RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAPLN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000140511

Ensembl transcript IDs: ENST00000359595.8, ENST00000558770.5, ENST00000562281.1, ENST00000562889.5, ENST00000563808.1

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGAGGCCCTCTTCTTCCCCCAGGCTGAGGGGCAGGGAGAACTGTaGCCACCATGCCCGGACTCCCGGCGGCATTCTAGACAGGCCACC +
Preference number: 1 (lower is better)
Translates to: PEALFFPQAEGQGEL*PPCPDSRRHSRQAT
Trigger: GGTGGCCTGTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTGCCCCTCAGCCTGGGGGAAGAAGAGGGCCTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR CCA 90 bp CGATCTCACCAGGGCCGGAAGCCAGGCACCTGGGCAAAGCCAGGTTaGGCGGCAGAGAAGCCCATGGGCCCTGACAGTCAGCTTGCAGCC +
Preference number: 1 (lower is better)
Translates to: RSHQGRKPGTWAKPG*AAEKPMGPDSQLAA
Trigger: GGCTGCAAGCTGACTGTCAGGGCCCATGGGCTTCTCTGCCGCCCAACCTGGCTTTGCCCAGGTGCCTGGCTTCCGGCCCTGGTGAGATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR GCA 90 bp GGCCCGGAAGAGCTGCTCAAAGGAGGCCACCACCGCAGCCTGCTCTaGACAGACCTGCTGGCCCTCGTGGAAGTTGAACTGGTAGCGCCC +
Preference number: 1 (lower is better)
Translates to: GPEELLKGGHHRSLL*TDLLALVEVELVAP
Trigger: GGGCGCTACCAGTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTGGTGGCCTCCTTTGAGCAGCTCTTCCGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 90 bp CCGCCCACTCTGGGCACCAACCTCCTTAAGGGAGGGAGACCAGCCTaGATGGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAAATGGC +
Preference number: 1 (lower is better)
Translates to: PPTLGTNLLKGGRPA*MAGNPPEAHKTANG
Trigger: GCCATTTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTCTCCCTCCCTTAAGGAGGTTGGTGCCCAGAGTGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR CCA 90 bp AGCCAGGCACCTGGGCAAAGCCAGGTTGGGCGGCAGAGAAGCCCATaGGCCCTGACAGTCAGCTTGCAGCCTCTACGTGTGTTTGCAGGG +
Preference number: 1 (lower is better)
Translates to: SQAPGQSQVGRQRSP*ALTVSLQPLRVFAG
Trigger: CCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCTTCTCTGCCGCCCAACCTGGCTTTGCCCAGGTGCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR TCA 90 bp ACACTTTGGAATCTCCTCCGTGTGGCCAAGGACCCAGGAACAGCCTaGGCCCCAAACCTCCGATCTCACCAGGGCCGGAAGCCAGGCACC +
Preference number: 1 (lower is better)
Translates to: TLWNLLRVAKDPGTA*APNLRSHQGRKPGT
Trigger: GGTGCCTGGCTTCCGGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCTGTTCCTGGGTCCTTGGCCACACGGAGGAGATTCCAAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR TCA 90 bp CCACCGCAGCCTGCTCTGCACAGACCTGCTGGCCCTCGTGGAAGTTaGACTGGTAGCGCCCGTTGGGGGACTGGTAAGGAAAGACCACAC +
Preference number: 1 (lower is better)
Translates to: PPQPALHRPAGPRGS*TGSARWGTGKERPH
Trigger: GTGTGGTCTTTCCTTACCAGTCCCCCAACGGGCGCTACCAGTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 90 bp CCACTCTGGGCACCAACCTCCTTAAGGGAGGGAGACCAGCCTGGATaGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAAATGGCCCAG +
Preference number: 1 (lower is better)
Translates to: PLWAPTSLREGDQPG*RGTLQKPTKPQMAQ
Trigger: CTGGGCCATTTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTCTCCCTCCCTTAAGGAGGTTGGTGCCCAGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR CCA 90 bp GGTCCAGGCCATGGAACTTCCAGGCGGCAAAGAGCTGTCCCACCTTaGCGATCGTGGCATCATCTTCCTGGCAGGCCTCCCTTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: GPGHGTSRRQRAVPP*RSWHHLPGRPPLPL
Trigger: CAGAGGCAAGGGAGGCCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGGGACAGCTCTTTGCCGCCTGGAAGTTCCATGGCCTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR TCA 90 bp CACCTGGGCAAAGCCAGGTTGGGCGGCAGAGAAGCCCATGGGCCCTaGCAGTCAGCTTGCAGCCTCTACGTGTGTTTGCAGGGGGACTAT +
Preference number: 1 (lower is better)
Translates to: HLGKARLGGREAHGP*QSACSLYVCLQGDY
Trigger: ATAGTCCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCTTCTCTGCCGCCCAACCTGGCTTTGCCCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 90 bp GTGACCCTAGGGGTCTGGGAAGGACACTTTGGAATCTCCTCCGTGTaGCCAAGGACCCAGGAACAGCCTGAGCCCCAAACCTCCGATCTC +
Preference number: 1 (lower is better)
Translates to: VTLGVWEGHFGISSV*PRTQEQPEPQTSDL
Trigger: GAGATCGGAGGTTTGGGGCTCAGGCTGTTCCTGGGTCCTTGGCCACACGGAGGAGATTCCAAAGTGTCCTTCCCAGACCCCTAGGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR GCA 90 bp AAGCCCATGGGCCCTGACAGTCAGCTTGCAGCCTCTACGTGTGTTTaGAGGGGGACTATTTCATGCCTGGTTCCACCCCAAATTCCTAGC +
Preference number: 1 (lower is better)
Translates to: KPMGPDSQLAASTCV*RGTISCLVPPQIPS
Trigger: GCTAGGAATTTGGGGTGGAACCAGGCATGAAATAGTCCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 90 bp CTGGTAAGGAAAGACCACACCTCCTGTCCGTTGCCGCCTCTCTCCTaGGACTCAGCTGGTTCACAGCAGTACTCAGAAAACATCCATGAG +
Preference number: 1 (lower is better)
Translates to: LVRKDHTSCPLPPLS*DSAGSQQYSENIHE
Trigger: CTCATGGATGTTTTCTGAGTACTGCTGTGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTGGTCTTTCCTTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 90 bp GAATGCGGCCCCTCTGAGCCACCATGTAAGCCATGTGGACACTGGTaGCAAAGACAGAGAACGCATTTTAAGGACATACATCTTATCCTC +
Preference number: 1 (lower is better)
Translates to: ECGPSEPPCKPCGHW*QRQRTHFKDIHLIL
Trigger: GAGGATAAGATGTATGTCCTTAAAATGCGTTCTCTGTCTTTGCCACCAGTGTCCACATGGCTTACATGGTGGCTCAGAGGGGCCGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 90 bp GAGGAATGCGGCCCCTCTGAGCCACCATGTAAGCCATGTGGACACTaGTGGCAAAGACAGAGAACGCATTTTAAGGACATACATCTTATC +
Preference number: 1 (lower is better)
Translates to: EECGPSEPPCKPCGH*WQRQRTHFKDIHLI
Trigger: GATAAGATGTATGTCCTTAAAATGCGTTCTCTGTCTTTGCCACCAGTGTCCACATGGCTTACATGGTGGCTCAGAGGGGCCGCATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR TCA 90 bp GCCAGTGAGGGAATGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCCTTCTTCCCCCAGGCTaGGGGGCAGGGAGAACTGTG +
Preference number: 2 (lower is better)
Translates to: ASEGMRQGRAPGPSAGGSLLPPG*GAGRTV
Trigger: CACAGTTCTCCCTGCCCCTCAGCCTGGGGGAAGAAG...GCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCATTCCCTCACTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR GCA 90 bp GCCAGTGAGGGAATGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCTCTCTAGGCTGCCCCTaGAGACCCCAGACCAATGAC +
Preference number: 2 (lower is better)
Translates to: ASEGMRQGRAPGPSAGGSSLGCP*RPQTND
Trigger: GTCATTGGTCTGGGGTCTGCAGGGGCAGCCTAGAGA...GCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCATTCCCTCACTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp CACCGTACAAGCGGCTCTGCGGGTCGGGGAAGCCAAAGCTTCGGACCCCAGGCTGACAGGCCCGGGCTTTaGGCTCTAGGGGCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: HRTSGSAGRGSQSFGPQADRPGL*ALGARF
Trigger: AAACCTGGCCCCTAGAGCCCAAAGCCCGGGCCTGTC...AGCCTGGGGTCCGAAGCTTTGGCTTCCCCGACCCGCAGAGCCGCTTGTACGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR GCA 90 bp GCCAGGCCCGGGCCACCGCAGGGCTGCCGGGGCAACATGATGGGGTACTGCACCGCCTCTACGTGTGTTTaGAGGGGGACTATTTCATGC +
Preference number: 2 (lower is better)
Translates to: ARPGPPQGCRGNMMGYCTASTCV*RGTISC
Trigger: GCATGAAATAGTCCCCCTGCAAACACACGTAGAGGC...GGTGCAGTACCCCATCATGTTGCCCCGGCAGCCCTGCGGTGGCCCGGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp CGGCAAAGAGCTGTCCCACCTTGGCGATCGTGGCATCATCTTCCTGGCAGGCCTGCCCTAGCCCCTCAGTaGGCAGACTGGGGTCAGCGG +
Preference number: 2 (lower is better)
Translates to: RQRAVPPWRSWHHLPGRPALAPQ*ADWGQR
Trigger: CCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGC...AGGCCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGGGACAGCTCTTTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp GCCAGGCCCGGGCCACCGCAGGGCTGCCGGGGCAACATGATGGGGTACTGCACCCCATGTGGACACTGGTaGCAAAGACAGAGAACGCAT +
Preference number: 2 (lower is better)
Translates to: ARPGPPQGCRGNMMGYCTPCGHW*QRQRTH
Trigger: ATGCGTTCTCTGTCTTTGCCACCAGTGTCCACATGG...GGTGCAGTACCCCATCATGTTGCCCCGGCAGCCCTGCGGTGGCCCGGGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR TCA 90 bp CCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGCAGCTTCTTCCCCCAGGCTaGGGGGCAGGGAGAACTGTG +
Preference number: 2 (lower is better)
Translates to: PSVGRLGSAASQRSRGGQLLPPG*GAGRTV
Trigger: CACAGTTCTCCCTGCCCCTCAGCCTGGGGGAAGAAG...CTGCCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR-3UTR CCA 90 bp CACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCACAGCAGGGAGACCAGCCTGGATaGCGGGGAACCCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: HTSCPLPPLSWDSAGSQQGDQPG*RGTLQK
Trigger: CTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTCTCC...CTGCTGTGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CAA 90 bp CGGTCCAGGCCATGGAACTTCCAGGCGGCAAAGAGCTGTCCCACCTaGGCGATCGTGGCATCATCTTCCTGGCAGGCCTCCCTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: RSRPWNFQAAKSCPT*AIVASSSWQASLAS
Trigger: AGAGGCAAGGGAGGCCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGGGACAGCTCTTTGCCGCCTGGAAGTTCCATGGCCTGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR GCA 90 bp GCCAGTGAGGGAATGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCTCTCCCCAACTCCACTaGCACCCCAACTTCAAGAAT +
Preference number: 2 (lower is better)
Translates to: ASEGMRQGRAPGPSAGGSSPQLH*HPNFKN
Trigger: ATTCTTGAAGTTGGGGTGGCAGTGGAGTTGGGGAGA...GCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCATTCCCTCACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp GGCAGTAGCGAAGCAGAATACATCATAGCGGTGCAGGCGGCGGTGGCGGGGGCCCCACAAAACCGCAAATaGCCCAGGGGAGCAAGCATG +
Preference number: 2 (lower is better)
Translates to: GSSEAEYIIAVQAAVAGAPQNRK*PRGASM
Trigger: CATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGG...GGCCCCCGCCACCGCCGCCTGCACCGCTATGATGTATTCTGCTTCGCTACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp TGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCAGTAAACACCGTATTGAAGCCCCGGGAATaGGGTGAGGGCTCCCTGTTT +
Preference number: 2 (lower is better)
Translates to: CGRGGPQVLVLAVAVNTVLKPRE*GEGSLF
Trigger: AAACAGGGAGCCCTCACCCCATTCCCGGGGCTTCAA...TACGGTGTTTACTGCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp GGCAGTAGCGAAGCAGAATACATCATAGCGGTGCAGGCGGCGGTGGCGGGGGCCTCCCCACTCGTTAGCTaGGACCCGATCGTCTACGTT +
Preference number: 2 (lower is better)
Translates to: GSSEAEYIIAVQAAVAGASPLVS*DPIVYV
Trigger: AACGTAGACGATCGGGTCCCAGCTAACGAGTGGGGA...GGCCCCCGCCACCGCCGCCTGCACCGCTATGATGTATTCTGCTTCGCTACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp AAAGAGCTGTCCCACCTTGGCGATCGTGGCATCATCTTCCTGGCAGGCCTCCCTAAGGGCAGGGAGGTCTaGGGCAGGCGGTTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: KELSHLGDRGIIFLAGLPKGREV*GRRFLS
Trigger: GGAGAGAAACCGCCTGCCCCAGACCTCCCTGCCCTT...AGGGAGGCCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGGGACAGCTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CAA 90 bp AGCCAGGTTGGGCGGCAGAGAAGCCCATGGGCCCTGACAGTCAGCTaGCAGCCTCTACGTGTGTTTGCAGGGGGACTATTTCATGCCTGG +
Preference number: 2 (lower is better)
Translates to: SQVGRQRSPWALTVS*QPLRVFAGGLFHAW
Trigger: CCAGGCATGAAATAGTCCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCTTCTCTGCCGCCCAACCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CAA 90 bp GTCCCACCTTGGCGATCGTGGCATCATCTTCCTGGCAGGCCTCCCTaGCCTCTGTCAGCGTCAGCTTCTCAGGGTGCTCCAGGTAGTACA +
Preference number: 2 (lower is better)
Translates to: VPPWRSWHHLPGRPP*PLSASASQGAPGST
Trigger: TGTACTACCTGGAGCACCCTGAGAAGCTGACGCTGACAGAGGCAAGGGAGGCCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp CCAGCCTGGATGGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAAATGGCCCAAGCAAGCATGATTCCTaGAGTGGGGCATCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: PAWMAGNPPEAHKTANGPSKHDS*SGASRS
Trigger: GCTCCTGGATGCCCCACTCCAGGAATCATGCTTGCT...TGGGCCATTTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR-3UTR CCA 90 bp AGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGAGCAAGCATGATTCCTaGAGTGGGGCATCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SPSVGRLGSAASQRSRGGSKHDS*SGASRS
Trigger: GCTCCTGGATGCCCCACTCCAGGAATCATGCTTGCT...CCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR-3UTR TCA 90 bp AGCCCATGGGCCCTGACAGTCAGCTTGCAGCCTCTACGTGTGTTTGCAGGGGGAACCCCATTTTACACCTaGGAGGCCCAGGGCTCTAAG +
Preference number: 2 (lower is better)
Translates to: SPWALTVSLQPLRVFAGGTPFYT*EAQGSK
Trigger: CTTAGAGCCCTGGGCCTCTCAGGTGTAAAATGGGGT...TCCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp CATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCACACAGGGAAACAGCCCTAGCCCCTCAGTaGGCAGACTGGGGTCAGCGG +
Preference number: 2 (lower is better)
Translates to: HLLSKVHTPEGPSPHRETALAPQ*ADWGQR
Trigger: CCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGC...TGTTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR-3UTR TCA 90 bp CCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGCAGTCCACGTGTGGCAGATaGTTTTCAGGAGAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: PSVGRLGSAASQRSRGGQSTCGR*FSGEGE
Trigger: CTCTCCTTCTCCTGAAAATCATCTGCCACACGTGGA...CTGCCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR TCA 90 bp GGCAGTAGCGAAGCAGAATACATCATAGCGGTGCAGGCGGCGGTGGCGGGGGCCAAGGAGGAAAGATTGTaGTACCCCATTTTACACCTG +
Preference number: 2 (lower is better)
Translates to: GSSEAEYIIAVQAAVAGAKEERL*YPILHL
Trigger: CAGGTGTAAAATGGGGTATCACAATCTTTCCTCCTT...GGCCCCCGCCACCGCCGCCTGCACCGCTATGATGTATTCTGCTTCGCTACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR GCA 90 bp ACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCACACAGGGAAACAGGCCCGGAAGAGCTaGTCAAAGGAGGCCACCACC +
Preference number: 2 (lower is better)
Translates to: TIYCPKYTHLRAPPHTGKQARKS*SKEATT
Trigger: GGTGGTGGCCTCCTTTGAGCAGCTCTTCCGGGCCTG...TTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp AAAGACCACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCAGTGACCCTAGGGGTCTaGGAAGGACACTTTGGAATC +
Preference number: 2 (lower is better)
Translates to: KDHTSCPLPPLSWDSAGSVTLGV*EGHFGI
Trigger: GATTCCAAAGTGTCCTTCCCAGACCCCTAGGGTCAC...TGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTGGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR GCA 90 bp CCTAATCCGCAAGGCTGTCGCCAGACCCCCAGTGAGGCTGTGCCATCTTCTCCAAGGGGGACTATTTCATaGCTGGTTCCACCCCAAATT +
Preference number: 2 (lower is better)
Translates to: PNPQGCRQTPSEAVPSSPRGTIS*LVPPQI
Trigger: AATTTGGGGTGGAACCAGGCATGAAATAGTCCCCCT...TGGAGAAGATGGCACAGCCTCACTGGGGGTCTGGCGACAGCCTTGCGGATTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR TCA 90 bp AAAGAGCTGTCCCACCTTGGCGATCGTGGCATCATCTTCCTGGCAGGCCTCCCTAGAGGCCACAGGCCCTaGAAAGATATGTTCGTGTTT +
Preference number: 2 (lower is better)
Translates to: KELSHLGDRGIIFLAGLPRGHRP*KDMFVF
Trigger: AAACACGAACATATCTTTTCAGGGCCTGTGGCCTCT...AGGGAGGCCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGGGACAGCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp AGATGTAGTCTCTACCAAGTCAATGAAACCTTAGGGAGTGGAGGTGACCCTAGGCCTCAGTGGGCAGACTaGGGTCAGCGGCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: RCSLYQVNETLGSGGDPRPQWAD*GQRLHR
Trigger: TCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGG...CCTAGGGTCACCTCCACTCCCTAAGGTTTCATTGACTTGGTAGAGACTACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp ACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCACACAGGGAAACTCCTGGGACTCAGCTaGTTCACAGCAGTACTCAGA +
Preference number: 2 (lower is better)
Translates to: TIYCPKYTHLRAPPHTGKLLGLS*FTAVLR
Trigger: TCTGAGTACTGCTGTGAACCAGCTGAGTCCCAGGAG...TTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR GCA 90 bp CATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCACACAGGGAAACACAGACCAATGACTCTTaGAGGTTCTCCCCAACTCCA +
Preference number: 2 (lower is better)
Translates to: HLLSKVHTPEGPSPHRETQTNDS*RFSPTP
Trigger: TGGAGTTGGGGAGAACCTGCAAGAGTCATTGGTCTG...TGTTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CCA 90 bp GTACACACACCTGAGGGCCCCTCCCCACACAGGGAAACAGGAGAAACAAATGACGGACTATTTCATGCCTaGTTCCACCCCAAATTCCTA +
Preference number: 2 (lower is better)
Translates to: VHTPEGPSPHRETGETNDGLFHA*FHPKFL
Trigger: TAGGAATTTGGGGTGGAACCAGGCATGAAATAGTCC...GTCATTTGTTTCTCCTGTTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR TCA 72 bp AGACAGGCCCGGGCTTTGGGCTCTAGGGGCCAGGTTTaGCTCCCAGCTCCCCACTCGTTAGCTGGGACCCGA +
Preference number: 3 (lower is better)
Translates to: RQARALGSRGQV*LPAPHSLAGTR
Trigger: TCGGGTCCCAGCTAACGAGTGGGGAGCTGGGAGTCAAACCTGGCCCCTAGAGCCCAAAGCCCGGGCCTGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR GCA 72 bp CTCTTCTTCCCCCAGGCTGAGGGGCAGGGAGAACTGTaGCCACCATGCCCGGACTCCCGGCGGCATTCTAGA +
Preference number: 3 (lower is better)
Translates to: LFFPQAEGQGEL*PPCPDSRRHSR
Trigger: TCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTGCCCCTCAGCCTGGGGGAAGAAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR GCA 72 bp ATCCGCAAGGCTGTCGCCAGACCCCCAGTGAGGCTGTaGCATCTTCTCCAGACAGGCCCGGGCTTTGGGCTC +
Preference number: 3 (lower is better)
Translates to: IRKAVARPPVRL*HLLQTGPGFGL
Trigger: GAGCCCAAAGCCCGGGCCTGTCTGGAGAAGATGGCACAGCCTCACTGGGGGTCTGGCGACAGCCTTGCGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 72 bp AACCTCCGATCTCACCAGGGCCGGAAGCCAGGCACCTaGGCAAAGCCAGGTTGGGCGGCAGAGAAGCCCATG +
Preference number: 3 (lower is better)
Translates to: NLRSHQGRKPGT*AKPGWAAEKPM
Trigger: CATGGGCTTCTCTGCCGCCCAACCTGGCTTTGCCCAGGTGCCTGGCTTCCGGCCCTGGTGAGATCGGAGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR TCA 72 bp AATCTCCTCCGTGTGGCCAAGGACCCAGGAACAGCCTaGGCCCCAAACCTCCGATCTCACCAGGGCCGGAAG +
Preference number: 3 (lower is better)
Translates to: NLLRVAKDPGTA*APNLRSHQGRK
Trigger: CTTCCGGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCTGTTCCTGGGTCCTTGGCCACACGGAGGAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR GCA 72 bp GAGCTGCTCAAAGGAGGCCACCACCGCAGCCTGCTCTaGACAGACCTGCTGGCCCTCGTGGAAGTTGAACTG +
Preference number: 3 (lower is better)
Translates to: ELLKGGHHRSLL*TDLLALVEVEL
Trigger: CAGTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTGGTGGCCTCCTTTGAGCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 72 bp AACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTaGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: NWLPALAPQWAD*GQRLHREVEVG
Trigger: GCCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR-3UTR CAA 90 bp GCCAGTGAGGGAATGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCAACAAAACAGATTCTTaGGAACCGAGAGGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: ASEGMRQGRAPGPSAGGSNKTDS*EPRGEG
Trigger: CCCTTCCCCTCTCGGTTCCAAAGAATCTGTTTTGTT...GCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCATTCCCTCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 72 bp GCACCAACCTCCTTAAGGGAGGGAGACCAGCCTGGATaGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAA +
Preference number: 3 (lower is better)
Translates to: APTSLREGDQPG*RGTLQKPTKPQ
Trigger: TTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTCTCCCTCCCTTAAGGAGGTTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR CCA 72 bp GGGGTCTGGGAAGGACACTTTGGAATCTCCTCCGTGTaGCCAAGGACCCAGGAACAGCCTGAGCCCCAAACC +
Preference number: 3 (lower is better)
Translates to: GVWEGHFGISSV*PRTQEQPEPQT
Trigger: GGTTTGGGGCTCAGGCTGTTCCTGGGTCCTTGGCCACACGGAGGAGATTCCAAAGTGTCCTTCCCAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CAA 90 bp CCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGCAGAAGAGCTGTCCCACCTaGGCGATCGTGGCATCATCT +
Preference number: 3 (lower is better)
Translates to: PSVGRLGSAASQRSRGGQKSCPT*AIVASS
Trigger: AGATGATGCCACGATCGCCAAGGTGGGACAGCTCTT...CTGCCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CAA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAAGCCTCTACGTGTGTTaGCAGGGGGACTATTTCATG +
Preference number: 3 (lower is better)
Translates to: GSLELASSPSPSVGRLGSSLYVC*QGDYFM
Trigger: CATGAAATAGTCCCCCTGCAAACACACGTAGAGGCT...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CAA 90 bp TTTGGAATCTCCTCCGTGTGGCCAAGGACCCAGGAACAGCCTGAGCCCCAAACCGCCCTGACAGTCAGCTaGCAGCCTCTACGTGTGTTT +
Preference number: 3 (lower is better)
Translates to: FGISSVWPRTQEQPEPQTALTVS*QPLRVF
Trigger: AAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGC...GGTTTGGGGCTCAGGCTGTTCCTGGGTCCTTGGCCACACGGAGGAGATTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 72 bp AAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTaGAGTGGGGCATCCAGGAGCAAAGGGAGGCATTGG +
Preference number: 3 (lower is better)
Translates to: KPQMAQGSKHDS*SGASRSKGRHW
Trigger: CCAATGCCTCCCTTTGCTCCTGGATGCCCCACTCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
3UTR GCA 72 bp CAACTCCACTGCCACCCCAACTTCAAGAATGAGGAATaGGGCCCCTCTGAGCCACCATGTAAGCCATGTGGA +
Preference number: 3 (lower is better)
Translates to: QLHCHPNFKNEE*GPSEPPCKPCG
Trigger: TCCACATGGCTTACATGGTGGCTCAGAGGGGCCGCATTCCTCATTCTTGAAGTTGGGGTGGCAGTGGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 72 bp AAAGACCACACCTCCTGTCCGTTGCCGCCTCTCTCCTaGGACTCAGCTGGTTCACAGCAGTACTCAGAAAAC +
Preference number: 3 (lower is better)
Translates to: KDHTSCPLPPLS*DSAGSQQYSEN
Trigger: GTTTTCTGAGTACTGCTGTGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTGGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR-3UTR CAA 90 bp CCTAATCCGCAAGGCTGTCGCCAGACCCCCAGTGAGGCTGTGCCATCTTCTCCATACATCTTATCCTCATaGCCTCTGAGGGAGGTAAAG +
Preference number: 3 (lower is better)
Translates to: PNPQGCRQTPSEAVPSSPYILSS*PLREVK
Trigger: CTTTACCTCCCTCAGAGGCAATGAGGATAAGATGTA...TGGAGAAGATGGCACAGCCTCACTGGGGGTCTGGCGACAGCCTTGCGGATTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 72 bp GGGCCAGGTTTGACTCCCAGCTCCCCACTCGTTAGCTaGGACCCGATCGTCTACGTTATTATGAATGTGGAA +
Preference number: 3 (lower is better)
Translates to: GPGLTPSSPLVS*DPIVYVIMNVE
Trigger: TTCCACATTCATAATAACGTAGACGATCGGGTCCCAGCTAACGAGTGGGGAGCTGGGAGTCAAACCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR TCA 72 bp TCATTGCCTCTGAGGGAGGTAAAGGAGGAAAGATTGTaGTACCCCATTTTACACCTGAGAGGCCCAGGGCTC +
Preference number: 3 (lower is better)
Translates to: SLPLREVKEERL*YPILHLRGPGL
Trigger: GAGCCCTGGGCCTCTCAGGTGTAAAATGGGGTATCACAATCTTTCCTCCTTTACCTCCCTCAGAGGCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 72 bp GGCCCCTCTGAGCCACCATGTAAGCCATGTGGACACTaGTGGCAAAGACAGAGAACGCATTTTAAGGACATA +
Preference number: 3 (lower is better)
Translates to: GPSEPPCKPCGH*WQRQRTHFKDI
Trigger: TATGTCCTTAAAATGCGTTCTCTGTCTTTGCCACCAGTGTCCACATGGCTTACATGGTGGCTCAGAGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CCA 72 bp CCCTCTGAGCCACCATGTAAGCCATGTGGACACTGGTaGCAAAGACAGAGAACGCATTTTAAGGACATACAT +
Preference number: 3 (lower is better)
Translates to: PSEPPCKPCGHW*QRQRTHFKDIH
Trigger: ATGTATGTCCTTAAAATGCGTTCTCTGTCTTTGCCACCAGTGTCCACATGGCTTACATGGTGGCTCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp GGCAGTAGCGAAGCAGAATACATCATAGCGGTGCAGGCGGCGGTGGCGGGGGCCGCTTCGCACGCCAGGTaGCAGGCCCGGGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: GSSEAEYIIAVQAAVAGAASHAR*QARATA
Trigger: TGCGGTGGCCCGGGCCTGGCACCTGGCGTGCGAAGC...GGCCCCCGCCACCGCCGCCTGCACCGCTATGATGTATTCTGCTTCGCTACTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp GCCAGTGAGGGAATGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCGGGCAGGGAGAACTGTaGCCACCATGCCCGGACTCC +
Preference number: 4 (lower is better)
Translates to: ASEGMRQGRAPGPSAGGSGQGEL*PPCPDS
Trigger: GGAGTCCGGGCATGGTGGGCACAGTTCTCCCTGCCC...GCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCATTCCCTCACTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp AGCCTGAGCCCCAAACCTCCGATCTCACCAGGGCCGGAAGCCAGGCACCTGGGCTCCCCAAAGGAGCGGTaGCTCAGCCCGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: SLSPKPPISPGPEARHLGSPKER*LSPMAT
Trigger: GGTGGCCATCGGGCTGAGGCACCGCTCCTTTGGGGA...GCCCAGGTGCCTGGCTTCCGGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp GCCAGGCCCGGGCCACCGCAGGGCTGCCGGGGCAACATGATGGGGTACTGCACCTGCTCTGCACAGACCTaGTGGCCCTCGTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ARPGPPQGCRGNMMGYCTCSAQT*WPSWKL
Trigger: CAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCA...GGTGCAGTACCCCATCATGTTGCCCCGGCAGCCCTGCGGTGGCCCGGGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp AGCCTGAGCCCCAAACCTCCGATCTCACCAGGGCCGGAAGCCAGGCACCTGGGCTGCACCGTGGCATCCTaGAGCCAGCCCGCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: SLSPKPPISPGPEARHLGCTVAS*SQPALH
Trigger: GTGCAACGCGGGCTGGCTGCAGGATGCCACGGTGCA...GCCCAGGTGCCTGGCTTCCGGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCTTCGCACGCCAGGTaGCAGGCCCGGGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: GSLELASSPSPSVGRLGSASHAR*QARATA
Trigger: TGCGGTGGCCCGGGCCTGGCACCTGGCGTGCGAAGC...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp CAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCGGGCCACCGCAGGGCTaGCGGGGCAACATGATGGGG +
Preference number: 4 (lower is better)
Translates to: QLSPGSLELASSPSPSVGGPPQG*RGNMMG
Trigger: CCCCATCATGTTGCCCCGGCAGCCCTGCGGTGGCCC...GCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp CAGGGAGAACTGTGCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACAGGCCGCGGACGCTACCATCTaGCAGCCAGCCAGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: QGELCPPCPDSRRHSRQAADATI*QPASVA
Trigger: TGCGACGCTGGCTGGCTGGCAGATGGTAGCGTCCGC...GGCCTGTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp GCCAGGCCCGGGCCACCGCAGGGCTGCCGGGGCAACATGATGGGGTACTGCACCTCTGCACAGACCTGCTaGCCCTCGTGGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: ARPGPPQGCRGNMMGYCTSAQTC*PSWKLN
Trigger: GTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGA...GGTGCAGTACCCCATCATGTTGCCCCGGCAGCCCTGCGGTGGCCCGGGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp CAGGGAGAACTGTGCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACAGGCCCTTCTTCCCCCAGGCTaGGGGGCAGGGAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: QGELCPPCPDSRRHSRQALLPPG*GAGRTV
Trigger: CACAGTTCTCCCTGCCCCTCAGCCTGGGGGAAGAAG...GGCCTGTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp TGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCAGTAAACACCGTAGCGGACGCTACCATCTaGCAGCCAGCCAGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: CGRGGPQVLVLAVAVNTVADATI*QPASVA
Trigger: TGCGACGCTGGCTGGCTGGCAGATGGTAGCGTCCGC...TACGGTGTTTACTGCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GACCAGCCTGGATGGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAAATGGCCGCCCTAGCCCCTCAGTaGGCAGACTGGGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: DQPGWRGTLQKPTKPQMAALAPQ*ADWGQR
Trigger: CCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGC...GGCCATTTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGCAGGCCCTAGCCCCTCAGTaGGCAGACTGGGGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: PSVGRLGSAASQRSRGGQALAPQ*ADWGQR
Trigger: CCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGC...CTGCCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp CAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCTGCACCGTGGCATCCTaGAGCCAGCCCGCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: QLSPGSLELASSPSPSVGCTVAS*SQPALH
Trigger: GTGCAACGCGGGCTGGCTGCAGGATGCCACGGTGCA...GCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCATGGCCCCTTGGTAGGTaGACAGGGTCTCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: GSLELASSPSPSVGRLGSWPLGR*TGSPRV
Trigger: CACCCGAGGAGACCCTGTTCACCTACCAAGGGGCCA...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp CCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAACAGCTTCCACCATTTaGCACGCACACGCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: PALAPQWADWGQRLHREVTASTI*HAHAAG
Trigger: CCCCGCGGCGTGTGCGTGTCAAATGGTGGAAGCTGT...TACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp ACCACCGCAGCCTGCTCTGCACAGACCTGCTGGCCCTCGTGGAAGTTGAACTGGCCTCCAGCCCGTCAATaGCCTCACAGCGGTAACGCC +
Preference number: 4 (lower is better)
Translates to: TTAACSAQTCWPSWKLNWPPARQ*PHSGNA
Trigger: GGCGTTACCGCTGTGAGGTCATTGACGGGCTGGAGG...CCAGTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGGCCCTCGTGGAAGTTaGACTGGTAGCGCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GSLELASSPSPSVGRLGSGPRGS*TGSARW
Trigger: CCAACGGGCGCTACCAGTTCAACTTCCACGAGGGCC...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp AGCCCATGGGCCCTGACAGTCAGCTTGCAGCCTCTACGTGTGTTTGCAGGGGGAGCTGCCGGGGCAACATaGTGGGGTACTGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: SPWALTVSLQPLRVFAGGAAGAT*WGTAPW
Trigger: CCACGGTGCAGTACCCCATCATGTTGCCCCGGCAGC...TCCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp TCCTTCCCTCAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCCACCGCAGCCTGCTCTaGACAGACCTGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SFPQLSPGSLELASSPSPHRSLL*TDLLAL
Trigger: GAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTG...GGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTGAGGGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCACAGGCCCGGAAGAGCTaGTCAAAGGAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: GSLELASSPSPSVGRLGSQARKS*SKEATT
Trigger: GGTGGTGGCCTCCTTTGAGCAGCTCTTCCGGGCCTG...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp CCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGCAGCAGGCCCGGAAGAGCTaGTCAAAGGAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: PSVGRLGSAASQRSRGGQQARKS*SKEATT
Trigger: GGTGGTGGCCTCCTTTGAGCAGCTCTTCCGGGCCTG...CTGCCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp AGCCTGAGCCCCAAACCTCCGATCTCACCAGGGCCGGAAGCCAGGCACCTGGGCAACATGATGGGGTACTaGACCGTGGCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSPKPPISPGPEARHLGNMMGY*TVASCS
Trigger: GCTGCAGGATGCCACGGTGCAGTACCCCATCATGTT...GCCCAGGTGCCTGGCTTCCGGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp ACCACCGCAGCCTGCTCTGCACAGACCTGCTGGCCCTCGTGGAAGTTGAACTGGCCGTACAAGCGGCTCTaGGGGTCGGGGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TTAACSAQTCWPSWKLNWPYKRL*GSGKPK
Trigger: CTTTGGCTTCCCCGACCCGCAGAGCCGCTTGTACGG...CCAGTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp AGGGGCAGGGAGAACTGTGCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACTCTCTAGGCTGCCCCTaGAGACCCCAGACCAATGAC +
Preference number: 4 (lower is better)
Translates to: RGRENCAHHARTPGGILDSLGCP*RPQTND
Trigger: GTCATTGGTCTGGGGTCTGCAGGGGCAGCCTAGAGA...GTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACAGGCCACCGCCCACTCTGGGTCGTTGGCGCTGTTaGAGTAGTAGAAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: AHHARTPGGILDRPPPTLGRWRC*SSRSRC
Trigger: ACAACGGCTTCTACTACTCCAACAGCGCCAACGACC...CAGAGTGGGCGGTGGCCTGTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTACAGCACGTCCTTCTCTaGGGCCCCGTTCTCCGACAG +
Preference number: 4 (lower is better)
Translates to: PALAPQWADWGQRLHREVQHVLL*GPVLRQ
Trigger: CTGTCGGAGAACGGGGCCCCAGAGAAGGACGTGCTG...TACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGGTGCCTCAGCCCGATaGCCACCAGCACGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PALAPQWADWGQRLHREVGASAR*PPARPS
Trigger: AGAAGGACGTGCTGGTGGCCATCGGGCTGAGGCACC...TACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CAGGGAGAACTGTGCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACAGGCCTCCAGCCGCAGATCCTaGATCTCCAGCGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: QGELCPPCPDSRRHSRQASSRRS*ISSETS
Trigger: TGACGTCTCGCTGGAGATCCAGGATCTGCGGCTGGA...GGCCTGTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp AGGGGCAGGGAGAACTGTGCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACCCACCTTGGCGATCGTaGCATCATCTTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGRENCAHHARTPGGILDPPWRS*HHLPGR
Trigger: CCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGG...GTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTATCGGACCCCAGGCTCTaGGGGCCCACAGTTAGGATG +
Preference number: 4 (lower is better)
Translates to: PALAPQWADWGQRLHREVSDPRL*GPTVRM
Trigger: CATCCTAACTGTGGGCCCCCAGAGCCTGGGGTCCGA...TACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp AGCCTGAGCCCCAAACCTCCGATCTCACCAGGGCCGGAAGCCAGGCACCTGGGCCCACAAAACCGCAAATaGCCCAGGGGAGCAAGCATG +
Preference number: 4 (lower is better)
Translates to: SLSPKPPISPGPEARHLGPQNRK*PRGASM
Trigger: CATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGG...GCCCAGGTGCCTGGCTTCCGGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp AAGCCCATGGGCCCTGACAGTCAGCTTGCAGCCTCTACGTGTGTTTGCAGGGGGCGGAAGCCAGGCACCTaGGCAAAGCCAGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: KPMGPDSQLAASTCVCRGRKPGT*AKPGWA
Trigger: CGCCCAACCTGGCTTTGCCCAGGTGCCTGGCTTCCG...CCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp CCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAAAGGGCAGGGAGGTCTaGGGCAGGCGGTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PALAPQWADWGQRLHREVKGREV*GRRFLS
Trigger: GGAGAGAAACCGCCTGCCCCAGACCTCCCTGCCCTT...TACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GACCAGCCTGGATGGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAAATGGCCGACAGGCCCGGGCTTTaGGCTCTAGGGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: DQPGWRGTLQKPTKPQMADRPGL*ALGARF
Trigger: AAACCTGGCCCCTAGAGCCCAAAGCCCGGGCCTGTC...GGCCATTTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp CACCGTACAAGCGGCTCTGCGGGTCGGGGAAGCCAAAGCTTCGGACCCCAGGCTTTGCCGCCTCTCTCCTaGGACTCAGCTGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: HRTSGSAGRGSQSFGPQALPPLS*DSAGSQ
Trigger: CTGTGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAA...AGCCTGGGGTCCGAAGCTTTGGCTTCCCCGACCCGCAGAGCCGCTTGTACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp TCCTTCCCTCAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCACAGCTTCCACCATTTaGCACGCACACGCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: SFPQLSPGSLELASSPSPTASTI*HAHAAG
Trigger: CCCCGCGGCGTGTGCGTGTCAAATGGTGGAAGCTGT...GGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTGAGGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp TCCTTCCCTCAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCCCTCCAGCCCGTCAATaGCCTCACAGCGGTAACGCC +
Preference number: 4 (lower is better)
Translates to: SFPQLSPGSLELASSPSPPPARQ*PHSGNA
Trigger: GGCGTTACCGCTGTGAGGTCATTGACGGGCTGGAGG...GGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTGAGGGAAGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCATCATGCTCTTTGTCCTaGCGCAGGTGCACGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GSLELASSPSPSVGRLGSSCSLS*RRCTRP
Trigger: AGGCCGCGTGCACCTGCGGCAGGACAAAGAGCATGA...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp CAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCCTGGCAGGCCTCCCTTaGCTCTGTCAGCGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QLSPGSLELASSPSPSVGLAGLP*LCQRQL
Trigger: AAGCTGACGCTGACAGAGGCAAGGGAGGCCTGCCAG...GCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp CCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTACCCCCAGTGAGGCTGTaGCATCTTCTCCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: PALAPQWADWGQRLHREVPPVRL*HLLQTG
Trigger: GCCTGTCTGGAGAAGATGGCACAGCCTCACTGGGGG...TACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp TGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCAGTAAACACCGTACCGTTGCCTAGGTTCTaGTCGTTGGCGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CGRGGPQVLVLAVAVNTVPLPRF*SLALLE
Trigger: CTCCAACAGCGCCAACGACCAGAACCTAGGCAACGG...TACGGTGTTTACTGCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp AGCCCATGGGCCCTGACAGTCAGCTTGCAGCCTCTACGTGTGTTTGCAGGGGGAGGTGCCTCAGCCCGATaGCCACCAGCACGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPWALTVSLQPLRVFAGGGASAR*PPARPS
Trigger: AGAAGGACGTGCTGGTGGCCATCGGGCTGAGGCACC...TCCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp CAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCCAGCGGTCCAGGCCATaGAACTTCCAGGCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: QLSPGSLELASSPSPSVGQRSRP*NFQAAK
Trigger: CTTTGCCGCCTGGAAGTTCCATGGCCTGGACCGCTG...GCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp AGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGCAGCGGTCCAGGCCATaGAACTTCCAGGCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SPSVGRLGSAASQRSRGGQRSRP*NFQAAK
Trigger: CTTTGCCGCCTGGAAGTTCCATGGCCTGGACCGCTG...CCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp AGCCCATGGGCCCTGACAGTCAGCTTGCAGCCTCTACGTGTGTTTGCAGGGGGATCGGACCCCAGGCTCTaGGGGCCCACAGTTAGGATG +
Preference number: 4 (lower is better)
Translates to: SPWALTVSLQPLRVFAGGSDPRL*GPTVRM
Trigger: CATCCTAACTGTGGGCCCCCAGAGCCTGGGGTCCGA...TCCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp AGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGTGGGCAAAGCCAGGTTaGGCGGCAGAGAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: SPSVGRLGSAASQRSRGGWAKPG*AAEKPM
Trigger: CATGGGCTTCTCTGCCGCCCAACCTGGCTTTGCCCA...CCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp TTTGGAATCTCCTCCGTGTGGCCAAGGACCCAGGAACAGCCTGAGCCCCAAACCTCTAGGGGCCAGGTTTaGCTCCCAGCTCCCCACTCG +
Preference number: 4 (lower is better)
Translates to: FGISSVWPRTQEQPEPQTSRGQV*LPAPHS
Trigger: CGAGTGGGGAGCTGGGAGTCAAACCTGGCCCCTAGA...GGTTTGGGGCTCAGGCTGTTCCTGGGTCCTTGGCCACACGGAGGAGATTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp AAAGACCACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCATCGCCAGACCCCCAGTaGGGCTGTGCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KDHTSCPLPPLSWDSAGSSPDPQ*GCAIFS
Trigger: GGAGAAGATGGCACAGCCTCACTGGGGGTCTGGCGA...TGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTGGTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp CCTAATCCGCAAGGCTGTCGCCAGACCCCCAGTGAGGCTGTGCCATCTTCTCCATCATGCTCTTTGTCCTaGCGCAGGTGCACGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PNPQGCRQTPSEAVPSSPSCSLS*RRCTRP
Trigger: AGGCCGCGTGCACCTGCGGCAGGACAAAGAGCATGA...TGGAGAAGATGGCACAGCCTCACTGGGGGTCTGGCGACAGCCTTGCGGATTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp AGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGTCCAGCGAGACGTCATaGTCTTTGTCCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SPSVGRLGSAASQRSRGGSSETS*SLSCRR
Trigger: CCTGCGGCAGGACAAAGAGCATGACGTCTCGCTGGA...CCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp TCCTTCCCTCAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCCCTGTTTCTCTAGGCTaGCCCTGCAGACCCCAGACC +
Preference number: 4 (lower is better)
Translates to: SFPQLSPGSLELASSPSPPVSLG*PCRPQT
Trigger: GGTCTGGGGTCTGCAGGGGCAGCCTAGAGAAACAGG...GGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTGAGGGAAGGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCACCACCTTGGCGATCGTaGCATCATCTTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSLELASSPSPSVGRLGSPPWRS*HHLPGR
Trigger: CCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGG...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp AGGGGCAGGGAGAACTGTGCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACAGAGCTGTCCCACCTTaGCGATCGTGGCATCATCTT +
Preference number: 4 (lower is better)
Translates to: RGRENCAHHARTPGGILDRAVPP*RSWHHL
Trigger: AAGATGATGCCACGATCGCCAAGGTGGGACAGCTCT...GTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCACAGCAGTTGAAGCCCCGGGAATaGGGTGAGGGCTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: HTSCPLPPLSWDSAGSQQLKPRE*GEGSLF
Trigger: AAACAGGGAGCCCTCACCCCATTCCCGGGGCTTCAA...CTGCTGTGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp CAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCCCGTGGGGAGAGGGTTaGGGAAGGGCCTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: QLSPGSLELASSPSPSVGPWGEG*GRAFHK
Trigger: TTTATGGAAGGCCCTTCCCCAACCCTCTCCCCACGG...GCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp AAAGACCACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCAGACCCAGGAACAGCCTaGGCCCCAAACCTCCGATCT +
Preference number: 4 (lower is better)
Translates to: KDHTSCPLPPLSWDSAGSDPGTA*APNLRS
Trigger: AGATCGGAGGTTTGGGGCTCAGGCTGTTCCTGGGTC...TGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTGGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp AAGCCCATGGGCCCTGACAGTCAGCTTGCAGCCTCTACGTGTGTTTGCAGGGGGTCCAGCGAGACGTCATaGTCTTTGTCCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KPMGPDSQLAASTCVCRGSSETS*SLSCRR
Trigger: CCTGCGGCAGGACAAAGAGCATGACGTCTCGCTGGA...CCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp TCCAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGACACCGCAGCCTGCTCTaGACAGACCTGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SRSPQNRKWPRGASMIPGHRSLL*TDLLAL
Trigger: GAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTG...TCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp TCCAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGAGAACTGTGCCCACCATaGCCGGACTCCCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: SRSPQNRKWPRGASMIPGELCPP*PDSRRH
Trigger: ATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTC...TCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp TGGCCAAGGACCCAGGAACAGCCTGAGCCCCAAACCTCCGATCTCACCAGGGCCTTCAAGAATGAGGAATaGGGCCCCTCTGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: WPRTQEQPEPQTSDLTRAFKNEE*GPSEPP
Trigger: TGGTGGCTCAGAGGGGCCGCATTCCTCATTCTTGAA...GGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCTGTTCCTGGGTCCTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp CGCCCACTCTGGGCACCAACCTCCTTAAGGGAGGGAGACCAGCCTGGATGGCGGCTAGGTTCTGGTCGTTaGCGCTGTTGGAGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: RPLWAPTSLREGDQPGWRLGSGR*RCWSSR
Trigger: TCTACTACTCCAACAGCGCCAACGACCAGAACCTAG...CCGCCATCCAGGCTGGTCTCCCTCCCTTAAGGAGGTTGGTGCCCAGAGTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp AGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGTCTGCACAGACCTGCTaGCCCTCGTGGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SPSVGRLGSAASQRSRGGSAQTC*PSWKLN
Trigger: GTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGA...CCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAAGCAAGCATGATTCCTaGAGTGGGGCATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GSLELASSPSPSVGRLGSSKHDS*SGASRS
Trigger: GCTCCTGGATGCCCCACTCCAGGAATCATGCTTGCT...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp GACCAGCCTGGATGGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAAATGGCCCCACAAAACCGCAAATaGCCCAGGGGAGCAAGCATG +
Preference number: 4 (lower is better)
Translates to: DQPGWRGTLQKPTKPQMAPQNRK*PRGASM
Trigger: CATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGG...GGCCATTTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp GGCCCCTCTGAGCCACCATGTAAGCCATGTGGACACTGGTGGCAAAGACAGAGAGGCCACCGCCCACTCTaGGCACCAACCTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: GPSEPPCKPCGHWWQRQRGHRPL*APTSLR
Trigger: CCTTAAGGAGGTTGGTGCCCAGAGTGGGCGGTGGCC...TCTCTGTCTTTGCCACCAGTGTCCACATGGCTTACATGGTGGCTCAGAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCACCCTCAGCTTTCGCCTaGAAGCCTAGAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GSLELASSPSPSVGRLGSPSAFA*KPRTGF
Trigger: GAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTGAGGG...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTACCCTCAGCTTTCGCCTaGAAGCCTAGAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PALAPQWADWGQRLHREVPSAFA*KPRTGF
Trigger: GAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTGAGGG...TACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CACCGTACAAGCGGCTCTGCGGGTCGGGGAAGCCAAAGCTTCGGACCCCAGGCTAAGCCATGTGGACACTaGTGGCAAAGACAGAGAACG +
Preference number: 4 (lower is better)
Translates to: HRTSGSAGRGSQSFGPQAKPCGH*WQRQRT
Trigger: CGTTCTCTGTCTTTGCCACCAGTGTCCACATGGCTT...AGCCTGGGGTCCGAAGCTTTGGCTTCCCCGACCCGCAGAGCCGCTTGTACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp ACCACCGCAGCCTGCTCTGCACAGACCTGCTGGCCCTCGTGGAAGTTGAACTGGCTGGGAAGGACACTTTaGAATCTCCTCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TTAACSAQTCWPSWKLNWLGRTL*NLLRVA
Trigger: GGCCACACGGAGGAGATTCCAAAGTGTCCTTCCCAG...CCAGTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp TGGCCAAGGACCCAGGAACAGCCTGAGCCCCAAACCTCCGATCTCACCAGGGCCCTCCTGGGACTCAGCTaGTTCACAGCAGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: WPRTQEQPEPQTSDLTRALLGLS*FTAVLR
Trigger: TCTGAGTACTGCTGTGAACCAGCTGAGTCCCAGGAG...GGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCTGTTCCTGGGTCCTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
3UTR CAA 72 bp GGGCGGCAGAGAAGCCCATGGGCCCTGACAGTCAGCTaGCAGCCTCTACGTGTGTTTGCAGGGGGACTATTT +
Preference number: 4 (lower is better)
Translates to: GRQRSPWALTVS*QPLRVFAGGLF
Trigger: AAATAGTCCCCCTGCAAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCTTCTCTGCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp TCCAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGATGGCCCCTTGGTAGGTaGACAGGGTCTCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SRSPQNRKWPRGASMIPGWPLGR*TGSPRV
Trigger: CACCCGAGGAGACCCTGTTCACCTACCAAGGGGCCA...TCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp AAAGACCACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCACATGTGGGAGAGATGTaGGGACACACAGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: KDHTSCPLPPLSWDSAGSHVGEM*GHTAPS
Trigger: GGATGGGGCTGTGTGTCCTCACATCTCTCCCACATG...TGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTGGTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCTCCCCAAAGGAGCGGTaGCTCAGCCCGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPSPKER*LSPMAT
Trigger: GGTGGCCATCGGGCTGAGGCACCGCTCCTTTGGGGA...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp GTACACACACCTGAGGGCCCCTCCCCACACAGGGAAACAGGAGAAACAAATGACCCGTACAAGCGGCTCTaGGGGTCGGGGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VHTPEGPSPHRETGETNDPYKRL*GSGKPK
Trigger: CTTTGGCTTCCCCGACCCGCAGAGCCGCTTGTACGG...GTCATTTGTTTCTCCTGTTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGAGTGGCCACCGCCCACTCTaGGCACCAACCTCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: QKPTKPQMAQGSKHDSWSGHRPL*APTSLR
Trigger: CCTTAAGGAGGTTGGTGCCCAGAGTGGGCGGTGGCC...ACTCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp ACCACCGCAGCCTGCTCTGCACAGACCTGCTGGCCCTCGTGGAAGTTGAACTGGGTGACCCTAGGGGTCTaGGAAGGACACTTTGGAATC +
Preference number: 4 (lower is better)
Translates to: TTAACSAQTCWPSWKLNWVTLGV*EGHFGI
Trigger: GATTCCAAAGTGTCCTTCCCAGACCCCTAGGGTCAC...CCAGTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp ACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCACACAGGGAAAGCTGCCGGGGCAACATaGTGGGGTACTGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: TIYCPKYTHLRAPPHTGKAAGAT*WGTAPW
Trigger: CCACGGTGCAGTACCCCATCATGTTGCCCCGGCAGC...TTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp AGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGCAGGGGCACCGCAGCCTGCTCTaGACAGACCTGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RENEPLNKYTASEGMRQGHRSLL*TDLLAL
Trigger: GAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTG...CCCCTGCCGCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp AGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGCAGGGGGAACTGTGCCCACCATaGCCGGACTCCCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RENEPLNKYTASEGMRQGELCPP*PDSRRH
Trigger: ATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTC...CCCCTGCCGCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp AGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGTCTCCCCAACTCCACTaGCACCCCAACTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: SPSVGRLGSAASQRSRGGSPQLH*HPNFKN
Trigger: ATTCTTGAAGTTGGGGTGGCAGTGGAGTTGGGGAGA...CCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCAGCACGTCCTTCTCTaGGGCCCCGTTCTCCGACAG +
Preference number: 4 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPQHVLL*GPVLRQ
Trigger: CTGTCGGAGAACGGGGCCCCAGAGAAGGACGTGCTG...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCTGCCTCCCTAACATGTaGGAGAGATGTGAGGACACA +
Preference number: 4 (lower is better)
Translates to: QLSPGSLELASSPSPSVGCLPNM*ERCEDT
Trigger: TGTGTCCTCACATCTCTCCCACATGTTAGGGAGGCA...GCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp CACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCACAGCAGCCATGTGGACACTGGTaGCAAAGACAGAGAACGCAT +
Preference number: 4 (lower is better)
Translates to: HTSCPLPPLSWDSAGSQQPCGHW*QRQRTH
Trigger: ATGCGTTCTCTGTCTTTGCCACCAGTGTCCACATGG...CTGCTGTGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GGCCCCTCTGAGCCACCATGTAAGCCATGTGGACACTGGTGGCAAAGACAGAGAGGAATCTCCTCCGTGTaGCCAAGGACCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: GPSEPPCKPCGHWWQRQRGISSV*PRTQEQ
Trigger: CTGTTCCTGGGTCCTTGGCCACACGGAGGAGATTCC...TCTCTGTCTTTGCCACCAGTGTCCACATGGCTTACATGGTGGCTCAGAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GGCAGTAGCGAAGCAGAATACATCATAGCGGTGCAGGCGGCGGTGGCGGGGGCCGGAACTTTCCACGTGTaGCAGATGATTTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSSEAEYIIAVQAAVAGAGTFHV*QMIFRR
Trigger: TCTCCTGAAAATCATCTGCCACACGTGGAAAGTTCC...GGCCCCCGCCACCGCCGCCTGCACCGCTATGATGTATTCTGCTTCGCTACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp AGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGCAGGGGTGGCCCCTTGGTAGGTaGACAGGGTCTCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: RENEPLNKYTASEGMRQGWPLGR*TGSPRV
Trigger: CACCCGAGGAGACCCTGTTCACCTACCAAGGGGCCA...CCCCTGCCGCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp AGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGCAGGGGCAGGCCCGGAAGAGCTaGTCAAAGGAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: RENEPLNKYTASEGMRQGQARKS*SKEATT
Trigger: GGTGGTGGCCTCCTTTGAGCAGCTCTTCCGGGCCTG...CCCCTGCCGCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCACACCTCCTGTCCGTTaGCGCCTCTCTCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPTPPVR*RLSPGT
Trigger: AGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGT...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp TCCTTCCCTCAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCCTAGGTTCTGGTCGTTaGCGCTGTTGGAGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: SFPQLSPGSLELASSPSPLGSGR*RCWSSR
Trigger: TCTACTACTCCAACAGCGCCAACGACCAGAACCTAG...GGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTGAGGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCCTCAGTGGGCAGACTaGGGTCAGCGGCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPPQWAD*GQRLHR
Trigger: TCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGG...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp GGCCCCTCTGAGCCACCATGTAAGCCATGTGGACACTGGTGGCAAAGACAGAGATCCCCACTCGTTAGCTaGGACCCGATCGTCTACGTT +
Preference number: 4 (lower is better)
Translates to: GPSEPPCKPCGHWWQRQRSPLVS*DPIVYV
Trigger: AACGTAGACGATCGGGTCCCAGCTAACGAGTGGGGA...TCTCTGTCTTTGCCACCAGTGTCCACATGGCTTACATGGTGGCTCAGAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp GGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGCTTCTTCCCCCAGGCTaGGGGGCAGGGAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: GSNPQGKTNHSINTQPVRLLPPG*GAGRTV
Trigger: CACAGTTCTCCCTGCCCCTCAGCCTGGGGGAAGAAG...CCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCAGACCCCAGACCAATaGCTCTTGCAGGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPQTPDQ*LLQVLP
Trigger: GGGGAGAACCTGCAAGAGTCATTGGTCTGGGGTCTG...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp AAAGAGCTGTCCCACCTTGGCGATCGTGGCATCATCTTCCTGGCAGGCCTCCCTTCCACGTGTGGCAGATaGTTTTCAGGAGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KELSHLGDRGIIFLAGLPSTCGR*FSGEGE
Trigger: CTCTCCTTCTCCTGAAAATCATCTGCCACACGTGGA...AGGGAGGCCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGGGACAGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCTGCTCTGCACAGACCTaGTGGCCCTCGTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPCSAQT*WPSWKL
Trigger: CAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCA...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp AGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGCAGGGGCTGGCAGGCCTCCCTTaGCTCTGTCAGCGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RENEPLNKYTASEGMRQGLAGLP*LCQRQL
Trigger: AAGCTGACGCTGACAGAGGCAAGGGAGGCCTGCCAG...CCCCTGCCGCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCCCGTTGCCTAGGTTCTaGTCGTTGGCGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPPLPRF*SLALLE
Trigger: CTCCAACAGCGCCAACGACCAGAACCTAGGCAACGG...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp TCCAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGAACTGGTAGCGCCCGTTaGGGGACTGGTAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SRSPQNRKWPRGASMIPGTGSAR*GTGKER
Trigger: TCTTTCCTTACCAGTCCCCCAACGGGCGCTACCAGT...TCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp AGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGCAGGGGCAGCGGTCCAGGCCATaGAACTTCCAGGCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RENEPLNKYTASEGMRQGQRSRP*NFQAAK
Trigger: CTTTGCCGCCTGGAAGTTCCATGGCCTGGACCGCTG...CCCCTGCCGCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp CCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGGACTATTTCATGCCTaGTTCCACCCCAAATTCCTA +
Preference number: 4 (lower is better)
Translates to: PALAPQWADWGQRLHREVGLFHA*FHPKFL
Trigger: TAGGAATTTGGGGTGGAACCAGGCATGAAATAGTCC...TACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp ACCACCGCAGCCTGCTCTGCACAGACCTGCTGGCCCTCGTGGAAGTTGAACTGGAAGGAGGAAAGATTGTaGTACCCCATTTTACACCTG +
Preference number: 4 (lower is better)
Translates to: TTAACSAQTCWPSWKLNWKEERL*YPILHL
Trigger: CAGGTGTAAAATGGGGTATCACAATCTTTCCTCCTT...CCAGTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCAGGCTGCGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp CAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGAGTCTTTGCCATGACCGTTaGCTAGGTTCTGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: QKPTKPQMAQGSKHDSWSLCHDR*LGSGRW
Trigger: CCAACGACCAGAACCTAGGCAACGGTCATGGCAAAG...ACTCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCGGGCCACCGCAGGGCTaGCGGGGCAACATGATGGGG +
Preference number: 4 (lower is better)
Translates to: LKWLQPTRENEPLNKYTAGPPQG*RGNMMG
Trigger: CCCCATCATGTTGCCCCGGCAGCCCTGCGGTGGCCC...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCTTCGCACGCCAGGTaGCAGGCCCGGGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTASHAR*QARATA
Trigger: TGCGGTGGCCCGGGCCTGGCACCTGGCGTGCGAAGC...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp AACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGCGGACGCTACCATCTaGCAGCCAGCCAGCGTCGCA +
Preference number: 4 (lower is better)
Translates to: NPQGKTNHSINTQPVRECADATI*QPASVA
Trigger: TGCGACGCTGGCTGGCTGGCAGATGGTAGCGTCCGC...GCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp GTACACACACCTGAGGGCCCCTCCCCACACAGGGAAACAGGAGAAACAAATGACGGTCGTTGGCGCTGTTaGAGTAGTAGAAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: VHTPEGPSPHRETGETNDGRWRC*SSRSRC
Trigger: ACAACGGCTTCTACTACTCCAACAGCGCCAACGACC...GTCATTTGTTTCTCCTGTTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp GGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGTCCAGCGAGACGTCATaGTCTTTGTCCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSNPQGKTNHSINTQPVRSSETS*SLSCRR
Trigger: CCTGCGGCAGGACAAAGAGCATGACGTCTCGCTGGA...CCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGGGCCACCGCAGGGCTaGCGGGGCAACATGATGGGG +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTGPPQG*RGNMMG
Trigger: CCCCATCATGTTGCCCCGGCAGCCCTGCGGTGGCCC...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp CAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGAGTGCCTCTACGTGTGTTTaGAGGGGGACTATTTCATGC +
Preference number: 4 (lower is better)
Translates to: QKPTKPQMAQGSKHDSWSASTCV*RGTISC
Trigger: GCATGAAATAGTCCCCCTGCAAACACACGTAGAGGC...ACTCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp AACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGTGCCTCAGCCCGATaGCCACCAGCACGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NPQGKTNHSINTQPVRECGASAR*PPARPS
Trigger: AGAAGGACGTGCTGGTGGCCATCGGGCTGAGGCACC...GCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp GGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGTCCAGCCGCAGATCCTaGATCTCCAGCGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: GSNPQGKTNHSINTQPVRSSRRS*ISSETS
Trigger: TGACGTCTCGCTGGAGATCCAGGATCTGCGGCTGGA...CCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR TCA 90 bp GGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGAGGAGGTCTTTGCCATaGCCGTTGCCTAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSNPQGKTNHSINTQPVRRRSLP*PLPRFW
Trigger: CCAGAACCTAGGCAACGGTCATGGCAAAGACCTCCT...CCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR TCA 90 bp CAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGAGTTCTCTACCAAGTCAATaGAACCTTAGGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QKPTKPQMAQGSKHDSWSSLPSQ*NLREWR
Trigger: CCTCCACTCCCTAAGGTTTCATTGACTTGGTAGAGA...ACTCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp GACCAGCCTGGATGGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAAATGGCCTCGTCTACGTTATTATaGATGTGGAAATTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: DQPGWRGTLQKPTKPQMASSTLL*MWKFPR
Trigger: CCTAGGAAATTTCCACATTCATAATAACGTAGACGA...GGCCATTTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp GGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGAACATGATGGGGTACTaGACCGTGGCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSNPQGKTNHSINTQPVRNMMGY*TVASCS
Trigger: GCTGCAGGATGCCACGGTGCAGTACCCCATCATGTT...CCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp CAGCTTTCGCCTGGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAATTTCCTAGGAAAATaGAAGGAACTTTCCACGTGT +
Preference number: 4 (lower is better)
Translates to: QLSPGSLELASSPSPSVGNFLGK*KELSTC
Trigger: ACACGTGGAAAGTTCCTTGCATTTTCCTAGGAAATT...GCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCCAGGCGAAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGCTCGGTATTGGAGCTaGACACACTGCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSNPQGKTNHSINTQPVRARYWS*THCILL
Trigger: CAGCAGGATGCAGTGTGTCCAGCTCCAATACCGAGC...CCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR TCA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCGGCCCTCGTGGAAGTTaGACTGGTAGCGCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LKWLQPTRENEPLNKYTAGPRGS*TGSARW
Trigger: CCAACGGGCGCTACCAGTTCAACTTCCACGAGGGCC...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR TCA 90 bp GACACTGGTGGCAAAGACAGAGAACGCATTTTAAGGACATACATCTTATCCTCAGAAGCCCATGGGCCCTaGCAGTCAGCTTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DTGGKDRERILRTYILSSEAHGP*QSACSL
Trigger: GAGGCTGCAAGCTGACTGTCAGGGCCCATGGGCTTC...TGAGGATAAGATGTATGTCCTTAAAATGCGTTCTCTGTCTTTGCCACCAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR TCA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCAGAGGCCACAGGCCCTaGAAAGATATGTTCGTGTTT +
Preference number: 4 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPRGHRP*KDMFVF
Trigger: AAACACGAACATATCTTTTCAGGGCCTGTGGCCTCT...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR GCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACATGCACCGTGGCATCCTaGAGCCAGCCCGCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTCTVAS*SQPALH
Trigger: GTGCAACGCGGGCTGGCTGCAGGATGCCACGGTGCA...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCCCGTACAAGCGGCTCTaGGGGTCGGGGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKWLQPTRENEPLNKYTAPYKRL*GSGKPK
Trigger: CTTTGGCTTCCCCGACCCGCAGAGCCGCTTGTACGG...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp AGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGCAGGGGCAGACCAATGACTCTTaGAGGTTCTCCCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: RENEPLNKYTASEGMRQGQTNDS*RFSPTP
Trigger: TGGAGTTGGGGAGAACCTGCAAGAGTCATTGGTCTG...CCCCTGCCGCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp GGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGGTCGTTGGCGCTGTTaGAGTAGTAGAAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: GSNPQGKTNHSINTQPVRGRWRC*SSRSRC
Trigger: ACAACGGCTTCTACTACTCCAACAGCGCCAACGACC...CCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCCAGCACGTCCTTCTCTaGGGCCCCGTTCTCCGACAG +
Preference number: 4 (lower is better)
Translates to: LKWLQPTRENEPLNKYTAQHVLL*GPVLRQ
Trigger: CTGTCGGAGAACGGGGCCCCAGAGAAGGACGTGCTG...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCGGAGACCAGCCTGGATaGCGGGGAACCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LKWLQPTRENEPLNKYTAGDQPG*RGTLQK
Trigger: CTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTCTCC...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp AACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCAGGAGGTCTTTGCCATaGCCGTTGCCTAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: NPQGKTNHSINTQPVRECRRSLP*PLPRFW
Trigger: CCAGAACCTAGGCAACGGTCATGGCAAAGACCTCCT...GCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR TCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAACAGCTTCCACCATTTaGCACGCACACGCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTTASTI*HAHAAG
Trigger: CCCCGCGGCGTGTGCGTGTCAAATGGTGGAAGCTGT...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR TCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGGCCCTCGTGGAAGTTaGACTGGTAGCGCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTGPRGS*TGSARW
Trigger: CCAACGGGCGCTACCAGTTCAACTTCCACGAGGGCC...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR TCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACGCTGCCGGGGCAACATaGTGGGGTACTGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYAAGAT*WGTAPW
Trigger: CCACGGTGCAGTACCCCATCATGTTGCCCCGGCAGC...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACTCCCCAAAGGAGCGGTaGCTCAGCCCGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYSPKER*LSPMAT
Trigger: GGTGGCCATCGGGCTGAGGCACCGCTCCTTTGGGGA...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACGGGCAGGGAGAACTGTaGCCACCATGCCCGGACTCC +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYGQGEL*PPCPDS
Trigger: GGAGTCCGGGCATGGTGGGCACAGTTCTCCCTGCCC...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGGAGACCAGCCTGGATaGCGGGGAACCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTGDQPG*RGTLQK
Trigger: CTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTCTCC...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR TCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACCCTCCAGCCCGTCAATaGCCTCACAGCGGTAACGCC +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYPPARQ*PHSGNA
Trigger: GGCGTTACCGCTGTGAGGTCATTGACGGGCTGGAGG...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACATCATGCTCTTTGTCCTaGCGCAGGTGCACGCGGCCT +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTSCSLS*RRCTRP
Trigger: AGGCCGCGTGCACCTGCGGCAGGACAAAGAGCATGA...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCTCCAGCCGCAGATCCTaGATCTCCAGCGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: LKWLQPTRENEPLNKYTASSRRS*ISSETS
Trigger: TGACGTCTCGCTGGAGATCCAGGATCTGCGGCTGGA...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACTCGGACCCCAGGCTCTaGGGGCCCACAGTTAGGATG +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYSDPRL*GPTVRM
Trigger: CATCCTAACTGTGGGCCCCCAGAGCCTGGGGTCCGA...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACACCTCAGTGGGCAGACTaGGGTCAGCGGCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTPQWAD*GQRLHR
Trigger: TCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGG...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACATGCTCTGCACAGACCTaGTGGCCCTCGTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTCSAQT*WPSWKL
Trigger: CAACTTCCACGAGGGCCAGCAGGTCTGTGCAGAGCA...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCACTGGTAGCGCCCGTTaGGGGACTGGTAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LKWLQPTRENEPLNKYTATGSAR*GTGKER
Trigger: TCTTTCCTTACCAGTCCCCCAACGGGCGCTACCAGT...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACACCACCTTGGCGATCGTaGCATCATCTTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTPPWRS*HHLPGR
Trigger: CCTGCCAGGAAGATGATGCCACGATCGCCAAGGTGG...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR TCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAACCCCATTTTACACCTaGGAGGCCCAGGGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTTPFYT*EAQGSK
Trigger: CTTAGAGCCCTGGGCCTCTCAGGTGTAAAATGGGGT...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACCCGTTGCCTAGGTTCTaGTCGTTGGCGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYPLPRF*SLALLE
Trigger: CTCCAACAGCGCCAACGACCAGAACCTAGGCAACGG...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAACTGGTAGCGCCCGTTaGGGGACTGGTAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTTGSAR*GTGKER
Trigger: TCTTTCCTTACCAGTCCCCCAACGGGCGCTACCAGT...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAACCTGGGCTCGGTATTaGAGCTGGACACACTGCATC +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTTWARY*SWTHCI
Trigger: GATGCAGTGTGTCCAGCTCCAATACCGAGCCCAGGT...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR CCA 90 bp AACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCGGGCAAACTTGGCAGTaGATAGTTCCCCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: NPQGKTNHSINTQPVRECGQTWQ*IVPQIF
Trigger: GAAGATTTGGGGAACTATCCACTGCCAAGTTTGCCC...GCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR CCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCCCAGGGCAAACTTaGCAGTGGATAGTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTAPGQT*QWIVPQ
Trigger: TTGGGGAACTATCCACTGCCAAGTTTGCCCTGGGGC...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR GCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACACTTTGCCATGACCGTTaGCTAGGTTCTGGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTLCHDR*LGSGRW
Trigger: CCAACGACCAGAACCTAGGCAACGGTCATGGCAAAG...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR GCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACAACATGATGGGGTACTaGACCGTGGCATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYNMMGY*TVASCS
Trigger: GCTGCAGGATGCCACGGTGCAGTACCCCATCATGTT...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACTCTGCACAGACCTGCTaGCCCTCGTGGAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYSAQTC*PSWKLN
Trigger: GTTCAACTTCCACGAGGGCCAGCAGGTCTGTGCAGA...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAAGAGCTGTCCCACCTTaGCGATCGTGGCATCATCTT +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTRAVPP*RSWHHL
Trigger: AAGATGATGCCACGATCGCCAAGGTGGGACAGCTCT...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACAGCAAGCATGATTCCTaGAGTGGGGCATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYSKHDS*SGASRS
Trigger: GCTCCTGGATGCCCCACTCCAGGAATCATGCTTGCT...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR GCA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACTGGAGCTGGACACACTaGATCCTGCTGAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYWSWTH*ILLSDF
Trigger: GAAGTCACTCAGCAGGATGCAGTGTGTCCAGCTCCA...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR GCA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAAAGTTCACCTCTCTGTaGCTCCATTTCCTCATCGTC +
Preference number: 4 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTKFTSL*LHFLIV
Trigger: GACGATGAGGAAATGGAGGCACAGAGAGGTGAACTT...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR CAA 90 bp GCCAGTGAGGGAATGCGGCAGGGGAGGGCCCCAGGTCCTAGTGCTGGCGGTAGCCCTGGCAGGCCTCCCTaGCCTCTGTCAGCGTCAGCT +
Preference number: 5 (lower is better)
Translates to: ASEGMRQGRAPGPSAGGSPGRPP*PLSASA
Trigger: AGCTGACGCTGACAGAGGCAAGGGAGGCCTGCCAGG...GCTACCGCCAGCACTAGGACCTGGGGCCCTCCCCTGCCGCATTCCCTCACTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CAA 90 bp CGCCCACTCTGGGCACCAACCTCCTTAAGGGAGGGAGACCAGCCTGGATGGCGGCCTGGCAGGCCTCCCTaGCCTCTGTCAGCGTCAGCT +
Preference number: 5 (lower is better)
Translates to: RPLWAPTSLREGDQPGWRPGRPP*PLSASA
Trigger: AGCTGACGCTGACAGAGGCAAGGGAGGCCTGCCAGG...CCGCCATCCAGGCTGGTCTCCCTCCCTTAAGGAGGTTGGTGCCCAGAGTGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCACAGGTGCACGCGGCCTaGGTAGTCCCCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: GSLELASSPSPSVGRLGSQVHAA*VVPKGA
Trigger: CGCTCCTTTGGGGACTACCAAGGCCGCGTGCACCTG...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp CAGGGAGAACTGTGCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACAGGCCGAGACGTCATGCTCTTaGTCCTGCCGCAGGTGCACG +
Preference number: 5 (lower is better)
Translates to: QGELCPPCPDSRRHSRQAETSCS*SCRRCT
Trigger: CGTGCACCTGCGGCAGGACAAAGAGCATGACGTCTC...GGCCTGTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp GAACAGCCTGAGCCCCAAACCTCCGATCTCACCAGGGCCGGAAGCCAGGCACCTCTGGGCAAAGCCAGGTaGGGCGGCAGAGAAGCCCAT +
Preference number: 5 (lower is better)
Translates to: EQPEPQTSDLTRAGSQAPLGKAR*GGREAH
Trigger: ATGGGCTTCTCTGCCGCCCAACCTGGCTTTGCCCAG...AGGTGCCTGGCTTCCGGCCCTGGTGAGATCGGAGGTTTGGGGCTCAGGCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS CCA 90 bp AAAGGAGCGGTGCCTCAGCCCGATGGCCACCAGCACGTCCTTCTCTaGGGCCCCGTTCTCCGACAGCTTCCACCATTTGACACGCACACG +
Preference number: 5 (lower is better)
Translates to: KGAVPQPDGHQHVLL*GPVLRQLPPFDTHT
Trigger: CGTGTGCGTGTCAAATGGTGGAAGCTGTCGGAGAACGGGGCCCCAGAGAAGGACGTGCTGGTGGCCATCGGGCTGAGGCACCGCTCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS-3UTR CAA 90 bp CAGGGAGAACTGTGCCCACCATGCCCGGACTCCCGGCGGCATTCTAGACAGGCCGATCACACTGGCCCCTaGGTAGGTGAACAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: QGELCPPCPDSRRHSRQADHTGP*VGEQGL
Trigger: GAGACCCTGTTCACCTACCAAGGGGCCAGTGTGATC...GGCCTGTCTAGAATGCCGCCGGGAGTCCGGGCATGGTGGGCACAGTTCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp AGCCCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGGACAGCTTCCACCATTaGACACGCACACGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: SPSVGRLGSAASQRSRGGDSFHH*TRTRRG
Trigger: CCCGCGGCGTGTGCGTGTCAAATGGTGGAAGCTGTC...CCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS TCA 90 bp CGTAGCGGTAGCGGCAGGGCAGGATCACACTGGCCCCTTGGTAGGTaGACAGGGTCTCCTCGGGTGTCTCCACCACCAGCTTCACTCCAT +
Preference number: 5 (lower is better)
Translates to: RSGSGRAGSHWPLGR*TGSPRVSPPPASLH
Trigger: ATGGAGTGAAGCTGGTGGTGGAGACACCCGAGGAGACCCTGTTCACCTACCAAGGGGCCAGTGTGATCCTGCCCTGCCGCTACCGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS-3UTR CAA 90 bp AAAGACCACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCAAGACAGGCCCGGGCTTaGGGCTCTAGGGGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: KDHTSCPLPPLSWDSAGSRQARA*GSRGQV
Trigger: AACCTGGCCCCTAGAGCCCAAAGCCCGGGCCTGTCT...TGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTGGTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS TCA 90 bp GCAGCTCCAGCTCCACCAGACCGCTTTCATCCTCCAGCCCGTCAATaGCCTCACAGCGGTAACGCCCATAGTCCTCCAGCCGCAGATCCT +
Preference number: 5 (lower is better)
Translates to: AAPAPPDRFHPPARQ*PHSGNAHSPPAADP
Trigger: AGGATCTGCGGCTGGAGGACTATGGGCGTTACCGCTGTGAGGTCATTGACGGGCTGGAGGATGAAAGCGGTCTGGTGGAGCTGGAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS-3UTR CAA 90 bp CCTAATCCGCAAGGCTGTCGCCAGACCCCCAGTGAGGCTGTGCCATCTTCTCCAGATCACACTGGCCCCTaGGTAGGTGAACAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: PNPQGCRQTPSEAVPSSPDHTGP*VGEQGL
Trigger: GAGACCCTGTTCACCTACCAAGGGGCCAGTGTGATC...TGGAGAAGATGGCACAGCCTCACTGGGGGTCTGGCGACAGCCTTGCGGATTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CAA 90 bp GTACACACACCTGAGGGCCCCTCCCCACACAGGGAAACAGGAGAAACAAATGACCAGGTGCACGCGGCCTaGGTAGTCCCCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: VHTPEGPSPHRETGETNDQVHAA*VVPKGA
Trigger: CGCTCCTTTGGGGACTACCAAGGCCGCGTGCACCTG...GTCATTTGTTTCTCCTGTTTCCCTGTGTGGGGAGGGGCCCTCAGGTGTGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp GACCAGCCTGGATGGCGGGGAACCCTCCAGAAGCCCACAAAACCGCAAATGGCCAAGAGCTGTCCCACCTaGGCGATCGTGGCATCATCT +
Preference number: 5 (lower is better)
Translates to: DQPGWRGTLQKPTKPQMAKSCPT*AIVASS
Trigger: AGATGATGCCACGATCGCCAAGGTGGGACAGCTCTT...GGCCATTTGCGGTTTTGTGGGCTTCTGGAGGGTTCCCCGCCATCCAGGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp GGAAGCCTAGAACTGGCTTCCAGCCCTAGCCCCTCAGTGGGCAGACTGGGGTCAAAGAGCTGTCCCACCTaGGCGATCGTGGCATCATCT +
Preference number: 5 (lower is better)
Translates to: GSLELASSPSPSVGRLGSKSCPT*AIVASS
Trigger: AGATGATGCCACGATCGCCAAGGTGGGACAGCTCTT...TGACCCCAGTCTGCCCACTGAGGGGCTAGGGCTGGAAGCCAGTTCTAGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS CCA 90 bp CTGGAGTCCTGTCTGGGCACTCAGACCTGGGCTCGGTATTGGAGCTaGACACACTGCATCCTGCTGAGTGACTTCGGGCAAGTTCACCTC +
Preference number: 5 (lower is better)
Translates to: LESCLGTQTWARYWS*THCILLSDFGQVHL
Trigger: GAGGTGAACTTGCCCGAAGTCACTCAGCAGGATGCAGTGTGTCCAGCTCCAATACCGAGCCCAGGTCTGAGTGCCCAGACAGGACTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS CCA 90 bp GGTCTTTGCCATGACCGTTGCCTAGGTTCTGGTCGTTGGCGCTGTTaGAGTAGTAGAAGCCGTTGTAGAAGGGCAGTCCGTAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GLCHDRCLGSGRWRC*SSRSRCRRAVRRSR
Trigger: CCGGCTCCTACGGACTGCCCTTCTACAACGGCTTCTACTACTCCAACAGCGCCAACGACCAGAACCTAGGCAACGGTCATGGCAAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS-3UTR CAA 90 bp CACACCTCCTGTCCGTTGCCGCCTCTCTCCTGGGACTCAGCTGGTTCACAGCAGAGCCTCTACGTGTGTTaGCAGGGGGACTATTTCATG +
Preference number: 5 (lower is better)
Translates to: HTSCPLPPLSWDSAGSQQSLYVC*QGDYFM
Trigger: CATGAAATAGTCCCCCTGCAAACACACGTAGAGGCT...CTGCTGTGAACCAGCTGAGTCCCAGGAGAGAGGCGGCAACGGACAGGAGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CAA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCGAGACGTCATGCTCTTaGTCCTGCCGCAGGTGCACG +
Preference number: 5 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPETSCS*SCRRCT
Trigger: CGTGCACCTGCGGCAGGACAAAGAGCATGACGTCTC...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp CCCTCAGTGGGCAGACTGGGGTCAGCGGCTTCACAGAGAAGTAGAGGTGGGCAGAACAAAACAGATTCTTaGGAACCGAGAGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PSVGRLGSAASQRSRGGQNKTDS*EPRGEG
Trigger: CCCTTCCCCTCTCGGTTCCAAAGAATCTGTTTTGTT...CTGCCCACCTCTACTTCTCTGTGAAGCCGCTGACCCCAGTCTGCCCACTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp GGCCCCTCTGAGCCACCATGTAAGCCATGTGGACACTGGTGGCAAAGACAGAGATCTGGGAAGGACACTTaGGAATCTCCTCCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: GPSEPPCKPCGHWWQRQRSGKDT*ESPPCG
Trigger: GCCACACGGAGGAGATTCCAAAGTGTCCTTCCCAGA...TCTCTGTCTTTGCCACCAGTGTCCACATGGCTTACATGGTGGCTCAGAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS CCA 90 bp GATAGTTCCCCAAATCTTCTGGAGTCCTGTCTGGGCACTCAGACCTaGGCTCGGTATTGGAGCTGGACACACTGCATCCTGCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: DSSPNLLESCLGTQT*ARYWSWTHCILLSD
Trigger: GTCACTCAGCAGGATGCAGTGTGTCCAGCTCCAATACCGAGCCCAGGTCTGAGTGCCCAGACAGGACTCCAGAAGATTTGGGGAACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR CAA 90 bp AACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGAATGCCCTGGCAGGCCTCCCTaGCCTCTGTCAGCGTCAGCT +
Preference number: 5 (lower is better)
Translates to: NPQGKTNHSINTQPVRECPGRPP*PLSASA
Trigger: AGCTGACGCTGACAGAGGCAAGGGAGGCCTGCCAGG...GCATTCCCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CAA 90 bp GGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAGTGAGGGGCCCCAGGGCAAACTaGGCAGTGGATAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GSNPQGKTNHSINTQPVRGPRAN*AVDSSP
Trigger: TGGGGAACTATCCACTGCCAAGTTTGCCCTGGGGCC...CCTCACTGGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR CAA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCCAGGTGCACGCGGCCTaGGTAGTCCCCAAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: LKWLQPTRENEPLNKYTAQVHAA*VVPKGA
Trigger: CGCTCCTTTGGGGACTACCAAGGCCGCGTGCACCTG...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CAA 90 bp TCCAGAAGCCCACAAAACCGCAAATGGCCCAGGGGAGCAAGCATGATTCCTGGAAACAAAACAGATTCTTaGGAACCGAGAGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SRSPQNRKWPRGASMIPGNKTDS*EPRGEG
Trigger: CCCTTCCCCTCTCGGTTCCAAAGAATCTGTTTTGTT...TCCAGGAATCATGCTTGCTCCCCTGGGCCATTTGCGGTTTTGTGGGCTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359595.8
ENST00000558770.5
CDS-3UTR CAA 90 bp AGATGTAGTCTCTACCAAGTCAATGAAACCTTAGGGAGTGGAGGTGACCCTAGGGCCCTGACAGTCAGCTaGCAGCCTCTACGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: RCSLYQVNETLGSGGDPRALTVS*QPLRVF
Trigger: AAACACACGTAGAGGCTGCAAGCTGACTGTCAGGGC...CCTAGGGTCACCTCCACTCCCTAAGGTTTCATTGACTTGGTAGAGACTACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CAA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGACAGCTTCCACCATTaGACACGCACACGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTDSFHH*TRTRRG
Trigger: CCCGCGGCGTGTGCGTGTCAAATGGTGGAAGCTGTC...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CAA 90 bp GGCAGTCATAGCACCATTTATTGTCCAAAGTACACACACCTGAGGGCCCCTCCCTACATCTTATCCTCATaGCCTCTGAGGGAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: GSHSTIYCPKYTHLRAPPYILSS*PLREVK
Trigger: CTTTACCTCCCTCAGAGGCAATGAGGATAAGATGTA...GGGAGGGGCCCTCAGGTGTGTGTACTTTGGACAATAAATGGTGCTATGACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS-3UTR CAA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGAGACGTCATGCTCTTaGTCCTGCCGCAGGTGCACG +
Preference number: 5 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTETSCS*SCRRCT
Trigger: CGTGCACCTGCGGCAGGACAAAGAGCATGACGTCTC...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CAA 90 bp TTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGCCAAGAGCTGTCCCACCTaGGCGATCGTGGCATCATCT +
Preference number: 5 (lower is better)
Translates to: LKWLQPTRENEPLNKYTAKSCPT*AIVASS
Trigger: AGATGATGCCACGATCGCCAAGGTGGGACAGCTCTT...GGCTGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CAA 90 bp CAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACACAGACCTGGGCTCGGTATaGGAGCTGGACACACTGCAT +
Preference number: 5 (lower is better)
Translates to: QLKWLQPTRENEPLNKYTDLGSV*ELDTLH
Trigger: ATGCAGTGTGTCCAGCTCCAATACCGAGCCCAGGTC...TGTGTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS-3UTR CAA 90 bp AAACAGTTAAAATGGCTCCAACCCACAAGGGAAAACGAACCACTCAATAAATACGATCACACTGGCCCCTaGGTAGGTGAACAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: KQLKWLQPTRENEPLNKYDHTGP*VGEQGL
Trigger: GAGACCCTGTTCACCTACCAAGGGGCCAGTGTGATC...GTATTTATTGAGTGGTTCGTTTTCCCTTGTGGGTTGGAGCCATTTTAACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562889.5
CDS-3UTR CAA 90 bp GACACTGGTGGCAAAGACAGAGAACGCATTTTAAGGACATACATCTTATCCTCAAGGCGGTTTCTCTCCTaGTGGTCAGGGTCTGATAGA +
Preference number: 5 (lower is better)
Translates to: DTGGKDRERILRTYILSSRRFLS*WSGSDR
Trigger: TCTATCAGACCCTGACCACAAGGAGAGAAACCGCCT...TGAGGATAAGATGTATGTCCTTAAAATGCGTTCTCTGTCTTTGCCACCAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS CAA 90 bp GGCCGGCTCGTAGCGGTAGCGGCAGGGCAGGATCACACTGGCCCCTaGGTAGGTGAACAGGGTCTCCTCGGGTGTCTCCACCACCAGCTT +
Preference number: 6 (lower is better)
Translates to: GRLVAVAAGQDHTGP*VGEQGLLGCLHHQL
Trigger: AAGCTGGTGGTGGAGACACCCGAGGAGACCCTGTTCACCTACCAAGGGGCCAGTGTGATCCTGCCCTGCCGCTACCGCTACGAGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS CAA 90 bp CAGCGAGACGTCATGCTCTTTGTCCTGCCGCAGGTGCACGCGGCCTaGGTAGTCCCCAAAGGAGCGGTGCCTCAGCCCGATGGCCACCAG +
Preference number: 6 (lower is better)
Translates to: QRDVMLFVLPQVHAA*VVPKGAVPQPDGHQ
Trigger: CTGGTGGCCATCGGGCTGAGGCACCGCTCCTTTGGGGACTACCAAGGCCGCGTGCACCTGCGGCAGGACAAAGAGCATGACGTCTCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS TCA 72 bp AGCGGCAGGGCAGGATCACACTGGCCCCTTGGTAGGTaGACAGGGTCTCCTCGGGTGTCTCCACCACCAGCT +
Preference number: 6 (lower is better)
Translates to: SGRAGSHWPLGR*TGSPRVSPPPA
Trigger: AGCTGGTGGTGGAGACACCCGAGGAGACCCTGTTCACCTACCAAGGGGCCAGTGTGATCCTGCCCTGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS GCA 72 bp TCCAGCCGCAGATCCTGGATCTCCAGCGAGACGTCATaGTCTTTGTCCTGCCGCAGGTGCACGCGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: SSRRSWISSETS*SLSCRRCTRPW
Trigger: CCAAGGCCGCGTGCACCTGCGGCAGGACAAAGAGCATGACGTCTCGCTGGAGATCCAGGATCTGCGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS CCA 72 bp GTGCCTCAGCCCGATGGCCACCAGCACGTCCTTCTCTaGGGCCCCGTTCTCCGACAGCTTCCACCATTTGAC +
Preference number: 6 (lower is better)
Translates to: VPQPDGHQHVLL*GPVLRQLPPFD
Trigger: GTCAAATGGTGGAAGCTGTCGGAGAACGGGGCCCCAGAGAAGGACGTGCTGGTGGCCATCGGGCTGAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS CAA 72 bp GTAGCGGTAGCGGCAGGGCAGGATCACACTGGCCCCTaGGTAGGTGAACAGGGTCTCCTCGGGTGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: VAVAAGQDHTGP*VGEQGLLGCLH
Trigger: GTGGAGACACCCGAGGAGACCCTGTTCACCTACCAAGGGGCCAGTGTGATCCTGCCCTGCCGCTACCGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS TCA 72 bp GCTCCACCAGACCGCTTTCATCCTCCAGCCCGTCAATaGCCTCACAGCGGTAACGCCCATAGTCCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: APPDRFHPPARQ*PHSGNAHSPPA
Trigger: GGCTGGAGGACTATGGGCGTTACCGCTGTGAGGTCATTGACGGGCTGGAGGATGAAAGCGGTCTGGTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS CCA 72 bp TGTCTGGGCACTCAGACCTGGGCTCGGTATTGGAGCTaGACACACTGCATCCTGCTGAGTGACTTCGGGCAA +
Preference number: 6 (lower is better)
Translates to: CLGTQTWARYWS*THCILLSDFGQ
Trigger: TTGCCCGAAGTCACTCAGCAGGATGCAGTGTGTCCAGCTCCAATACCGAGCCCAGGTCTGAGTGCCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS CCA 72 bp CATGACCGTTGCCTAGGTTCTGGTCGTTGGCGCTGTTaGAGTAGTAGAAGCCGTTGTAGAAGGGCAGTCCGT +
Preference number: 6 (lower is better)
Translates to: HDRCLGSGRWRC*SSRSRCRRAVR
Trigger: ACGGACTGCCCTTCTACAACGGCTTCTACTACTCCAACAGCGCCAACGACCAGAACCTAGGCAACGGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1
CDS CCA 72 bp CTAAGGGGGATGAGGCATTTACCCACATGTCATAGCTaGGACGGGCTGGGGCTAAAGTCAGGTCACCTTCCT +
Preference number: 6 (lower is better)
Translates to: LRGMRHLPTCHS*DGLGLKSGHLP
Trigger: AGGAAGGTGACCTGACTTTAGCCCCAGCCCGTCCCAGCTATGACATGTGGGTAAATGCCTCATCCCCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS CCA 72 bp CAGTGGATAGTTCCCCAAATCTTCTGGAGTCCTGTCTaGGCACTCAGACCTGGGCTCGGTATTGGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: QWIVPQIFWSPV*ALRPGLGIGAG
Trigger: TCCAGCTCCAATACCGAGCCCAGGTCTGAGTGCCCAGACAGGACTCCAGAAGATTTGGGGAACTATCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562889.5
CDS GCA 72 bp GGGCTAAAGTCAGGTCACCTTCCTCTATCCCCGAACTaGCTCCCTAACATGTGGGAGAGATGTGAGGACACA +
Preference number: 6 (lower is better)
Translates to: GLKSGHLPLSPN*LPNMWERCEDT
Trigger: TGTGTCCTCACATCTCTCCCACATGTTAGGGAGGCAGTTCGGGGATAGAGGAAGGTGACCTGACTTTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558770.5
CDS CCA 72 bp GGTCTTTGCCATGACCGTTGCCTAGGTTCTGGTCGTTaGCGCTGTTGGAGTAGTAGAAGCCGTTGTAGAAGG +
Preference number: 6 (lower is better)
Translates to: GLCHDRCLGSGR*RCWSSRSRCRR
Trigger: CCTTCTACAACGGCTTCTACTACTCCAACAGCGCCAACGACCAGAACCTAGGCAACGGTCATGGCAAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359595.8
ENST00000558770.5
ENST00000562281.1
ENST00000562889.5
ENST00000563808.1