RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAPLN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000187664

Ensembl transcript IDs: ENST00000291481.8, ENST00000592862.2

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTGGTCTCAGGAGGCGTGGCCAGTCTTCAGGAGCCTGCGGGTTCTaGTGGCCTCCTGAGGTCCTCAGGGGGCGTGACCCTCATGGAGAA +
Preference number: 1 (lower is better)
Translates to: SGLRRRGQSSGACGF*WPPEVLRGRDPHGE
Trigger: TTCTCCATGAGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCCGCAGGCTCCTGAAGACTGGCCACGCCTCCTGAGACCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 90 bp CTGTTTCCAAGTGGTCTCAGGAGGCGTGGCCAGTCTTCAGGAGCCTaGGGGTTCTGCTGGCCTCCTGAGGTCCTCAGGGGGCGTGACCCT +
Preference number: 1 (lower is better)
Translates to: LFPSGLRRRGQSSGA*GFCWPPEVLRGRDP
Trigger: AGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCCGCAGGCTCCTGAAGACTGGCCACGCCTCCTGAGACCACTTGGAAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 90 bp GGTCTCAGGAGGCGTGGCCAGTCTTCAGGAGCCTGCGGGTTCTGCTaGCCTCCTGAGGTCCTCAGGGGGCGTGACCCTCATGGAGAAAGT +
Preference number: 1 (lower is better)
Translates to: GLRRRGQSSGACGFC*PPEVLRGRDPHGES
Trigger: ACTTTCTCCATGAGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCCGCAGGCTCCTGAAGACTGGCCACGCCTCCTGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 90 bp GTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTCCAAGTaGTCTCAGGAGGCGTGGCCAGTCTTCAGGAGCCTGCGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: VQPPGDHGGSWSVSK*SQEAWPVFRSLRVL
Trigger: CAGAACCCGCAGGCTCCTGAAGACTGGCCACGCCTCCTGAGACCACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 90 bp CCAGAGTTTGGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTaGGGGTGGAGCATGGAGGGTGGTCTGGAACTGGAGTGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: PEFGHHGNSGGVQTA*GWSMEGGLELEWAW
Trigger: CCAGGCCCACTCCAGTTCCAGACCACCCTCCATGCTCCACCCCCAGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 90 bp TGGCCTCCTGAGGTCCTCAGGGGGCGTGACCCTCATGGAGAAAGTTaGGGAGTTGGGGGAATCCTCTATCCAGAAGAGGTGAGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: WPPEVLRGRDPHGES*GVGGILYPEEVRAG
Trigger: GCCAGCCCTCACCTCTTCTGGATAGAGGATTCCCCCAACTCCCCAACTTTCTCCATGAGGGTCACGCCCCCTGAGGACCTCAGGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 90 bp CCCAGTGTCCCACGTGACCGCAAGGGACTAGTGTTCAGTCTCCAGTaGGATGCAGAAGGTGTACGGCCGGTCTCTAGTCAATCCCGGGGG +
Preference number: 1 (lower is better)
Translates to: PSVPRDRKGLVFSLQ*DAEGVRPVSSQSRG
Trigger: CCCCCGGGATTGACTAGAGACCGGCCGTACACCTTCTGCATCTCACTGGAGACTGAACACTAGTCCCTTGCGGTCACGTGGGACACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 90 bp CTTACCGGTCCCCAGGCCTGGGAAGATGGTCTGTTTGGTGACAGTTaGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCA +
Preference number: 1 (lower is better)
Translates to: LTGPQAWEDGLFGDS*ERDVRGQGGFALPS
Trigger: TGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGCCTGGGGACCGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 90 bp CATGGATCTTACCGGTCCCCAGGCCTGGGAAGATGGTCTGTTTGGTaGCAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCT +
Preference number: 1 (lower is better)
Translates to: HGSYRSPGLGRWSVW*QLGKGRQRTGWVCS
Trigger: AGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGCCTGGGGACCGGTAAGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 90 bp CACGCCATAGGCTCGGTTTCCTCATTTGTAGGACGACGACAAACATaGCCGGGTGTTGCAAGATTGTCTCGTGCACAGCTGCTATCCGGC +
Preference number: 1 (lower is better)
Translates to: HAIGSVSSFVGRRQT*PGVARLSRAQLLSG
Trigger: GCCGGATAGCAGCTGTGCACGAGACAATCTTGCAACACCCGGGCATGTTTGTCGTCGTCCTACAAATGAGGAAACCGAGCCTATGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 90 bp TGTAGGACGACGACAAACATGCCCGGGTGTTGCAAGATTGTCTCGTaGACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGT +
Preference number: 1 (lower is better)
Translates to: CRTTTNMPGCCKIVS*TAAIRHRVNVQTEG
Trigger: ACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTTGCAACACCCGGGCATGTTTGTCGTCGTCCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 90 bp AGAATGGAGATGGGGTCTCAGAGGACAAAAGAGGAGCTCAGTGCTTaGATATCTCAACAGACCAGGGCACGCCATAGGCTCGGTTTCCTC +
Preference number: 1 (lower is better)
Translates to: RMEMGSQRTKEELSA*ISQQTRARHRLGFL
Trigger: GAGGAAACCGAGCCTATGGCGTGCCCTGGTCTGTTGAGATATGCAAGCACTGAGCTCCTCTTTTGTCCTCTGAGACCCCATCTCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 90 bp CTGCTCTGCATAACTAGTGACATGGATCTTACCGGTCCCCAGGCCTaGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGA +
Preference number: 1 (lower is better)
Translates to: LLCITSDMDLTGPQA*EDGLFGDSWERDVR
Trigger: TCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGCCTGGGGACCGGTAAGATCCATGTCACTAGTTATGCAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 90 bp AATTTCATGCCCTGGATCTTGTCAATGACCCAGTCAGGACAGAGTTaGCAAGGAGCAGACCCATGGTGGGTGGCTAAAGGGAGACAGTGG +
Preference number: 1 (lower is better)
Translates to: NFMPWILSMTQSGQS*QGADPWWVAKGRQW
Trigger: CCACTGTCTCCCTTTAGCCACCCACCATGGGTCTGCTCCTTGTCAACTCTGTCCTGACTGGGTCATTGACAAGATCCAGGGCATGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 90 bp CTCGGTTTCCTCATTTGTAGGACGACGACAAACATGCCCGGGTGTTaGAAGATTGTCTCGTGCACAGCTGCTATCCGGCATAGAGTTAAC +
Preference number: 1 (lower is better)
Translates to: LGFLICRTTTNMPGC*KIVSCTAAIRHRVN
Trigger: GTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTTGCAACACCCGGGCATGTTTGTCGTCGTCCTACAAATGAGGAAACCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 90 bp CCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTTTGTCACTTaGTCACACAGTGAGCAAGAAGAGGCAGAATTCAAACCCAAACCG +
Preference number: 1 (lower is better)
Translates to: PWYSGRTQVQKEFVT*SHSEQEEAEFKPKP
Trigger: CGGTTTGGGTTTGAATTCTGCCTCTTCTTGCTCACTGTGTGACCAAGTGACAAACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 90 bp CTAGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTaGGTCTGTTTCCAAGTGGTCTCAGGAGGCGTGGCCAGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: LVNPGGPATRRPRGQ*VCFQVVSGGVASLQ
Trigger: CTGAAGACTGGCCACGCCTCCTGAGACCACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGTGGTCTCAGGAGGCGTaGCCAGTCTTCAGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: GCWVTLATASGRVISMAVWSQEA*PVFRSL
Trigger: CAGGCTCCTGAAGACTGGCCACGCCTCCTGAGACCA...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTGGACCACAGGGAATGTaGCCAGTGTCCAGGGCTTCA +
Preference number: 2 (lower is better)
Translates to: SQSRGSSHQATTGAVGLFGPQGM*PVSRAS
Trigger: TGAAGCCCTGGACACTGGCCACATTCCCTGTGGTCC...AAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp GCACTCACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGCCCACAACCTCCATGTaGCCACGGGGAGTGACCCTG +
Preference number: 2 (lower is better)
Translates to: ALTGTTEQPWYSGRTQVQPTTSM*PRGVTL
Trigger: CAGGGTCACTCCCCGTGGTCACATGGAGGTTGTGGG...CTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp GCACTCACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGGTGGCCCCCAGTAAGTaGGCCAGCTGGCTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: ALTGTTEQPWYSGRTQVQVAPSK*ASWLCV
Trigger: GACACACAGCCAGCTGGCTCACTTACTGGGGGCCAC...CTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGCTGAGGGGTGGGACGTaGCCCCCAGTAAGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: RTGCWVTLATASGRVISMLRGGT*PPVSEP
Trigger: TGGCTCACTTACTGGGGGCCACGTCCCACCCCTCAG...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTGGGACAGCCAGAAGTTaGGGTGGAGGTCTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTGTARS*GGGLWG
Trigger: ACCCCAGAGACCTCCACCTCAACTTCTGGCTGTCCC...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTAGGGCTCTAGACCAGTaGTCAAGCGCCCTGGCTGTC +
Preference number: 2 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTRALDQ*SSALAV
Trigger: GACAGCCAGGGCGCTTGACCACTGGTCTAGAGCCCT...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTGCCTGCGGGTTCTGCTaGCCTCCTGAGGTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCACGFC*PPEVLR
Trigger: CCTGAGGACCTCAGGAGGCCAGCAGAACCCGCAGGC...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp GCACTCACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGGTGGAGCATGGAGGGTaGTCTGGAACTGGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: ALTGTTEQPWYSGRTQVQVEHGG*SGTGVG
Trigger: GCCCACTCCAGTTCCAGACCACCCTCCATGCTCCAC...CTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTCCTGGGGGTGGAGCATaGAGGGTGGTCTGGAACTGG +
Preference number: 2 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSPGGGA*RVVWNW
Trigger: CCAGTTCCAGACCACCCTCCATGCTCCACCCCCAGG...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTGGGGTCCAAACCGCCTaGGGGTGGAGCATGGAGGGT +
Preference number: 2 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCGVQTA*GWSMEG
Trigger: ACCCTCCATGCTCCACCCCCAGGCGGTTTGGACCCC...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTTCTATCCAGAAGAGGTaGGGGCTGGCCAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSSIQKR*GLARLQ
Trigger: CTGGAGCCTGGCCAGCCCTCACCTCTTCTGGATAGA...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTGACTGGTTGCCTTGGTaGCAGTGGGACCCAAGGCAA +
Preference number: 2 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTDWLPW*QWDPRQ
Trigger: TTGCCTTGGGTCCCACTGTCACCAAGGCAACCAGTC...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp CAGTCTCTATGGCAACAGCTTGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGGGAGCCTGCGGGTTCTaGTGGCCTCCTGAGGTCCTC +
Preference number: 2 (lower is better)
Translates to: QSLWQQLGEQGPVVHKEKGACGF*WPPEVL
Trigger: GAGGACCTCAGGAGGCCAGCAGAACCCGCAGGCTCC...CTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTAGGGCTTCAAGGGCGTaGCCAGGCTCCAGGGGACCA +
Preference number: 2 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAARASRA*PGSRGP
Trigger: TGGTCCCCTGGAGCCTGGCCACGCCCTTGAAGCCCT...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGAAGTCCAGCCCTGTCTaGGGAAGGGGCAGCCATCAG +
Preference number: 2 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKEKSSPV*GRGSHQ
Trigger: CTGATGGCTGCCCCTTCCCCAGACAGGGCTGGACTT...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGGGTCCTCAGGGGGCGTaGCCCTCATGGAGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGGPQGA*PSWRKL
Trigger: CAACTTTCTCCATGAGGGTCACGCCCCCTGAGGACC...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp GCCTGGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGCAGTCTTCAGGAGCCTaGGGGTTCTGCTGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: AWEDGLFGDSWERDVRGQQSSGA*GFCWPP
Trigger: AGGAGGCCAGCAGAACCCGCAGGCTCCTGAAGACTG...CTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGAGGCCCCTGATGGGGTaGAGTAGGGTAGCCCTAGTA +
Preference number: 2 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKERPLMG*SRVALV
Trigger: TACTAGGGCTACCCTACTGCACCCCATCAGGGGCCT...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp CAGTCTCTATGGCAACAGCTTGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGAGTGGTCAAGCGCCCTaGCTGTCCGCCTACTCCCAG +
Preference number: 2 (lower is better)
Translates to: QSLWQQLGEQGPVVHKEKSGQAP*LSAYSQ
Trigger: CTGGGAGTAGGCGGACAGCCAGGGCGCTTGACCACT...CTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 90 bp GTGACATGGATCTTACCGGTCCCCAGGCCTGGGAAGATGGTCTGTTaGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: VTWILPVPRPGKMVC*VTVGKGTSEDRVGL
Trigger: CAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGCCTGGGGACCGGTAAGATCCATGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTCAGTCTCCAGTGAGATaGAGAAGGTGTACGGCCGGT +
Preference number: 2 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSQSPVR*RRCTAG
Trigger: ACCGGCCGTACACCTTCTGCATCTCACTGGAGACTG...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGCCAAGGCAACTGCTCTaGATAACTAGTGACATGGAT +
Preference number: 2 (lower is better)
Translates to: GCWVTLATASGRVISMAVPRQLL*ITSDMD
Trigger: ATCCATGTCACTAGTTATGCAGAGCAGTTGCCTTGG...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGAGAAAGTTGGGGAGTTaGGGGAATCCTCTATCCAGA +
Preference number: 2 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEARKLGS*GNPLSR
Trigger: TCTGGATAGAGGATTCCCCCAACTCCCCAACTTTCT...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGCCTCATGGAGAAAGTTaGGGAGTTGGGGGAATCCTC +
Preference number: 2 (lower is better)
Translates to: RTGCWVTLATASGRVISMPHGES*GVGGIL
Trigger: GAGGATTCCCCCAACTCCCCAACTTTCTCCATGAGG...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGGAAATATCTGAGGGGTaGGACGTGGCCCCCAGTAAG +
Preference number: 2 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKEEISEG*DVAPSK
Trigger: CTTACTGGGGGCCACGTCCCACCCCTCAGATATTTC...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTCGTCAGAGGACAGGGTaGGTTTGCTCTCCCTTCAAA +
Preference number: 2 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTRQRTG*VCSPFK
Trigger: TTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACG...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTATCCATGGTTACAGCTaGAGGAGGGAGGCACTGTCT +
Preference number: 2 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTIHGYS*RREALS
Trigger: AGACAGTGCCTCCCTCCTCCAGCTGTAACCATGGAT...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGGAACTGGAGTGGGCCTaGGGACAGGGACAGTTTGTT +
Preference number: 2 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKEELEWA*GQGQFV
Trigger: AACAAACTGTCCCTGTCCCCAGGCCCACTCCAGTTC...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTTCACCATGGCAACAGTaGTGGGGTCCAAACCGCCTG +
Preference number: 2 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCSPWQQ*WGPNRL
Trigger: CAGGCGGTTTGGACCCCACCACTGTTGCCATGGTGA...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTCGTGCAAACGGAGGGTaGCTTAGCAGCTCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSRANGG*LSSSRS
Trigger: ACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACG...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTGTGTGTGACTCTAGGTaGCAGGTAGCAGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCVCDSR*QVAAGL
Trigger: CAGTCCTGCTGCTACCTGTCACCTAGAGTCACACAC...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp CAGTCTCTATGGCAACAGCTTGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGAGCAGCAGGACTGGTTaGCTTGGTGACAGTGGGACC +
Preference number: 2 (lower is better)
Translates to: QSLWQQLGEQGPVVHKEKSSRTG*LGDSGT
Trigger: GGTCCCACTGTCACCAAGGCAACCAGTCCTGCTGCT...CTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AAGATTGTCTCGTGCACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGATGTTGGGTCACCCTaGCGACAGCTTCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: KIVSCTAAIRHRVNVQTEDVGSP*RQLRGG
Trigger: CCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATC...CTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGAGTTTGTTTCCATGGTaGGAGCCGGAGAACTGGATG +
Preference number: 2 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKESLFPW*EPENWM
Trigger: CATCCAGTTCTCCGGCTCTCACCATGGAAACAAACT...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCTGTCTTCATGGGTGTaGCTGATGAGGGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAALSSWV*LMREGV
Trigger: CACCCCTTCCCTCATCAGGCACACCCATGAAGACAG...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGAATGTGTGGTATCCATaGTTACAGCTGGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: RTGCWVTLATASGRVISMNVWYP*LQLEEG
Trigger: TCCCTCCTCCAGCTGTAACCATGGATACCACACATT...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp AAGATTGTCTCGTGCACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGCGGAGAACTGGATGTTaGGTCACCCTGGCGACAGCT +
Preference number: 2 (lower is better)
Translates to: KIVSCTAAIRHRVNVQTERRTGC*VTLATA
Trigger: AGCTGTCGCCAGGGTGACCCAACATCCAGTTCTCCG...CTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp GACCTGGTCCCAAAACTCAGAGATAGGTTTCCTAGAGATGACGTGACAGTAAAGGCCCAGTGTCCCACGTaGCCGCAAGGGACTAGTGTT +
Preference number: 2 (lower is better)
Translates to: DLVPKLRDRFPRDDVTVKAQCPT*PQGTSV
Trigger: AACACTAGTCCCTTGCGGTCACGTGGGACACTGGGC...CTTTACTGTCACGTCATCTCTAGGAAACCTATCTCTGAGTTTTGGGACCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCTGTTTGGTGACAGTTaGGAAAGGGACGTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAALFGDS*ERDVRG
Trigger: TCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAG...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTTCGCCGCTTAGAGCCTaGTGGGTGTTGAATTTTAAA +
Preference number: 2 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSSPLRA*WVLNFK
Trigger: TTTAAAATTCAACACCCACCAGGCTCTAAGCGGCGA...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR TCA 90 bp GACCTGGTCCCAAAACTCAGAGATAGGTTTCCTAGAGATGACGTGACAGTAAAGATGGCAACAGCTTGGTaGACAGGGCCCCGTTGTCCA +
Preference number: 2 (lower is better)
Translates to: DLVPKLRDRFPRDDVTVKMATAW*TGPRCP
Trigger: TGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCAT...CTTTACTGTCACGTCATCTCTAGGAAACCTATCTCTGAGTTTTGGGACCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATGAAACTAGAGGGGTGTaGCCTGTTACCCAGAAACTG +
Preference number: 2 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNETRGV*PVTQKL
Trigger: CAGTTTCTGGGTAACAGGGCACACCCCTCTAGTTTC...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 90 bp TCCTCATTTGTAGGACGACGACAAACATGCCCGGGTGTTGCAAGATaGTCTCGTGCACAGCTGCTATCCGGCATAGAGTTAACGTGCAAA +
Preference number: 2 (lower is better)
Translates to: SSFVGRRQTCPGVAR*SRAQLLSGIELTCK
Trigger: TTTGCACGTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTTGCAACACCCGGGCATGTTTGTCGTCGTCCTACAAATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 90 bp CAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTTaGTCACTTGGTCACACAGTGAGCAAGAAGAGGCAGAATTCAAAC +
Preference number: 2 (lower is better)
Translates to: QNSPGTVGEHRFRRS*SLGHTVSKKRQNSN
Trigger: GTTTGAATTCTGCCTCTTCTTGCTCACTGTGTGACCAAGTGACAAACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CCA 90 bp GACCTGGTCCCAAAACTCAGAGATAGGTTTCCTAGAGATGACGTGACAGTAAAGAGAGTTTGGTCACCATaGCAACAGTGGTGGGGTCCA +
Preference number: 2 (lower is better)
Translates to: DLVPKLRDRFPRDDVTVKRVWSP*QQWWGP
Trigger: TGGACCCCACCACTGTTGCCATGGTGACCAAACTCT...CTTTACTGTCACGTCATCTCTAGGAAACCTATCTCTGAGTTTTGGGACCAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR GCA 90 bp AAGATTGTCTCGTGCACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGAGGACAGGGTGGGTTTaGTCTCCCTTCAAAGAAATA +
Preference number: 2 (lower is better)
Translates to: KIVSCTAAIRHRVNVQTERTGWV*SPFKEI
Trigger: TATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCT...CTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 72 bp AGGAGGCGTGGCCAGTCTTCAGGAGCCTGCGGGTTCTaGTGGCCTCCTGAGGTCCTCAGGGGGCGTGACCCT +
Preference number: 3 (lower is better)
Translates to: RRRGQSSGACGF*WPPEVLRGRDP
Trigger: AGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCCGCAGGCTCCTGAAGACTGGCCACGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp CCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTaGTCTGTTTCCAAGTGGTCTCAGGAGGCGTGGCCA +
Preference number: 3 (lower is better)
Translates to: PGVQPPGDHGGS*SVSKWSQEAWP
Trigger: TGGCCACGCCTCCTGAGACCACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 72 bp AGTGGTCTCAGGAGGCGTGGCCAGTCTTCAGGAGCCTaGGGGTTCTGCTGGCCTCCTGAGGTCCTCAGGGGG +
Preference number: 3 (lower is better)
Translates to: SGLRRRGQSSGA*GFCWPPEVLRG
Trigger: CCCCCTGAGGACCTCAGGAGGCCAGCAGAACCCGCAGGCTCCTGAAGACTGGCCACGCCTCCTGAGACCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp AGGCGTGGCCAGTCTTCAGGAGCCTGCGGGTTCTGCTaGCCTCCTGAGGTCCTCAGGGGGCGTGACCCTCAT +
Preference number: 3 (lower is better)
Translates to: RRGQSSGACGFC*PPEVLRGRDPH
Trigger: ATGAGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCCGCAGGCTCCTGAAGACTGGCCACGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp CCAGGCGACCACGGGGGCAGTTGGTCTGTTTCCAAGTaGTCTCAGGAGGCGTGGCCAGTCTTCAGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: PGDHGGSWSVSK*SQEAWPVFRSL
Trigger: CAGGCTCCTGAAGACTGGCCACGCCTCCTGAGACCACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp GGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTaGGGGTGGAGCATGGAGGGTGGTCTGGAACTGGAG +
Preference number: 3 (lower is better)
Translates to: GHHGNSGGVQTA*GWSMEGGLELE
Trigger: CTCCAGTTCCAGACCACCCTCCATGCTCCACCCCCAGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp TCGGACTCCAGAGTTTGGTCACCATGGCAACAGTGGTaGGGTCCAAACCGCCTGGGGGTGGAGCATGGAGGG +
Preference number: 3 (lower is better)
Translates to: SDSRVWSPWQQW*GPNRLGVEHGG
Trigger: CCCTCCATGCTCCACCCCCAGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 72 bp AGCTGCCTGTCAACGCCGAGGACTTCGGCTGGGTCCTaGCCTCTTAGCACAGATCGCCGCTTAGAGCCTGGT +
Preference number: 3 (lower is better)
Translates to: SCLSTPRTSAGS*PLSTDRRLEPG
Trigger: ACCAGGCTCTAAGCGGCGATCTGTGCTAAGAGGTCAGGACCCAGCCGAAGTCCTCGGCGTTGACAGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CAA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGGAGAAAGTTGGGGAGTaGGGGGAATCCTCTATCCAG +
Preference number: 3 (lower is better)
Translates to: GCWVTLATASGRVISMAVEKVGE*GESSIQ
Trigger: CTGGATAGAGGATTCCCCCAACTCCCCAACTTTCTC...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 72 bp CCCCCAGTAAGTGAGCCAGCTGGCTGTGTGTCAGTCTaGGGTGGCAGATGGGGGTGCTCGCCCATGAAACTA +
Preference number: 3 (lower is better)
Translates to: PPVSEPAGCVSV*GGRWGCSPMKL
Trigger: TAGTTTCATGGGCGAGCACCCCCATCTGCCACCTCAGACTGACACACAGCCAGCTGGCTCACTTACTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 72 bp GAAATATCTGAGGGGTGGGACGTGGCCCCCAGTAAGTaGGCCAGCTGGCTGTGTGTCAGTCTGAGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: EISEGWDVAPSK*ASWLCVSLRWQ
Trigger: CTGCCACCTCAGACTGACACACAGCCAGCTGGCTCACTTACTGGGGGCCACGTCCCACCCCTCAGATATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 72 bp TACCGGTCCCCAGGCCTGGGAAGATGGTCTGTTTGGTaGCAGTTGGGAAAGGGACGTCAGAGGACAGGGTGG +
Preference number: 3 (lower is better)
Translates to: YRSPGLGRWSVW*QLGKGRQRTGW
Trigger: CCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGCCTGGGGACCGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CAA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGCGACCACGGGGGCAGTaGGTCTGTTTCCAAGTGGTC +
Preference number: 3 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGRPRGQ*VCFQVV
Trigger: GACCACTTGGAAACAGACCAACTGCCCCCGTGGTCG...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CAA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTCTCTATGGCAACAGCTaGGTGAACAGGGCCCCGTTG +
Preference number: 3 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSLYGNS*VNRAPL
Trigger: CAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAG...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp GAGGTCCTCAGGGGGCGTGACCCTCATGGAGAAAGTTaGGGAGTTGGGGGAATCCTCTATCCAGAAGAGGTG +
Preference number: 3 (lower is better)
Translates to: EVLRGRDPHGES*GVGGILYPEEV
Trigger: CACCTCTTCTGGATAGAGGATTCCCCCAACTCCCCAACTTTCTCCATGAGGGTCACGCCCCCTGAGGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp CCCCAGGCCTGGGAAGATGGTCTGTTTGGTGACAGTTaGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCT +
Preference number: 3 (lower is better)
Translates to: PQAWEDGLFGDS*ERDVRGQGGFA
Trigger: AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp GGGGACAGGTGTTCTGTTACCTCGGACTCCAGAGTTTaGTCACCATGGCAACAGTGGTGGGGTCCAAACCGC +
Preference number: 3 (lower is better)
Translates to: GDRCSVTSDSRV*SPWQQWWGPNR
Trigger: GCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAGGTAACAGAACACCTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CAA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGGTGAACAGGGCCCCGTaGTCCACAAGGAAAAGCCTA +
Preference number: 3 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKEVNRAP*STRKSL
Trigger: TAGGCTTTTCCTTGTGGACAACGGGGCCCTGTTCAC...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 72 bp CCACGTGACCGCAAGGGACTAGTGTTCAGTCTCCAGTaGGATGCAGAAGGTGTACGGCCGGTCTCTAGTCAA +
Preference number: 3 (lower is better)
Translates to: PRDRKGLVFSLQ*DAEGVRPVSSQ
Trigger: TTGACTAGAGACCGGCCGTACACCTTCTGCATCTCACTGGAGACTGAACACTAGTCCCTTGCGGTCACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR TCA 72 bp CCCTGGATCTTGTCAATGACCCAGTCAGGACAGAGTTaGCAAGGAGCAGACCCATGGTGGGTGGCTAAAGGG +
Preference number: 3 (lower is better)
Translates to: PWILSMTQSGQS*QGADPWWVAKG
Trigger: CCCTTTAGCCACCCACCATGGGTCTGCTCCTTGTCAACTCTGTCCTGACTGGGTCATTGACAAGATCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp GGCACTCACGGGGACCACAGAACAGCCCTGGTACAGTaGGAGAACACAGGTTCAGAAGGAGTTTGTCACTTG +
Preference number: 3 (lower is better)
Translates to: GTHGDHRTALVQ*ENTGSEGVCHL
Trigger: CAAGTGACAAACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 72 bp CAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTaGTCTCCCTTCAAAGAAATATCTGAGGGGTGGGAC +
Preference number: 3 (lower is better)
Translates to: QLGKGRQRTGWV*SPFKEISEGWD
Trigger: GTCCCACCCCTCAGATATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 72 bp ATGGGGTCTCAGAGGACAAAAGAGGAGCTCAGTGCTTaGATATCTCAACAGACCAGGGCACGCCATAGGCTC +
Preference number: 3 (lower is better)
Translates to: MGSQRTKEELSA*ISQQTRARHRL
Trigger: GAGCCTATGGCGTGCCCTGGTCTGTTGAGATATGCAAGCACTGAGCTCCTCTTTTGTCCTCTGAGACCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp GTATGCTTGGCACTCACGGGGACCACAGAACAGCCCTaGTACAGTGGGAGAACACAGGTTCAGAAGGAGTTT +
Preference number: 3 (lower is better)
Translates to: VCLALTGTTEQP*YSGRTQVQKEF
Trigger: AAACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGCCAAGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 72 bp CTCATTTGTAGGACGACGACAAACATGCCCGGGTGTTaGAAGATTGTCTCGTGCACAGCTGCTATCCGGCAT +
Preference number: 3 (lower is better)
Translates to: LICRTTTNMPGC*KIVSCTAAIRH
Trigger: ATGCCGGATAGCAGCTGTGCACGAGACAATCTTGCAACACCCGGGCATGTTTGTCGTCGTCCTACAAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR GCA 72 bp ACGACAAACATGCCCGGGTGTTGCAAGATTGTCTCGTaGACAGCTGCTATCCGGCATAGAGTTAACGTGCAA +
Preference number: 3 (lower is better)
Translates to: TTNMPGCCKIVS*TAAIRHRVNVQ
Trigger: TTGCACGTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTTGCAACACCCGGGCATGTTTGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp ATAACTAGTGACATGGATCTTACCGGTCCCCAGGCCTaGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: ITSDMDLTGPQA*EDGLFGDSWER
Trigger: CCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGCCTGGGGACCGGTAAGATCCATGTCACTAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CAA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCGGGAAGATGGTCTGTTaGGTGACAGTTGGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFGKMVC*VTVGKG
Trigger: CCCTTTCCCAACTGTCACCAAACAGACCATCTTCCC...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CAA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCAGAGGAGCTCAGTGCTaGCATATCTCAACAGACCAG +
Preference number: 3 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFRGAQC*HISTDQ
Trigger: CTGGTCTGTTGAGATATGCAAGCACTGAGCTCCTCT...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR-3UTR CAA 90 bp GACCTGGTCCCAAAACTCAGAGATAGGTTTCCTAGAGATGACGTGACAGTAAAGGAGGACAGGGTGGGTTaGCTCTCCCTTCAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: DLVPKLRDRFPRDDVTVKEDRVG*LSLQRN
Trigger: ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTC...CTTTACTGTCACGTCATCTCTAGGAAACCTATCTCTGAGTTTTGGGACCAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CCA 72 bp AGTGGGAGAACACAGGTTCAGAAGGAGTTTGTCACTTaGTCACACAGTGAGCAAGAAGAGGCAGAATTCAAA +
Preference number: 3 (lower is better)
Translates to: SGRTQVQKEFVT*SHSEQEEAEFK
Trigger: TTTGAATTCTGCCTCTTCTTGCTCACTGTGTGACCAAGTGACAAACTCCTTCTGAACCTGTGTTCTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 72 bp CCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTaGGTCTGTTTCCAAGTGGTCTCAGGAGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGGPATRRPRGQ*VCFQVVSGGVA
Trigger: GGCCACGCCTCCTGAGACCACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGGTTCTGCTGGCCTCCTGAGGTCCTCAGGGGGCGTGACCCTCATGGAGAAAGTTGCGCAGGCCCCCGTTaGCATCACCGCCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GFCWPPEVLRGRDPHGESCAGPR*HHRRPL
Trigger: CAGGGGGCGGCGGTGATGCCAACGGGGGCCTGCGCA...ACTTTCTCCATGAGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGAGGTGCCGGGTCCGGTaGTCCTGGAGCGCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GCWVTLATASGRVISMAVRCRVR*SWSAVA
Trigger: TGCTACCGCGCTCCAGGAGCACCGGACCCGGCACCT...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTTCGGCGCACGCGCGCTaGGCCTCCGCGAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTSAHAR*ASAKVS
Trigger: GCTGACCTTCGCGGAGGCGCAGCGCGCGTGCGCCGA...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GCACTCACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGGCCAGGATGCCGTCCTaGTCGGCGCACGCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ALTGTTEQPWYSGRTQVQARMPS*SAHARC
Trigger: GCAGCGCGCGTGCGCCGAGCAGGACGGCATCCTGGC...CTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGCGGGTCCGGTGCTCCTaGAGCGCGGTAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: GCWVTLATASGRVISMAVRVRCS*SAVAVD
Trigger: GTCTACTGCTACCGCGCTCCAGGAGCACCGGACCCG...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGGTGGCCCCCAGTAAGTaGGCCAGCTGGCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GCWVTLATASGRVISMAVVAPSK*ASWLCV
Trigger: GACACACAGCCAGCTGGCTCACTTACTGGGGGCCAC...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTCCAAGTGGACTGGTTGCCTTGGTaGCAGTGGGACCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PGGPATRRPRGQLVCFQVDWLPW*QWDPRQ
Trigger: TTGCCTTGGGTCCCACTGTCACCAAGGCAACCAGTC...CACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTCCAAGTGATGGCAACAGCTTGGTaGACAGGGCCCCGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGGPATRRPRGQLVCFQVMATAW*TGPRCP
Trigger: TGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCAT...CACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp CTCGGACTCCAGAGTTTGGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTCCCGCCCACGGTAGCTaGCGAATGCCCGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGLQSLVTMATVVGSKPPPAHGS*RMPGAG
Trigger: CCCAGCACCGGGCATTCGGCAGCTACCGTGGGCGGG...AGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGGGCGATACCCGTAGTTaGGCAGGCCCCCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GCWVTLATASGRVISMAVGDTRS*AGPRWH
Trigger: ATGCCAACGGGGGCCTGCGCAACTACGGGTATCGCC...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGCACGCGGCGAACAGCTaGCCCACCTTGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: RTGCWVTLATASGRVISMHAANS*PTLATA
Trigger: GGCCGTGGCCAAGGTGGGGCAGCTGTTCGCCGCGTG...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTCAGCGGTCTAGCAGCTaGAGCTTCCACGCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: SQSRGSSHQATTGAVGLFQRSSS*SFHAAN
Trigger: GTTCGCCGCGTGGAAGCTGCAGCTGCTAGACCGCTG...AAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp AGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTTCTATCCAGAAGAGGTaGGGGCTGGCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQSRGSSHQATTGAVGLFSIQKR*GLARLQ
Trigger: CTGGAGCCTGGCCAGCCCTCACCTCTTCTGGATAGA...AAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTCCAAGTGCAGTCAGGACAGAGTTaGCAAGGAGCAGACCCATGG +
Preference number: 4 (lower is better)
Translates to: PGGPATRRPRGQLVCFQVQSGQS*QGADPW
Trigger: CCATGGGTCTGCTCCTTGTCAACTCTGTCCTGACTG...CACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTTCTTCCGGCCACGCTaGGCCCCCGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKEFFRPR*APAGAV
Trigger: CACAGCCCCTGCGGGGGCGCAGCGTGGCCGGAAGAA...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTTGCGCACACCAGGCCTaGGGCCTCCGCAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCCAHQA*GLRSAL
Trigger: GAGCGCGCTGCGGAGGCCGCAGGCCTGGTGTGCGCA...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGATGGTGCCACCACGGTaGCTTACCACCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEAMVPPR*LTTCPG
Trigger: GCCTGGGCAGGTGGTAAGCCACCGTGGTGGCACCAT...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGGGTCCTCAGGGGGCGTaGCCCTCATGGAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEAGPQGA*PSWRKL
Trigger: CAACTTTCTCCATGAGGGTCACGCCCCCTGAGGACC...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp GGGTTCTGCTGGCCTCCTGAGGTCCTCAGGGGGCGTGACCCTCATGGAGAAAGTGGGACAGCCAGAAGTTaGGGTGGAGGTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GFCWPPEVLRGRDPHGESGTARS*GGGLWG
Trigger: ACCCCAGAGACCTCCACCTCAACTTCTGGCTGTCCC...ACTTTCTCCATGAGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp AGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTGAGGTGGGGGAGGAATaGAGGACCCCACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SQSRGSSHQATTGAVGLFEVGEE*RTPLPK
Trigger: CTTTGGAAGTGGGGTCCTTCATTCCTCCCCCACCTC...AAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTGGAGCCTGCGGGTTCTaGTGGCCTCCTGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTGACGF*WPPEVL
Trigger: GAGGACCTCAGGAGGCCAGCAGAACCCGCAGGCTCC...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCGAAGAGCCGTCGGGTaGCGTCCGGGAAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GLFGDSWERDVRGQGGFARRAVG*RPGSRG
Trigger: GCCTCGGCTTCCCGGACGCCACCCGACGGCTCTTCG...AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTCCAAGTGACAGTGGGCACAGGATaGGGGAAGAAAGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: PGGPATRRPRGQLVCFQVTVGTG*GKKEEQ
Trigger: TTGCTCCTCTTTCTTCCCCCATCCTGTGCCCACTGT...CACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGCCACCTTTGTCCACTTaGGCCGGACGCCGTCGTGAC +
Preference number: 4 (lower is better)
Translates to: RTGCWVTLATASGRVISMPPLST*AGRRRD
Trigger: GTCACGACGGCGTCCGGCTCAAGTGGACAAAGGTGG...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTCTGCCGAATGCCCGGTaGTGGGGGCCTAGTGCCACG +
Preference number: 4 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCLPNAR*WGPSAT
Trigger: CGTGGCACTAGGCCCCCAGCACCGGGCATTCGGCAG...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGCAGCTGTTCTGCAGATaGCAGGATGCCGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEAQLFCR*QDAVLL
Trigger: GAGCAGGACGGCATCCTGGCATCTGCAGAACAGCTG...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTCCAGCCAACCCGCGGTaGAGCGGTCTAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSPANPR*SGLAAA
Trigger: TGCAGCTGCTAGACCGCTGCACCGCGGGTTGGCTGG...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGGTTCTGCTGGCCTCCTGAGGTCCTCAGGGGGCGTGACCCTCATGGAGAAAGTAGCAGCAGGACTGGTTaGCTTGGTGACAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: GFCWPPEVLRGRDPHGESSSRTG*LGDSGT
Trigger: GGTCCCACTGTCACCAAGGCAACCAGTCCTGCTGCT...ACTTTCTCCATGAGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTCTCGCGGGTTCACGATaGGGTAGCGCGCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTLAGSR*GSAHCH
Trigger: ATGGCAGTGCGCGCTACCCCATCGTGAACCCGCGAG...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp AGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTTGGTCTGTTTCCAAGTaGTCTCAGGAGGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SQSRGSSHQATTGAVGLFWSVSK*SQEAWP
Trigger: TGGCCACGCCTCCTGAGACCACTTGGAAACAGACCA...AAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GCACTCACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGGATGTTGGGTCACCCTaGCGACAGCTTCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALTGTTEQPWYSGRTQVQDVGSP*RQLRGG
Trigger: CCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATC...CTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTCCTGGGGGTGGAGCATaGAGGGTGGTCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTPGGGA*RVVWNW
Trigger: CCAGTTCCAGACCACCCTCCATGCTCCACCCCCAGG...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTCCATGGCAACAGTGGTaGGGTCCAAACCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTPWQQW*GPNRLG
Trigger: CCCCAGGCGGTTTGGACCCCACCACTGTTGCCATGG...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTGCAAGACTTCGGGACTaGGGTCTCCCACGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSARLRD*GLPRPG
Trigger: TCCCGGCCGTGGGAGACCCCAGTCCCGAAGTCTTGC...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGGTAACCCCAACACTTTaGGAGGCCGAGGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GCWVTLATASGRVISMAVVTPTL*EAEVGR
Trigger: TCTACCCACCTCGGCCTCCCAAAGTGTTGGGGTTAC...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGCCACGAAGACGTCGGTaGAGGCCAGCGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGPRRRR*RPAGPP
Trigger: TGGTGGACCCGCTGGCCTTCACCGACGTCTTCGTGG...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGCCGGCAGGTTGGACGTaGAGCAGAAGGCGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKEPAGWT*SRRRRS
Trigger: GCTACGACGCCTTCTGCTTCACGTCCAACCTGCCGG...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTCGCGCCAGGCCGCGTaGAGCTGTTCTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGSRQAA*SCSADA
Trigger: GGCATCTGCAGAACAGCTGCACGCGGCCTGGCGCGA...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGCAGTCTTCAGGAGCCTaGGGGTTCTGCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RTGCWVTLATASGRVISMQSSGA*GFCWPP
Trigger: AGGAGGCCAGCAGAACCCGCAGGCTCCTGAAGACTG...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGACAATCATGGCTCACTaGAGCCTCGACCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GCWVTLATASGRVISMAVTIMAH*SLDLLA
Trigger: AGCCAGAAGGTCGAGGCTGCAGTGAGCCATGATTGT...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CTCGGACTCCAGAGTTTGGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTGGCAGGGCAAGACGATaGTGCCACCACGGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: LGLQSLVTMATVVGSKPPGRARR*CHHGGL
Trigger: TAAGCCACCGTGGTGGCACCATCGTCTTGCCCTGCC...AGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GCCTGGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGCCGAATGCCCGGTGCTaGGGGCCTAGTGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: AWEDGLFGDSWERDVRGQPNARC*GPSATK
Trigger: CTTCGTGGCACTAGGCCCCCAGCACCGGGCATTCGG...CTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GCCTGGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGAGGGCTTCAAGGGCGTaGCCAGGCTCCAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: AWEDGLFGDSWERDVRGQRASRA*PGSRGP
Trigger: TGGTCCCCTGGAGCCTGGCCACGCCCTTGAAGCCCT...CTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CTCGGACTCCAGAGTTTGGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTTGGTCTCAGGAGGCGTaGCCAGTCTTCAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LGLQSLVTMATVVGSKPPWSQEA*PVFRSL
Trigger: CAGGCTCCTGAAGACTGGCCACGCCTCCTGAGACCA...AGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGGTTCTGCTGGCCTCCTGAGGTCCTCAGGGGGCGTGACCCTCATGGAGAAAGTGAACTGGAGTGGGCCTaGGGACAGGGACAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GFCWPPEVLRGRDPHGESELEWA*GQGQFV
Trigger: AACAAACTGTCCCTGTCCCCAGGCCCACTCCAGTTC...ACTTTCTCCATGAGGGTCACGCCCCCTGAGGACCTCAGGAGGCCAGCAGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGGGGGTCCAAACCGCCTaGGGGTGGAGCATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGGVQTA*GWSMEG
Trigger: ACCCTCCATGCTCCACCCCCAGGCGGTTTGGACCCC...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GCACTCACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGCTCCCACGGCCGGGATaGCCTTGTCCATGGATCATG +
Preference number: 4 (lower is better)
Translates to: ALTGTTEQPWYSGRTQVQLPRPG*PCPWIM
Trigger: CATGATCCATGGACAAGGCCATCCCGGCCGTGGGAG...CTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCAGCCGGACGCCGTCGTaGCCGTGGGCGGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFSRTPS*PWAAAS
Trigger: TGAGGCAGCCGCCCACGGTCACGACGGCGTCCGGCT...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCACGGGGTATTGCACTaGGCCGTCGCGCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAAHGVLH*AVAQPA
Trigger: GGCTGGTTGCGCGACGGCTCAGTGCAATACCCCGTG...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTGCCCAGTGTCCCACGTaGCCGCAAGGGACTAGTGTT +
Preference number: 4 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSAQCPT*PQGTSV
Trigger: AACACTAGTCCCTTGCGGTCACGTGGGACACTGGGC...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTACTTCGGCTGGGTCCTaGCCTCTTAGCACAGATCGC +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTTSAGS*PLSTDR
Trigger: GCGATCTGTGCTAAGAGGTCAGGACCCAGCCGAAGT...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTCGGTGGCTTACCACCTaGCCAGGCGCTGTCTGTACC +
Preference number: 4 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCRWLTT*PGAVCT
Trigger: GGTACAGACAGCGCCTGGGCAGGTGGTAAGCCACCG...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGGTGACCGTGGGCGGCTaGCTCATAGTGGTAGCGGCA +
Preference number: 4 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGVTVGG*LIVVAA
Trigger: TGCCGCTACCACTATGAGGCAGCCGCCCACGGTCAC...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTGGACCCCAGTACTCCTaGAGGCAAGACTTCGGGACT +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTGPQYS*RQDFGT
Trigger: AGTCCCGAAGTCTTGCCTGCAGGAGTACTGGGGTCC...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCACAGCTGCCCCACCTTaGCCACGGCCGCGCCACGCG +
Preference number: 4 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFTAAPP*PRPRHA
Trigger: CGCGTGGCGCGGCCGTGGCCAAGGTGGGGCAGCTGT...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTGGACCACAGGGAATGTaGCCAGTGTCCAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTGPQGM*PVSRAS
Trigger: TGAAGCCCTGGACACTGGCCACATTCCCTGTGGTCC...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTGAGGGGTGGGACGTaGCCCCCAGTAAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GLFGDSWERDVRGQGGFALRGGT*PPVSEP
Trigger: TGGCTCACTTACTGGGGGCCACGTCCCACCCCTCAG...AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTTCACCATGGCAACAGTaGTGGGGTCCAAACCGCCTG +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTSPWQQ*WGPNRL
Trigger: CAGGCGGTTTGGACCCCACCACTGTTGCCATGGTGA...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CTCGGACTCCAGAGTTTGGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTGGAGCAGACCCATGGTaGGTGGCTAAAGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LGLQSLVTMATVVGSKPPGADPW*VAKGRQ
Trigger: CTGTCTCCCTTTAGCCACCCACCATGGGTCTGCTCC...AGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CAGTCTCTATGGCAACAGCTTGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGCGTAGTCTTGCAGCGTaGCGTTGCGGAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: QSLWQQLGEQGPVVHKEKRSLAA*RCGGPG
Trigger: CCCTGGTCCTCCGCAACGTCACGCTGCAAGACTACG...CTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CAGTCTCTATGGCAACAGCTTGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGCCCACAACCTCCATGTaGCCACGGGGAGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: QSLWQQLGEQGPVVHKEKPTTSM*PRGVTL
Trigger: CAGGGTCACTCCCCGTGGTCACATGGAGGTTGTGGG...CTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CTCGGACTCCAGAGTTTGGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTGTGTGTGACTCTAGGTaGCAGGTAGCAGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LGLQSLVTMATVVGSKPPVCDSR*QVAAGL
Trigger: CAGTCCTGCTGCTACCTGTCACCTAGAGTCACACAC...AGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGCCTGGATCTTGTCAATaGCCCAGTCAGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEAPGSCQ*PSQDRV
Trigger: AACTCTGTCCTGACTGGGTCATTGACAAGATCCAGG...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTTCACCCTCCAGCACGTaGACGACCTTCTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GLFGDSWERDVRGQGGFASPSST*TTFFRP
Trigger: TGGCCGGAAGAAGGTCGTGCACGTGCTGGAGGGTGA...AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATCTGCAGATGCCAGGATaGCGTCCTGCTCGGCGCACG +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNLQMPG*RPARRT
Trigger: CGTGCGCCGAGCAGGACGGCATCCTGGCATCTGCAG...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTGGTGGCAGATGGGGGTaGTCGCCCATGAAACTAGAG +
Preference number: 4 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSGGRWG*SPMKLE
Trigger: CTCTAGTTTCATGGGCGAGCACCCCCATCTGCCACC...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGGAGGAGCTCAGTGCTTaGATATCTCAACAGACCAGG +
Preference number: 4 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEAEELSA*ISQQTR
Trigger: CCTGGTCTGTTGAGATATGCAAGCACTGAGCTCCTC...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GCACTCACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGGCAGTGAGCCAAGATTaGACGACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALTGTTEQPWYSGRTQVQAVSQD*TTALQP
Trigger: AGGCTGGAGTGCAGTCGTGCAATCTTGGCTCACTGC...CTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGAATGTGTGGTATCCATaGTTACAGCTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GCWVTLATASGRVISMAVNVWYP*LQLEEG
Trigger: TCCCTCCTCCAGCTGTAACCATGGATACCACACATT...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTGTGGAGCATGGAGGGTaGTCTGGAACTGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCVEHGG*SGTGVG
Trigger: GCCCACTCCAGTTCCAGACCACCCTCCATGCTCCAC...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCAAACCGCCTGGGGGTaGAGCATGGAGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAAQTAWG*SMEGGL
Trigger: CAGACCACCCTCCATGCTCCACCCCCAGGCGGTTTG...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGAAGTCCAGCCCTGTCTaGGGAAGGGGCAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGKSSPV*GRGSHQ
Trigger: CTGATGGCTGCCCCTTCCCCAGACAGGGCTGGACTT...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTCCAAGTGAAGGAGTTTGTCACTTaGTCACACAGTGAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PGGPATRRPRGQLVCFQVKEFVT*SHSEQE
Trigger: TTCTTGCTCACTGTGTGACCAAGTGACAAACTCCTT...CACTTGGAAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGCAAGGAGCAGACCCATaGTGGGTGGCTAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RTGCWVTLATASGRVISMQGADP*WVAKGR
Trigger: TCTCCCTTTAGCCACCCACCATGGGTCTGCTCCTTG...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 72 bp GGGGGACAGGTGTTCTGTTACCTCGGACTCCAGAGTTaGGTCACCATGGCAACAGTGGTGGGGTCCAAACCG +
Preference number: 4 (lower is better)
Translates to: GGQVFCYLGLQS*VTMATVVGSKP
Trigger: CGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAGGTAACAGAACACCTGTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp GCACTCACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGGTGTTCAGTCTCCAGTaGGATGCAGAAGGTGTACGG +
Preference number: 4 (lower is better)
Translates to: ALTGTTEQPWYSGRTQVQVFSLQ*DAEGVR
Trigger: CCGTACACCTTCTGCATCTCACTGGAGACTGAACAC...CTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGTGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCGCGTGCAGCTGTTCTaGAGATGCCAGGATGCCGTC +
Preference number: 4 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAARVQLF*RCQDAV
Trigger: GACGGCATCCTGGCATCTGCAGAACAGCTGCACGCG...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp CAGTCTCTATGGCAACAGCTTGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGCGGTTCACGGGGTATTaGACTGAGCCGTCGCGCAAC +
Preference number: 4 (lower is better)
Translates to: QSLWQQLGEQGPVVHKEKRFTGY*TEPSRN
Trigger: GTTGCGCGACGGCTCAGTGCAATACCCCGTGAACCG...CTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTCTGTCTTCATGGGTGTaGCTGATGAGGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSLSSWV*LMREGV
Trigger: CACCCCTTCCCTCATCAGGCACACCCATGAAGACAG...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTAGGCCCCTGATGGGGTaGAGTAGGGTAGCCCTAGTA +
Preference number: 4 (lower is better)
Translates to: GLFGDSWERDVRGQGGFARPLMG*SRVALV
Trigger: TACTAGGGCTACCCTACTGCACCCCATCAGGGGCCT...AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATAGTGGTCAAGCGCCCTaGCTGTCCGCCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNSGQAP*LSAYSQ
Trigger: CTGGGAGTAGGCGGACAGCCAGGGCGCTTGACCACT...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GCCTGGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGACCGGTCCCCAGGCCTaGGAAGATGGTCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: AWEDGLFGDSWERDVRGQTGPQA*EDGLFG
Trigger: ACCAAACAGACCATCTTCCCAGGCCTGGGGACCGGT...CTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CTCGGACTCCAGAGTTTGGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTGAGGCACTGTCTTCATaGGTGTGCCTGATGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LGLQSLVTMATVVGSKPPEALSS*VCLMRE
Trigger: TTCCCTCATCAGGCACACCCATGAAGACAGTGCCTC...AGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATGCATGGAGGGTGGTCTaGAACTGGAGTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNAWRVV*NWSGPG
Trigger: CCCAGGCCCACTCCAGTTCCAGACCACCCTCCATGC...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 72 bp ATCTTACCGGTCCCCAGGCCTGGGAAGATGGTCTGTTaGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ILPVPRPGKMVC*VTVGKGTSEDR
Trigger: CCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGCCTGGGGACCGGTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGAGATGGTCTGTTTGGTaGCAGTTGGGAAAGGGACGT +
Preference number: 4 (lower is better)
Translates to: RTGCWVTLATASGRVISMRWSVW*QLGKGR
Trigger: ACGTCCCTTTCCCAACTGTCACCAAACAGACCATCT...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTCAGTCTCCAGTGAGATaGAGAAGGTGTACGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCQSPVR*RRCTAG
Trigger: ACCGGCCGTACACCTTCTGCATCTCACTGGAGACTG...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATAGGGCTCTAGACCAGTaGTCAAGCGCCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNRALDQ*SSALAV
Trigger: GACAGCCAGGGCGCTTGACCACTGGTCTAGAGCCCT...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTGACCACGGGGGCAGTTaGTCTGTTTCCAAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCDHGGS*SVSKWS
Trigger: AGACCACTTGGAAACAGACCAACTGCCCCCGTGGTC...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTACAGCCCTGGTACAGTaGGAGAACACAGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTTALVQ*ENTGSE
Trigger: TTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGT...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCTTCCAGCTCATTGGTaGCTTCGCACTCATAGCGCC +
Preference number: 4 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAALPAHW*LRTHSA
Trigger: GGCGCTATGAGTGCGAAGTCACCAATGAGCTGGAAG...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCGGCTGTGTGTCAGTCTaGGGTGGCAGATGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFGCVSV*GGRWGC
Trigger: GCACCCCCATCTGCCACCTCAGACTGACACACAGCC...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CTCGGACTCCAGAGTTTGGTCACCATGGCAACAGTGGTGGGGTCCAAACCGCCTCACTTGGTCACACAGTaGGCAAGAAGAGGCAGAATT +
Preference number: 4 (lower is better)
Translates to: LGLQSLVTMATVVGSKPPHLVTQ*ARRGRI
Trigger: AATTCTGCCTCTTCTTGCTCACTGTGTGACCAAGTG...AGGCGGTTTGGACCCCACCACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATAGGGCAAGACGATGGTaGCACCACGGTGGCTTACCA +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNRARRW*HHGGLP
Trigger: TGGTAAGCCACCGTGGTGGCACCATCGTCTTGCCCT...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp AGAACTGGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGAGAAAGTTGGGGAGTTaGGGGAATCCTCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: RTGCWVTLATASGRVISMRKLGS*GNPLSR
Trigger: TCTGGATAGAGGATTCCCCCAACTCCCCAACTTTCT...CATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCCAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGCCTCATGGAGAAAGTTaGGGAGTTGGGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGPHGES*GVGGIL
Trigger: GAGGATTCCCCCAACTCCCCAACTTTCTCCATGAGG...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GACCTGGTCCCAAAACTCAGAGATAGGTTTCCTAGAGATGACGTGACAGTAAAGGCCTGCGGGTTCTGCTaGCCTCCTGAGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: DLVPKLRDRFPRDDVTVKACGFC*PPEVLR
Trigger: CCTGAGGACCTCAGGAGGCCAGCAGAACCCGCAGGC...CTTTACTGTCACGTCATCTCTAGGAAACCTATCTCTGAGTTTTGGGACCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTATCCATGGTTACAGCTaGAGGAGGGAGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCIHGYS*RREALS
Trigger: AGACAGTGCCTCCCTCCTCCAGCTGTAACCATGGAT...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTGGCACCCAGGACTTCTaGCCCACAATGAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAAGTQDF*PTMRSS
Trigger: GGAACTTCTCATTGTGGGCCAGAAGTCCTGGGTGCC...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CAGTCTCTATGGCAACAGCTTGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGCGTGCAAACGGAGGGTaGCTTAGCAGCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QSLWQQLGEQGPVVHKEKRANGG*LSSSRS
Trigger: ACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACG...CTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATCAGACCCATGGTGGGTaGCTAAAGGGAGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNQTHGG*LKGDSG
Trigger: CCCACTGTCTCCCTTTAGCCACCCACCATGGGTCTG...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTGAAACTAGAGGGGTGTaGCCTGTTACCCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCETRGV*PVTQKL
Trigger: CAGTTTCTGGGTAACAGGGCACACCCCTCTAGTTTC...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATCCTAGAAACTTCCAGTaGTTCCTCAGCCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNPRNFQ*FLSPCP
Trigger: AGGGCAGGGGCTGAGGAAGCACTGGAAGTTTCTAGG...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATGAAATATCTGAGGGGTaGGACGTGGCCCCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNEISEG*DVAPSK
Trigger: CTTACTGGGGGCCACGTCCCACCCCTCAGATATTTC...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCGTCAGAGGACAGGGTaGGTTTGCTCTCCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAARQRTG*VCSPFK
Trigger: TTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACG...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GCCTGGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGCTGTTTGGTGACAGTTaGGAAAGGGACGTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: AWEDGLFGDSWERDVRGQLFGDS*ERDVRG
Trigger: TCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAG...CTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 72 bp CATGAGGACAACGTTGACAGTCTCTATGGCAACAGCTaGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: HEDNVDSLYGNS*VNRAPLSTRKS
Trigger: GCTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTGTCAACGTTGTCCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
3UTR CAA 72 bp GTAGGACGACGACAAACATGCCCGGGTGTTGCAAGATaGTCTCGTGCACAGCTGCTATCCGGCATAGAGTTA +
Preference number: 4 (lower is better)
Translates to: VGRRQTCPGVAR*SRAQLLSGIEL
Trigger: TAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTTGCAACACCCGGGCATGTTTGTCGTCGTCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTGAATTACCCACTGGCTaGCTCATTTTCTCATTCATC +
Preference number: 4 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTELPTG*LIFSFI
Trigger: GATGAATGAGAAAATGAGGCAGCCAGTGGGTAATTC...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATAGAGTTTGGTCACCATaGCAACAGTGGTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNRVWSP*QQWWGP
Trigger: TGGACCCCACCACTGTTGCCATGGTGACCAAACTCT...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCCGAATTTCATGCCCTaGATCTTGTCAATGACCCAG +
Preference number: 4 (lower is better)
Translates to: GLFGDSWERDVRGQGGFAPNFMP*ILSMTQ
Trigger: CTGGGTCATTGACAAGATCCAGGGCATGAAATTCGG...AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp GGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTACAATGAGAAGTTCCTaGGAACTGGAAGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GLFGDSWERDVRGQGGFATMRSS*ELEVWL
Trigger: CAACCAGACTTCCAGTTCTCAGGAACTTCTCATTGT...AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp GGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTACATTCCATCCCTCCTaGATCTCTAAGGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: GLFGDSWERDVRGQGGFATFHPS*ISKEGN
Trigger: ATTTCCCTCCTTAGAGATCCAGGAGGGATGGAATGT...AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGACAGGAATTACCCACTaGCTGCCTCATTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKETGITH*LPHFLI
Trigger: AATGAGAAAATGAGGCAGCCAGTGGGTAATTCCTGT...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp AAGATTGTCTCGTGCACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGTGCAAGATTGTCTCGTaGACAGCTGCTATCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KIVSCTAAIRHRVNVQTECKIVS*TAAIRH
Trigger: ATGCCGGATAGCAGCTGTGCACGAGACAATCTTGCA...CTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGAAAAGAGGAGCTCAGTaGTTGCATATCTCAACAGAC +
Preference number: 4 (lower is better)
Translates to: EDGLFGDSWERDVRGQGGKRGAQ*LHISTD
Trigger: GTCTGTTGAGATATGCAAGCACTGAGCTCCTCTTTT...CCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CAGTCTCTATGGCAACAGCTTGGTGAACAGGGCCCCGTTGTCCACAAGGAAAAGGAAGTTCCTGAGAACTaGAAGTCTGGTTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: QSLWQQLGEQGPVVHKEKEVPEN*KSGCHE
Trigger: CTCATGACAACCAGACTTCCAGTTCTCAGGAACTTC...CTTTTCCTTGTGGACAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR TCA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCAGTTTGTTTCCATGGTaGGAGCCGGAGAACTGGATG +
Preference number: 4 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFSLFPW*EPENWM
Trigger: CATCCAGTTCTCCGGCTCTCACCATGGAAACAAACT...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATAGGACAGGGTGGGTTTaGTCTCCCTTCAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNRTGWV*SPFKEI
Trigger: TATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCT...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR GCA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATCCAAGGCAACTGCTCTaGATAACTAGTGACATGGAT +
Preference number: 4 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNPRQLL*ITSDMD
Trigger: ATCCATGTCACTAGTTATGCAGAGCAGTTGCCTTGG...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCGCTTAGAGCCTGGTaGGTGTTGAATTTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAAPLRAW*VLNFKE
Trigger: TTCTTTAAAATTCAACACCCACCAGGCTCTAAGCGG...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CCA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCTCGCCGCTTAGAGCCTaGTGGGTGTTGAATTTTAAA +
Preference number: 4 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFSPLRA*WVLNFK
Trigger: TTTAAAATTCAACACCCACCAGGCTCTAAGCGGCGA...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 90 bp TGCCCAGCCGCCGCCGCCCGCCCAGCCCCAGCCCCAGCCGCCAGGTaGCGGGTCCGGTGCTCCTGGAGCGCGGTAGCAGTAGACGCCGAA +
Preference number: 5 (lower is better)
Translates to: CPAAAARPAPAPAAR*RVRCSWSAVAVDAE
Trigger: TTCGGCGTCTACTGCTACCGCGCTCCAGGAGCACCGGACCCGGCACCTGGCGGCTGGGGCTGGGGCTGGGCGGGCGGCGGCGGCTGGGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 90 bp GCCGTCGGGTGGCGTCCGGGAAGCCGAGGCTGCGCACACCAGGCCTaGGGCCTCCGCAGCGCGCTCGCGGGTTCACGATGGGGTAGCGCG +
Preference number: 5 (lower is better)
Translates to: AVGWRPGSRGCAHQA*GLRSALAGSRWGSA
Trigger: CGCGCTACCCCATCGTGAACCCGCGAGCGCGCTGCGGAGGCCGCAGGCCTGGTGTGCGCAGCCTCGGCTTCCCGGACGCCACCCGACGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 90 bp CCAGTCCAGGCCGTCGCGCCAGGCCGCGTGCAGCTGTTCTGCAGATaGCAGGATGCCGTCCTGCTCGGCGCACGCGCGCTGCGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: PVQAVAPGRVQLFCR*QDAVLLGARALRLR
Trigger: GCGGAGGCGCAGCGCGCGTGCGCCGAGCAGGACGGCATCCTGGCATCTGCAGAACAGCTGCACGCGGCCTGGCGCGACGGCCTGGACTGG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS CCA 90 bp GGTCTAGCAGCTGCAGCTTCCACGCGGCGAACAGCTGCCCCACCTTaGCCACGGCCGCGCCACGCGCAGCACACGCGCGCGCAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: GLAAAASTRRTAAPP*PRPRHAQHTRAQLR
Trigger: CCGGAGCTGCGCGCGCGTGTGCTGCGCGTGGCGCGGCCGTGGCCAAGGTGGGGCAGCTGTTCGCCGCGTGGAAGCTGCAGCTGCTAGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 90 bp CATCCCCAGGCCCGTCGCCCTGCAGCTCAGCCCGCCCACGGTAGCTaGCGAATGCCCGGTGCTGGGGGCCTAGTGCCACGAAGACGTCGG +
Preference number: 5 (lower is better)
Translates to: HPQARRPAAQPAHGS*RMPGAGGLVPRRRR
Trigger: CCGACGTCTTCGTGGCACTAGGCCCCCAGCACCGGGCATTCGGCAGCTACCGTGGGCGGGCTGAGCTGCAGGGCGACGGGCCTGGGGATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS CCA 90 bp GTGCTCCTGGAGCGCGGTAGCAGTAGACGCCGAAGAGCCGTCGGGTaGCGTCCGGGAAGCCGAGGCTGCGCACACCAGGCCTGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: VLLERGSSRRRRAVG*RPGSRGCAHQACGL
Trigger: GAGGCCGCAGGCCTGGTGTGCGCAGCCTCGGCTTCCCGGACGCCACCCGACGGCTCTTCGGCGTCTACTGCTACCGCGCTCCAGGAGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 90 bp TGTTCTGCAGATGCCAGGATGCCGTCCTGCTCGGCGCACGCGCGCTaGGCCTCCGCGAAGGTCAGCTTGTATCGGCCTCCACGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: CSADARMPSCSAHAR*ASAKVSLYRPPRGW
Trigger: CCACCCCCGTGGAGGCCGATACAAGCTGACCTTCGCGGAGGCGCAGCGCGCGTGCGCCGAGCAGGACGGCATCCTGGCATCTGCAGAACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 90 bp CGCCAGGCCGCGTGCAGCTGTTCTGCAGATGCCAGGATGCCGTCCTaGTCGGCGCACGCGCGCTGCGCCTCCGCGAAGGTCAGCTTGTAT +
Preference number: 5 (lower is better)
Translates to: RQAACSCSADARMPS*SAHARCASAKVSLY
Trigger: ATACAAGCTGACCTTCGCGGAGGCGCAGCGCGCGTGCGCCGAGCAGGACGGCATCCTGGCATCTGCAGAACAGCTGCACGCGGCCTGGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 90 bp AGAAGGCGTCGTAGCGTTCCTCGGCGTTATGGCGATACCCGTAGTTaGGCAGGCCCCCGTTGGCATCACCGCCGCCCCCTGCACTCCCGG +
Preference number: 5 (lower is better)
Translates to: RRRRSVPRRYGDTRS*AGPRWHHRRPLHSR
Trigger: CCGGGAGTGCAGGGGGCGGCGGTGATGCCAACGGGGGCCTGCGCAACTACGGGTATCGCCATAACGCCGAGGAACGCTACGACGCCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGAACAGCTGCCCCACCTaGGCCACGGCCGCGCCACGC +
Preference number: 5 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEANSCPT*ATAAPR
Trigger: GCGTGGCGCGGCCGTGGCCAAGGTGGGGCAGCTGTT...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 90 bp CGTGGGCGGCTGCCTCATAGTGGTAGCGGCAGGGCAAGACGATGGTaGCACCACGGTGGCTTACCACCTGCCCAGGCGCTGTCTGTACCA +
Preference number: 5 (lower is better)
Translates to: RGRLPHSGSGRARRW*HHGGLPPAQALSVP
Trigger: TGGTACAGACAGCGCCTGGGCAGGTGGTAAGCCACCGTGGTGGCACCATCGTCTTGCCCTGCCGCTACCACTATGAGGCAGCCGCCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS GCA 90 bp CACCTTTGTCCACTTGAGCCGGACGCCGTCGTGACCGTGGGCGGCTaGCTCATAGTGGTAGCGGCAGGGCAAGACGATGGTGCCACCACG +
Preference number: 5 (lower is better)
Translates to: HLCPLEPDAVVTVGG*LIVVAAGQDDGATT
Trigger: CGTGGTGGCACCATCGTCTTGCCCTGCCGCTACCACTATGAGGCAGCCGCCCACGGTCACGACGGCGTCCGGCTCAAGTGGACAAAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS CCA 90 bp GACCGTGGGCGGCTGCCTCATAGTGGTAGCGGCAGGGCAAGACGATaGTGCCACCACGGTGGCTTACCACCTGCCCAGGCGCTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: DRGRLPHSGSGRARR*CHHGGLPPAQALSV
Trigger: TACAGACAGCGCCTGGGCAGGTGGTAAGCCACCGTGGTGGCACCATCGTCTTGCCCTGCCGCTACCACTATGAGGCAGCCGCCCACGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS-3UTR CAA 90 bp AGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTTCCGCGAAGGTCAGCTaGTATCGGCCTCCACGGGGG +
Preference number: 5 (lower is better)
Translates to: SQSRGSSHQATTGAVGLFSAKVS*YRPPRG
Trigger: CCCCCGTGGAGGCCGATACAAGCTGACCTTCGCGGA...AAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp AGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTCCGGAGAACTGGATGTaGGGTCACCCTGGCGACAGC +
Preference number: 5 (lower is better)
Translates to: SQSRGSSHQATTGAVGLFPENWM*GHPGDS
Trigger: GCTGTCGCCAGGGTGACCCAACATCCAGTTCTCCGG...AAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGATAGCGCCCGTAGTCTaGCAGCGTGACGTTGCGGAG +
Preference number: 5 (lower is better)
Translates to: GCWVTLATASGRVISMAVIAPVV*QRDVAE
Trigger: CTCCGCAACGTCACGCTGCAAGACTACGGGCGCTAT...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GGAGTGGGCCTGGGGACAGGGACAGTTTGTTTCCATGGTGAGAGCCGGAGAACTACGCGCCCCGGCAGGTaGGACGTGAAGCAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GVGLGTGTVCFHGESRRTTRPGR*DVKQKA
Trigger: CGCCTTCTGCTTCACGTCCAACCTGCCGGGGCGCGT...AGTTCTCCGGCTCTCACCATGGAAACAAACTGTCCCTGTCCCCAGGCCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GGATGTTGGGTCACCCTGGCGACAGCTTCGGGGAGGGTGATCTCCATGGCGGTGCGACCACGGGGGCAGTaGGTCTGTTTCCAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: GCWVTLATASGRVISMAVRPRGQ*VCFQVV
Trigger: GACCACTTGGAAACAGACCAACTGCCCCCGTGGTCG...CACCGCCATGGAGATCACCCTCCCCGAAGCTGTCGCCAGGGTGACCCAACATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp ACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTTTGCGCAGGCCCCCGTaGGCATCACCGCCGCCCCCT +
Preference number: 5 (lower is better)
Translates to: TAAIRHRVNVQTEGGLAALRRPP*ASPPPP
Trigger: AGGGGGCGGCGGTGATGCCAACGGGGGCCTGCGCAA...AGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGCTCTATGGCAACAGCTaGGTGAACAGGGCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEALYGNS*VNRAPL
Trigger: CAACGGGGCCCTGTTCACCAAGCTGTTGCCATAGAG...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp AGTCAATCCCGGGGGTCCAGCCACCAGGCGACCACGGGGGCAGTTGGTCTGTTTGAGAAAGTTGGGGAGTaGGGGGAATCCTCTATCCAG +
Preference number: 5 (lower is better)
Translates to: SQSRGSSHQATTGAVGLFEKVGE*GESSIQ
Trigger: CTGGATAGAGGATTCCCCCAACTCCCCAACTTTCTC...AAACAGACCAACTGCCCCCGTGGTCGCCTGGTGGCTGGACCCCCGGGATTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTACGGCCGGGATGGCCTaGTCCATGGATCATGTCCCC +
Preference number: 5 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSTAGMA*SMDHVP
Trigger: GGGGACATGATCCATGGACAAGGCCATCCCGGCCGT...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTTCTTGCAGCGTGACGTaGCGGAGGACCAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCSCSVT*RRTREA
Trigger: TGCCTCCCTGGTCCTCCGCAACGTCACGCTGCAAGA...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGGCAGGACTGGTTGCCTaGGTGACAGTGGGACCCAAG +
Preference number: 5 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKEAGLVA*VTVGPK
Trigger: CTTGGGTCCCACTGTCACCAAGGCAACCAGTCCTGC...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GACCCTGAAGTTCCTGTAGTCTCTCCAGGTGAGGAGGAGGGGGAGGAGGAGGCGAGAGGAGCTCAGTGCTaGCATATCTCAACAGACCAG +
Preference number: 5 (lower is better)
Translates to: DPEVPVVSPGEEEGEEEARGAQC*HISTDQ
Trigger: CTGGTCTGTTGAGATATGCAAGCACTGAGCTCCTCT...CGCCTCCTCCTCCCCCTCCTCCTCACCTGGAGAGACTACAGGAACTTCAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTGTGAACAGGGCCCCGTaGTCCACAAGGAAAAGCCTA +
Preference number: 5 (lower is better)
Translates to: GLFGDSWERDVRGQGGFAVNRAP*STRKSL
Trigger: TAGGCTTTTCCTTGTGGACAACGGGGCCCTGTTCAC...AGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GCCTGGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGGGGAAGATGGTCTGTTaGGTGACAGTTGGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: AWEDGLFGDSWERDVRGQGKMVC*VTVGKG
Trigger: CCCTTTCCCAACTGTCACCAAACAGACCATCTTCCC...CTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp AGAGTTAACGTGCAAACGGAGGGTGGCTTAGCAGCTCCAGAAGTCCAGCCCTGTAGGTTCAGAAGGAGTTaGTCACTTGGTCACACAGTG +
Preference number: 5 (lower is better)
Translates to: RVNVQTEGGLAAPEVQPCRFRRS*SLGHTV
Trigger: CACTGTGTGACCAAGTGACAAACTCCTTCTGAACCT...ACAGGGCTGGACTTCTGGAGCTGCTAAGCCACCCTCCGTTTGCACGTTAACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCCTCGGACTCCAGAGTTaGGTCACCATGGCAACAGTG +
Preference number: 5 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFLGLQS*VTMATV
Trigger: CACTGTTGCCATGGTGACCAAACTCTGGAGTCCGAG...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp CGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGTAGAGCCTGGTGGGTGTaGAATTTTAAAGAACATTCC +
Preference number: 5 (lower is better)
Translates to: RGPQNSPGTVGEHRFRRSRAWWV*NFKEHS
Trigger: GGAATGTTCTTTAAAATTCAACACCCACCAGGCTCT...ACTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GTTGGGAAAGGGACGTCAGAGGACAGGGTGGGTTTGCTCTCCCTTCAAAGAAATGTCATGAGGACAACGTaGACAGTCTCTATGGCAACA +
Preference number: 5 (lower is better)
Translates to: VGKGTSEDRVGLLSLQRNVMRTT*TVSMAT
Trigger: TGTTGCCATAGAGACTGTCAACGTTGTCCTCATGAC...ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTCTGACGTCCCTTTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp ACGGGGACCACAGAACAGCCCTGGTACAGTGGGAGAACACAGGTTCAGAAGGAGAGAAACAAGGATTTATaGAGCCCCTACTGTATGCTT +
Preference number: 5 (lower is better)
Translates to: TGTTEQPWYSGRTQVQKERNKDL*SPYCML
Trigger: AAGCATACAGTAGGGGCTCAATAAATCCTTGTTTCT...CTCCTTCTGAACCTGTGTTCTCCCACTGTACCAGGGCTGTTCTGTGGTCCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GACCTGGTCCCAAAACTCAGAGATAGGTTTCCTAGAGATGACGTGACAGTAAAGCCAGTCAGGACAGAGTaGACAAGGAGCAGACCCATG +
Preference number: 5 (lower is better)
Translates to: DLVPKLRDRFPRDDVTVKPVRTE*TRSRPM
Trigger: CATGGGTCTGCTCCTTGTCAACTCTGTCCTGACTGG...CTTTACTGTCACGTCATCTCTAGGAAACCTATCTCTGAGTTTTGGGACCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp AAGATTGTCTCGTGCACAGCTGCTATCCGGCATAGAGTTAACGTGCAAACGGAGTTCATGCCCTGGATCTaGTCAATGACCCAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: KIVSCTAAIRHRVNVQTEFMPWI*SMTQSG
Trigger: TCCTGACTGGGTCATTGACAAGATCCAGGGCATGAA...CTCCGTTTGCACGTTAACTCTATGCCGGATAGCAGCTGTGCACGAGACAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp CTGCCCTCAGCCCACATATTCATGTCAGGGAAAGTTTGTAATGTCTCTCCCTTCGAGGACAGGGTGGGTTaGCTCTCCCTTCAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: LPSAHIFMSGKVCNVSPFEDRVG*LSLQRN
Trigger: ATTTCTTTGAAGGGAGAGCAAACCCACCCTGTCCTC...GAAGGGAGAGACATTACAAACTTTCCCTGACATGAATATGTGGGCTGAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS-3UTR CAA 90 bp GCCTGGGAAGATGGTCTGTTTGGTGACAGTTGGGAAAGGGACGTCAGAGGACAGTCTCTTCATGCTTTGTaGTATCCTAGAAACTTCCAG +
Preference number: 5 (lower is better)
Translates to: AWEDGLFGDSWERDVRGQSLHAL*YPRNFQ
Trigger: CTGGAAGTTTCTAGGATACAACAAAGCATGAAGAGA...CTGTCCTCTGACGTCCCTTTCCCAACTGTCACCAAACAGACCATCTTCCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 72 bp GCCGCCGCCCGCCCAGCCCCAGCCCCAGCCGCCAGGTaGCGGGTCCGGTGCTCCTGGAGCGCGGTAGCAGTA +
Preference number: 6 (lower is better)
Translates to: AAARPAPAPAAR*RVRCSWSAVAV
Trigger: TACTGCTACCGCGCTCCAGGAGCACCGGACCCGGCACCTGGCGGCTGGGGCTGGGGCTGGGCGGGCGGCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS CCA 72 bp GCTGCAGCTTCCACGCGGCGAACAGCTGCCCCACCTTaGCCACGGCCGCGCCACGCGCAGCACACGCGCGCG +
Preference number: 6 (lower is better)
Translates to: AAASTRRTAAPP*PRPRHAQHTRA
Trigger: CGCGCGCGTGTGCTGCGCGTGGCGCGGCCGTGGCCAAGGTGGGGCAGCTGTTCGCCGCGTGGAAGCTGCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 72 bp TGGCGTCCGGGAAGCCGAGGCTGCGCACACCAGGCCTaGGGCCTCCGCAGCGCGCTCGCGGGTTCACGATGG +
Preference number: 6 (lower is better)
Translates to: WRPGSRGCAHQA*GLRSALAGSRW
Trigger: CCATCGTGAACCCGCGAGCGCGCTGCGGAGGCCGCAGGCCTGGTGTGCGCAGCCTCGGCTTCCCGGACGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS CAA 72 bp AGCTGCAGCTTCCACGCGGCGAACAGCTGCCCCACCTaGGCCACGGCCGCGCCACGCGCAGCACACGCGCGC +
Preference number: 6 (lower is better)
Translates to: SCSFHAANSCPT*ATAAPRAAHAR
Trigger: GCGCGCGTGTGCTGCGCGTGGCGCGGCCGTGGCCAAGGTGGGGCAGCTGTTCGCCGCGTGGAAGCTGCAGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS CAA 90 bp CGGTCTAGCAGCTGCAGCTTCCACGCGGCGAACAGCTGCCCCACCTaGGCCACGGCCGCGCCACGCGCAGCACACGCGCGCGCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: RSSSCSFHAANSCPT*ATAAPRAAHARAAP
Trigger: CGGAGCTGCGCGCGCGTGTGCTGCGCGTGGCGCGGCCGTGGCCAAGGTGGGGCAGCTGTTCGCCGCGTGGAAGCTGCAGCTGCTAGACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 72 bp CCCTCCAGCACGTGCACGACCTTCTTCCGGCCACGCTaGGCCCCCGCAGGGGCTGTGAGCAGCAGGACGCCC +
Preference number: 6 (lower is better)
Translates to: PSSTCTTFFRPR*APAGAVSSRTP
Trigger: GGGCGTCCTGCTGCTCACAGCCCCTGCGGGGGCGCAGCGTGGCCGGAAGAAGGTCGTGCACGTGCTGGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS GCA 72 bp GCCCGTCGCCCTGCAGCTCAGCCCGCCCACGGTAGCTaGCGAATGCCCGGTGCTGGGGGCCTAGTGCCACGA +
Preference number: 6 (lower is better)
Translates to: ARRPAAQPAHGS*RMPGAGGLVPR
Trigger: TCGTGGCACTAGGCCCCCAGCACCGGGCATTCGGCAGCTACCGTGGGCGGGCTGAGCTGCAGGGCGACGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS CCA 72 bp CCAGCCCCAGCCGCCAGGTGCCGGGTCCGGTGCTCCTaGAGCGCGGTAGCAGTAGACGCCGAAGAGCCGTCG +
Preference number: 6 (lower is better)
Translates to: PAPAARCRVRCS*SAVAVDAEEPS
Trigger: CGACGGCTCTTCGGCGTCTACTGCTACCGCGCTCCAGGAGCACCGGACCCGGCACCTGGCGGCTGGGGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 72 bp GTCCAGGCCGTCGCGCCAGGCCGCGTGCAGCTGTTCTaGAGATGCCAGGATGCCGTCCTGCTCGGCGCACGC +
Preference number: 6 (lower is better)
Translates to: VQAVAPGRVQLF*RCQDAVLLGAR
Trigger: GCGTGCGCCGAGCAGGACGGCATCCTGGCATCTGCAGAACAGCTGCACGCGGCCTGGCGCGACGGCCTGGAC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS CCA 72 bp GAGCGCGGTAGCAGTAGACGCCGAAGAGCCGTCGGGTaGCGTCCGGGAAGCCGAGGCTGCGCACACCAGGCC +
Preference number: 6 (lower is better)
Translates to: ERGSSRRRRAVG*RPGSRGCAHQA
Trigger: GGCCTGGTGTGCGCAGCCTCGGCTTCCCGGACGCCACCCGACGGCTCTTCGGCGTCTACTGCTACCGCGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS CCA 72 bp CGTTATGGCGATACCCGTAGTTGCGCAGGCCCCCGTTaGCATCACCGCCGCCCCCTGCACTCCCGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: RYGDTRSCAGPR*HHRRPLHSRSP
Trigger: GGGGGACCGGGAGTGCAGGGGGCGGCGGTGATGCCAACGGGGGCCTGCGCAACTACGGGTATCGCCATAACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 72 bp GATGCCAGGATGCCGTCCTGCTCGGCGCACGCGCGCTaGGCCTCCGCGAAGGTCAGCTTGTATCGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: DARMPSCSAHAR*ASAKVSLYRPP
Trigger: TGGAGGCCGATACAAGCTGACCTTCGCGGAGGCGCAGCGCGCGTGCGCCGAGCAGGACGGCATCCTGGCATC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 72 bp TCGGCCAGCCAACCCGCGGTGCAGCGGTCTAGCAGCTaGAGCTTCCACGCGGCGAACAGCTGCCCCACCTTG +
Preference number: 6 (lower is better)
Translates to: SASQPAVQRSSS*SFHAANSCPTL
Trigger: CAAGGTGGGGCAGCTGTTCGCCGCGTGGAAGCTGCAGCTGCTAGACCGCTGCACCGCGGGTTGGCTGGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 72 bp CGTAGCGTTCCTCGGCGTTATGGCGATACCCGTAGTTaGGCAGGCCCCCGTTGGCATCACCGCCGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: RSVPRRYGDTRS*AGPRWHHRRPL
Trigger: CAGGGGGCGGCGGTGATGCCAACGGGGGCCTGCGCAACTACGGGTATCGCCATAACGCCGAGGAACGCTACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291481.8
CDS GCA 72 bp CCACTTGAGCCGGACGCCGTCGTGACCGTGGGCGGCTaGCTCATAGTGGTAGCGGCAGGGCAAGACGATGGT +
Preference number: 6 (lower is better)
Translates to: PLEPDAVVTVGG*LIVVAAGQDDG
Trigger: ACCATCGTCTTGCCCTGCCGCTACCACTATGAGGCAGCCGCCCACGGTCACGACGGCGTCCGGCTCAAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS CCA 72 bp CGGCTGCCTCATAGTGGTAGCGGCAGGGCAAGACGATaGTGCCACCACGGTGGCTTACCACCTGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: RLPHSGSGRARR*CHHGGLPPAQA
Trigger: CGCCTGGGCAGGTGGTAAGCCACCGTGGTGGCACCATCGTCTTGCCCTGCCGCTACCACTATGAGGCAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS CAA 90 bp ATCTTCCAGCTCATTGGTGACTTCGCACTCATAGCGCCCGTAGTCTaGCAGCGTGACGTTGCGGAGGACCAGGGAGGCATCCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: IFQLIGDFALIAPVV*QRDVAEDQGGIPRP
Trigger: GGGCCTGGGGATGCCTCCCTGGTCCTCCGCAACGTCACGCTGCAAGACTACGGGCGCTATGAGTGCGAAGTCACCAATGAGCTGGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2
CDS CAA 72 bp CTCATTGGTGACTTCGCACTCATAGCGCCCGTAGTCTaGCAGCGTGACGTTGCGGAGGACCAGGGAGGCATC +
Preference number: 6 (lower is better)
Translates to: LIGDFALIAPVV*QRDVAEDQGGI
Trigger: GATGCCTCCCTGGTCCTCCGCAACGTCACGCTGCAAGACTACGGGCGCTATGAGTGCGAAGTCACCAATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291481.8
ENST00000592862.2