Pregenerated sensors for HAR1A (Homo sapiens)
Ensembl gene IDs: ENSG00000225978Ensembl transcript IDs: ENST00000433161.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGAAAGCCCAGGCCGGCCCCAGCCCACGGCGCTCGCGCCCACCGTaGCGCGCGGGCCACCGCCCACCCGGGGGCTGGTTAGAAACGCGG | + |
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Preference number: 5 (lower is better) Translates to: LKAQAGPSPRRSRPP*RAGHRPPGGWLETR Trigger: CCGCGTTTCTAACCAGCCCCCGGGTGGGCGGTGGCCCGCGCGGCACGGTGGGCGCGAGCGCCGTGGGCTGGGGCCGGCCTGGGCTTTCAG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 90 bp | GGCTCCGCGCCGCTGACCTCGGCACGCCGCGGGCCTTCCTCCTCTTaGGGACCGGAGGGAGAGCCGGGCGCAGAGACCGAGGCACAGTCG | + |
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Preference number: 5 (lower is better) Translates to: GSAPLTSARRGPSSS*GPEGEPGAETEAQS Trigger: CGACTGTGCCTCGGTCTCTGCGCCCGGCTCTCCCTCCGGTCCGCAAGAGGAGGAAGGCCCGCGGCGTGCCGAGGTCAGCGGCGCGGAGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 90 bp | GGCCTCGGTGACCTCGGTTCAGGCGTCCGTGACCGTCTCGCCTGGTaGCTCCGCGCCGCTGACCTCGGCACGCCGCGGGCCTTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GLGDLGSGVRDRLAW*LRAADLGTPRAFLL Trigger: GAGGAGGAAGGCCCGCGGCGTGCCGAGGTCAGCGGCGCGGAGCCACCAGGCGAGACGGTCACGGACGCCTGAACCGAGGTCACCGAGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 90 bp | CGTGGCCTCGGTGACCTCGGTTCAGGCGTCCGTGACCGTCTCGCCTaGTGGCTCCGCGCCGCTGACCTCGGCACGCCGCGGGCCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RGLGDLGSGVRDRLA*WLRAADLGTPRAFL Trigger: GAGGAAGGCCCGCGGCGTGCCGAGGTCAGCGGCGCGGAGCCACCAGGCGAGACGGTCACGGACGCCTGAACCGAGGTCACCGAGGCCACG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 90 bp | GCCGGCTCAGCCTCCATCAGAAGCGGCAGCTCTGATTGGCCACCGTaGACCGCGTGGAGCGCCGTTCCTCGCAGCGAGTTCATGAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: AGSASIRSGSSDWPP*TAWSAVPRSEFMRH Trigger: ATGCCTCATGAACTCGCTGCGAGGAACGGCGCTCCACGCGGTGCACGGTGGCCAATCAGAGCTGCCGCTTCTGATGGAGGCTGAGCCGGC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 90 bp | TCCTGCTGCCGGTGCCTGACCCAGATCAGGGATTCCAAACACCCATaGGGCCCCTGGTCCCGCCCTGAAGCCAATTCCAGCTGCCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SCCRCLTQIRDSKHP*GPWSRPEANSSCPQ Trigger: CTGGGGGCAGCTGGAATTGGCTTCAGGGCGGGACCAGGGGCCCCATGGGTGTTTGGAATCCCTGATCTGGGTCAGGCACCGGCAGCAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS TCA 90 bp | GACACACCAGAGTCCAGGCCAGGCTGGAATCCTGCTGCCGGTGCCTaGCCCAGATCAGGGATTCCAAACACCCATGGGGCCCCTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: DTPESRPGWNPAAGA*PRSGIPNTHGAPGP Trigger: GGGACCAGGGGCCCCATGGGTGTTTGGAATCCCTGATCTGGGTCAGGCACCGGCAGCAGGATTCCAGCCTGGCCTGGACTCTGGTGTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 90 bp | ACGGGACACACCAGAGTCCAGGCCAGGCTGGAATCCTGCTGCCGGTaGCTGACCCAGATCAGGGATTCCAAACACCCATGGGGCCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TGHTRVQARLESCCR*LTQIRDSKHPWGPW Trigger: CCAGGGGCCCCATGGGTGTTTGGAATCCCTGATCTGGGTCAGGCACCGGCAGCAGGATTCCAGCCTGGCCTGGACTCTGGTGTGTCCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 90 bp | GAGGTCCTGGGGGTAACCTGGGTGCTCAAGGCTCGCTCTGTGTGTTaGCACCTCCGTTTGCACCCAGACCCTCCTGTGACGTGGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: EVLGVTWVLKARSVC*HLRLHPDPPVTWLS Trigger: GCTGAGCCACGTCACAGGAGGGTCTGGGTGCAAACGGAGGTGGCAACACACAGAGCGAGCCTTGAGCACCCAGGTTACCCCCAGGACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 90 bp | GCCTCCATCAGAAGCGGCAGCTCTGATTGGCCACCGTGCACCGCGTaGAGCGCCGTTCCTCGCAGCGAGTTCATGAGGCATTTCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASIRSGSSDWPPCTA*SAVPRSEFMRHFTG Trigger: CCCAGTGAAATGCCTCATGAACTCGCTGCGAGGAACGGCGCTCCACGCGGTGCACGGTGGCCAATCAGAGCTGCCGCTTCTGATGGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 90 bp | GACAGCAGGAGCCCCCAAGCCAGACTGGAGGTCCTGGGGGTAACCTaGGTGCTCAAGGCTCGCTCTGTGTGTTGCCACCTCCGTTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: DSRSPQARLEVLGVT*VLKARSVCCHLRLH Trigger: GTGCAAACGGAGGTGGCAACACACAGAGCGAGCCTTGAGCACCCAGGTTACCCCCAGGACCTCCAGTCTGGCTTGGGGGCTCCTGCTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 90 bp | CTTGCCCTGGCTGCAGAACGCAGCTTAATTACATGGTCTGCGGGTTaGGGCCCTGAGCGAGGCTGGGGCTGGTTCTTGGCCAAGACGCCT | + |
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Preference number: 5 (lower is better) Translates to: LALAAERSLITWSAG*GPERGWGWFLAKTP Trigger: AGGCGTCTTGGCCAAGAACCAGCCCCAGCCTCGCTCAGGGCCCCAACCCGCAGACCATGTAATTAAGCTGCGTTCTGCAGCCAGGGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 90 bp | CTTCAAACGGGACACACCAGAGTCCAGGCCAGGCTGGAATCCTGCTaGCGGTGCCTGACCCAGATCAGGGATTCCAAACACCCATGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LQTGHTRVQARLESC*RCLTQIRDSKHPWG Trigger: GCCCCATGGGTGTTTGGAATCCCTGATCTGGGTCAGGCACCGGCAGCAGGATTCCAGCCTGGCCTGGACTCTGGTGTGTCCCGTTTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 90 bp | AGAGCTGAGACTCTTGCCCTGGCTGCAGAACGCAGCTTAATTACATaGTCTGCGGGTTGGGGCCCTGAGCGAGGCTGGGGCTGGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: RAETLALAAERSLIT*SAGWGPERGWGWFL Trigger: CAAGAACCAGCCCCAGCCTCGCTCAGGGCCCCAACCCGCAGACCATGTAATTAAGCTGCGTTCTGCAGCCAGGGCAAGAGTCTCAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 90 bp | TTTCTTCAAACGGGACACACCAGAGTCCAGGCCAGGCTGGAATCCTaGTGCCGGTGCCTGACCCAGATCAGGGATTCCAAACACCCATGG | + |
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Preference number: 5 (lower is better) Translates to: FLQTGHTRVQARLES*CRCLTQIRDSKHPW Trigger: CCATGGGTGTTTGGAATCCCTGATCTGGGTCAGGCACCGGCAGCAGGATTCCAGCCTGGCCTGGACTCTGGTGTGTCCCGTTTGAAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 90 bp | TCTAAAGGTCAAGGGTCTCTGACCAGGTGGAGCAGAGCACGTGACTaGGCAGCTCTTCTCTGCCTGGAACGCCCATCTTCTGTCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SKGQGSLTRWSRARD*AALLCLERPSSVLR Trigger: CCTCAAGACAGAAGATGGGCGTTCCAGGCAGAGAAGAGCTGCCCAGTCACGTGCTCTGCTCCACCTGGTCAGAGACCCTTGACCTTTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS TCA 90 bp | CTCGCTCTGTGTGTTGCCACCTCCGTTTGCACCCAGACCCTCCTGTaGCGTGGCTCAGCAAACCTCTTAAATGGGTCATTGGATGCTAAA | + |
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Preference number: 5 (lower is better) Translates to: LALCVATSVCTQTLL*RGSANLLNGSLDAK Trigger: TTTAGCATCCAATGACCCATTTAAGAGGTTTGCTGAGCCACGTCACAGGAGGGTCTGGGTGCAAACGGAGGTGGCAACACACAGAGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 72 bp | CCGCTGACCTCGGCACGCCGCGGGCCTTCCTCCTCTTaGGGACCGGAGGGAGAGCCGGGCGCAGAGACCGAG | + |
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Preference number: 6 (lower is better) Translates to: PLTSARRGPSSS*GPEGEPGAETE Trigger: CTCGGTCTCTGCGCCCGGCTCTCCCTCCGGTCCGCAAGAGGAGGAAGGCCCGCGGCGTGCCGAGGTCAGCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | GGTGACCTCGGTTCAGGCGTCCGTGACCGTCTCGCCTaGTGGCTCCGCGCCGCTGACCTCGGCACGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: GDLGSGVRDRLA*WLRAADLGTPR Trigger: CCGCGGCGTGCCGAGGTCAGCGGCGCGGAGCCACCAGGCGAGACGGTCACGGACGCCTGAACCGAGGTCACC 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CAA 72 bp | GCCGCTGACCTCGGCACGCCGCGGGCCTTCCTCCTCTaGCGGACCGGAGGGAGAGCCGGGCGCAGAGACCGA | + |
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Preference number: 6 (lower is better) Translates to: AADLGTPRAFLL*RTGGRAGRRDR Trigger: TCGGTCTCTGCGCCCGGCTCTCCCTCCGGTCCGCAAGAGGAGGAAGGCCCGCGGCGTGCCGAGGTCAGCGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CAA 90 bp | TGGCTCCGCGCCGCTGACCTCGGCACGCCGCGGGCCTTCCTCCTCTaGCGGACCGGAGGGAGAGCCGGGCGCAGAGACCGAGGCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: WLRAADLGTPRAFLL*RTGGRAGRRDRGTV Trigger: GACTGTGCCTCGGTCTCTGCGCCCGGCTCTCCCTCCGGTCCGCAAGAGGAGGAAGGCCCGCGGCGTGCCGAGGTCAGCGGCGCGGAGCCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | TTAAGTGGCAGCGTCCACTGCGTGGGGCCCGAGCTGTaGGGCCTCTTCCGTCTCCCGGAGCCCAACCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LSGSVHCVGPEL*GLFRLPEPNRG Trigger: CCCGCGGTTGGGCTCCGGGAGACGGAAGAGGCCCCACAGCTCGGGCCCCACGCAGTGGACGCTGCCACTTAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 72 bp | GCCTCCATCAGAAGCGGCAGCTCTGATTGGCCACCGTaGACCGCGTGGAGCGCCGTTCCTCGCAGCGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ASIRSGSSDWPP*TAWSAVPRSEF Trigger: GAACTCGCTGCGAGGAACGGCGCTCCACGCGGTGCACGGTGGCCAATCAGAGCTGCCGCTTCTGATGGAGGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS TCA 72 bp | GAGTCCAGGCCAGGCTGGAATCCTGCTGCCGGTGCCTaGCCCAGATCAGGGATTCCAAACACCCATGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ESRPGWNPAAGA*PRSGIPNTHGA Trigger: GGCCCCATGGGTGTTTGGAATCCCTGATCTGGGTCAGGCACCGGCAGCAGGATTCCAGCCTGGCCTGGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | AGAAGCGGCAGCTCTGATTGGCCACCGTGCACCGCGTaGAGCGCCGTTCCTCGCAGCGAGTTCATGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RSGSSDWPPCTA*SAVPRSEFMRH Trigger: ATGCCTCATGAACTCGCTGCGAGGAACGGCGCTCCACGCGGTGCACGGTGGCCAATCAGAGCTGCCGCTTCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | CGGTGCCTGACCCAGATCAGGGATTCCAAACACCCATaGGGCCCCTGGTCCCGCCCTGAAGCCAATTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RCLTQIRDSKHP*GPWSRPEANSS Trigger: GCTGGAATTGGCTTCAGGGCGGGACCAGGGGCCCCATGGGTGTTTGGAATCCCTGATCTGGGTCAGGCACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CAA 90 bp | GGAGGTCCTGGGGGTAACCTGGGTGCTCAAGGCTCGCTCTGTGTGTaGCCACCTCCGTTTGCACCCAGACCCTCCTGTGACGTGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GGPGGNLGAQGSLCV*PPPFAPRPSCDVAQ Trigger: CTGAGCCACGTCACAGGAGGGTCTGGGTGCAAACGGAGGTGGCAACACACAGAGCGAGCCTTGAGCACCCAGGTTACCCCCAGGACCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | GCTGCAGAACGCAGCTTAATTACATGGTCTGCGGGTTaGGGCCCTGAGCGAGGCTGGGGCTGGTTCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: AAERSLITWSAG*GPERGWGWFLA Trigger: GGCCAAGAACCAGCCCCAGCCTCGCTCAGGGCCCCAACCCGCAGACCATGTAATTAAGCTGCGTTCTGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CAA 72 bp | GGGGGTAACCTGGGTGCTCAAGGCTCGCTCTGTGTGTaGCCACCTCCGTTTGCACCCAGACCCTCCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: GGNLGAQGSLCV*PPPFAPRPSCD Trigger: GTCACAGGAGGGTCTGGGTGCAAACGGAGGTGGCAACACACAGAGCGAGCCTTGAGCACCCAGGTTACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS GCA 72 bp | ACGGGACACACCAGAGTCCAGGCCAGGCTGGAATCCTaGTGCCGGTGCCTGACCCAGATCAGGGATTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TGHTRVQARLES*CRCLTQIRDSK Trigger: TTTGGAATCCCTGATCTGGGTCAGGCACCGGCAGCAGGATTCCAGCCTGGCCTGGACTCTGGTGTGTCCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | GGCACCCGCCTTGACATCAATTACGCCAAAATTAAGTaGCAGCGTCCACTGCGTGGGGCCCGAGCTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GTRLDINYAKIK*QRPLRGARAVG Trigger: CCCCACAGCTCGGGCCCCACGCAGTGGACGCTGCCACTTAATTTTGGCGTAATTGATGTCAAGGCGGGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | AATGGGACCACAGGAACCCAAAAAGCTACAGCTGGGTaGCCAGGTCCACCATCCACGCCCTCAGGTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: NGTTGTQKATAG*PGPPSTPSGPP Trigger: TGGTGGACCTGAGGGCGTGGATGGTGGACCTGGCCACCCAGCTGTAGCTTTTTGGGTTCCTGTGGTCCCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CAA 90 bp | GTAACCTGGGTGCTCAAGGCTCGCTCTGTGTGTTGCCACCTCCGTTaGCACCCAGACCCTCCTGTGACGTGGCTCAGCAAACCTCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: VTWVLKARSVCCHLR*HPDPPVTWLSKPLK Trigger: TTTAAGAGGTTTGCTGAGCCACGTCACAGGAGGGTCTGGGTGCAAACGGAGGTGGCAACACACAGAGCGAGCCTTGAGCACCCAGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | TGCCACCTCCGTTTGCACCCAGACCCTCCTGTGACGTaGCTCAGCAAACCTCTTAAATGGGTCATTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: CHLRLHPDPPVT*LSKPLKWVIGC Trigger: GCATCCAATGACCCATTTAAGAGGTTTGCTGAGCCACGTCACAGGAGGGTCTGGGTGCAAACGGAGGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS TCA 72 bp | TGTGTTGCCACCTCCGTTTGCACCCAGACCCTCCTGTaGCGTGGCTCAGCAAACCTCTTAAATGGGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: CVATSVCTQTLL*RGSANLLNGSL Trigger: CAATGACCCATTTAAGAGGTTTGCTGAGCCACGTCACAGGAGGGTCTGGGTGCAAACGGAGGTGGCAACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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| CDS CCA 72 bp | GAGGCAGAAAAATCTATTTTAGAGGGTTTCCAGGCCTaGCTCCTCAGAGGTGCGGGAAGATGTTCAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EAEKSILEGFQA*LLRGAGRCSEL Trigger: CAGCTCTGAACATCTTCCCGCACCTCTGAGGAGCCAGGCCTGGAAACCCTCTAAAATAGATTTTTCTGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433161.1 |
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