSPRTRT*ESSPAP
Trigger: AGGCGCTGGTGAGGACTCGCAGGTGCGTGTGCGTGG...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGTCATCCACGCATGGTaGCGGTGCCACCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLVIHAW*RCHQSA
Trigger: CGCGCTCTGGTGGCACCGGCACCATGCGTGGATGAC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCGTCATCCACGCATGGTaGCGGTGCCACCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTVIHAW*RCHQSA
Trigger: CGCGCTCTGGTGGCACCGGCACCATGCGTGGATGAC...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGTGGTAGGCCTCGGCTaGGCGGGAAGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWAVVGLG*AGRAAP
Trigger: TGGAGCGGCCCTTCCCGCGCAGCCGAGGCCTACCAC...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGGCGGACGCCAGGCACTaGCGCAGGTACGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQADARH*RRYAGS
Trigger: GGACCCCGCGTACCTGCGCCAGTGCCTGGCGTCCGC...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCGCTCCAGCAGTGCCATaGGGTCCAACCTTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPAPAVP*GPTLCP
Trigger: CGGACACAAGGTTGGACCCCATGGCACTGCTGGAGC...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCACAGACGCAGCACAGTaGCCGCCACGAAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPTDAAQ*PPRRRG
Trigger: TCCCCTTCTTCGTGGCGGCCACTGTGCTGCGTCTGT...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACACAGACGCAGCACAGTaGCCGCCACGAAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDTDAAQ*PPRRRG
Trigger: TCCCCTTCTTCGTGGCGGCCACTGTGCTGCGTCTGT...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCTAGCGCCAGGAACTTaGCAGGCAGGAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDLAPGT*QAGGHT
Trigger: TGTGTGGCCTCCTGCCTGCCAAGTTCCTGGCGCTAG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGAGGCGGCATCCGCGTaGCTGGACTCACACCTGGAC +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLEAASA*LDSHLD
Trigger: GTCCAGGTGTGAGTCCAGCCACGCGGATGCCGCCTC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCCAGCAGCTCTCCTCTaGCCTCCCCTGAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDPAALL*PPLKTL
Trigger: AAGGGTCTTCAGGGGAGGCCAGAGGAGAGCTGCTGG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCGGCAGGCTGCAGGAGTaGGCTTGGGCGCGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLGRLQE*AWARPV
Trigger: GACAGGACGCGCCCAAGCCCACTCCTGCAGCCTGCC...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540069.7
CDS-3UTR CCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCCTGCAGGAGTGGGCTTaGGCGCGTCCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLLQEWA*ARPAGS
Trigger: GCTCCCAGCAGGACGCGCCCAAGCCCACTCCTGCAG...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601714.5
CDS-3UTR TCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCGGCTGCTTAGGAAGCTaGCCCAGGAGTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPGCLGS*PRSPEG
Trigger: ACCCTCTGGACTCCTGGGTCAGCTTCCTAAGCAGCC...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCTACGCGAAGAGGCTCTaGGCCACCAGGTGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPYAKRL*ATRCAE
Trigger: TTCAGCGCACCTGGTGGCGCAGAGCCTCTTCGCGTA...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCTGGTCAGCGCCACACTaGGCGCGGTGGCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLWSAPH*ARWLHP
Trigger: TGGATGCAGCCACCGCGCGCAGTGTGGCGCTGACCA...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGTTGCCGCCCCAGCGCTaGGCCACGCACACGCACCTG +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQLPPQR*ATHTHL
Trigger: CAGGTGCGTGTGCGTGGCGCAGCGCTGGGGCGGCAA...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp GCGTCTCTGAGTAGCAGCGGGACCTGGAGGTGTACCCGACCACCTGGTCCCCTCCAGGCCTCAAGAAACTaGTGCAAGAGGTTATTCCTA +
Preference number: 4 (lower is better)
Translates to: ASLSSSGTWRCTRPPGPLQASRN*CKRLFL
Trigger: TAGGAATAACCTCTTGCAGCAGTTTCTTGAGGCCTG...GAGGGGACCAGGTGGTCGGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCTTGGACCAGCGTGTCTaGTGGCTCAGCCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTLDQRV*WLSHRR
Trigger: CCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAA...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGCACGCATGGTGCCGGTaGCACCAGAGCGCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLHAWCR*HQSALY
Trigger: GTACAACGCGCTCTGGTGGCACCGGCACCATGCGTG...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCCCTCGTGTGCTACGCTaGGGACCAGGCCCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLPRVLR*GPGPQA
Trigger: TGCTTGGGGGCCTGGTCCGCAGCGTAGCACACGAGG...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGGGCCCTGGCCTCGTGTaGTACGCTGCGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQGPGLV*YAADQA
Trigger: GGCCTGGTCCGCAGCGTAGCACACGAGGCCAGGGCC...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACTCATCGCAGTGGGTCTaGCCGGGCTCTCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDSSQWV*PGSLFS
Trigger: AGAGAAGAGAGAGCCCGGCCAGACCCACTGCGATGA...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222115.5
ENST00000540069.7
CDS-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACTGCGCGCGGTaGCTGCATCCAGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIPHCAR*LHPAAP
Trigger: GGGGGCCGCTGGATGCAGCCACCGCGCGCAGTGTGG...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCCGTCCCACACGTACGTaGCGGGGTCCTCGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLRPTRT*RGPRQR
Trigger: TCGCTGACGAGGACCCCGCCACGTACGTGTGGGACG...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTGACCAGCGTGTCTGCTaGCTCAGCCACCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSDQRVC*LSHRRK
Trigger: CTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTC...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCACGGAAGTACGACTTaGACCAGCGTGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDHGSTT*TSVSAG
Trigger: GCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTCGCTCCAGTCGGCCCTaGCCTCGTGTGCTACGCTGC +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWARSSRP*PRVLRC
Trigger: GCAGCGTAGCACACGAGGCCAGGGCCGACTGGAGCG...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTCGGCATCCGCGTGGCTaGACTCACACCTGGACGCGG +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWARHPRG*THTWTR
Trigger: CCGCGTCCAGGTGTGAGTCCAGCCACGCGGATGCCG...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCGAGGCGGCATCCGCGTaGCTGGACTCACACCTGGAC +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLEAASA*LDSHLD
Trigger: GTCCAGGTGTGAGTCCAGCCACGCGGATGCCGCCTC...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTCGCCACCAGGTGCGCTaGAAGGAAGGCCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWARHQVR*KEGPVE
Trigger: CTCTACGGGGCCTTCCTTTCAGCGCACCTGGTGGCG...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCGGCTGCTTAGGAAGCTaGCCCAGGAGTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTGCLGS*PRSPEG
Trigger: ACCCTCTGGACTCCTGGGTCAGCTTCCTAAGCAGCC...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCTCCTCTGGCCTCCCCTaGAGACCCTTGAGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLSSGLP*RPLRRH
Trigger: ATGCCGCCTCAAGGGTCTTCAGGGGAGGCCAGAGGA...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGCAGAGGAGGGAAACTaGGGCCCAGAGAACCACCCA +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLAEEGN*GPENHP
Trigger: TGGGTGGTTCTCTGGGCCTCAGTTTCCCTCCTCTGC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTGCAGAGGAGGGAAACTaGGGCCCAGAGAACCACCCA +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSAEEGN*GPENHP
Trigger: TGGGTGGTTCTCTGGGCCTCAGTTTCCCTCCTCTGC...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCCACGAGCTCCAGCAGTaGCATGGGGTCCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPHELQQ*HGVQPC
Trigger: ACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTG...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGGCTTGGGCGCGTCCTaGTGGGAGCGAGAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWAGLGAS*WEREGK
Trigger: TTTCCCCTCTCGCTCCCAGCAGGACGCGCCCAAGCC...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGGGCAGGCTGCAGGAGTaGGCTTGGGCGCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQGRLQE*AWARPA
Trigger: AGCAGGACGCGCCCAAGCCCACTCCTGCAGCCTGCC...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222115.5
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGCTCCAGCAGTGCCATaGGGTCCAACCTTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLAPAVP*GPTLCP
Trigger: CGGACACAAGGTTGGACCCCATGGCACTGCTGGAGC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCGCGAAGGCCGCCTTaGCCAGTGCCACGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIPRRPP*PVPRPA
Trigger: TGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGG...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCGTGCCCCAGCCACTCTaGTTCATGGTGACTAGCGCC +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTVPQPL*FMVTSA
Trigger: GGCGCTAGTCACCATGAACCAGAGTGGCTGGGGCAC...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGCGGCATCCGCGTGGCTaGACTCACACCTGGACGCGG +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQRHPRG*THTWTR
Trigger: CCGCGTCCAGGTGTGAGTCCAGCCACGCGGATGCCG...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTCACCCAGCAAGTTCGTaGCTCGGGGCCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWAHPASS*LGAQQL
Trigger: GAGCTGCTGGGCCCCGAGCCACGAACTTGCTGGGTG...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGCGCCACCAGGTGCGCTaGAAGGAAGGCCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQRHQVR*KEGPVE
Trigger: CTCTACGGGGCCTTCCTTTCAGCGCACCTGGTGGCG...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTGGCCTAGAGGACCGCTaGTGCAGGATACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSGLEDR*CRIHSG
Trigger: TCCACTGTGTATCCTGCATCAGCGGTCCTCTAGGCC...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTTCCTCTGGCCTCCCCTaGAGACCCTTGAGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWASSGLP*RPLRRH
Trigger: ATGCCGCCTCAAGGGTCTTCAGGGGAGGCCAGAGGA...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCACGAGCTCCAGCAGTaGCATGGGGTCCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSHELQQ*HGVQPC
Trigger: ACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTG...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCACGAGCTCCAGCAGTaGCATGGGGTCCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTHELQQ*HGVQPC
Trigger: ACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTG...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGCCTCGTGTGCTACGCTaGGGACCAGGCCCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQPRVLR*GPGPQA
Trigger: TGCTTGGGGGCCTGGTCCGCAGCGTAGCACACGAGG...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTTCATCGCAGTGGGTCTaGCCGGGCTCTCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSSSQWV*PGSLFS
Trigger: AGAGAAGAGAGAGCCCGGCCAGACCCACTGCGATGA...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222115.5
ENST00000540069.7
CDS-3UTR CCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCACGGAAGTACGACTTaGACCAGCGTGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTHGSTT*TSVSAG
Trigger: GCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTG...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCCTAGCGCCAGGAACTTaGCAGGCAGGAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLLAPGT*QAGGHT
Trigger: TGTGTGGCCTCCTGCCTGCCAAGTTCCTGGCGCTAG...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTGCCCCAGCCACTCTaGTTCATGGTGACTAGCGCC +
Preference number: 4 (lower is better)
Translates to: RSPSPNIVQTEESWADPLVPQPL*FMVTSA
Trigger: GGCGCTAGTCACCATGAACCAGAGTGGCTGGGGCAC...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGCACCCAGCAAGTTCGTaGCTCGGGGCCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQHPASS*LGAQQL
Trigger: GAGCTGCTGGGCCCCGAGCCACGAACTTGCTGGGTG...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTCTGCAGGAGTGGGCTTaGGCGCGTCCTGTCTCATCG +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWALQEWA*ARPVSS
Trigger: CGATGAGACAGGACGCGCCCAAGCCCACTCCTGCAG...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540069.7
CDS-3UTR GCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTAGGGCTGGTGGTAGTTaGCGTCCCACACGTACGTGG +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWARAGGS*RPTRTW
Trigger: CCACGTACGTGTGGGACGGCAACTACCACCAGCCCT...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGTTGGACCAGCGTGTCTaGTGGCTCAGCCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQLDQRV*WLSHRR
Trigger: CCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAA...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGCACGCATGGTGCCGGTaGCACCAGAGCGCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQHAWCR*HQSALY
Trigger: GTACAACGCGCTCTGGTGGCACCGGCACCATGCGTG...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCTGACCCCCTCGTTTTaGAGAGGAGGGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSLTPSF*RGGKLR
Trigger: CCTCAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAG...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACTCCCCAAAAGTACAGTaGGTACCCAGGAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDSPKVQ*VPRNFW
Trigger: CCAGAAGTTCCTGGGTACCCACTGTACTTTTGGGGA...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGGACCAGCGTGTCTGCTaGCTCAGCCACCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQDQRVC*LSHRRK
Trigger: CTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTC...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTCTAGCGCCAGGAACTTaGCAGGCAGGAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWALAPGT*QAGGHT
Trigger: TGTGTGGCCTCCTGCCTGCCAAGTTCCTGGCGCTAG...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCAGTACAGCGTCAACATaGCCACCCAGTAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTSTAST*PPSSPR
Trigger: ACGTGGGCTACTGGGTGGCCATGTTGACGCTGTACT...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGAGTACAGCGTCAACATaGCCACCCAGTAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLSTAST*PPSSPR
Trigger: ACGTGGGCTACTGGGTGGCCATGTTGACGCTGTACT...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGGCAGAGGAGGGAAACTaGGGCCCAGAGAACCACCCA +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQAEEGN*GPENHP
Trigger: TGGGTGGTTCTCTGGGCCTCAGTTTCCCTCCTCTGC...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCGCTGTCTCATCGCAGTaGGTCTGGCCGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIAVSSQ*VWPGSL
Trigger: GAGAGAGCCCGGCCAGACCCACTGCGATGAGACAGC...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222115.5
CDS-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCTGCAGGAGTGGGCTTaGGCGCGTCCTGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQILQEWA*ARPAVS
Trigger: TGAGACAGCAGGACGCGCCCAAGCCCACTCCTGCAG...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222115.5
CDS-3UTR CCA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCGTACCCAGGAACTTCTaGTTGTACCAGGCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPVPRNF*LYQASR
Trigger: TCTTGAGGCCTGGTACAACCAGAAGTTCCTGGGTAC...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTCACGGAAGTACGACTTaGACCAGCGTGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWAHGSTT*TSVSAG
Trigger: GCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTG...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCTTGGGCGCGTCCTGCTaGGAGCGAGAGGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQILGASC*EREGKG
Trigger: TCCTTTCCCCTCTCGCTCCCAGCAGGACGCGCCCAA...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601714.5
CDS-3UTR TCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCGGCTGCTTAGGAAGCTaGCCCAGGAGTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIGCLGS*PRSPEG
Trigger: ACCCTCTGGACTCCTGGGTCAGCTTCCTAAGCAGCC...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR TCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGGGCCTAGAGGACCGCTaGTGCAGGATACACAGTGGA +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQGLEDR*CRIHSG
Trigger: TCCACTGTGTATCCTGCATCAGCGGTCCTCTAGGCC...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACCAGGCCTCAAGAAACTaGTGCAAGAGGTTATTCCTA +
Preference number: 4 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDQASRN*CKRLFL
Trigger: TAGGAATAACCTCTTGCAGCAGTTTCTTGAGGCCTG...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCGCTCCAGCAGTGCCATaGGGTCCAACCTTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIAPAVP*GPTLCP
Trigger: CGGACACAAGGTTGGACCCCATGGCACTGCTGGAGC...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCGTGCCCCAGCCACTCTaGTTCATGGTGACTAGCGCC +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIVPQPL*FMVTSA
Trigger: GGCGCTAGTCACCATGAACCAGAGTGGCTGGGGCAC...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGCTGACCCCCTCGTTTTaGAGAGGAGGGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQLTPSF*RGGKLR
Trigger: CCTCAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAG...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGAGTACAGCGTCAACATaGCCACCCAGTAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQSTAST*PPSSPR
Trigger: ACGTGGGCTACTGGGTGGCCATGTTGACGCTGTACT...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCAATAAATACCCTCCCTaGAGACCCAGAAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTNKYPP*RPRSPS
Trigger: ACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATT...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGAATAAATACCCTCCCTaGAGACCCAGAAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLNKYPP*RPRSPS
Trigger: ACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATT...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCAGGCCTCAAGAAACTaGTGCAAGAGGTTATTCCTA +
Preference number: 4 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSQASRN*CKRLFL
Trigger: TAGGAATAACCTCTTGCAGCAGTTTCTTGAGGCCTG...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGGTACCCAGGAACTTCTaGTTGTACCAGGCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQVPRNF*LYQASR
Trigger: TCTTGAGGCCTGGTACAACCAGAAGTTCCTGGGTAC...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGTCCCCAAAAGTACAGTaGGTACCCAGGAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQSPKVQ*VPRNFW
Trigger: CCAGAAGTTCCTGGGTACCCACTGTACTTTTGGGGA...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR GCA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTCAGGCCTCAAGAAACTaGTGCAAGAGGTTATTCCTA +
Preference number: 4 (lower is better)
Translates to: WRPRSPSPNIVQTEESWAQASRN*CKRLFL
Trigger: TAGGAATAACCTCTTGCAGCAGTTTCTTGAGGCCTG...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CCA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCTCCCCAAAAGTACAGTaGGTACCCAGGAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQISPKVQ*VPRNFW
Trigger: CCAGAAGTTCCTGGGTACCCACTGTACTTTTGGGGA...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp CTCCTGGTAGGCGGAGATGGTCAGCGCCACACTGCGCGCGGTGGCTaGATCCAGCGGCCCCCGCGCCGCCGCCGCCACCCGCCGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LLVGGDGQRHTARGG*IQRPPRRRRHPPVL
Trigger: GAGCACCGGCGGGTGGCGGCGGCGGCGCGGGGGCCGCTGGATGCAGCCACCGCGCGCAGTGTGGCGCTGACCATCTCCGCCTACCAGGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp CCCCGCAGCCAGGCCGCGAAGGCCGCCTTGGCCAGTGCCACGCCCTaGACGCACAGCAGCACCCACAGCAGCGCCCAAGGGCGGCCCGCG +
Preference number: 5 (lower is better)
Translates to: PRSQAAKAALASATP*THSSTHSSAQGRPA
Trigger: CGCGGGCCGCCCTTGGGCGCTGCTGTGGGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CCA 90 bp GGTCCTCCTGGTAGGCGGAGATGGTCAGCGCCACACTGCGCGCGGTaGCTGCATCCAGCGGCCCCCGCGCCGCCGCCGCCACCCGCCGGT +
Preference number: 5 (lower is better)
Translates to: GPPGRRRWSAPHCAR*LHPAAPAPPPPPAG
Trigger: ACCGGCGGGTGGCGGCGGCGGCGCGGGGGCCGCTGGATGCAGCCACCGCGCGCAGTGTGGCGCTGACCATCTCCGCCTACCAGGAGGACC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp GCCCACGTAGGCGCCGGCCCCCGCGGCCAAGTGGTAGGCCTCGGCTaGGCGGGAAGGGCCGCTCCAGTCGGCCCTGGCCTCGTGTGCTAC +
Preference number: 5 (lower is better)
Translates to: AHVGAGPRGQVVGLG*AGRAAPVGPGLVCY
Trigger: GTAGCACACGAGGCCAGGGCCGACTGGAGCGGCCCTTCCCGCGCAGCCGAGGCCTACCACTTGGCCGCGGGGGCCGGCGCCTACGTGGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp GTGGCTGCATCCAGCGGCCCCCGCGCCGCCGCCGCCACCCGCCGGTaGTCCAGGTACGCGAAGAGGCTCTGCGCCACCAGGTGCGCTGAA +
Preference number: 5 (lower is better)
Translates to: VAASSGPRAAAATRR*SRYAKRLCATRCAE
Trigger: TTCAGCGCACCTGGTGGCGCAGAGCCTCTTCGCGTACCTGGAGCACCGGCGGGTGGCGGCGGCGGCGCGGGGGCCGCTGGATGCAGCCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp GCGCAGGCAGCCCCGCAGCCAGGCCGCGAAGGCCGCCTTGGCCAGTaGCACGCCCTGCACGCACAGCAGCACCCACAGCAGCGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: AQAAPQPGREGRLGQ*HALHAQQHPQQRPR
Trigger: CCTTGGGCGCTGCTGTGGGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGGCTGCCTGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CCA 90 bp GCACCATGCGCAGGCAGCCCCGCAGCCAGGCCGCGAAGGCCGCCTTaGCCAGTGCCACGCCCTGCACGCACAGCAGCACCCACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: APCAGSPAARPRRPP*PVPRPARTAAPTAA
Trigger: CGCTGCTGTGGGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGGCTGCCTGCGCATGGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp AGGCCGGAGCAGCGGCAGGCTGCAGGAGTGGGCTTGGGCGCGTCCTaGTGGGAGCGAGAGGGGAAAGGAAGGGGCATGAGTCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: RPEQRQAAGVGLGAS*WEREGKGRGMSPGR
Trigger: GCGCCCGGGACTCATGCCCCTTCCTTTCCCCTCTCGCTCCCAGCAGGACGCGCCCAAGCCCACTCCTGCAGCCTGCCGCTGCTCCGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601714.5
CDS CCA 90 bp GCCGCCGGCAAAGCCTCCGCACGCCCACCCAGTACAGCGTCAACATaGCCACCCAGTAGCCCACGTAGGCGCCGGCCCCCGCGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: AAGKASARPPSTAST*PPSSPRRRRPPRPS
Trigger: ACTTGGCCGCGGGGGCCGGCGCCTACGTGGGCTACTGGGTGGCCATGTTGACGCTGTACTGGGTGGGCGTGCGGAGGCTTTGCCGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CCA 90 bp GCTCTCCTCTGGCCTCCCCTGAAGACCCTTGAGGCGGCATCCGCGTaGCTGGACTCACACCTGGACGCGGTAGCCCCCGGTCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: ALLWPPLKTLEAASA*LDSHLDAVAPGPPP
Trigger: CGGCGGCGGACCGGGGGCTACCGCGTCCAGGTGTGAGTCCAGCCACGCGGATGCCGCCTCAAGGGTCTTCAGGGGAGGCCAGAGGAGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp CTGCGCCACGCACACGCACCTGCGAGTCCTCACCAGCGCCTCCACTaGCAGCCGCCCAGGATCCTCCGCCTCCACCTCCCGATAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LRHAHAPASPHQRLH*QPPRILRLHLPIGS
Trigger: GGAGCCTATCGGGAGGTGGAGGCGGAGGATCCTGGGCGGCTGGCAGTGGAGGCGCTGGTGAGGACTCGCAGGTGCGTGTGCGTGGCGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000594621.1
ENST00000601714.5
CDS TCA 90 bp GGCTCGGGGCCCAGCAGCTCTCCTCTGGCCTCCCCTGAAGACCCTTaGGGCGGCATCCGCGTGGCTGGACTCACACCTGGACGCGGTAGC +
Preference number: 5 (lower is better)
Translates to: GSGPSSSPLASPEDP*GGIRVAGLTPGRGS
Trigger: GCTACCGCGTCCAGGTGTGAGTCCAGCCACGCGGATGCCGCCTCAAGGGTCTTCAGGGGAGGCCAGAGGAGAGCTGCTGGGCCCCGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp GGAGGCCACACATGTAGAGGGGCGCGTAGAGCGACAGAAGCACCATaGGCAGGCAGCCCCGCAGCCAGGCCGCGAAGGCCGCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GGHTCRGARRATEAP*AGSPAARPRRPPWP
Trigger: TGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGGCTGCCTGCGCATGGTGCTTCTGTCGCTCTACGCGCCCCTCTACATGTGTGGCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp ACAGGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCTACATGACCTCGCGCTaGCCGCCCCAGCGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: TGRRPPPRRSSTHGAGATYMTSR*PPQRCA
Trigger: GGCGCAGCGCTGGGGCGGCAAGCGCGAGGTCATGTA...GGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS CCA 90 bp ACAGCAGCGCCCAAGGGCGGCCCGCGTAGAACAGACGCAGCACAGTaGCCGCCACGAAGAAGGGGAACAGGCCGGAGACCACCGCCTCGT +
Preference number: 5 (lower is better)
Translates to: TAAPKGGPRRTDAAQ*PPRRRGTGRRPPPR
Trigger: ACGAGGCGGTGGTCTCCGGCCTGTTCCCCTTCTTCGTGGCGGCCACTGTGCTGCGTCTGTTCTACGCGGGCCGCCCTTGGGCGCTGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS TCA 90 bp GCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGAGGTGTACCTGCACGGGGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: ACLLAQPPQEGRGRL*VAAGPGGVPARGRG
Trigger: TCCTCGCCCCCGTGCAGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS GCA 90 bp AGGACGAGGGCGTCTCTGAGTAGCAGCGGGACCTGGAGGTGTACCTaGACGGGGGCGAGGAATGAGGGCATCATCGCGTGCTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RTRASLSSSGTWRCT*TGARNEGIIACSLG
Trigger: CCCCAGGGAGCACGCGATGATGCCCTCATTCCTCGCCCCCGTGCAGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS CCA 90 bp CCGCGGGTTCCCAGGGCTGGTGGTAGTTGCCGTCCCACACGTACGTaGCGGGGTCCTCGTCAGCGAAGACCTCGCGGAACATGTCGACCA +
Preference number: 5 (lower is better)
Translates to: PRVPRAGGSCRPTRT*RGPRQRRPRGTCRP
Trigger: TGGTCGACATGTTCCGCGAGGTCTTCGCTGACGAGGACCCCGCCACGTACGTGTGGGACGGCAACTACCACCAGCCCTGGGAACCCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CCA 90 bp GCCACCGCAGGAAGGACGAGGGCGTCTCTGAGTAGCAGCGGGACCTaGAGGTGTACCTGCACGGGGGCGAGGAATGAGGGCATCATCGCG +
Preference number: 5 (lower is better)
Translates to: ATAGRTRASLSSSGT*RCTCTGARNEGIIA
Trigger: CGCGATGATGCCCTCATTCCTCGCCCCCGTGCAGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCTTCCTGCGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS-3UTR CAA 90 bp ACAGGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCTGCCACCAGAGCGCGTaGTACAGCCACTCACGGAAG +
Preference number: 5 (lower is better)
Translates to: TGRRPPPRRSSTHGAGATCHQSA*YSHSRK
Trigger: CTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCA...GGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCCTGT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR CAA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCGCCGCGAAGGCCGCCTaGGCCAGTGCCACGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPAAKAA*ASATPC
Trigger: GCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGC...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACGCCGCGAAGGCCGCCTaGGCCAGTGCCACGCCCTGC +
Preference number: 5 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDAAKAA*ASATPC
Trigger: GCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGC...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 90 bp CCCTACCCGGGGGTCCTCGTCCAGTACCCGCACGAGCTCCAGCAGTaGCATGGGGTCCAACCTTGTGTCCGAGTCACAGACCTGCACGTA +
Preference number: 5 (lower is better)
Translates to: PYPGVLVQYPHELQQ*HGVQPCVRVTDLHV
Trigger: TACGTGCAGGTCTGTGACTCGGACACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTGCGGGTACTGGACGAGGACCCCCGGGTAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000594621.1
ENST00000601667.5
ENST00000601714.5
CDS CCA 90 bp CCCGGGGGTCCTCGTCCAGTACCCGCACGAGCTCCAGCAGTGCCATaGGGTCCAACCTTGTGTCCGAGTCACAGACCTGCACGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: PGGPRPVPARAPAVP*GPTLCPSHRPARSP
Trigger: TGGACTACGTGCAGGTCTGTGACTCGGACACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTGCGGGTACTGGACGAGGACCCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000594621.1
ENST00000601667.5
ENST00000601714.5
CDS-3UTR CAA 90 bp ACGACTTGGACCAGCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAGGGCGATGCTGAGCATGCGGTaGGTGAGGTGCCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: TTWTSVSAGSATAGRTRAMLSMR*VRCRSS
Trigger: GGATGACCGGCACCTCACCAACCGCATGCTCAGCAT...CGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CAA 90 bp GGCCGGAGACCACCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGATCACGGAAGTACGACTaGGACCAGCGTGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GRRPPPRRSSTHGAGATRSRKYD*DQRVCW
Trigger: CCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGA...TCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGGTGGTCTCCGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR CAA 90 bp TCCAGACTGAAGAATCTTGGGCTGACCCCCTCGTTTTGCAGAGGAGGGAAACTGGCCGCGAAGGCCGCCTaGGCCAGTGCCACGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SRLKNLGLTPSFCRGGKLAAKAA*ASATPC
Trigger: GCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGC...CAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGCCCAAGATTCTTCAGTCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCTACATGACCTCGCGCTaGCCGCCCCAGCGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPYMTSR*PPQRCA
Trigger: GGCGCAGCGCTGGGGCGGCAAGCGCGAGGTCATGTA...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp CCGCCTCGTAGGTCATCCACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACACCATGGGGTCCAACCTaGTGTCCGAGTCACAGACCT +
Preference number: 5 (lower is better)
Translates to: PPRRSSTHGAGATRARCTPWGPT*CPSHRP
Trigger: AGGTCTGTGACTCGGACACAAGGTTGGACCCCATGG...TGTACAACGCGCTCTGGTGGCACCGGCACCATGCGTGGATGACCTACGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594621.1
ENST00000601667.5
CDS-3UTR CAA 90 bp CACGCATGGTGCCGGTGCCACCAGAGCGCGTTGTACAGCCACTCACGGAAGTACTGCCACCAGAGCGCGTaGTACAGCCACTCACGGAAG +
Preference number: 5 (lower is better)
Translates to: HAWCRCHQSALYSHSRKYCHQSA*YSHSRK
Trigger: CTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCA...GTACTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCACCGGCACCATGCGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS TCA 90 bp GCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGAGGTGTACTTGGTAGCATAACCCAT +
Preference number: 5 (lower is better)
Translates to: ACLLAQPPQEGRGRL*VAAGPGGVLGSITH
Trigger: ATGGGTTATGCTACCAAGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCTACATGACCTCGCGCTaGCCGCCCCAGCGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTYMTSR*PPQRCA
Trigger: GGCGCAGCGCTGGGGCGGCAAGCGCGAGGTCATGTA...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp GAAGTACGACTTGGACCAGCGTGTCTGCTGGCTCAGCCACCGCAGGAAGGACGATCACGGAAGTACGACTaGGACCAGCGTGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: EVRLGPACLLAQPPQEGRSRKYD*DQRVCW
Trigger: CCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGA...TCGTCCTTCCTGCGGTGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGTACTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CAA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCACTAGCGCCAGGAACTaGGCAGGCAGGAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPTSARN*AGRRPH
Trigger: GTGTGGCCTCCTGCCTGCCAAGTTCCTGGCGCTAGT...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp GTACAGCCACTCACGGAAGTACGACTTGGACCAGCGTGTCTGCTGGCTCAGCCACCATGGGGTCCAACCTaGTGTCCGAGTCACAGACCT +
Preference number: 5 (lower is better)
Translates to: VQPLTEVRLGPACLLAQPPWGPT*CPSHRP
Trigger: AGGTCTGTGACTCGGACACAAGGTTGGACCCCATGG...TGGCTGAGCCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGAGTGGCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601667.5
CDS-3UTR CAA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCTGCCACCAGAGCGCGTaGTACAGCCACTCACGGAAG +
Preference number: 5 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPCHQSA*YSHSRK
Trigger: CTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCA...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCACTAGCGCCAGGAACTaGGCAGGCAGGAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPTSARN*AGRRPH
Trigger: GTGTGGCCTCCTGCCTGCCAAGTTCCTGGCGCTAGT...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGCTGCAGGAGTGGGCTaGGGCGCGTCCTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: WRPRSPSPNIVQTEESWAAAGVG*GASCWE
Trigger: CTCCCAGCAGGACGCGCCCAAGCCCACTCCTGCAGC...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601714.5
CDS-3UTR CAA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGTACATGACCTCGCGCTaGCCGCCCCAGCGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQYMTSR*PPQRCA
Trigger: GGCGCAGCGCTGGGGCGGCAAGCGCGAGGTCATGTA...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCATGCTGAGCATGCGGTaGGTGAGGTGCCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPMLSMR*VRCRSS
Trigger: GGATGACCGGCACCTCACCAACCGCATGCTCAGCAT...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp AACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCTGACTCACGGAAGTACGACTaGGACCAGCGTGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: NEEKAGPFPSTPQIPHPDSRKYD*DQRVCW
Trigger: CCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGA...GTCAGGGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp TCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCAGTCCCTCACGGAAGTACGACTaGGACCAGCGTGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SHTLTNKYPPWRPRSPSPSRKYD*DQRVCW
Trigger: CCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGA...GGGACTGGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGGCTGCAGGAGTGGGCTaGGGCGCGTCCTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQAAGVG*GASCCL
Trigger: GAGACAGCAGGACGCGCCCAAGCCCACTCCTGCAGC...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222115.5
CDS-3UTR CAA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCCCATGGGGTCCAACCTaGTGTCCGAGTCACAGACCT +
Preference number: 5 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPPWGPT*CPSHRP
Trigger: AGGTCTGTGACTCGGACACAAGGTTGGACCCCATGG...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp CTCCTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTATGCTGAGCATGCGGTaGGTGAGGTGCCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: LLRSHTLTNKYPPWRPRSMLSMR*VRCRSS
Trigger: GGATGACCGGCACCTCACCAACCGCATGCTCAGCAT...ACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp CTCAGATCCCACACCCTGACCAATAAATACCCTCCCTGGAGACCCAGAAGTCCCGCTGACCCCCTCGTTTaGCAGAGGAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: LRSHTLTNKYPPWRPRSPADPLV*QRRETE
Trigger: CTCAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGC...GGGACTTCTGGGTCTCCAGGGAGGGTATTTATTGGTCAGGGTGTGGGATCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp TGGAGACCCAGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGCTGCAGGAGTGGGCTaGGGCGCGTCCTGTCTCATC +
Preference number: 5 (lower is better)
Translates to: WRPRSPSPNIVQTEESWAAAGVG*GASCLI
Trigger: GATGAGACAGGACGCGCCCAAGCCCACTCCTGCAGC...AGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCTGGGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540069.7
CDS-3UTR CAA 90 bp ATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCACACCCCATGGGGTCCAACCTaGTGTCCGAGTCACAGACCT +
Preference number: 5 (lower is better)
Translates to: IRTRRKQDPFPPLLRSHTPWGPT*CPSHRP
Trigger: AGGTCTGTGACTCGGACACAAGGTTGGACCCCATGG...GGTGTGGGATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCTGCCACCAGAGCGCGTaGTACAGCCACTCACGGAAG +
Preference number: 5 (lower is better)
Translates to: RSPSPNIVQTEESWADPLCHQSA*YSHSRK
Trigger: CTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCA...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp AGAAGTCCCAGTCCCAATATAGTCCAGACTGAAGAATCTTGGGCTGACCCCCTCGCTGACCCCCTCGTTTaGCAGAGGAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: RSPSPNIVQTEESWADPLADPLV*QRRETE
Trigger: CTCAGTTTCCCTCCTCTGCAAAACGAGGGGGTCAGC...GAGGGGGTCAGCCCAAGATTCTTCAGTCTGGACTATATTGGGACTGGGACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATGCTGAGCATGCGGTaGGTGAGGTGCCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQMLSMR*VRCRSS
Trigger: GGATGACCGGCACCTCACCAACCGCATGCTCAGCAT...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGTGCCACCAGAGCGCGTaGTACAGCCACTCACGGAAG +
Preference number: 5 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQCHQSA*YSHSRK
Trigger: CTTCCGTGAGTGGCTGTACAACGCGCTCTGGTGGCA...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCACTAGCGCCAGGAACTaGGCAGGCAGGAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQITSARN*AGRRPH
Trigger: GTGTGGCCTCCTGCCTGCCAAGTTCCTGGCGCTAGT...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp TGGAGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGTCACGGAAGTACGACTaGGACCAGCGTGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: WRLNKNEEKAGPFPSTPQSRKYD*DQRVCW
Trigger: CCAGCAGACACGCTGGTCCAAGTCGTACTTCCGTGA...CTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS-3UTR CAA 90 bp AGATTAAATAAGAACGAGGAGAAAGCAGGACCCTTTCCCTCCACTCCTCAGATCCCATGGGGTCCAACCTaGTGTCCGAGTCACAGACCT +
Preference number: 5 (lower is better)
Translates to: RLNKNEEKAGPFPSTPQIPWGPT*CPSHRP
Trigger: AGGTCTGTGACTCGGACACAAGGTTGGACCCCATGG...GATCTGAGGAGTGGAGGGAAAGGGTCCTGCTTTCTCCTCGTTCTTATTTAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 72 bp TCCAGCGGCCCCCGCGCCGCCGCCGCCACCCGCCGGTaGTCCAGGTACGCGAAGAGGCTCTGCGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: SSGPRAAAATRR*SRYAKRLCATR
Trigger: CCTGGTGGCGCAGAGCCTCTTCGCGTACCTGGAGCACCGGCGGGTGGCGGCGGCGGCGCGGGGGCCGCTGGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CCA 72 bp GCAGGCAGCCCCGCAGCCAGGCCGCGAAGGCCGCCTTaGCCAGTGCCACGCCCTGCACGCACAGCAGCACCC +
Preference number: 6 (lower is better)
Translates to: AGSPAARPRRPP*PVPRPARTAAP
Trigger: GGGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGGCTGCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CAA 72 bp CGCAGGCAGCCCCGCAGCCAGGCCGCGAAGGCCGCCTaGGCCAGTGCCACGCCCTGCACGCACAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: RRQPRSQAAKAA*ASATPCTHSST
Trigger: GGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGGCTGCCTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 72 bp GGTCCTCCTGGTAGGCGGAGATGGTCAGCGCCACACTaGGCGCGGTGGCTGCATCCAGCGGCCCCCGCGCCG +
Preference number: 6 (lower is better)
Translates to: GPPGRRRWSAPH*ARWLHPAAPAP
Trigger: CGGCGCGGGGGCCGCTGGATGCAGCCACCGCGCGCAGTGTGGCGCTGACCATCTCCGCCTACCAGGAGGACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 72 bp GCCCCGCAGCCAGGCCGCGAAGGCCGCCTTGGCCAGTaGCACGCCCTGCACGCACAGCAGCACCCACAGCAG +
Preference number: 6 (lower is better)
Translates to: APQPGREGRLGQ*HALHAQQHPQQ
Trigger: CTGCTGTGGGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CCA 72 bp CCTCGGCTGCGCGGGAAGGGCCGCTCCAGTCGGCCCTaGCCTCGTGTGCTACGCTGCGGACCAGGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: PRLRGKGRSSRP*PRVLRCGPGPQ
Trigger: TTGGGGGCCTGGTCCGCAGCGTAGCACACGAGGCCAGGGCCGACTGGAGCGGCCCTTCCCGCGCAGCCGAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CAA 90 bp AGCACCATGCGCAGGCAGCCCCGCAGCCAGGCCGCGAAGGCCGCCTaGGCCAGTGCCACGCCCTGCACGCACAGCAGCACCCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: STMRRQPRSQAAKAA*ASATPCTHSSTHSS
Trigger: GCTGCTGTGGGTGCTGCTGTGCGTGCAGGGCGTGGCACTGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGGCTGCCTGCGCATGGTGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 72 bp GCACACGCACCTGCGAGTCCTCACCAGCGCCTCCACTaGCAGCCGCCCAGGATCCTCCGCCTCCACCTCCCG +
Preference number: 6 (lower is better)
Translates to: AHAPASPHQRLH*QPPRILRLHLP
Trigger: CGGGAGGTGGAGGCGGAGGATCCTGGGCGGCTGGCAGTGGAGGCGCTGGTGAGGACTCGCAGGTGCGTGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000594621.1
ENST00000601714.5
CDS CCA 72 bp AAAGCCTCCGCACGCCCACCCAGTACAGCGTCAACATaGCCACCCAGTAGCCCACGTAGGCGCCGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: KASARPPSTAST*PPSSPRRRRPP
Trigger: CGGGGGCCGGCGCCTACGTGGGCTACTGGGTGGCCATGTTGACGCTGTACTGGGTGGGCGTGCGGAGGCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CCA 72 bp TGGCCTCCCCTGAAGACCCTTGAGGCGGCATCCGCGTaGCTGGACTCACACCTGGACGCGGTAGCCCCCGGT +
Preference number: 6 (lower is better)
Translates to: WPPLKTLEAASA*LDSHLDAVAPG
Trigger: ACCGGGGGCTACCGCGTCCAGGTGTGAGTCCAGCCACGCGGATGCCGCCTCAAGGGTCTTCAGGGGAGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS CCA 72 bp CGGCAGGCTGCAGGAGTGGGCTTGGGCGCGTCCTGCTaGGAGCGAGAGGGGAAAGGAAGGGGCATGAGTCCC +
Preference number: 6 (lower is better)
Translates to: RQAAGVGLGASC*EREGKGRGMSP
Trigger: GGGACTCATGCCCCTTCCTTTCCCCTCTCGCTCCCAGCAGGACGCGCCCAAGCCCACTCCTGCAGCCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601714.5
CDS GCA 72 bp CAGCGGCAGGCTGCAGGAGTGGGCTTGGGCGCGTCCTaGTGGGAGCGAGAGGGGAAAGGAAGGGGCATGAGT +
Preference number: 6 (lower is better)
Translates to: QRQAAGVGLGAS*WEREGKGRGMS
Trigger: ACTCATGCCCCTTCCTTTCCCCTCTCGCTCCCAGCAGGACGCGCCCAAGCCCACTCCTGCAGCCTGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601714.5
CDS CCA 72 bp CCCAAGGGCGGCCCGCGTAGAACAGACGCAGCACAGTaGCCGCCACGAAGAAGGGGAACAGGCCGGAGACCA +
Preference number: 6 (lower is better)
Translates to: PKGGPRRTDAAQ*PPRRRGTGRRP
Trigger: TGGTCTCCGGCCTGTTCCCCTTCTTCGTGGCGGCCACTGTGCTGCGTCTGTTCTACGCGGGCCGCCCTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS TCA 72 bp CAGGTACGCGAAGAGGCTCTGCGCCACCAGGTGCGCTaGAAGGAAGGCCCCGTAGAGGCCGAAGGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: QVREEALRHQVR*KEGPVEAEGQE
Trigger: CTCCTGGCCTTCGGCCTCTACGGGGCCTTCCTTTCAGCGCACCTGGTGGCGCAGAGCCTCTTCGCGTACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS TCA 72 bp CCCAGCAGCTCTCCTCTGGCCTCCCCTGAAGACCCTTaGGGCGGCATCCGCGTGGCTGGACTCACACCTGGA +
Preference number: 6 (lower is better)
Translates to: PSSSPLASPEDP*GGIRVAGLTPG
Trigger: TCCAGGTGTGAGTCCAGCCACGCGGATGCCGCCTCAAGGGTCTTCAGGGGAGGCCAGAGGAGAGCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS TCA 72 bp CTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGAGGTGTACCTGCACGG +
Preference number: 6 (lower is better)
Translates to: LAQPPQEGRGRL*VAAGPGGVPAR
Trigger: CCGTGCAGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS CCA 72 bp CCCAGGGCTGGTGGTAGTTGCCGTCCCACACGTACGTaGCGGGGTCCTCGTCAGCGAAGACCTCGCGGAACA +
Preference number: 6 (lower is better)
Translates to: PRAGGSCRPTRT*RGPRQRRPRGT
Trigger: TGTTCCGCGAGGTCTTCGCTGACGAGGACCCCGCCACGTACGTGTGGGACGGCAACTACCACCAGCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000594621.1
ENST00000601714.5
CDS CCA 72 bp TGGGCTTGGGCGCGTCCTGTCTCATCGCAGTGGGTCTaGCCGGGCTCTCTCTTCTCTCCGGCTTGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: WAWARPVSSQWV*PGSLFSPACSP
Trigger: GGGAGAGCAAGCCGGAGAGAAGAGAGAGCCCGGCCAGACCCACTGCGATGAGACAGGACGCGCCCAAGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540069.7
CDS CCA 72 bp GGAAGGACGAGGGCGTCTCTGAGTAGCAGCGGGACCTaGAGGTGTACCTGCACGGGGGCGAGGAATGAGGGC +
Preference number: 6 (lower is better)
Translates to: GRTRASLSSSGT*RCTCTGARNEG
Trigger: GCCCTCATTCCTCGCCCCCGTGCAGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS GCA 72 bp GCGTCTCTGAGTAGCAGCGGGACCTGGAGGTGTACCTaGACGGGGGCGAGGAATGAGGGCATCATCGCGTGC +
Preference number: 6 (lower is better)
Translates to: ASLSSSGTWRCT*TGARNEGIIAC
Trigger: GCACGCGATGATGCCCTCATTCCTCGCCCCCGTGCAGGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594621.1
CDS TCA 72 bp CTGGCTCAGCCACCGCAGGAAGGACGAGGGCGTCTCTaGGTAGCAGCGGGACCTGGAGGTGTACTTGGTAGC +
Preference number: 6 (lower is better)
Translates to: LAQPPQEGRGRL*VAAGPGGVLGS
Trigger: GCTACCAAGTACACCTCCAGGTCCCGCTGCTACTCAGAGACGCCCTCGTCCTTCCTGCGGTGGCTGAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601714.5
CDS GCA 72 bp GGGGTCCTCGTCCAGTACCCGCACGAGCTCCAGCAGTaGCATGGGGTCCAACCTTGTGTCCGAGTCACAGAC +
Preference number: 6 (lower is better)
Translates to: GVLVQYPHELQQ*HGVQPCVRVTD
Trigger: GTCTGTGACTCGGACACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTGCGGGTACTGGACGAGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000594621.1
ENST00000601667.5
ENST00000601714.5
CDS CAA 72 bp CCCGCACGAGCTCCAGCAGTGCCATGGGGTCCAACCTaGTGTCCGAGTCACAGACCTGCACGTAGTCCACCG +
Preference number: 6 (lower is better)
Translates to: PARAPAVPWGPT*CPSHRPARSPP
Trigger: CGGTGGACTACGTGCAGGTCTGTGACTCGGACACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000594621.1
ENST00000601667.5
ENST00000601714.5
CDS CCA 72 bp CCTCGTCCAGTACCCGCACGAGCTCCAGCAGTGCCATaGGGTCCAACCTTGTGTCCGAGTCACAGACCTGCA +
Preference number: 6 (lower is better)
Translates to: PRPVPARAPAVP*GPTLCPSHRPA
Trigger: TGCAGGTCTGTGACTCGGACACAAGGTTGGACCCCATGGCACTGCTGGAGCTCGTGCGGGTACTGGACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000594621.1
ENST00000601667.5
ENST00000601714.5
CDS CCA 72 bp TCATCCCCAAAAGTACAGTGGGTACCCAGGAACTTCTaGTTGTACCAGGCCTCAAGAAACTGCTGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: SSPKVQWVPRNF*LYQASRNCCKR
Trigger: CCTCTTGCAGCAGTTTCTTGAGGCCTGGTACAACCAGAAGTTCCTGGGTACCCACTGTACTTTTGGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222115.5
ENST00000540069.7
ENST00000601667.5
ENST00000601714.5