RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173805

Ensembl transcript IDs: ENST00000310778.5, ENST00000341193.9, ENST00000347901.9, ENST00000393939.6, ENST00000442364.1, ENST00000455021.5, ENST00000458656.5

Found 747 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTGCACTCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTaGGGAGAGGAGACCCTGTTCCACCCCACAACCCTGCAGGAGGCC +
Preference number: 1 (lower is better)
Translates to: ACTRKVQLPDFGVSG*GEETLFHPTTLQEA
Trigger: GGCCTCCTGCAGGGTTGTGGGGTGGAACAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR GCA 90 bp TCAAGGGGTGAGGGGCACATTGTTGGGAAGGCGCTCACAACTCCCTaGCGGTGGAAGCTGGGCCCTGTTCCCTGCTCAGGGCTGAGTCTG +
Preference number: 1 (lower is better)
Translates to: SRGEGHIVGKALTTP*RWKLGPVPCSGLSL
Trigger: CAGACTCAGCCCTGAGCAGGGAACAGGGCCCAGCTTCCACCGGCAGGGAGTTGTGAGCGCCTTCCCAACAATGTGCCCCTCACCCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCC +
Preference number: 1 (lower is better)
Translates to: RLLKEAGLTWPALGR*SSQTLGFLAGERRP
Trigger: GGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 90 bp GAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCAACTGTaGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCAGTC +
Preference number: 1 (lower is better)
Translates to: EALAHLLTPRGLFQL*PLLVKAFVPIAWAV
Trigger: GACTGCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 90 bp CAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCAGACTTTaGGGTTTCTGGCTGGGGAGAGGAGACCCTGTTCCACCCCACAAC +
Preference number: 1 (lower is better)
Translates to: QGSHGLHSEGAAPRL*GFWLGRGDPVPPHN
Trigger: GTTGTGGGGTGGAACAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 90 bp ACACAGGGTCCCATTTCAGAGGATGGGAAGGAGGGTCTGCGGGTGTaGGGCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGT +
Preference number: 1 (lower is better)
Translates to: TQGPISEDGKEGLRV*GLARQQKEGPQAVC
Trigger: ACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGCCCCACACCCGCAGACCCTCCTTCCCATCCTCTGAAATGGGACCCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR TCA 90 bp TCAACAAGAACCAGGGTGGCTACCATTAGCATGGGCATCAAGGGGTaGGGGGCACATTGTTGGGAAGGCGCTCACAACTCCCTGCCGGTG +
Preference number: 1 (lower is better)
Translates to: STRTRVATISMGIKG*GAHCWEGAHNSLPV
Trigger: CACCGGCAGGGAGTTGTGAGCGCCTTCCCAACAATGTGCCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCACCCTGGTTCTTGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 90 bp GTCATCTTTCATGTCCTGCGGCTCCTTAAAGAGGCAGGGCTCACATaGCCTGCACTCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTG +
Preference number: 1 (lower is better)
Translates to: VIFHVLRLLKEAGLT*PALGRCSSQTLGFL
Trigger: CAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 90 bp CCAGGTCCCTCAAGTCAACAAGAACCAGGGTGGCTACCATTAGCATaGGCATCAAGGGGTGAGGGGCACATTGTTGGGAAGGCGCTCACA +
Preference number: 1 (lower is better)
Translates to: PGPSSQQEPGWLPLA*ASRGEGHIVGKALT
Trigger: TGTGAGCGCCTTCCCAACAATGTGCCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCACCCTGGTTCTTGTTGACTTGAGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR GCA 90 bp CAATGGCTGCTGTGCATGAGTGTCACAAGGTCATCTTTCATGTCCTaGGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAA +
Preference number: 1 (lower is better)
Translates to: QWLLCMSVTRSSFMS*GSLKRQGSHGLHSE
Trigger: TTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGACCTTGTGACACTCATGCACAGCAGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 90 bp GAACAGGGAAGACAGCCAGGTCCCTCAAGTCAACAAGAACCAGGGTaGCTACCATTAGCATGGGCATCAAGGGGTGAGGGGCACATTGTT +
Preference number: 1 (lower is better)
Translates to: EQGRQPGPSSQQEPG*LPLAWASRGEGHIV
Trigger: AACAATGTGCCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCACCCTGGTTCTTGTTGACTTGAGGGACCTGGCTGTCTTCCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 90 bp TTTGTTTGCCAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTaGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCA +
Preference number: 1 (lower is better)
Translates to: FVCQFIVCLSGKTGN*ERDKSLLPSVSPVA
Trigger: TGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTGGCAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR TCA 90 bp CACTCCATTCCATCATTGTTCTTGTGCCTGTTGACACCATTACCTTaGGCTACCCGCCACCTGAGGGCTGTAGAGGAGGGAAAGTGTTTT +
Preference number: 1 (lower is better)
Translates to: HSIPSLFLCLLTPLP*ATRHLRAVEEGKCF
Trigger: AAAACACTTTCCCTCCTCTACAGCCCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAACAGGCACAAGAACAATGATGGAATGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR GCA 90 bp TTGCCCCCTGCATGCGCCATAAAGGTCATGGTTCAGTTTATAACCTaGACAAGCTTACATGACACGCCTGCTGAAGCCAGTGCTATTCCA +
Preference number: 1 (lower is better)
Translates to: LPPACAIKVMVQFIT*TSLHDTPAEASAIP
Trigger: TGGAATAGCACTGGCTTCAGCAGGCGTGTCATGTAAGCTTGTGCAGGTTATAAACTGAACCATGACCTTTATGGCGCATGCAGGGGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR TCA 90 bp GAAAAGTGGATGGAGATCTGGAATCCTAAGCAAATGCCACATAAATaGGCACTGACACTACGGTTCCCACTGAAGGGGATCAGAGGTGTC +
Preference number: 1 (lower is better)
Translates to: EKWMEIWNPKQMPHK*ALTLRFPLKGIRGV
Trigger: GACACCTCTGATCCCCTTCAGTGGGAACCGTAGTGTCAGTGCTCATTTATGTGGCATTTGCTTAGGATTCCAGATCTCCATCCACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGGTCAGCCCCCGGGCTaGTCCACCATCCCACCCACC +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLGQPPG*STIPPT
Trigger: GGTGGGTGGGATGGTGGAGCAGCCCGGGGGCTGACC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCAGGCCGTGGGAGGGTaGCTGGCCCTGTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLQAVGG*LALSSS
Trigger: GCTGGAGGACAGGGCCAGCCACCCTCCCACGGCCTG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGACCACAGGCCTGGCCTaGGCGGTGGGCAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLTTGLA*AVGRGL
Trigger: CAGACCCCTGCCCACCGCCCAGGCCAGGCCTGTGGT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGGTCAGCCCCCGGGCTaGTCCACCATCCCACCCACC +
Preference number: 2 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLGQPPG*STIPPT
Trigger: GGTGGGTGGGATGGTGGAGCAGCCCGGGGGCTGACC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCAGGCCGTGGGAGGGTaGCTGGCCCTGTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFQAVGG*LALSSS
Trigger: GCTGGAGGACAGGGCCAGCCACCCTCCCACGGCCTG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCTTCCTCCCAGGCCGTaGGAGGGTGGCTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQLPPRP*EGGWPC
Trigger: ACAGGGCCAGCCACCCTCCCACGGCCTGGGAGGAAG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGGTCAGCCCCCGGGCTaGTCCACCATCCCACCCACC +
Preference number: 2 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSGQPPG*STIPPT
Trigger: GGTGGGTGGGATGGTGGAGCAGCCCGGGGGCTGACC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTGCTGCTGCCACTGCTaGAGAGTTGGAGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLCCCHC*RVGEPG
Trigger: CCCAGGCTCTCCAACTCTGCAGCAGTGGCAGCAGCA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGAGGGCTCACATGGCCTaGACTCGGAAGGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLRAHMA*TRKVQL
Trigger: GAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCTTCCTCCCAGGCCGTaGGAGGGTGGCTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSLPPRP*EGGWPC
Trigger: ACAGGGCCAGCCACCCTCCCACGGCCTGGGAGGAAG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGGTCAGCCCCCGGGCTaGTCCACCATCCCACCCACC +
Preference number: 2 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGGQPPG*STIPPT
Trigger: GGTGGGTGGGATGGTGGAGCAGCCCGGGGGCTGACC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCAGGCCGTGGGAGGGTaGCTGGCCCTGTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGQAVGG*LALSSS
Trigger: GCTGGAGGACAGGGCCAGCCACCCTCCCACGGCCTG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCTTCCTCCCAGGCCGTaGGAGGGTGGCTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPLPPRP*EGGWPC
Trigger: ACAGGGCCAGCCACCCTCCCACGGCCTGGGAGGAAG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGTGTCCTTAGCTCTCTaGGCCTCACCCTCCTCACCT +
Preference number: 2 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQVSLAL*ASPSSP
Trigger: AGGTGAGGAGGGTGAGGCTCAGAGAGCTAAGGACAC...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTGCTGCTGCCACTGCTaGAGAGTTGGAGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLCCCHC*RVGEPG
Trigger: CCCAGGCTCTCCAACTCTGCAGCAGTGGCAGCAGCA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGG +
Preference number: 2 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLPALGR*SSQTLG
Trigger: CCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGAGGGCTCACATGGCCTaGACTCGGAAGGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLRAHMA*TRKVQL
Trigger: GAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTGGGGACACATCACCTaGCACGGAATGAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLWGHIT*HGMRLM
Trigger: CATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGTGTCCTTAGCTCTCTaGGCCTCACCCTCCTCACCT +
Preference number: 2 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLVSLAL*ASPSSP
Trigger: AGGTGAGGAGGGTGAGGCTCAGAGAGCTAAGGACAC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTATTCCACCCGGCAGTaGCCAAAGGGCCATGAGAAT +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLYSTRQ*PKGHEN
Trigger: ATTCTCATGGCCCTTTGGTCACTGCCGGGTGGAATA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCGGTGGGCAGGGGTCTaGTCAACTGTATCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQRWAGV*STVSEG
Trigger: TCCTTCTGATACAGTTGATCAGACCCCTGCCCACCG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGAGAAGCAGGTGGATGTaGACTGGGGCATTGATGACC +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLRSRWM*TGALMT
Trigger: GGTCATCAATGCCCCAGTTCACATCCACCTGCTTCT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGTGCTGCTGCCACTGCTaGAGAGTTGGAGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLCCCHC*RVGEPG
Trigger: CCCAGGCTCTCCAACTCTGCAGCAGTGGCAGCAGCA...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTTTGTCCCCATAGCCTaGGCAGTCCCAGAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLFVPIA*AVPEGL
Trigger: GAGGCCTTCTGGGACTGCCCAGGCTATGGGGACAAA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGGACTGTTCCAACTGTaGCCCTTGCTGGTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLGLFQL*PLLVKA
Trigger: GGCCTTCACCAGCAAGGGCCACAGTTGGAACAGTCC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCTGATGCACGTGCAATaGCTGCTGTGCATGAGTGTC +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLLMHVQ*LLCMSV
Trigger: GACACTCATGCACAGCAGCCATTGCACGTGCATCAG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGACCACAGGCCTGGCCTaGGCGGTGGGCAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMTTGLA*AVGRGL
Trigger: CAGACCCCTGCCCACCGCCCAGGCCAGGCCTGTGGT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGAGAAGCAGGTGGATGTaGACTGGGGCATTGATGACC +
Preference number: 2 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQRSRWM*TGALMT
Trigger: GGTCATCAATGCCCCAGTTCACATCCACCTGCTTCT...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCGTGTTTGTTTTGACTaGTGCTGCCACTGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLRVCFD*CCHCCR
Trigger: TCTGCAGCAGTGGCAGCAGCAGTCAAAACAAACACG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTTTGTCCCCATAGCCTaGGCAGTCCCAGAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSFVPIA*AVPEGL
Trigger: GAGGCCTTCTGGGACTGCCCAGGCTATGGGGACAAA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGGACTGTTCCAACTGTaGCCCTTGCTGGTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSGLFQL*PLLVKA
Trigger: GGCCTTCACCAGCAAGGGCCACAGTTGGAACAGTCC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGGACTGTTCCAACTGTaGCCCTTGCTGGTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLGLFQL*PLLVKA
Trigger: GGCCTTCACCAGCAAGGGCCACAGTTGGAACAGTCC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCACTACGGTTCCCACTaGAGGGGATCAGAGGTGTCT +
Preference number: 2 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLHYGSH*RGSEVS
Trigger: AGACACCTCTGATCCCCTTCAGTGGGAACCGTAGTG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCTGCTGCTGCCACTGCTaGAGAGTTGGAGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGCCCHC*RVGEPG
Trigger: CCCAGGCTCTCCAACTCTGCAGCAGTGGCAGCAGCA...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGCGCTCACAACTCCCTaGCGGTGGAAGCTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMALTTP*RWKLGP
Trigger: AGGGCCCAGCTTCCACCGGCAGGGAGTTGTGAGCGC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGCAAGCGGGCAGAGATaGGAAGCTGAGGCGCAGTGT +
Preference number: 2 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTASGQR*EAEAQC
Trigger: ACACTGCGCCTCAGCTTCCCATCTCTGCCCGCTTGC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTCTTCCTCCCAGGCCGTaGGAGGGTGGCTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGLPPRP*EGGWPC
Trigger: ACAGGGCCAGCCACCCTCCCACGGCCTGGGAGGAAG...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGAGGCAGGGCTCACATaGCCTGCACTCGGAAGGTGC +
Preference number: 2 (lower is better)
Translates to: QWGHITCHGMRLMGADAREAGLT*PALGRC
Trigger: GCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCAGAATGGGGACAGGCTaGGACGGGTACCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGRMGTG*DGYQDS
Trigger: GCTGTCCTGGTACCCGTCCCAGCCTGTCCCCATTCT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGG +
Preference number: 2 (lower is better)
Translates to: QWGHITCHGMRLMGADARPALGR*SSQTLG
Trigger: CCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGTCATCTTTCATGTCCTaGGGCTCCTTAAAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQSSFMS*GSLKRQ
Trigger: CTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGA...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGCAAGCGGGCAGAGATaGGAAGCTGAGGCGCAGTGT +
Preference number: 2 (lower is better)
Translates to: QWGHITCHGMRLMGADARASGQR*EAEAQC
Trigger: ACACTGCGCCTCAGCTTCCCATCTCTGCCCGCTTGC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCACTACGGTTCCCACTaGAGGGGATCAGAGGTGTCT +
Preference number: 2 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGHYGSH*RGSEVS
Trigger: AGACACCTCTGATCCCCTTCAGTGGGAACCGTAGTG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCAAATGCCACATAAATaGGCACTGACACTACGGTTC +
Preference number: 2 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQQMPHK*ALTLRF
Trigger: GAACCGTAGTGTCAGTGCTCATTTATGTGGCATTTG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCAGAGGGTGGGCTGGTaGCAGACACAGGGTCCCATT +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMQRVGW*QTQGPI
Trigger: AATGGGACCCTGTGTCTGTCACCAGCCCACCCTCTG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp ACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCATTGACACCATTACCTTaGGCTACCCGCCACCTGAGG +
Preference number: 2 (lower is better)
Translates to: TGNWERDKSLLPSVSPVALTPLP*ATRHLR
Trigger: CCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAA...TGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCGTGTTTGTTTTGACTaGTGCTGCCACTGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSRVCFD*CCHCCR
Trigger: TCTGCAGCAGTGGCAGCAGCAGTCAAAACAAACACG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGAGGGCTCACATGGCCTaGACTCGGAAGGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMRAHMA*TRKVQL
Trigger: GAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTGGGGACACATCACCTaGCACGGAATGAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGWGHIT*HGMRLM
Trigger: CATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTATGGGAAGGAGGGTCTaGGGGTGTGGGGCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGMGRRV*GCGAWP
Trigger: TGGCCAAGCCCCACACCCGCAGACCCTCCTTCCCAT...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGCAGCTCCCAGACTTTaGGGTTTCTGGCTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: QWGHITCHGMRLMGADARAAPRL*GFWLGR
Trigger: TCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGCCTCTGCAGGCTGCTaGGGAACAGCAAAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMASAGC*GTAKPG
Trigger: TCCAGGCTTTGCTGTTCCCCAGCAGCCTGCAGAGGC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCACTACGGTTCCCACTaGAGGGGATCAGAGGTGTCT +
Preference number: 2 (lower is better)
Translates to: QWGHITCHGMRLMGADARHYGSH*RGSEVS
Trigger: AGACACCTCTGATCCCCTTCAGTGGGAACCGTAGTG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTATTCCACCCGGCAGTaGCCAAAGGGCCATGAGAAT +
Preference number: 2 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGYSTRQ*PKGHEN
Trigger: ATTCTCATGGCCCTTTGGTCACTGCCGGGTGGAATA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGTTTGTTTTGACTGCTaGTGCCACTGCTGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSVCFDC*CHCCRV
Trigger: AACTCTGCAGCAGTGGCAGCAGCAGTCAAAACAAAC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGTTTGTTTTGACTGCTaGTGCCACTGCTGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLVCFDC*CHCCRV
Trigger: AACTCTGCAGCAGTGGCAGCAGCAGTCAAAACAAAC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGG +
Preference number: 2 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGPALGR*SSQTLG
Trigger: CCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGG...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCTGATGCACGTGCAATaGCTGCTGTGCATGAGTGTC +
Preference number: 2 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTLMHVQ*LLCMSV
Trigger: GACACTCATGCACAGCAGCCATTGCACGTGCATCAG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTTGCTCATGAGTGGCTaGTGCAGGCATTGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: ASRAKQETGSVTSPSSLLLLMSG*CRHCWC
Trigger: ACACCAGCAATGCCTGCACCAGCCACTCATGAGCAA...CAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACAGAGGGTGGGCTGGTaGCAGACACAGGGTCCCATT +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGQRVGW*QTQGPI
Trigger: AATGGGACCCTGTGTCTGTCACCAGCCCACCCTCTG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGATCCAGCCCAGGTTCATaGACACAGAGGGTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGSSPGS*TQRVGW
Trigger: CCAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGA...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCGTGTTTGTTTTGACTaGTGCTGCCACTGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGRVCFD*CCHCCR
Trigger: TCTGCAGCAGTGGCAGCAGCAGTCAAAACAAACACG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGG +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGPALGR*SSQTLG
Trigger: CCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTAGCTTTTGCACCAGCTaGAGAGCGAGGGCCGGGGTT +
Preference number: 2 (lower is better)
Translates to: TQATLRYILLSPRVPSRTSFCTS*RARAGV
Trigger: AACCCCGGCCCTCGCTCTGCAGCTGGTGCAAAAGCT...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTCCCATTTCAGAGGATaGGAAGGAGGGTCTGCGGGT +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMSHFRG*EGGSAG
Trigger: ACCCGCAGACCCTCCTTCCCATCCTCTGAAATGGGA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCATGAACACAGAGGGTaGGCTGGTGACAGACACAGG +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMHEHRG*AGDRHR
Trigger: CCTGTGTCTGTCACCAGCCCACCCTCTGTGTTCATG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGATGAGCCACCGCGCCTaGCCTCCCCCAGATATTTTC +
Preference number: 2 (lower is better)
Translates to: TLRYILLSPRVPSRTETRMSHRA*PPPDIF
Trigger: GAAAATATCTGGGGGAGGCCAGGCGCGGTGGCTCAT...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp GCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTGGTGCAGGCATTGCTaGTGTCTCACTCCATTCCAT +
Preference number: 2 (lower is better)
Translates to: ASRAKQETGSVTSPSSLLWCRHC*CLTPFH
Trigger: ATGGAATGGAGTGAGACACCAGCAATGCCTGCACCA...CAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR TCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCAATGGCTGCTGTGCATaGGTGTCACAAGGTCATCTT +
Preference number: 2 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGNGCCA*VSQGHL
Trigger: AAGATGACCTTGTGACACTCATGCACAGCAGCCATT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGTGTCCTTAGCTCTCTaGGCCTCACCCTCCTCACCT +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGVSLAL*ASPSSP
Trigger: AGGTGAGGAGGGTGAGGCTCAGAGAGCTAAGGACAC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGTTTGTTTTGACTGCTaGTGCCACTGCTGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTVCFDC*CHCCRV
Trigger: AACTCTGCAGCAGTGGCAGCAGCAGTCAAAACAAAC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGATTTGTCCCCATAGCCTaGGCAGTCCCAGAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGFVPIA*AVPEGL
Trigger: GAGGCCTTCTGGGACTGCCCAGGCTATGGGGACAAA...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGGACTGTTCCAACTGTaGCCCTTGCTGGTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: TQATLRYILLSPRVPSRTGLFQL*PLLVKA
Trigger: GGCCTTCACCAGCAAGGGCCACAGTTGGAACAGTCC...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGCAGCTCCCAGACTTTaGGGTTTCTGGCTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGAAPRL*GFWLGR
Trigger: TCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCTGATGCACGTGCAATaGCTGCTGTGCATGAGTGTC +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMLMHVQ*LLCMSV
Trigger: GACACTCATGCACAGCAGCCATTGCACGTGCATCAG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGTGGCTACCATTAGCATaGGCATCAAGGGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: TLRYILLSPRVPSRTETRWLPLA*ASRGEG
Trigger: CCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCA...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp TGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTTGGTGCAGGCATTGCTaGTGTCTCACTCCATTCCAT +
Preference number: 2 (lower is better)
Translates to: CLSGKTGNWERDKSLLPSWCRHC*CLTPFH
Trigger: ATGGAATGGAGTGAGACACCAGCAATGCCTGCACCA...AGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR CCA 90 bp ACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAATAATTGCTCATGAGTaGCTGGTGCAGGCATTGCTG +
Preference number: 2 (lower is better)
Translates to: TGNWERDKSLLPSVSPVAIIAHE*LVQALL
Trigger: CAGCAATGCCTGCACCAGCCACTCATGAGCAATTAT...TGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR TCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCAAATGCCACATAAATaGGCACTGACACTACGGTTC +
Preference number: 2 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGQMPHK*ALTLRF
Trigger: GAACCGTAGTGTCAGTGCTCATTTATGTGGCATTTG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACGGTGGGCAGGGGTCTaGTCAACTGTATCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGRWAGV*STVSEG
Trigger: TCCTTCTGATACAGTTGATCAGACCCCTGCCCACCG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGGTAAATAATTGCTCATaGGTGGCTGGTGCAGGCATT +
Preference number: 2 (lower is better)
Translates to: ASRAKQETGSVTSPSSLLVNNCS*VAGAGI
Trigger: AATGCCTGCACCAGCCACTCATGAGCAATTATTTAC...CAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCGTGTTTGTTTTGACTaGTGCTGCCACTGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMRVCFD*CCHCCR
Trigger: TCTGCAGCAGTGGCAGCAGCAGTCAAAACAAACACG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGATCTACCCCGGCTGTGTaGCCCCAAACAAGTGTCCTT +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGSTPAV*PQTSVL
Trigger: AAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAACTAGAGGGGAGGGATaGGCCAGTGAAGGTGCTACA +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGTRGEG*ASEGAT
Trigger: TGTAGCACCTTCACTGGCCCATCCCTCCCCTCTAGT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAAGAAGCAGGTGGATGTaGACTGGGGCATTGATGACC +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGRSRWM*TGALMT
Trigger: GGTCATCAATGCCCCAGTTCACATCCACCTGCTTCT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR TCA 90 bp TCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTTGTTCTTGTGCCTGTTaGCACCATTACCTTGAGCTA +
Preference number: 2 (lower is better)
Translates to: SASRAKQETGSVTSPSSLCSCAC*HHYLEL
Trigger: TAGCTCAAGGTAATGGTGTCAACAGGCACAAGAACA...AAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR-3UTR TCA 90 bp GAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAGTAAATAATTGCTCATaGGTGGCTGGTGCAGGCATT +
Preference number: 2 (lower is better)
Translates to: ERDKSLLPSVSPVARIGGVNNCS*VAGAGI
Trigger: AATGCCTGCACCAGCCACTCATGAGCAATTATTTAC...TCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTCATCTTTCATGTCCTaGGGCTCCTTAAAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMSSFMS*GSLKRQ
Trigger: CTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR GCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGCAACCTCAGCTCACTaGAACCTCAACCTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: TQATLRYILLSPRVPSRTATSAH*NLNLPS
Trigger: GCTTGGAAGGTTGAGGTTGCAGTGAGCTGAGGTTGC...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR GCA 90 bp ACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCACCATCATTGTTCTTGTaGCTGTTGACACCATTACCT +
Preference number: 2 (lower is better)
Translates to: TGNWERDKSLLPSVSPVAPSLFL*LLTPLP
Trigger: AGGTAATGGTGTCAACAGGCACAAGAACAATGATGG...TGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR-3UTR GCA 90 bp TTTGCCAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAGGCTGGTGCAGGCATTaGTGGTGTCTCACTCCATTC +
Preference number: 2 (lower is better)
Translates to: FASLLSASRAKQETGSVTGWCRH*WCLTPF
Trigger: GAATGGAGTGAGACACCAGCAATGCCTGCACCAGCC...TGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCAAGTGGATGGAGATCTaGAATCCTAAGCAAATGCCA +
Preference number: 2 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGKWMEI*NPKQMP
Trigger: TGGCATTTGCTTAGGATTCCAGATCTCCATCCACTT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACAGGTGGATGTGAACTaGGGCATTGATGACCACAGG +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGQVDVN*GIDDHR
Trigger: CCTGTGGTCATCAATGCCCCAGTTCACATCCACCTG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGAAAGCCTCCAACATGTaGGAAAGGGCAGAACATGGA +
Preference number: 2 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMKASNM*ERAEHG
Trigger: TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTTCACAGAGCAGCTTGTaGCTTGCATCCACCTTGCAG +
Preference number: 2 (lower is better)
Translates to: TQATLRYILLSPRVPSRTSQSSL*LASTLQ
Trigger: CTGCAAGGTGGATGCAAGCCACAAGCTGCTCTGTGA...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp AGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTTGCTCATGAGTGGCTaGTGCAGGCATTGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: SLLSASRAKQETGSVTSPLLMSG*CRHCWC
Trigger: ACACCAGCAATGCCTGCACCAGCCACTCATGAGCAA...GGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR CCA 90 bp GACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAACCCAAATAATTGCTCATGAGTaGCTGGTGCAGGCATTGCTG +
Preference number: 2 (lower is better)
Translates to: DKSLLPSVSPVARIGGTQIIAHE*LVQALL
Trigger: CAGCAATGCCTGCACCAGCCACTCATGAGCAATTAT...TTGGGTTCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR TCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTCAAGCAATAGGAGATTaGGAGGTGCTGTGTGAAGGG +
Preference number: 2 (lower is better)
Translates to: TQATLRYILLSPRVPSRTQAIGD*EVLCEG
Trigger: CCCTTCACACAGCACCTCTCAATCTCCTATTGCTTG...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGATGTTTTGACTGCTGCTaGCACTGCTGCAGAGTTGGA +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGCFDCC*HCCRVG
Trigger: TCCAACTCTGCAGCAGTGGCAGCAGCAGTCAAAACA...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTAAGTGGATGGAGATCTaGAATCCTAAGCAAATGCCA +
Preference number: 2 (lower is better)
Translates to: QWGHITCHGMRLMGADARKWMEI*NPKQMP
Trigger: TGGCATTTGCTTAGGATTCCAGATCTCCATCCACTT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCTGGTGCAGGCATTGCTaGTGTCTCACTCCATTCCAT +
Preference number: 2 (lower is better)
Translates to: QFIVCLSGKTGNWERDKSWCRHC*CLTPFH
Trigger: ATGGAATGGAGTGAGACACCAGCAATGCCTGCACCA...GGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR CAA 90 bp TCACTCCATTCCATCATTGTTCTTGTGCCTGTTGACACCATTACCTaGAGCTACCCGCCACCTGAGGGCTGTAGAGGAGGGAAAGTGTTT +
Preference number: 2 (lower is better)
Translates to: SLHSIIVLVPVDTIT*SYPPPEGCRGGKVF
Trigger: AAACACTTTCCCTCCTCTACAGCCCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAACAGGCACAAGAACAATGATGGAATGGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR-3UTR TCA 90 bp TCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATTGTTCTTGTGCCTGTTaGCACCATTACCTTGAGCTA +
Preference number: 2 (lower is better)
Translates to: SRAKQETGSVTSPSSLLYCSCAC*HHYLEL
Trigger: TAGCTCAAGGTAATGGTGTCAACAGGCACAAGAACA...ATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR-3UTR GCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGTTTGTTTTGACTGCTaGTGCCACTGCTGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: TQATLRYILLSPRVPSRTVCFDC*CHCCRV
Trigger: AACTCTGCAGCAGTGGCAGCAGCAGTCAAAACAAAC...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CCA 90 bp CAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCATAATTGCTCATGAGTaGCTGGTGCAGGCATTGCTG +
Preference number: 2 (lower is better)
Translates to: QFIVCLSGKTGNWERDKSIIAHE*LVQALL
Trigger: CAGCAATGCCTGCACCAGCCACTCATGAGCAATTAT...GGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR TCA 90 bp TTTGCCAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAGTAAATAATTGCTCATaGGTGGCTGGTGCAGGCATT +
Preference number: 2 (lower is better)
Translates to: FASLLSASRAKQETGSVTVNNCS*VAGAGI
Trigger: AATGCCTGCACCAGCCACTCATGAGCAATTATTTAC...TGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAAAGTGGATGGAGATCTaGAATCCTAAGCAAATGCCA +
Preference number: 2 (lower is better)
Translates to: VPEDVGKASNMWERAEHGKWMEI*NPKQMP
Trigger: TGGCATTTGCTTAGGATTCCAGATCTCCATCCACTT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 72 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTaGGGCCTCTGCAGGCTGCTGGGGAACAGCAAAGCC +
Preference number: 3 (lower is better)
Translates to: GQAAEGGASSCL*GLCRLLGNSKA
Trigger: GGCTTTGCTGTTCCCCAGCAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR GCA 72 bp GAGGGGCACATTGTTGGGAAGGCGCTCACAACTCCCTaGCGGTGGAAGCTGGGCCCTGTTCCCTGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: EGHIVGKALTTP*RWKLGPVPCSG
Trigger: CCCTGAGCAGGGAACAGGGCCCAGCTTCCACCGGCAGGGAGTTGTGAGCGCCTTCCCAACAATGTGCCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGCCACTGCTGCAGAGTaGGAGAGCCTGGGGGATAGA +
Preference number: 3 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLATAAE*ESLGDR
Trigger: TCTATCCCCCAGGCTCTCCAACTCTGCAGCAGTGGC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGCCACTGCTGCAGAGTaGGAGAGCCTGGGGGATAGA +
Preference number: 3 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSATAAE*ESLGDR
Trigger: TCTATCCCCCAGGCTCTCCAACTCTGCAGCAGTGGC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 72 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTaGGGAGAGGAGACCCTGTTCCACCCCACAACCCTG +
Preference number: 3 (lower is better)
Translates to: RKVQLPDFGVSG*GEETLFHPTTL
Trigger: CAGGGTTGTGGGGTGGAACAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 72 bp CACATTGTTGGGAAGGCGCTCACAACTCCCTGCCGGTaGAAGCTGGGCCCTGTTCCCTGCTCAGGGCTGAGT +
Preference number: 3 (lower is better)
Translates to: HIVGKALTTPCR*KLGPVPCSGLS
Trigger: ACTCAGCCCTGAGCAGGGAACAGGGCCCAGCTTCCACCGGCAGGGAGTTGTGAGCGCCTTCCCAACAATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR GCA 72 bp AAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: KEAGLTWPALGR*SSQTLGFLAGE
Trigger: CTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 72 bp CATGGCCTGCACTCGGAAGGTGCAGCTCCCAGACTTTaGGGTTTCTGGCTGGGGAGAGGAGACCCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: HGLHSEGAAPRL*GFWLGRGDPVP
Trigger: TGGAACAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCGCCACTGCTGCAGAGTaGGAGAGCCTGGGGGATAGA +
Preference number: 3 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGATAAE*ESLGDR
Trigger: TCTATCCCCCAGGCTCTCCAACTCTGCAGCAGTGGC...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 72 bp CATGTCCTGCGGCTCCTTAAAGAGGCAGGGCTCACATaGCCTGCACTCGGAAGGTGCAGCTCCCAGACTTTG +
Preference number: 3 (lower is better)
Translates to: HVLRLLKEAGLT*PALGRCSSQTL
Trigger: CAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCGCAGGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTTCCAACTGTGGCCCTaGCTGGTGAAGGCCTTTGTC +
Preference number: 3 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPFQLWP*LVKAFV
Trigger: GACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTGGCAGCCACAGCTTTaGCACCAGCTGCAGAGCGAG +
Preference number: 3 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMWQPQL*HQLQSE
Trigger: CTCGCTCTGCAGCTGGTGCAAAAGCTGTGGCTGCCA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGGGGTGAGGGGCACATaGTTGGGAAGGCGCTCACAA +
Preference number: 3 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMGVRGT*LGRRSQ
Trigger: TTGTGAGCGCCTTCCCAACAATGTGCCCCTCACCCC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGTGGCAGCCACAGCTTTaGCACCAGCTGCAGAGCGAG +
Preference number: 3 (lower is better)
Translates to: TLRYILLSPRVPSRTETRWQPQL*HQLQSE
Trigger: CTCGCTCTGCAGCTGGTGCAAAAGCTGTGGCTGCCA...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CAA 90 bp TGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGTTGACACCATTACCTaGAGCTACCCGCCACCTGAG +
Preference number: 3 (lower is better)
Translates to: WERDKSLLPSVSPVARIGVDTIT*SYPPPE
Trigger: CTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAAC...TCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR GCA 72 bp TCACCCTCCTCACCTAACCAATGGGGACACATCACCTaGCACGGAATGAGGCTGATGGGAGCTGATGCACGT +
Preference number: 3 (lower is better)
Translates to: SPSSPNQWGHIT*HGMRLMGADAR
Trigger: ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTGGTTAGGTGAGGAGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTTCCAACTGTGGCCCTaGCTGGTGAAGGCCTTTGTC +
Preference number: 3 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMFQLWP*LVKAFV
Trigger: GACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp ATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCGTTGACACCATTACCTaGAGCTACCCGCCACCTGAG +
Preference number: 3 (lower is better)
Translates to: IVCLSGKTGNWERDKSLLVDTIT*SYPPPE
Trigger: CTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAAC...GAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR GCA 72 bp CTGTGCATGAGTGTCACAAGGTCATCTTTCATGTCCTaGGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTG +
Preference number: 3 (lower is better)
Translates to: LCMSVTRSSFMS*GSLKRQGSHGL
Trigger: CAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGACCTTGTGACACTCATGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 72 bp TTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTaGGTGACTCTCTCCCATCCTATCTTTCACAGCCAG +
Preference number: 3 (lower is better)
Translates to: FQVCSGDFTLRQ*VTLSHPIFHSQ
Trigger: CTGGCTGTGAAAGATAGGATGGGAGAGAGTCACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CAA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGGTTCACAGAGCAGCTaGTGGCTTGCATCCACCTTG +
Preference number: 3 (lower is better)
Translates to: TQATLRYILLSPRVPSRTGSQSS*WLASTL
Trigger: CAAGGTGGATGCAAGCCACAAGCTGCTCTGTGAACC...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR CCA 72 bp TCAAGTCAACAAGAACCAGGGTGGCTACCATTAGCATaGGCATCAAGGGGTGAGGGGCACATTGTTGGGAAG +
Preference number: 3 (lower is better)
Translates to: SSQQEPGWLPLA*ASRGEGHIVGK
Trigger: CTTCCCAACAATGTGCCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCACCCTGGTTCTTGTTGACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR CCA 72 bp CAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTaGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCC +
Preference number: 3 (lower is better)
Translates to: QFIVCLSGKTGN*ERDKSLLPSVS
Trigger: GGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR CAA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCACGGAAAGTCGCCATaGATAATTATGCAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMHGKSP*IIMQVA
Trigger: GGCAACCTGCATAATTATCAATGGCGACTTTCCGTG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR-3UTR CAA 90 bp GAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGACACTCCATTCCATCATaGTTCTTGTGCCTGTTGACA +
Preference number: 3 (lower is better)
Translates to: ERDKSLLPSVSPVARIGGHSIPS*FLCLLT
Trigger: TGTCAACAGGCACAAGAACAATGATGGAATGGAGTG...TCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
3UTR-3UTR CAA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTCACGGAAAGTCGCCATaGATAATTATGCAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: TQATLRYILLSPRVPSRTHGKSP*IIMQVA
Trigger: GGCAACCTGCATAATTATCAATGGCGACTTTCCGTG...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
3UTR-3UTR CAA 90 bp TGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAATTCCATCATTGTTCTaGTGCCTGTTGACACCATTA +
Preference number: 3 (lower is better)
Translates to: WERDKSLLPSVSPVARIGIPSLF*CLLTPL
Trigger: TAATGGTGTCAACAGGCACAAGAACAATGATGGAAT...TCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
3UTR GCA 72 bp GCATGCGCCATAAAGGTCATGGTTCAGTTTATAACCTaGACAAGCTTACATGACACGCCTGCTGAAGCCAGT +
Preference number: 3 (lower is better)
Translates to: ACAIKVMVQFIT*TSLHDTPAEAS
Trigger: ACTGGCTTCAGCAGGCGTGTCATGTAAGCTTGTGCAGGTTATAAACTGAACCATGACCTTTATGGCGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
3UTR TCA 72 bp ATGGAGATCTGGAATCCTAAGCAAATGCCACATAAATaGGCACTGACACTACGGTTCCCACTGAAGGGGATC +
Preference number: 3 (lower is better)
Translates to: MEIWNPKQMPHK*ALTLRFPLKGI
Trigger: GATCCCCTTCAGTGGGAACCGTAGTGTCAGTGCTCATTTATGTGGCATTTGCTTAGGATTCCAGATCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGCCGGGCTCCTGCCTTaGCTCCAGCCTCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLAGLLP*LQPPRP
Trigger: CGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCCAGTGCCCCGTGCCTaGGGCTGCGCAGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQPVPRA*GCAEGS
Trigger: GGAGCCCTCTGCGCAGCCGCAGGCACGGGGCACTGG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCCGGGCTCCTGCCTTaGCTCCAGCCTCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQAGLLP*LQPPRP
Trigger: CGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGC...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTGCAGCTTGTCCGGCTaGCGGCAGGGAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLCSLSG*RQGGPR
Trigger: ACGGGGCCCTCCCTGCCGCCAGCCGGACAAGCTGCA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGGGCTGGGCCACGGATaGGAGCCTGGACACCCCCAG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLGLGHG*EPGHPQ
Trigger: CTGGGGGTGTCCAGGCTCCCATCCGTGGCCCAGCCC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGCGAAGGTGCACAGGTaGGTGCTGCTGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLAKVHR*VLLGPR
Trigger: CCGGGGACCCAGCAGCACTCACCTGTGCACCTTCGC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCGGGCGCCGGGCTCCTaGCTTGGCTCCAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFRAPGS*LGSSLR
Trigger: TCGGAGGCTGGAGCCAAGGCAGGAGCCCGGCGCCCG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGTGCAGCTTGTCCGGCTaGCGGCAGGGAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQCSLSG*RQGGPR
Trigger: ACGGGGCCCTCCCTGCCGCCAGCCGGACAAGCTGCA...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCTACTCTCTGTCCAGTaGCCCGTGCCTGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLLLSVQ*PVPAAA
Trigger: CGCAGCCGCAGGCACGGGGCACTGGACAGAGAGTAG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTTCAGCACCTGGGCCTaGAGCCGAGCGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLFSTWA*SRATSC
Trigger: GCAGGAGGTCGCTCGGCTGCAGGCCCAGGTGCTGAA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGATCCGGCAGCGCTGCTaGAGCTTCAGCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLIRQRC*SFSTWA
Trigger: GGCCCAGGTGCTGAAGCTGCAGCAGCGCTGCCGGAT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGCCGGGCTCCTGCCTTaGCTCCAGCCTCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLAGLLP*LQPPRP
Trigger: CGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGCCAACGTAGGCGGCTaGCGTCTTCCAGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLANVGG*RLPDAR
Trigger: GCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCAGGCCGTGGGAGGGTaGCTGGCCCTGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLQAVGG*LALSSS
Trigger: GCTGGAGGACAGGGCCAGCCACCCTCCCACGGCCTG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGACCACAGGCCTGGCCTaGGCGGTGGGCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLTTGLA*AVGRGL
Trigger: CAGACCCCTGCCCACCGCCCAGGCCAGGCCTGTGGT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCTACTCTCTGTCCAGTaGCCCGTGCCTGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQLLSVQ*PVPAAA
Trigger: CGCAGCCGCAGGCACGGGGCACTGGACAGAGAGTAG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTTGGATGGCCGAGAATaGGGACGGGCGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLLDGRE*GRAPGS
Trigger: GGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGATCGGCACGACGATCTaGAGCTTGTCCGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLIGTTI*SLSGWR
Trigger: CCGCCAGCCGGACAAGCTGCAGATCGTCGTGCCGAT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGGTCAGCCCCCGGGCTaGTCCACCATCCCACCCACC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLGQPPG*STIPPT
Trigger: GGTGGGTGGGATGGTGGAGCAGCCCGGGGGCTGACC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGGGGCCTCTGCAGGCTaGTGGGGAACAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLGASAG*WGTAKP
Trigger: AGGCTTTGCTGTTCCCCAGCAGCCTGCAGAGGCCCC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGATGGGAAGGAGGGTCTaGGGGTGTGGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLMGRRV*GCGAWP
Trigger: TGGCCAAGCCCCACACCCGCAGACCCTCCTTCCCAT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGACAGGTGAGTGCTGCTaGGTCCCCGGGTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLTGECC*VPGSEP
Trigger: CGGCTCGGACCCGGGGACCCAGCAGCACTCACCTGT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGCTCCGGAGCGGGACTaGCTGAGGGCGAAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLAPERD*LRAKVH
Trigger: GTGCACCTTCGCCCTCAGCCAGTCCCGCTCCGGAGC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCAGTCCCCCGGCCAGTaGCCCGGGAACCAAACGGCC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLQSPGQ*PGNQTA
Trigger: GGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACTG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCAGTCCCCCGGCCAGTaGCCCGGGAACCAAACGGCC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSQSPGQ*PGNQTA
Trigger: GGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACTG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCGCAGGTCCTGCAGCTaGGAACCCACCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQRRSCS*EPTHTL
Trigger: GAGCGTGTGGGTGGGTTCCCAGCTGCAGGACCTGCG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGAAGGGCCCAAGCCGCTaGCCTCCAGGGCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLKGPSR*PPGLMS
Trigger: TGACATCAGCCCTGGAGGCCAGCGGCTTGGGCCCTT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGCAGGGAGGGCCCCGTaGGGGCACTCACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFAGRAP*GHSPFW
Trigger: CCAGAAAGGTGAGTGCCCCCACGGGGCCCTCCCTGC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCTTCCTCCCAGGCCGTaGGAGGGTGGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFLPPRP*EGGWPC
Trigger: ACAGGGCCAGCCACCCTCCCACGGCCTGGGAGGAAG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGAGGGTCTGCGGGTGTaGGGCTTGGCCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFEGLRV*GLARQQ
Trigger: CTGCTGCCTGGCCAAGCCCCACACCCGCAGACCCTC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCGGAGCGGGACTGGCTaGGGGCGAAGGTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLRSGTG*GRRCTG
Trigger: ACCTGTGCACCTTCGCCCTCAGCCAGTCCCGCTCCG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGGGGCATCACAGGGATaGGCACACTGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLGASQG*AHCRSS
Trigger: GGAAGACCTGCAGTGTGCTCATCCCTGTGATGCCCC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTGCACAGGTGAGTGCTaGTGGGTCCCCGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLCTGEC*WVPGSE
Trigger: CTCGGACCCGGGGACCCAGCAGCACTCACCTGTGCA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCTGTCCAGTGCCCCGTaGCTGCGGCTGCGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPLSSAP*LRLRRG
Trigger: CCCTCTGCGCAGCCGCAGGCACGGGGCACTGGACAG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCGGGCGCCGGGCTCCTaGCTTGGCTCCAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGRAPGS*LGSSLR
Trigger: TCGGAGGCTGGAGCCAAGGCAGGAGCCCGGCGCCCG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTTCAGCACCTGGGCCTaGAGCCGAGCGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLFSTWA*SRATSC
Trigger: GCAGGAGGTCGCTCGGCTGCAGGCCCAGGTGCTGAA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTTCAGCACCTGGGCCTaGAGCCGAGCGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFFSTWA*SRATSC
Trigger: GCAGGAGGTCGCTCGGCTGCAGGCCCAGGTGCTGAA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCATCCGGCAGCGCTGCTaGAGCTTCAGCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFIRQRC*SFSTWA
Trigger: GGCCCAGGTGCTGAAGCTGCAGCAGCGCTGCCGGAT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGATCGGCACGACGATCTaGAGCTTGTCCGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQIGTTI*SLSGWR
Trigger: CCGCCAGCCGGACAAGCTGCAGATCGTCGTGCCGAT...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLPALGR*SSQTLG
Trigger: CCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGAGCTTTTGCACCAGCTaGAGAGCGAGGGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLSFCTS*RARAGV
Trigger: AACCCCGGCCCTCGCTCTGCAGCTGGTGCAAAAGCT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCACAGGTGAGTGCTGCTaGGTCCCCGGGTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSTGECC*VPGSEP
Trigger: CGGCTCGGACCCGGGGACCCAGCAGCACTCACCTGT...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGACAGGTGAGTGCTGCTaGGTCCCCGGGTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLTGECC*VPGSEP
Trigger: CGGCTCGGACCCGGGGACCCAGCAGCACTCACCTGT...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCAGCCGGCACCTTCTTaGCAGCCCCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLQPAPS*QPPAPP
Trigger: AGGAGGAGCTGGGGGCTGCCAAGAAGGTGCCGGCTG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGCAGGGAGGGCCCCGTaGGGGCACTCACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLAGRAP*GHSPFW
Trigger: CCAGAAAGGTGAGTGCCCCCACGGGGCCCTCCCTGC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCTTCCTCCCAGGCCGTaGGAGGGTGGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLLPPRP*EGGWPC
Trigger: ACAGGGCCAGCCACCCTCCCACGGCCTGGGAGGAAG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGAGGAGACACACCACTaGGCAGAGGGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFEETHH*AEGPSP
Trigger: GGGTGAGGGCCCCTCTGCCCAGTGGTGTGTCTCCTC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCCACGGATGGGAGCCTaGACACCCCCAGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSPRMGA*TPPGHW
Trigger: CCAGTGGCCTGGGGGTGTCCAGGCTCCCATCCGTGG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGGCTGGGCCACGGATaGGAGCCTGGACACCCCCAG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPGLGHG*EPGHPQ
Trigger: CTGGGGGTGTCCAGGCTCCCATCCGTGGCCCAGCCC...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCGGAGCGGGACTGGCTaGGGGCGAAGGTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPRSGTG*GRRCTG
Trigger: ACCTGTGCACCTTCGCCCTCAGCCAGTCCCGCTCCG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGCTGGCCTCCAGGGCTaGTGTCACCACGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLAGLQG*CHHVHP
Trigger: CGGATGAACGTGGTGACATCAGCCCTGGAGGCCAGC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCCTACCGCCTGTCCCTaGAGACGTTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLPTACP*RRWKSL
Trigger: GAGGCTTTTCCAACGTCTTCAGGGACAGGCGGTAGG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGTGCACAGGTGAGTGCTaGTGGGTCCCCGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLCTGEC*WVPGSE
Trigger: CTCGGACCCGGGGACCCAGCAGCACTCACCTGTGCA...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTGCACAGGTGAGTGCTaGTGGGTCCCCGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSCTGEC*WVPGSE
Trigger: CTCGGACCCGGGGACCCAGCAGCACTCACCTGTGCA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCTGTCCAGTGCCCCGTaGCTGCGGCTGCGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGLSSAP*LRLRRG
Trigger: CCCTCTGCGCAGCCGCAGGCACGGGGCACTGGACAG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGTGCTGCTGCCACTGCTaGAGAGTTGGAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQCCCHC*RVGEPG
Trigger: CCCAGGCTCTCCAACTCTGCAGCAGTGGCAGCAGCA...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQPALGR*SSQTLG
Trigger: CCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCATGGGAAGGAGGGTCTaGGGGTGTGGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFMGRRV*GCGAWP
Trigger: TGGCCAAGCCCCACACCCGCAGACCCTCCTTCCCAT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCTGGGCCCTGTTCCCTaGTCAGGGCTGAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQLGPVP*SGLSLV
Trigger: TACCAGACTCAGCCCTGAGCAGGGAACAGGGCCCAG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTCCATCCGGCAGCGCTaGTGCAGCTTCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLSIRQR*CSFSTW
Trigger: CCAGGTGCTGAAGCTGCAGCAGCGCTGCCGGATGGA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341193.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTTCCGAGAGGAACTaGGATCCAGAGGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQASERN*DPEVAR
Trigger: CCGAGCCACCTCTGGATCCCAGTTCCTCTCGGAAGC...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGGACATCCCCTTGGATaGCCGAGAATGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLGHPLG*PRMRTG
Trigger: GCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTGTTTCACCAGGGACTaGCCGATGCGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLCFTRD*PMRAAV
Trigger: CACTGCAGCTCGCATCGGCCAGTCCCTGGTGAAACA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGAGACCCAGTGGACACTaGGGGTTGCTGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLRPSGH*GLLAEG
Trigger: ACCCTCCGCCAGCAACCCCCAGTGTCCACTGGGTCT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCAGCCGGCACCTTCTTaGCAGCCCCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLQPAPS*QPPAPP
Trigger: AGGAGGAGCTGGGGGCTGCCAAGAAGGTGCCGGCTG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGGGCATCTTGCCAGTTaGCCAGCTGCTGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLGHLAS*PAAGGH
Trigger: ATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTGCAGCTTGTCCGGCTaGCGGCAGGGAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTCSLSG*RQGGPR
Trigger: ACGGGGCCCTCCCTGCCGCCAGCCGGACAAGCTGCA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCACCACAGGCCTGGCCTaGGCGGTGGGCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGTTGLA*AVGRGL
Trigger: CAGACCCCTGCCCACCGCCCAGGCCAGGCCTGTGGT...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGCCTCAAGCTGTCTGTaGGGCCTCTGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFASSCL*GLCRLL
Trigger: CAGCAGCCTGCAGAGGCCCCACAGACAGCTTGAGGC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGCCTCAAGCTGTCTGTaGGGCCTCTGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLASSCL*GLCRLL
Trigger: CAGCAGCCTGCAGAGGCCCCACAGACAGCTTGAGGC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGAGGGTCTGCGGGTGTaGGGCTTGGCCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPEGLRV*GLARQQ
Trigger: CTGCTGCCTGGCCAAGCCCCACACCCGCAGACCCTC...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCCACGGATGGGAGCCTaGACACCCCCAGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPPRMGA*TPPGHW
Trigger: CCAGTGGCCTGGGGGTGTCCAGGCTCCCATCCGTGG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCGGGCTGGGCCACGGATaGGAGCCTGGACACCCCCAG +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGGLGHG*EPGHPQ
Trigger: CTGGGGGTGTCCAGGCTCCCATCCGTGGCCCAGCCC...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGCGAAGGTGCACAGGTaGGTGCTGCTGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGAKVHR*VLLGPR
Trigger: CCGGGGACCCAGCAGCACTCACCTGTGCACCTTCGC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGGGGCATCACAGGGATaGGCACACTGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFGASQG*AHCRSS
Trigger: GGAAGACCTGCAGTGTGCTCATCCCTGTGATGCCCC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGCTGGCCTCCAGGGCTaGTGTCACCACGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLAGLQG*CHHVHP
Trigger: CGGATGAACGTGGTGACATCAGCCCTGGAGGCCAGC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGCTGGCCTCCAGGGCTaGTGTCACCACGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSAGLQG*CHHVHP
Trigger: CGGATGAACGTGGTGACATCAGCCCTGGAGGCCAGC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTCCAGCCCAGGTTCATaGACACAGAGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLSSPGS*TQRVGW
Trigger: CCAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCCTACCGCCTGTCCCTaGAGACGTTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQPTACP*RRWKSL
Trigger: GAGGCTTTTCCAACGTCTTCAGGGACAGGCGGTAGG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGATGGGCATCAAGGGGTaGGGGGCACATTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLMGIKG*GAHCWE
Trigger: TTCCCAACAATGTGCCCCTCACCCCTTGATGCCCAT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTGCACAGGTGAGTGCTaGTGGGTCCCCGGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPCTGEC*WVPGSE
Trigger: CTCGGACCCGGGGACCCAGCAGCACTCACCTGTGCA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTTGGATGGCCGAGAATaGGGACGGGCGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGLDGRE*GRAPGS
Trigger: GGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTTGGATGGCCGAGAATaGGGACGGGCGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTLDGRE*GRAPGS
Trigger: GGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCTGGCGTCTTCCAGATaGCCGCTGCCTTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLLASSR*PLPFQS
Trigger: GGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCCAGGGACTGGCCGATaGGAGCTGCAGTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLPGTGR*ELQCSG
Trigger: ACCTGAACACTGCAGCTCGCATCGGCCAGTCCCTGG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGGGCAGTGGTGCTGGTaGAGCAATGCCTCCTGCGAA +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLGQWCW*SNASCE
Trigger: TTCGCAGGAGGCATTGCTGCACCAGCACCACTGCCC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTACATCCGGCAGCGCTaGTGCAGCTTCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFYIRQR*CSFSTW
Trigger: CCAGGTGCTGAAGCTGCAGCAGCGCTGCCGGATGTA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310778.5
ENST00000347901.9
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCAGGGCTCACATGGCCTaGACTCGGAAGGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFRAHMA*TRKVQL
Trigger: GAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGACTGGGATCCAGAGGTaGCTCGGGATCCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLTGIQR*LGILLS
Trigger: AGAGAGTAGGATCCCGAGCCACCTCTGGATCCCAGT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGGACATCCCCTTGGATaGCCGAGAATGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSGHPLG*PRMRTG
Trigger: GCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGACCGGACATCCCCTTaGATGGCCGAGAATGCGGAC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFDRTSP*MAENAD
Trigger: GTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGACCGGACATCCCCTTaGATGGCCGAGAATGCGGAC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLDRTSP*MAENAD
Trigger: GTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTGTGGGCAGTGGTGCTaGTGCAGCAATGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLCGQWC*CSNASC
Trigger: GCAGGAGGCATTGCTGCACCAGCACCACTGCCCACA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTCAGCCAGCGTCTCCTaGAAACCAGGAAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLSASVS*KPGRVS
Trigger: GGAGACTCTTCCTGGTTTCCAGGAGACGCTGGCTGA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGAAGGGCCCAAGCCGCTaGCCTCCAGGGCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLKGPSR*PPGLMS
Trigger: TGACATCAGCCCTGGAGGCCAGCGGCTTGGGCCCTT...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGCAGGGAGGGCCCCGTaGGGGCACTCACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGAGRAP*GHSPFW
Trigger: CCAGAAAGGTGAGTGCCCCCACGGGGCCCTCCCTGC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCTTCCTCCCAGGCCGTaGGAGGGTGGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTLPPRP*EGGWPC
Trigger: ACAGGGCCAGCCACCCTCCCACGGCCTGGGAGGAAG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGAGGCAGGGCTCACATaGCCTGCACTCGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLEAGLT*PALGRC
Trigger: GCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTCTACCCCGGCTGTGTaGCCCCAAACAAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLSTPAV*PQTSVL
Trigger: AAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGCCTCTGCAGGCTGCTaGGGAACAGCAAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFASAGC*GTAKPG
Trigger: TCCAGGCTTTGCTGTTCCCCAGCAGCCTGCAGAGGC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCACAACTCCCTGCCGGTaGAAGCTGGGCCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSTTPCR*KLGPVP
Trigger: GGGAACAGGGCCCAGCTTCCACCGGCAGGGAGTTGT...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGATGAGCCACCGCGCCTaGCCTCCCCCAGATATTTTC +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQMSHRA*PPPDIF
Trigger: GAAAATATCTGGGGGAGGCCAGGCGCGGTGGCTCAT...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGAGCCTCCCGAGTAGCTaGGATTACAGGCATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLSLPSS*DYRHVC
Trigger: GCACACATGCCTGTAATCCCAGCTACTCGGGAGGCT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGATTCATGTCCAGGTGTaGAGGGCCCAAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLIHVQV*RAQAAG
Trigger: GCCAGCGGCTTGGGCCCTTCACACCTGGACATGAAT...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGTCCAGCCCAGGTTCATaGACACAGAGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLSSPGS*TQRVGW
Trigger: CCAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGA...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCCAGCCCCCAGCTATTaGGGAACAAAGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQPAPSY*GTKVWE
Trigger: TTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCTGTCCAGTGCCCCGTaGCTGCGGCTGCGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMLSSAP*LRLRRG
Trigger: CCCTCTGCGCAGCCGCAGGCACGGGGCACTGGACAG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCTACTCTCTGTCCAGTaGCCCGTGCCTGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTLLSVQ*PVPAAA
Trigger: CGCAGCCGCAGGCACGGGGCACTGGACAGAGAGTAG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCTGGCGTCTTCCAGATaGCCGCTGCCTTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSLASSR*PLPFQS
Trigger: GGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCTGGCGTCTTCCAGATaGCCGCTGCCTTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLLASSR*PLPFQS
Trigger: GGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCTGGCCGATGCGAGCTaGAGTGTTCAGGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLLADAS*SVQVPL
Trigger: GAGAGGGACCTGAACACTGCAGCTCGCATCGGCCAG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCCAGGGACTGGCCGATaGGAGCTGCAGTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLPGTGR*ELQCSG
Trigger: ACCTGAACACTGCAGCTCGCATCGGCCAGTCCCTGG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGGGCAGTGGTGCTGGTaGAGCAATGCCTCCTGCGAA +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSGQWCW*SNASCE
Trigger: TTCGCAGGAGGCATTGCTGCACCAGCACCACTGCCC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCTGGCCTCCGAAAACTaGTCCACACACTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLLASEN*STHSRM
Trigger: CATTCTGGAGTGTGTGGAGCAGTTTTCGGAGGCCAG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTACATCCGGCAGCGCTaGTGCAGCTTCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSYIRQR*CSFSTW
Trigger: CCAGGTGCTGAAGCTGCAGCAGCGCTGCCGGATGTA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310778.5
ENST00000347901.9
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCCGCATGATATCCGCTaGCAGCATCAACCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQPHDIR*QHQPFL
Trigger: GAGGAAGGGTTGATGCTGGCAGCGGATATCATGCGG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCACGTTCATCCGCGTTaGCTCATCCAGCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQHVHPR*LIQLQF
Trigger: GAACTGGAGCTGGATGAGGCAACGCGGATGAACGTG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGGTCAGCCCCCGGGCTaGTCCACCATCCCACCCACC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMGQPPG*STIPPT
Trigger: GGTGGGTGGGATGGTGGAGCAGCCCGGGGGCTGACC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLPALGR*SSQTLG
Trigger: CCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGGGCCTCTGCAGGCTaGTGGGGAACAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPGASAG*WGTAKP
Trigger: AGGCTTTGCTGTTCCCCAGCAGCCTGCAGAGGCCCC...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCTGGGCCCTGTTCCCTaGTCAGGGCTGAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSLGPVP*SGLSLV
Trigger: TACCAGACTCAGCCCTGAGCAGGGAACAGGGCCCAG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGCGCTCACAACTCCCTaGCGGTGGAAGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGALTTP*RWKLGP
Trigger: AGGGCCCAGCTTCCACCGGCAGGGAGTTGTGAGCGC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTCCATCCGGCAGCGCTaGTGCAGCTTCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPSIRQR*CSFSTW
Trigger: CCAGGTGCTGAAGCTGCAGCAGCGCTGCCGGATGGA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341193.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGGCCGGGCTCCTGCCTTaGCTCCAGCCTCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TLRYILLSPRVPSRTETRAGLLP*LQPPRP
Trigger: CGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGC...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCAGTCCCCCGGCCAGTaGCCCGGGAACCAAACGGCC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMQSPGQ*PGNQTA
Trigger: GGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACTG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGCCAACGTAGGCGGCTaGCGTCTTCCAGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTANVGG*RLPDAR
Trigger: GCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTGTTTCACCAGGGACTaGCCGATGCGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFCFTRD*PMRAAV
Trigger: CACTGCAGCTCGCATCGGCCAGTCCCTGGTGAAACA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCACACGCTCTCTTCCTaGAGCTGCATCTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLHTLSS*SCIWIS
Trigger: GGAAATCCAGATGCAGCTCCAGGAAGAGAGCGTGTG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTAAGGGCCCAAGCCGCTaGCCTCCAGGGCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPKGPSR*PPGLMS
Trigger: TGACATCAGCCCTGGAGGCCAGCGGCTTGGGCCCTT...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGGGCATCTTGCCAGTTaGCCAGCTGCTGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFGHLAS*PAAGGH
Trigger: ATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGCAAGCGGGCAGAGATaGGAAGCTGAGGCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLASGQR*EAEAQC
Trigger: ACACTGCGCCTCAGCTTCCCATCTCTGCCCGCTTGC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTTTGTCCCCATAGCCTaGGCAGTCCCAGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFFVPIA*AVPEGL
Trigger: GAGGCCTTCTGGGACTGCCCAGGCTATGGGGACAAA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGACTAGAGGGGAGGGATaGGCCAGTGAAGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQTRGEG*ASEGAT
Trigger: TGTAGCACCTTCACTGGCCCATCCCTCCCCTCTAGT...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCAGAATGGGGACAGGCTaGGACGGGTACCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSRMGTG*DGYQDS
Trigger: GCTGTCCTGGTACCCGTCCCAGCCTGTCCCCATTCT...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCAGGTGGATGTGAACTaGGGCATTGATGACCACAGG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLQVDVN*GIDDHR
Trigger: CCTGTGGTCATCAATGCCCCAGTTCACATCCACCTG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGAGGAGACACACCACTaGGCAGAGGGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGEETHH*AEGPSP
Trigger: GGGTGAGGGCCCCTCTGCCCAGTGGTGTGTCTCCTC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCCACGGATGGGAGCCTaGACACCCCCAGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARPRMGA*TPPGHW
Trigger: CCAGTGGCCTGGGGGTGTCCAGGCTCCCATCCGTGG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCATAGTTTTCCAGCCTaGGCACCAGCACCTCCGACA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFHSFPA*APAPPT
Trigger: TGTCGGAGGTGCTGGTGCTCAGGCTGGAAAACTATG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGCTGGCCTCCAGGGCTaGTGTCACCACGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTAGLQG*CHHVHP
Trigger: CGGATGAACGTGGTGACATCAGCCCTGGAGGCCAGC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCGGTGGGCAGGGGTCTaGTCAACTGTATCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLRWAGV*STVSEG
Trigger: TCCTTCTGATACAGTTGATCAGACCCCTGCCCACCG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGATGGGCATCAAGGGGTaGGGGGCACATTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLMGIKG*GAHCWE
Trigger: TTCCCAACAATGTGCCCCTCACCCCTTGATGCCCAT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCATGGGCATCAAGGGGTaGGGGGCACATTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFMGIKG*GAHCWE
Trigger: TTCCCAACAATGTGCCCCTCACCCCTTGATGCCCAT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCCAGCCCCCAGCTATTaGGGAACAAAGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFPAPSY*GTKVWE
Trigger: TTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCAAGCAATAGGAGATTaGGAGGTGCTGTGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLQAIGD*EVLCEG
Trigger: CCCTTCACACAGCACCTCTCAATCTCCTATTGCTTG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTCACAGCCAGGCCACTaGGTCAGTCTCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSSQPGH*VSLWGE
Trigger: TTCACCCCAGAGACTGACTCAGTGGCCTGGCTGTGA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTCGGGCGCCGGGCTCCTaGCTTGGCTCCAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: TQATLRYILLSPRVPSRTRAPGS*LGSSLR
Trigger: TCGGAGGCTGGAGCCAAGGCAGGAGCCCGGCGCCCG...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCTGGCCGATGCGAGCTaGAGTGTTCAGGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPLADAS*SVQVPL
Trigger: GAGAGGGACCTGAACACTGCAGCTCGCATCGGCCAG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGCAGGGCTTCCAGCTTaGTGTTCTCCTCCATCAAAA +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLAGLPA*CSPPSK
Trigger: TTTTGATGGAGGAGAACAGCAAGCTGGAAGCCCTGC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGTGCAGCAATGCCTCCTaGGAAATCAGCTTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQCSNAS*EISLGA
Trigger: TGCCCCTAAGCTGATTTCGCAGGAGGCATTGCTGCA...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGAGCCTCAGCTTCTCCTaGAAGGCTTCCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLSLSFS*KASSCG
Trigger: CCCACAGCTGGAAGCCTTGCAGGAGAAGCTGAGGCT...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTATCCGGCAGCGCTGCTaGAGCTTCAGCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARIRQRC*SFSTWA
Trigger: GGCCCAGGTGCTGAAGCTGCAGCAGCGCTGCCGGAT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCTCTCTTCCTGGAGCTaGATCTGGATTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLLSSWS*IWISFS
Trigger: GGAGAAGGAAATCCAGATGCAGCTCCAGGAAGAGAG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGTGGACACTGGGGGTTaGTGGCGGAGGGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGVDTGG*WRRVFT
Trigger: GGTGAAGACCCTCCGCCAGCAACCCCCAGTGTCCAC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCACGTTCATCCGCGTTaGCTCATCCAGCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFHVHPR*LIQLQF
Trigger: GAACTGGAGCTGGATGAGGCAACGCGGATGAACGTG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCATCGGCACGACGATCTaGAGCTTGTCCGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTIGTTI*SLSGWR
Trigger: CCGCCAGCCGGACAAGCTGCAGATCGTCGTGCCGAT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTGGGGACACATCACCTaGCACGGAATGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLWGHIT*HGMRLM
Trigger: CATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTGGGGACACATCACCTaGCACGGAATGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFWGHIT*HGMRLM
Trigger: CATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCGGGGCCTCTGCAGGCTaGTGGGGAACAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGGASAG*WGTAKP
Trigger: AGGCTTTGCTGTTCCCCAGCAGCCTGCAGAGGCCCC...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCTGGGCCCTGTTCCCTaGTCAGGGCTGAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPLGPVP*SGLSLV
Trigger: TACCAGACTCAGCCCTGAGCAGGGAACAGGGCCCAG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCTGTTGACACCATTACCTTGAGCTACCCGCCACCTGAGGGCTGTAGAGGAGGGTGCCAGTTGGCCAGCTaGTTCTTGGCAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PVDTITLSYPPPEGCRGGCQLAS*FLAAPS
Trigger: GCTGGGGGCTGCCAAGAAGCAGCTGGCCAACTGGCA...CCCTCCTCTACAGCCCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442364.1
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGAACCAAACGGCCCTTaGAATACGAAGCGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLEPNGP*NTKRVH
Trigger: GTGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGTGTTTCACCAGGGACTaGCCGATGCGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLCFTRD*PMRAAV
Trigger: CACTGCAGCTCGCATCGGCCAGTCCCTGGTGAAACA...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCAGCCATCTGTTGGCTaGCCTCCGAAAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFQPSVG*PPKTAP
Trigger: TGGAGCAGTTTTCGGAGGCCAGCCAACAGATGGCTG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCAGCCATCTGTTGGCTaGCCTCCGAAAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLQPSVG*PPKTAP
Trigger: TGGAGCAGTTTTCGGAGGCCAGCCAACAGATGGCTG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCAGCTCAGCCATCTGTTaGCTGGCCTCCGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFSSAIC*LASENC
Trigger: GCAGTTTTCGGAGGCCAGCCAACAGATGGCTGAGCT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCGACACTGGGGGTTGCTaGCGGAGGGTCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGDTGGC*RRVFTS
Trigger: GGAGGTGAAGACCCTCCGCCAGCAACCCCCAGTGTC...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR CCA 90 bp GGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAAAGGGCCCAAGCCGCTaGCCTCCAGGGCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: GNWERDKSLLPSVSPVARKGPSR*PPGLMS
Trigger: TGACATCAGCCCTGGAGGCCAGCGGCTTGGGCCCTT...TCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGGGCACTCACCTTTCTaGAGCATCTTCCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLGHSPF*SIFHLS
Trigger: GCTGAGGTGGAAGATGCTCCAGAAAGGTGAGTGCCC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGCAGCTCCCAGACTTTaGGGTTTCTGGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLAAPRL*GFWLGR
Trigger: TCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGAGGCAGGGCTCACATaGCCTGCACTCGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGEAGLT*PALGRC
Trigger: GCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCACTAGAGGGGAGGGATaGGCCAGTGAAGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFTRGEG*ASEGAT
Trigger: TGTAGCACCTTCACTGGCCCATCCCTCCCCTCTAGT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTACCACAGGCCTGGCCTaGGCGGTGGGCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGTTGLA*AVGRGL
Trigger: CAGACCCCTGCCCACCGCCCAGGCCAGGCCTGTGGT...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGCCTCAAGCTGTCTGTaGGGCCTCTGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTASSCL*GLCRLL
Trigger: CAGCAGCCTGCAGAGGCCCCACAGACAGCTTGAGGC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTCCCATTTCAGAGGATaGGAAGGAGGGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLSHFRG*EGGSAG
Trigger: ACCCGCAGACCCTCCTTCCCATCCTCTGAAATGGGA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTCCCATTTCAGAGGATaGGAAGGAGGGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFSHFRG*EGGSAG
Trigger: ACCCGCAGACCCTCCTTCCCATCCTCTGAAATGGGA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCATGAACACAGAGGGTaGGCTGGTGACAGACACAGG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLHEHRG*AGDRHR
Trigger: CCTGTGTCTGTCACCAGCCCACCCTCTGTGTTCATG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTGGCTACCATTAGCATaGGCATCAAGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFWLPLA*ASRGEG
Trigger: CCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGCTCTCCCAGACAGGTaGGAGAAGCTGGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLALPDR*EKLDQE
Trigger: TTCCTGATCCAGCTTCTCCCACCTGTCTGGGAGAGC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341193.9
CDS-3UTR TCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTCAAGAGTGTCGAGTTaGGAGGCCTCTTCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLSRVSS*EASSLS
Trigger: GCTGAGAGAAGAGGCCTCTCAACTCGACACTCTTGA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCATAGTTTTCCAGCCTaGGCACCAGCACCTCCGACA +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSHSFPA*APAPPT
Trigger: TGTCGGAGGTGCTGGTGCTCAGGCTGGAAAACTATG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGCTGGCCTCCAGGGCTaGTGTCACCACGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: WERDKSLLPSVSPVARIGAGLQG*CHHVHP
Trigger: CGGATGAACGTGGTGACATCAGCCCTGGAGGCCAGC...TCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR TCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCATTCATGTCCAGGTGTaGAGGGCCCAAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGIHVQV*RAQAAG
Trigger: GCCAGCGGCTTGGGCCCTTCACACCTGGACATGAAT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCATTCATGTCCAGGTGTaGAGGGCCCAAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGIHVQV*RAQAAG
Trigger: GCCAGCGGCTTGGGCCCTTCACACCTGGACATGAAT...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGTGTCCTTAGCTCTCTaGGCCTCACCCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPVSLAL*ASPSSP
Trigger: AGGTGAGGAGGGTGAGGCTCAGAGAGCTAAGGACAC...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTATTCCACCCGGCAGTaGCCAAAGGGCCATGAGAAT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFYSTRQ*PKGHEN
Trigger: ATTCTCATGGCCCTTTGGTCACTGCCGGGTGGAATA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGAGAAGCAGGTGGATGTaGACTGGGGCATTGATGACC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLRSRWM*TGALMT
Trigger: GGTCATCAATGCCCCAGTTCACATCCACCTGCTTCT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCAGAAGCAGGTGGATGTaGACTGGGGCATTGATGACC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFRSRWM*TGALMT
Trigger: GGTCATCAATGCCCCAGTTCACATCCACCTGCTTCT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCAGAGGGTGGGCTGGTaGCAGACACAGGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGQRVGW*QTQGPI
Trigger: AATGGGACCCTGTGTCTGTCACCAGCCCACCCTCTG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTCCAGCCCAGGTTCATaGACACAGAGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTSSPGS*TQRVGW
Trigger: CCAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCTCCAGCCCAGGTTCATaGACACAGAGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGSSPGS*TQRVGW
Trigger: CCAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGA...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACTGTCCAGTGCCCCGTaGCTGCGGCTGCGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGLSSAP*LRLRRG
Trigger: CCCTCTGCGCAGCCGCAGGCACGGGGCACTGGACAG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTTTGGATGGCCGAGAATaGGGACGGGCGCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGLDGRE*GRAPGS
Trigger: GGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAA...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCTGGCGTCTTCCAGATaGCCGCTGCCTTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGLASSR*PLPFQS
Trigger: GGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCCAGGGACTGGCCGATaGGAGCTGCAGTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGPGTGR*ELQCSG
Trigger: ACCTGAACACTGCAGCTCGCATCGGCCAGTCCCTGG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGTGCTGGTGCAGCAATaGCTCCTGCGAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFVLVQQ*LLRNQL
Trigger: AAGCTGATTTCGCAGGAGGCATTGCTGCACCAGCAC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGGGCAGTGGTGCTGGTaGAGCAATGCCTCCTGCGAA +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTGQWCW*SNASCE
Trigger: TTCGCAGGAGGCATTGCTGCACCAGCACCACTGCCC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCTGGCCTCCGAAAACTaGTCCACACACTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLLASEN*STHSRM
Trigger: CATTCTGGAGTGTGTGGAGCAGTTTTCGGAGGCCAG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGATCCGGCAGCGCTGCTaGAGCTTCAGCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMIRQRC*SFSTWA
Trigger: GGCCCAGGTGCTGAAGCTGCAGCAGCGCTGCCGGAT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGTTTGTTTTGACTGCTaGTGCCACTGCTGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLVCFDC*CHCCRV
Trigger: AACTCTGCAGCAGTGGCAGCAGCAGTCAAAACAAAC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCGTGTTTGTTTTGACTaGTGCTGCCACTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQRVCFD*CCHCCR
Trigger: TCTGCAGCAGTGGCAGCAGCAGTCAAAACAAACACG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCCTGCACTCGGAAGGTaGAGCTCCCAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTPALGR*SSQTLG
Trigger: CCCCAAAGTCTGGGAGCTGCACCTTCCGAGTGCAGG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCAGGGCTCACATGGCCTaGACTCGGAAGGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGRAHMA*TRKVQL
Trigger: GAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCT...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCAGGGCTCACATGGCCTaGACTCGGAAGGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGRAHMA*TRKVQL
Trigger: GAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCAGCTTTTGCACCAGCTaGAGAGCGAGGGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGSFCTS*RARAGV
Trigger: AACCCCGGCCCTCGCTCTGCAGCTGGTGCAAAAGCT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCAGCTTTTGCACCAGCTaGAGAGCGAGGGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTSFCTS*RARAGV
Trigger: AACCCCGGCCCTCGCTCTGCAGCTGGTGCAAAAGCT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGCTTCCGAGAGGAACTaGGATCCAGAGGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTASERN*DPEVAR
Trigger: CCGAGCCACCTCTGGATCCCAGTTCCTCTCGGAAGC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGAACCAAACGGCCCTTaGAATACGAAGCGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLEPNGP*NTKRVH
Trigger: GTGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGCCAACGTAGGCGGCTaGCGTCTTCCAGATGCCCGC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMANVGG*RLPDAR
Trigger: GCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTGTGGGCAGTGGTGCTaGTGCAGCAATGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTCGQWC*CSNASC
Trigger: GCAGGAGGCATTGCTGCACCAGCACCACTGCCCACA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTGTGGGCAGTGGTGCTaGTGCAGCAATGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGCGQWC*CSNASC
Trigger: GCAGGAGGCATTGCTGCACCAGCACCACTGCCCACA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGTCAGCCAGCGTCTCCTaGAAACCAGGAAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLSASVS*KPGRVS
Trigger: GGAGACTCTTCCTGGTTTCCAGGAGACGCTGGCTGA...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTCAGCCAGCGTCTCCTaGAAACCAGGAAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSSASVS*KPGRVS
Trigger: GGAGACTCTTCCTGGTTTCCAGGAGACGCTGGCTGA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAACCCAACAGCCGGCACCTTCTTaGCAGCCCCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DKSLLPSVSPVARIGGTQQPAPS*QPPAPP
Trigger: AGGAGGAGCTGGGGGCTGCCAAGAAGGTGCCGGCTG...TTGGGTTCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGGCATCTTGCCAGTTaGCCAGCTGCTGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPGHLAS*PAAGGH
Trigger: ATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCC...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGGGCACTCACCTTTCTaGAGCATCTTCCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLGHSPF*SIFHLS
Trigger: GCTGAGGTGGAAGATGCTCCAGAAAGGTGAGTGCCC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGATGCAGCTTGTCCGGCTaGCGGCAGGGAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGCSLSG*RQGGPR
Trigger: ACGGGGCCCTCCCTGCCGCCAGCCGGACAAGCTGCA...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCGCAAGCGGGCAGAGATaGGAAGCTGAGGCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGASGQR*EAEAQC
Trigger: ACACTGCGCCTCAGCTTCCCATCTCTGCCCGCTTGC...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGCAAGCGGGCAGAGATaGGAAGCTGAGGCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGASGQR*EAEAQC
Trigger: ACACTGCGCCTCAGCTTCCCATCTCTGCCCGCTTGC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGACTGTTCCAACTGTaGCCCTTGCTGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPGLFQL*PLLVKA
Trigger: GGCCTTCACCAGCAAGGGCCACAGTTGGAACAGTCC...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTCTACCCCGGCTGTGTaGCCCCAAACAAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSSTPAV*PQTSVL
Trigger: AAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGCCTCAAGCTGTCTGTaGGGCCTCTGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARASSCL*GLCRLL
Trigger: CAGCAGCCTGCAGAGGCCCCACAGACAGCTTGAGGC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGAAAGCCTCCAACATGTaGGAAAGGGCAGAACATGGA +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLKASNM*ERAEHG
Trigger: TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCAACAAGAACCAGGGTaGCTACCATTAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQQQEPG*LPLAWA
Trigger: TGCCCATGCTAATGGTAGCCACCCTGGTTCTTGTTG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGGGCTGGGCCACGGATaGGAGCCTGGACACCCCCAG +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGGLGHG*EPGHPQ
Trigger: CTGGGGGTGTCCAGGCTCCCATCCGTGGCCCAGCCC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGACAGGTGGGAGAAGCTaGATCAGGAAGGCAGTACAC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLTGGRS*IRKAVH
Trigger: GTGTACTGCCTTCCTGATCCAGCTTCTCCCACCTGT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341193.9
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCACGGGGTTTCTCCATTaGTCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFTGFLH*SGWSRT
Trigger: AGTTCGAGACCAGCCTGACCAATGGAGAAACCCCGT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp GCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGCTGGGGCTCTTAGGCTaGATGTGTCCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ASRAKQETGSVTSPSSLLLGLLG*MCPLWA
Trigger: TGCCCAGAGGGGACACATCCAGCCTAAGAGCCCCAG...CAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455021.5
CDS-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGCGAAGGTGCACAGGTaGGTGCTGCTGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGAKVHR*VLLGPR
Trigger: CCGGGGACCCAGCAGCACTCACCTGTGCACCTTCGC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTCAAGAGTGTCGAGTTaGGAGGCCTCTTCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSSRVSS*EASSLS
Trigger: GCTGAGAGAAGAGGCCTCTCAACTCGACACTCTTGA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCCACACACTCCAGAATaGGCATCTGTTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFPHTPE*ASVPHP
Trigger: AGGATGAGGAACAGATGCTCATTCTGGAGTGTGTGG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCCACACACTCCAGAATaGGCATCTGTTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLPHTPE*ASVPHP
Trigger: AGGATGAGGAACAGATGCTCATTCTGGAGTGTGTGG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCAGAGGGTGGGCTGGTaGCAGACACAGGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARQRVGW*QTQGPI
Trigger: AATGGGACCCTGTGTCTGTCACCAGCCCACCCTCTG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCCTACCGCCTGTCCCTaGAGACGTTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTPTACP*RRWKSL
Trigger: GAGGCTTTTCCAACGTCTTCAGGGACAGGCGGTAGG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCCAGCCCCCAGCTATTaGGGAACAAAGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPPAPSY*GTKVWE
Trigger: TTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCCAGGGACTGGCCGATaGGAGCTGCAGTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARPGTGR*ELQCSG
Trigger: ACCTGAACACTGCAGCTCGCATCGGCCAGTCCCTGG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTGCAGCAATGCCTCCTaGGAAATCAGCTTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSCSNAS*EISLGA
Trigger: TGCCCCTAAGCTGATTTCGCAGGAGGCATTGCTGCA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGTGCTGGTGCAGCAATaGCTCCTGCGAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLVLVQQ*LLRNQL
Trigger: AAGCTGATTTCGCAGGAGGCATTGCTGCACCAGCAC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCAGCCTCAGCTTCTCCTaGAAGGCTTCCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGSLSFS*KASSCG
Trigger: CCCACAGCTGGAAGCCTTGCAGGAGAAGCTGAGGCT...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTTCTCCCGCAGGTCCTaGAGCTGGGAACCCACCCAC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMFSRRS*SWEPTH
Trigger: GTGGGTGGGTTCCCAGCTGCAGGACCTGCGGGAGAA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCCGCATGATATCCGCTaGCAGCATCAACCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPPHDIR*QHQPFL
Trigger: GAGGAAGGGTTGATGCTGGCAGCGGATATCATGCGG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCACGTTCATCCGCGTTaGCTCATCCAGCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPHVHPR*LIQLQF
Trigger: GAACTGGAGCTGGATGAGGCAACGCGGATGAACGTG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCGTGTTTGTTTTGACTaGTGCTGCCACTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFRVCFD*CCHCCR
Trigger: TCTGCAGCAGTGGCAGCAGCAGTCAAAACAAACACG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGTGCAATGGCTGCTGTaGATGAGTGTCACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFVQWLL*MSVTRS
Trigger: TGACCTTGTGACACTCATGCACAGCAGCCATTGCAC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGATGGGAAGGAGGGTCTaGGGGTGTGGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMMGRRV*GCGAWP
Trigger: TGGCCAAGCCCCACACCCGCAGACCCTCCTTCCCAT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCTTCGCCCTGCCAAGTaGACACACACACTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPLRPAK*THTLPR
Trigger: TCTAGGGAGTGTGTGTGTGCACTTGGCAGGGCGAAG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGCAACCTCAGCTCACTaGAACCTCAACCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLATSAH*NLNLPS
Trigger: GCTTGGAAGGTTGAGGTTGCAGTGAGCTGAGGTTGC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGATTACAGGCATGTGTaGCACCATGCCCAGTTAATT +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLDYRHV*HHAQLI
Trigger: AATTAACTGGGCATGGTGGCACACATGCCTGTAATC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAACAGGTGAGTGCTGCTaGGTCCCCGGGTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGTGECC*VPGSEP
Trigger: CGGCTCGGACCCGGGGACCCAGCAGCACTCACCTGT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTACTGGGATCCAGAGGTaGCTCGGGATCCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPTGIQR*LGILLS
Trigger: AGAGAGTAGGATCCCGAGCCACCTCTGGATCCCAGT...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGACTTTGACGTCTTCCTaGGTGATCTTTTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLTLTSS*VIFLTG
Trigger: GCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGATAAAATCTCCTCCTTaGCTGAGCCCAGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLIKSPP*LSPAGL
Trigger: AAGCCCTGCTGGGCTCAGCCAAGGAGGAGATTTTAT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTCCCGCAAGTTCACCTaGTGTCTGAGGTATAAAATC +
Preference number: 4 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLSRKFT*CLRYKI
Trigger: GATTTTATACCTCAGACACCAGGTGAACTTGCGGGA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCAATCATACCTTAGGCTaGATGTGTCCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFNHTLG*MCPLWA
Trigger: TGCCCAGAGGGGACACATCCAGCCTAAGGTATGATT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGCAGCTCCCAGACTTTaGGGTTTCTGGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTAAPRL*GFWLGR
Trigger: TCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGAGGCAGGGCTCACATaGCCTGCACTCGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMEAGLT*PALGRC
Trigger: GCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTACTAGAGGGGAGGGATaGGCCAGTGAAGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPTRGEG*ASEGAT
Trigger: TGTAGCACCTTCACTGGCCCATCCCTCCCCTCTAGT...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCAGGTGGATGTGAACTaGGGCATTGATGACCACAGG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLQVDVN*GIDDHR
Trigger: CCTGTGGTCATCAATGCCCCAGTTCACATCCACCTG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGCCTCTGCAGGCTGCTaGGGAACAGCAAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARASAGC*GTAKPG
Trigger: TCCAGGCTTTGCTGTTCCCCAGCAGCCTGCAGAGGC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTCCCATTTCAGAGGATaGGAAGGAGGGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPSHFRG*EGGSAG
Trigger: ACCCGCAGACCCTCCTTCCCATCCTCTGAAATGGGA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGACAACTCCCTGCCGGTaGAAGCTGGGCCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMTTPCR*KLGPVP
Trigger: GGGAACAGGGCCCAGCTTCCACCGGCAGGGAGTTGT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTGGCTACCATTAGCATaGGCATCAAGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPWLPLA*ASRGEG
Trigger: CCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCCAACAAGAACCAGGGTaGCTACCATTAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFQQEPG*LPLAWA
Trigger: TGCCCATGCTAATGGTAGCCACCCTGGTTCTTGTTG...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGGAGGAGACACACCACTaGGCAGAGGGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: TLRYILLSPRVPSRTETREETHH*AEGPSP
Trigger: GGGTGAGGGCCCCTCTGCCCAGTGGTGTGTCTCCTC...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp ATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCTGGCCAGCTGCTTCTTaGCAGCCCCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IVCLSGKTGNWERDKSLLWPAAS*QPPAPP
Trigger: AGGAGGAGCTGGGGGCTGCCAAGAAGCAGCTGGCCA...GAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442364.1
CDS-3UTR TCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGAGTTCACCTGGTGTCTaGGGTATAAAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQSSPGV*GIKSPP
Trigger: AGGAGGAGATTTTATACCTCAGACACCAGGTGAACT...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGGGGCATCACAGGGATaGGCACACTGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMGASQG*AHCRSS
Trigger: GGAAGACCTGCAGTGTGCTCATCCCTGTGATGCCCC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCATAGTTTTCCAGCCTaGGCACCAGCACCTCCGACA +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGHSFPA*APAPPT
Trigger: TGTCGGAGGTGCTGGTGCTCAGGCTGGAAAACTATG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCACTACGGTTCCCACTaGAGGGGATCAGAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTHYGSH*RGSEVS
Trigger: AGACACCTCTGATCCCCTTCAGTGGGAACCGTAGTG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCCAGCCCCCAGCTATTaGGGAACAAAGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTPAPSY*GTKVWE
Trigger: TTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGCAAGCAATAGGAGATTaGGAGGTGCTGTGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLQAIGD*EVLCEG
Trigger: CCCTTCACACAGCACCTCTCAATCTCCTATTGCTTG...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTTGACACCATTACCTTaGGCTACCCGCCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: VCLSGKTGNWERDKSLLPLTPLP*ATRHLR
Trigger: CCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAA...AGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCTGGCCGATGCGAGCTaGAGTGTTCAGGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMLADAS*SVQVPL
Trigger: GAGAGGGACCTGAACACTGCAGCTCGCATCGGCCAG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGCAGGGCTTCCAGCTTaGTGTTCTCCTCCATCAAAA +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLAGLPA*CSPPSK
Trigger: TTTTGATGGAGGAGAACAGCAAGCTGGAAGCCCTGC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTTCTCCGAAGCCAGCTaGTTCTGCAACTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLFSEAS*FCNFSV
Trigger: GACTGAAAAGTTGCAGAAGCAGCTGGCTTCGGAGAA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310778.5
ENST00000347901.9
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCCGCATGATATCCGCTaGCAGCATCAACCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTPHDIR*QHQPFL
Trigger: GAGGAAGGGTTGATGCTGGCAGCGGATATCATGCGG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp ACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCACACGTTCATCCGCGTTaGCTCATCCAGCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TGNWERDKSLLPSVSPVAHVHPR*LIQLQF
Trigger: GAACTGGAGCTGGATGAGGCAACGCGGATGAACGTG...TGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTGCTGCTGCCACTGCTaGAGAGTTGGAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMCCCHC*RVGEPG
Trigger: CCCAGGCTCTCCAACTCTGCAGCAGTGGCAGCAGCA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGTGTTTTGACTGCTGCTaGCACTGCTGCAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLCFDCC*HCCRVG
Trigger: TCCAACTCTGCAGCAGTGGCAGCAGCAGTCAAAACA...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTCATCTTTCATGTCCTaGGGCTCCTTAAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFSSFMS*GSLKRQ
Trigger: CTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTCATCTTTCATGTCCTaGGGCTCCTTAAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLSSFMS*GSLKRQ
Trigger: CTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGTGCAATGGCTGCTGTaGATGAGTGTCACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLVQWLL*MSVTRS
Trigger: TGACCTTGTGACACTCATGCACAGCAGCCATTGCAC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGAGCTTTTGCACCAGCTaGAGAGCGAGGGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMSFCTS*RARAGV
Trigger: AACCCCGGCCCTCGCTCTGCAGCTGGTGCAAAAGCT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp ACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAGGCTGGTGCAGGCATTaGTGGTGTCTCACTCCATTC +
Preference number: 4 (lower is better)
Translates to: TGNWERDKSLLPSVSPVAGWCRH*WCLTPF
Trigger: GAATGGAGTGAGACACCAGCAATGCCTGCACCAGCC...TGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCACTGGGATCCAGAGGTaGCTCGGGATCCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTTGIQR*LGILLS
Trigger: AGAGAGTAGGATCCCGAGCCACCTCTGGATCCCAGT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGCTTCCGAGAGGAACTaGGATCCAGAGGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMASERN*DPEVAR
Trigger: CCGAGCCACCTCTGGATCCCAGTTCCTCTCGGAAGC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGACCGGACATCCCCTTaGATGGCCGAGAATGCGGAC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMDRTSP*MAENAD
Trigger: GTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTTGTTTCACCAGGGACTaGCCGATGCGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARCFTRD*PMRAAV
Trigger: CACTGCAGCTCGCATCGGCCAGTCCCTGGTGAAACA...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCATAAAATCTCCTCCTTaGCTGAGCCCAGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSIKSPP*LSPAGL
Trigger: AAGCCCTGCTGGGCTCAGCCAAGGAGGAGATTTTAT...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCAGCTCAGCCATCTGTTaGCTGGCCTCCGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTSSAIC*LASENC
Trigger: GCAGTTTTCGGAGGCCAGCCAACAGATGGCTGAGCT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCAGCTCAGCCATCTGTTaGCTGGCCTCCGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGSSAIC*LASENC
Trigger: GCAGTTTTCGGAGGCCAGCCAACAGATGGCTGAGCT...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTGGATGTGTCCCCTCTaGGCATCTCATAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFWMCPL*ASHNSS
Trigger: AGAGGAATTATGAGATGCCCAGAGGGGACACATCCA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACAGCCGGCACCTTCTTaGCAGCCCCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGQPAPS*QPPAPP
Trigger: AGGAGGAGCTGGGGGCTGCCAAGAAGGTGCCGGCTG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGAAGGGCCCAAGCCGCTaGCCTCCAGGGCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: TLRYILLSPRVPSRTETRKGPSR*PPGLMS
Trigger: TGACATCAGCCCTGGAGGCCAGCGGCTTGGGCCCTT...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGCAAGCGGGCAGAGATaGGAAGCTGAGGCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMASGQR*EAEAQC
Trigger: ACACTGCGCCTCAGCTTCCCATCTCTGCCCGCTTGC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTCTACCCCGGCTGTGTaGCCCCAAACAAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGSTPAV*PQTSVL
Trigger: AAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTCTACCCCGGCTGTGTaGCCCCAAACAAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTSTPAV*PQTSVL
Trigger: AAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCACTAGAGGGGAGGGATaGGCCAGTGAAGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTTRGEG*ASEGAT
Trigger: TGTAGCACCTTCACTGGCCCATCCCTCCCCTCTAGT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGAGAATGGGGACAGGCTaGGACGGGTACCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMRMGTG*DGYQDS
Trigger: GCTGTCCTGGTACCCGTCCCAGCCTGTCCCCATTCT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTCCCATTTCAGAGGATaGGAAGGAGGGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGSHFRG*EGGSAG
Trigger: ACCCGCAGACCCTCCTTCCCATCCTCTGAAATGGGA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCATGAACACAGAGGGTaGGCTGGTGACAGACACAGG +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGHEHRG*AGDRHR
Trigger: CCTGTGTCTGTCACCAGCCCACCCTCTGTGTTCATG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTGGCTACCATTAGCATaGGCATCAAGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTWLPLA*ASRGEG
Trigger: CCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCTGGCTACCATTAGCATaGGCATCAAGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGWLPLA*ASRGEG
Trigger: CCCCTCACCCCTTGATGCCCATGCTAATGGTAGCCA...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCAACAAGAACCAGGGTaGCTACCATTAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSQQEPG*LPLAWA
Trigger: TGCCCATGCTAATGGTAGCCACCCTGGTTCTTGTTG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGAGGAGACACACCACTaGGCAGAGGGGCCCTCACCC +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGEETHH*AEGPSP
Trigger: GGGTGAGGGCCCCTCTGCCCAGTGGTGTGTCTCCTC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCAGAGTCTCCTCTTCCTaGAGCTGCATCTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSRVSSS*SCIWIS
Trigger: GGAAATCCAGATGCAGCTCCAGGAAGAGGAGACTCT...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347901.9
CDS-3UTR CCA 90 bp TCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTGGGCATCTTGCCAGTTaGCCAGCTGCTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SASRAKQETGSVTSPSSLGHLAS*PAASWQ
Trigger: CTGCCAAGAAGCAGCTGGCCAACTGGCAAGATGCCC...AAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442364.1
CDS-3UTR TCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCAGTTCACCTGGTGTCTaGGGTATAAAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFSSPGV*GIKSPP
Trigger: AGGAGGAGATTTTATACCTCAGACACCAGGTGAACT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGGGGGCATCACAGGGATaGGCACACTGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLRYILLSPRVPSRTETRGASQG*AHCRSS
Trigger: GGAAGACCTGCAGTGTGCTCATCCCTGTGATGCCCC...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR TCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCCACACACTCCAGAATaGGCATCTGTTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPPHTPE*ASVPHP
Trigger: AGGATGAGGAACAGATGCTCATTCTGGAGTGTGTGG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGTGTCCTTAGCTCTCTaGGCCTCACCCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMVSLAL*ASPSSP
Trigger: AGGTGAGGAGGGTGAGGCTCAGAGAGCTAAGGACAC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTATTCCACCCGGCAGTaGCCAAAGGGCCATGAGAAT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTYSTRQ*PKGHEN
Trigger: ATTCTCATGGCCCTTTGGTCACTGCCGGGTGGAATA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCGGTGGGCAGGGGTCTaGTCAACTGTATCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARRWAGV*STVSEG
Trigger: TCCTTCTGATACAGTTGATCAGACCCCTGCCCACCG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCCTACCGCCTGTCCCTaGAGACGTTGGAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMPTACP*RRWKSL
Trigger: GAGGCTTTTCCAACGTCTTCAGGGACAGGCGGTAGG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTATGGGCATCAAGGGGTaGGGGGCACATTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARMGIKG*GAHCWE
Trigger: TTCCCAACAATGTGCCCCTCACCCCTTGATGCCCAT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCTATCTGTGGTTAGTTaGCTCCACGGATGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGLSVVS*LHGCRA
Trigger: GGCTCTGCATCCGTGGAGTCAACTAACCACAGATAG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCTGCAGCAATGCCTCCTaGGAAATCAGCTTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGCSNAS*EISLGA
Trigger: TGCCCCTAAGCTGATTTCGCAGGAGGCATTGCTGCA...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCTGGCCTCCGAAAACTaGTCCACACACTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGLASEN*STHSRM
Trigger: CATTCTGGAGTGTGTGGAGCAGTTTTCGGAGGCCAG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCACGTTCATCCGCGTTaGCTCATCCAGCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARHVHPR*LIQLQF
Trigger: GAACTGGAGCTGGATGAGGCAACGCGGATGAACGTG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTGTTTTGACTGCTGCTaGCACTGCTGCAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPCFDCC*HCCRVG
Trigger: TCCAACTCTGCAGCAGTGGCAGCAGCAGTCAAAACA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGGGGCCTCTGCAGGCTaGTGGGGAACAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGGASAG*WGTAKP
Trigger: AGGCTTTGCTGTTCCCCAGCAGCCTGCAGAGGCCCC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCAGATCCTTTATTTCCTaGACCACACGCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSRSFIS*TTRTQA
Trigger: AGCCTGTGTGCGTGTGGTGCAGGAAATAAAGGATCT...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTACCCTGTTCCAGGTCTaGTCTGGGGACTTCACCCTA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARTLFQV*SGDFTL
Trigger: TAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTGGCTGGTGCAGGCATTaGTGGTGTCTCACTCCATTC +
Preference number: 4 (lower is better)
Translates to: SASRAKQETGSVTSPSSLGWCRH*WCLTPF
Trigger: GAATGGAGTGAGACACCAGCAATGCCTGCACCAGCC...AAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGGACATCCCCTTGGATaGCCGAGAATGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGGHPLG*PRMRTG
Trigger: GCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCACTTTGACGTCTTCCTaGGTGATCTTTTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFTLTSS*VIFLTG
Trigger: GCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTCCCGCAAGTTCACCTaGTGTCTGAGGTATAAAATC +
Preference number: 4 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFSRKFT*CLRYKI
Trigger: GATTTTATACCTCAGACACCAGGTGAACTTGCGGGA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTAGCTCAGCCATCTGTTaGCTGGCCTCCGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARSSAIC*LASENC
Trigger: GCAGTTTTCGGAGGCCAGCCAACAGATGGCTGAGCT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTTCAGCCAGCGTCTCCTaGAAACCAGGAAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARSASVS*KPGRVS
Trigger: GGAGACTCTTCCTGGTTTCCAGGAGACGCTGGCTGA...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTAATCATACCTTAGGCTaGATGTGTCCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPNHTLG*MCPLWA
Trigger: TGCCCAGAGGGGACACATCCAGCCTAAGGTATGATT...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGAAGTGGATGGAGATCTaGAATCCTAAGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQKWMEI*NPKQMP
Trigger: TGGCATTTGCTTAGGATTCCAGATCTCCATCCACTT...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGGACTGTTCCAACTGTaGCCCTTGCTGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMGLFQL*PLLVKA
Trigger: GGCCTTCACCAGCAAGGGCCACAGTTGGAACAGTCC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGCAGCTCCCAGACTTTaGGGTTTCTGGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMAAPRL*GFWLGR
Trigger: TCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCTGATGCACGTGCAATaGCTGCTGTGCATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGLMHVQ*LLCMSV
Trigger: GACACTCATGCACAGCAGCCATTGCACGTGCATCAG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTAGAATGGGGACAGGCTaGGACGGGTACCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGRMGTG*DGYQDS
Trigger: GCTGTCCTGGTACCCGTCCCAGCCTGTCCCCATTCT...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCAGGTGGATGTGAACTaGGGCATTGATGACCACAGG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTQVDVN*GIDDHR
Trigger: CCTGTGGTCATCAATGCCCCAGTTCACATCCACCTG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCATGAACACAGAGGGTaGGCTGGTGACAGACACAGG +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARHEHRG*AGDRHR
Trigger: CCTGTGTCTGTCACCAGCCCACCCTCTGTGTTCATG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGATTGCTCATGAGTGGCTaGTGCAGGCATTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GNWERDKSLLPSVSPVARLLMSG*CRHCWC
Trigger: ACACCAGCAATGCCTGCACCAGCCACTCATGAGCAA...TCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCATAGTTTTCCAGCCTaGGCACCAGCACCTCCGACA +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMHSFPA*APAPPT
Trigger: TGTCGGAGGTGCTGGTGCTCAGGCTGGAAAACTATG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAATTCATGTCCAGGTGTaGAGGGCCCAAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGIHVQV*RAQAAG
Trigger: GCCAGCGGCTTGGGCCCTTCACACCTGGACATGAAT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCAAATGCCACATAAATaGGCACTGACACTACGGTTC +
Preference number: 4 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSQMPHK*ALTLRF
Trigger: GAACCGTAGTGTCAGTGCTCATTTATGTGGCATTTG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTGTGTCCTTAGCTCTCTaGGCCTCACCCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGVSLAL*ASPSSP
Trigger: AGGTGAGGAGGGTGAGGCTCAGAGAGCTAAGGACAC...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR TCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTTATTCCACCCGGCAGTaGCCAAAGGGCCATGAGAAT +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARYSTRQ*PKGHEN
Trigger: ATTCTCATGGCCCTTTGGTCACTGCCGGGTGGAATA...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCGGTGGGCAGGGGTCTaGTCAACTGTATCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMRWAGV*STVSEG
Trigger: TCCTTCTGATACAGTTGATCAGACCCCTGCCCACCG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCAAGCAATAGGAGATTaGGAGGTGCTGTGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTQAIGD*EVLCEG
Trigger: CCCTTCACACAGCACCTCTCAATCTCCTATTGCTTG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCCTTCCAAGCTCAAGTaGTCCTCTCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMPSKLK*SSHLSL
Trigger: GAGGCTGAGGTGAGAGGATCACTTGAGCTTGGAAGG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACTGGCCGATGCGAGCTaGAGTGTTCAGGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGLADAS*SVQVPL
Trigger: GAGAGGGACCTGAACACTGCAGCTCGCATCGGCCAG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCGCAGGGCTTCCAGCTTaGTGTTCTCCTCCATCAAAA +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTAGLPA*CSPPSK
Trigger: TTTTGATGGAGGAGAACAGCAAGCTGGAAGCCCTGC...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTTGCAGCAATGCCTCCTaGGAAATCAGCTTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARCSNAS*EISLGA
Trigger: TGCCCCTAAGCTGATTTCGCAGGAGGCATTGCTGCA...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGTGCTGGTGCAGCAATaGCTCCTGCGAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARVLVQQ*LLRNQL
Trigger: AAGCTGATTTCGCAGGAGGCATTGCTGCACCAGCAC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTAGCCTCAGCTTCTCCTaGAAGGCTTCCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGSLSFS*KASSCG
Trigger: CCCACAGCTGGAAGCCTTGCAGGAGAAGCTGAGGCT...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp ATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCGCATGATATCCGCTaGCAGCATCAACCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IVCLSGKTGNWERDKSLLPHDIR*QHQPFL
Trigger: GAGGAAGGGTTGATGCTGGCAGCGGATATCATGCGG...GAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442364.1
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCGTGTTTGTTTTGACTaGTGCTGCCACTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTRVCFD*CCHCCR
Trigger: TCTGCAGCAGTGGCAGCAGCAGTCAAAACAAACACG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAAGGGCTCACATGGCCTaGACTCGGAAGGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGRAHMA*TRKVQL
Trigger: GAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTCATCTTTCATGTCCTaGGGCTCCTTAAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPSSFMS*GSLKRQ
Trigger: CTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTGGGGACACATCACCTaGCACGGAATGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMWGHIT*HGMRLM
Trigger: CATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCTCTACAACTTCGCCCTaGCAAGTGCACACACACACT +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGSTTSP*QVHTHT
Trigger: AGTGTGTGTGTGCACTTGGCAGGGCGAAGTTGTAGA...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGAGTCTCGCTGTTGTTaGCCAGACTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMESRCC*PDWSAV
Trigger: CACTGCACTCCAGTCTGGGCAACAACAGCGAGACTC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGGCATGTGTGCCACCATaGCCAGTTAATTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLACVPP*PVNFVS
Trigger: AGATACAAAATTAACTGGGCATGGTGGCACACATGC...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp AACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGCTGGTGCAGGCATTaGTGGTGTCTCACTCCATTC +
Preference number: 4 (lower is better)
Translates to: NWERDKSLLPSVSPVARIGWCRH*WCLTPF
Trigger: GAATGGAGTGAGACACCAGCAATGCCTGCACCAGCC...TATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCATAAAATCTCCTCCTTaGCTGAGCCCAGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGIKSPP*LSPAGL
Trigger: AAGCCCTGCTGGGCTCAGCCAAGGAGGAGATTTTAT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTTCCTGGAGCTGCATCTaGATTTCCTTCTCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARSWSCI*ISFSEA
Trigger: GGCTTCGGAGAAGGAAATCCAGATGCAGCTCCAGGA...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310778.5
ENST00000347901.9
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTGGATGTGTCCCCTCTaGGCATCTCATAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPWMCPL*ASHNSS
Trigger: AGAGGAATTATGAGATGCCCAGAGGGGACACATCCA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGGGCACTCACCTTTCTaGAGCATCTTCCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMGHSPF*SIFHLS
Trigger: GCTGAGGTGGAAGATGCTCCAGAAAGGTGAGTGCCC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCTGATGCACGTGCAATaGCTGCTGTGCATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARLMHVQ*LLCMSV
Trigger: GACACTCATGCACAGCAGCCATTGCACGTGCATCAG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCAGGTGGATGTGAACTaGGGCATTGATGACCACAGG +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARQVDVN*GIDDHR
Trigger: CCTGTGGTCATCAATGCCCCAGTTCACATCCACCTG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCAACAAGAACCAGGGTaGCTACCATTAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGQQEPG*LPLAWA
Trigger: TGCCCATGCTAATGGTAGCCACCCTGGTTCTTGTTG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGATGGTGCAGGCATTGCTaGTGTCTCACTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: GNWERDKSLLPSVSPVARWCRHC*CLTPFH
Trigger: ATGGAATGGAGTGAGACACCAGCAATGCCTGCACCA...TCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTCAAGAGTGTCGAGTTaGGAGGCCTCTTCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMSRVSS*EASSLS
Trigger: GCTGAGAGAAGAGGCCTCTCAACTCGACACTCTTGA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCAATGGCTGCTGTGCATaGGTGTCACAAGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTNGCCA*VSQGHL
Trigger: AAGATGACCTTGTGACACTCATGCACAGCAGCCATT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATTTGACACCATTACCTTaGGCTACCCGCCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRAKQETGSVTSPSSLLYLTPLP*ATRHLR
Trigger: CCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAA...ATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGCAGGGCTTCCAGCTTaGTGTTCTCCTCCATCAAAA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARAGLPA*CSPPSK
Trigger: TTTTGATGGAGGAGAACAGCAAGCTGGAAGCCCTGC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGTGCTGGTGCAGCAATaGCTCCTGCGAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMVLVQQ*LLRNQL
Trigger: AAGCTGATTTCGCAGGAGGCATTGCTGCACCAGCAC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAAGCCTCAGCTTCTCCTaGAAGGCTTCCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGSLSFS*KASSCG
Trigger: CCCACAGCTGGAAGCCTTGCAGGAGAAGCTGAGGCT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTTCTCCGAAGCCAGCTaGTTCTGCAACTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTFSEAS*FCNFSV
Trigger: GACTGAAAAGTTGCAGAAGCAGCTGGCTTCGGAGAA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310778.5
ENST00000347901.9
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGTTTGTTTTGACTGCTaGTGCCACTGCTGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGVCFDC*CHCCRV
Trigger: AACTCTGCAGCAGTGGCAGCAGCAGTCAAAACAAAC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTCATCTTTCATGTCCTaGGGCTCCTTAAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTSSFMS*GSLKRQ
Trigger: CTGCCTCTTTAAGGAGCCGCAGGACATGAAAGATGA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGTGCAATGGCTGCTGTaGATGAGTGTCACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARVQWLL*MSVTRS
Trigger: TGACCTTGTGACACTCATGCACAGCAGCCATTGCAC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCAGATCCTTTATTTCCTaGACCACACGCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTRSFIS*TTRTQA
Trigger: AGCCTGTGTGCGTGTGGTGCAGGAAATAAAGGATCT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTATGATCTCCGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGMISAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCGGAGATCAT...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGTTGGAGTACAGTGGTaGAACCTCAGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARVGVQW*NLSSLQ
Trigger: TTGCAGTGAGCTGAGGTTGCACCACTGTACTCCAAC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTCCTGGAGCTGCATCTaGATTTCCTTCTCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMSWSCI*ISFSEA
Trigger: GGCTTCGGAGAAGGAAATCCAGATGCAGCTCCAGGA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310778.5
ENST00000347901.9
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACAGAGGCACGCTGTATaGGTAATGGGTGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGQRHAV*VMGGRP
Trigger: GGGTCTGCCACCCATTACCCATACAGCGTGCCTCTG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTAATCATACCTTAGGCTaGATGTGTCCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARNHTLG*MCPLWA
Trigger: TGCCCAGAGGGGACACATCCAGCCTAAGGTATGATT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGGGCATCTTGCCAGTTaGCCAGCTGCTGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGGHLAS*PAAGGH
Trigger: ATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCGGGCATCTTGCCAGTTaGCCAGCTGCTGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: QFIVCLSGKTGNWERDKSGHLAS*PAAGGH
Trigger: ATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCC...GGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGAAGTGGATGGAGATCTaGAATCCTAAGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLKWMEI*NPKQMP
Trigger: TGGCATTTGCTTAGGATTCCAGATCTCCATCCACTT...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCAAAGCCTCCAACATGTaGGAAAGGGCAGAACATGGA +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGKASNM*ERAEHG
Trigger: TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTT...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCAAAGCCTCCAACATGTaGGAAAGGGCAGAACATGGA +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGKASNM*ERAEHG
Trigger: TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGACACAGAGACACTTGTaGTTACAAACAGTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLTQRHL*LQTVGR
Trigger: CCTACCTACTGTTTGTAACCACAAGTGTCTCTGTGT...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGATGGTGCAGGCATTGCTaGTGTCTCACTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: ERDKSLLPSVSPVARIGGWCRHC*CLTPFH
Trigger: ATGGAATGGAGTGAGACACCAGCAATGCCTGCACCA...TCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CCA 90 bp AACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATATTGCTCATGAGTGGCTaGTGCAGGCATTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NWERDKSLLPSVSPVARILLMSG*CRHCWC
Trigger: ACACCAGCAATGCCTGCACCAGCCACTCATGAGCAA...TATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CCA 90 bp GGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAATTGCTCATGAGTaGCTGGTGCAGGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: GNWERDKSLLPSVSPVARIIAHE*LVQALL
Trigger: CAGCAATGCCTGCACCAGCCACTCATGAGCAATTAT...TCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCAGTTCACCTGGTGTCTaGGGTATAAAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTSSPGV*GIKSPP
Trigger: AGGAGGAGATTTTATACCTCAGACACCAGGTGAACT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCCACACACTCCAGAATaGGCATCTGTTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMPHTPE*ASVPHP
Trigger: AGGATGAGGAACAGATGCTCATTCTGGAGTGTGTGG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACACTACGGTTCCCACTaGAGGGGATCAGAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGHYGSH*RGSEVS
Trigger: AGACACCTCTGATCCCCTTCAGTGGGAACCGTAGTG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCAAATGCCACATAAATaGGCACTGACACTACGGTTC +
Preference number: 4 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTQMPHK*ALTLRF
Trigger: GAACCGTAGTGTCAGTGCTCATTTATGTGGCATTTG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTAATGGCTGCTGTGCATaGGTGTCACAAGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARNGCCA*VSQGHL
Trigger: AAGATGACCTTGTGACACTCATGCACAGCAGCCATT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp GCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTGTTCTTGTGCCTGTTaGCACCATTACCTTGAGCTA +
Preference number: 4 (lower is better)
Translates to: ASRAKQETGSVTSPSSLLCSCAC*HHYLEL
Trigger: TAGCTCAAGGTAATGGTGTCAACAGGCACAAGAACA...CAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR TCA 90 bp CCTGTTGACACCATTACCTTGAGCTACCCGCCACCTGAGGGCTGTAGAGGAGGGGTAAATAATTGCTCATaGGTGGCTGGTGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: PVDTITLSYPPPEGCRGGVNNCS*VAGAGI
Trigger: AATGCCTGCACCAGCCACTCATGAGCAATTATTTAC...CCCTCCTCTACAGCCCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
CDS-3UTR GCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGCATCTCAATCAGCATaGCCCCACAATCCATGTACT +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARASQSA*PHNPCT
Trigger: AGTACATGGATTGTGGGGGCATGCTGATTGAGATGC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR GCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCATCCACCTTGCAGGTTaGTTTTCTTCCACATCACCA +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGIHLAG*FSSTSP
Trigger: TGGTGATGTGGAAGAAAAGCAACCTGCAAGGTGGAT...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTCCCGCAAGTTCACCTaGTGTCTGAGGTATAAAATC +
Preference number: 4 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGSRKFT*CLRYKI
Trigger: GATTTTATACCTCAGACACCAGGTGAACTTGCGGGA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCTCCCGCAAGTTCACCTaGTGTCTGAGGTATAAAATC +
Preference number: 4 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGSRKFT*CLRYKI
Trigger: GATTTTATACCTCAGACACCAGGTGAACTTGCGGGA...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGGGCACTCACCTTTCTaGAGCATCTTCCACCTCAGC +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGGHSPF*SIFHLS
Trigger: GCTGAGGTGGAAGATGCTCCAGAAAGGTGAGTGCCC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTAAAGCCTCCAACATGTaGGAAAGGGCAGAACATGGA +
Preference number: 4 (lower is better)
Translates to: QWGHITCHGMRLMGADARKASNM*ERAEHG
Trigger: TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTACACAGAGACACTTGTaGTTACAAACAGTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPTQRHL*LQTVGR
Trigger: CCTACCTACTGTTTGTAACCACAAGTGTCTCTGTGT...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGCTTCTCCTGCTCAGTaGTCTCTGGTCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: TQATLRYILLSPRVPSRTASPAQ*SLVHKV
Trigger: CACCTTGTGGACCAGAGACCACTGAGCAGGAGAAGC...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTTCACAGAGCAGCTTGTaGCTTGCATCCACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGSQSSL*LASTLQ
Trigger: CTGCAAGGTGGATGCAAGCCACAAGCTGCTCTGTGA...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGAATGGCTGCTGTGCATaGGTGTCACAAGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMNGCCA*VSQGHL
Trigger: AAGATGACCTTGTGACACTCATGCACAGCAGCCATT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACTGGCCTCCGAAAACTaGTCCACACACTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGLASEN*STHSRM
Trigger: CATTCTGGAGTGTGTGGAGCAGTTTTCGGAGGCCAG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGAGATCCTTTATTTCCTaGACCACACGCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMRSFIS*TTRTQA
Trigger: AGCCTGTGTGCGTGTGGTGCAGGAAATAAAGGATCT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGTGGATGTGTCCCCTCTaGGCATCTCATAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMWMCPL*ASHNSS
Trigger: AGAGGAATTATGAGATGCCCAGAGGGGACACATCCA...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGAATCATACCTTAGGCTaGATGTGTCCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TLRYILLSPRVPSRTETRNHTLG*MCPLWA
Trigger: TGCCCAGAGGGGACACATCCAGCCTAAGGTATGATT...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTCTGATGCACGTGCAATaGCTGCTGTGCATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: TQATLRYILLSPRVPSRTLMHVQ*LLCMSV
Trigger: GACACTCATGCACAGCAGCCATTGCACGTGCATCAG...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGTTCACCCTAAGACAGTaGGTGACTCTCTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: TLRYILLSPRVPSRTETRFTLRQ*VTLSHP
Trigger: AGGATGGGAGAGAGTCACCCACTGTCTTAGGGTGAA...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGTTCCAGGTCTGCTCTaGGGACTTCACCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGVPGLL*GLHPKT
Trigger: TGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAAC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp TTGCTCATGAGTGGCTGGTGCAGGCATTGCTGGTGTCTCACTCCATTCCATCATTTGCTCATGAGTGGCTaGTGCAGGCATTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LLMSGWCRHCWCLTPFHHLLMSG*CRHCWC
Trigger: ACACCAGCAATGCCTGCACCAGCCACTCATGAGCAA...ATGATGGAATGGAGTGAGACACCAGCAATGCCTGCACCAGCCACTCATGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CCA 90 bp AACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAATAATTGCTCATGAGTaGCTGGTGCAGGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: NWERDKSLLPSVSPVARIIIAHE*LVQALL
Trigger: CAGCAATGCCTGCACCAGCCACTCATGAGCAATTAT...TATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACAAGCAATAGGAGATTaGGAGGTGCTGTGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGQAIGD*EVLCEG
Trigger: CCCTTCACACAGCACCTCTCAATCTCCTATTGCTTG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp ATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCTGTTCTTGTGCCTGTTaGCACCATTACCTTGAGCTA +
Preference number: 4 (lower is better)
Translates to: IVCLSGKTGNWERDKSLLCSCAC*HHYLEL
Trigger: TAGCTCAAGGTAATGGTGTCAACAGGCACAAGAACA...GAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR TCA 90 bp AACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGTAAATAATTGCTCATaGGTGGCTGGTGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: NWERDKSLLPSVSPVARIVNNCS*VAGAGI
Trigger: AATGCCTGCACCAGCCACTCATGAGCAATTATTTAC...TATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAGTGCAATGGCTGCTGTaGATGAGTGTCACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGVQWLL*MSVTRS
Trigger: TGACCTTGTGACACTCATGCACAGCAGCCATTGCAC...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGATTTCACTGCTTCTCCTaGTCAGTGGTCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGFHCFS*SVVSGP
Trigger: TGGACCAGAGACCACTGAGCAGGAGAAGCAGTGAAA...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp TGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGACCATCATTGTTCTTGTaGCTGTTGACACCATTACCT +
Preference number: 4 (lower is better)
Translates to: WERDKSLLPSVSPVARIGPSLFL*LLTPLP
Trigger: AGGTAATGGTGTCAACAGGCACAAGAACAATGATGG...TCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAATAAAATCTCCTCCTTaGCTGAGCCCAGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGIKSPP*LSPAGL
Trigger: AAGCCCTGCTGGGCTCAGCCAAGGAGGAGATTTTAT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAACCCAATAAATATTTGTAAAATTCATGTCCAGGTGTaGAGGGCCCAAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PFCIPGGKNRRNPINICKIHVQV*RAQAAG
Trigger: GCCAGCGGCTTGGGCCCTTCACACCTGGACATGAAT...TTTACAAATATTTATTGGGTTCCTCCTATTCTTGCCACCGGGGATACAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAAATGGCTGCTGTGCATaGGTGTCACAAGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGNGCCA*VSQGHL
Trigger: AAGATGACCTTGTGACACTCATGCACAGCAGCCATT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR GCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTAGATCCTTTATTTCCTaGACCACACGCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: TQATLRYILLSPRVPSRTRSFIS*TTRTQA
Trigger: AGCCTGTGTGCGTGTGGTGCAGGAAATAAAGGATCT...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR GCA 90 bp ATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCATCATTGTTCTTGTaGCTGTTGACACCATTACCT +
Preference number: 4 (lower is better)
Translates to: IVCLSGKTGNWERDKSLLPSLFL*LLTPLP
Trigger: AGGTAATGGTGTCAACAGGCACAAGAACAATGATGG...GAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR GCA 90 bp CTTGTGCCTGTTGACACCATTACCTTGAGCTACCCGCCACCTGAGGGCTGTAGACCATCATTGTTCTTGTaGCTGTTGACACCATTACCT +
Preference number: 4 (lower is better)
Translates to: LVPVDTITLSYPPPEGCRPSLFL*LLTPLP
Trigger: AGGTAATGGTGTCAACAGGCACAAGAACAATGATGG...TCTACAGCCCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAACAGGCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACTTCCACATCACCACTaGGGACTTGAAGATAACAGG +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGLPHHH*GLEDNR
Trigger: CCTGTTATCTTCAAGTCCCCAGTGGTGATGTGGAAG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp TTTGCCAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACATGGTGCAGGCATTGCTaGTGTCTCACTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: FASLLSASRAKQETGSVTWCRHC*CLTPFH
Trigger: ATGGAATGGAGTGAGACACCAGCAATGCCTGCACCA...TGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR TCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAAGTTCACCTGGTGTCTaGGGTATAAAATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGSSPGV*GIKSPP
Trigger: AGGAGGAGATTTTATACCTCAGACACCAGGTGAACT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR TCA 90 bp CAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCGTAAATAATTGCTCATaGGTGGCTGGTGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: QFIVCLSGKTGNWERDKSVNNCS*VAGAGI
Trigger: AATGCCTGCACCAGCCACTCATGAGCAATTATTTAC...GGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CCA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAACTTTGACGTCTTCCTaGGTGATCTTTTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: VPEDVGKASNMWERAEHGTLTSS*VIFLTG
Trigger: GCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTACTTTGACGTCTTCCTaGGTGATCTTTTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: TQATLRYILLSPRVPSRTTLTSS*VIFLTG
Trigger: GCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGT...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp ACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTGAGACCCGGACACAGAGACACTTGTaGTTACAAACAGTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: TLRYILLSPRVPSRTETRTQRHL*LQTVGR
Trigger: CCTACCTACTGTTTGTAACCACAAGTGTCTCTGTGT...CCGGGTCTCAGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CCA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTTCACTTAACCTACTCTaGCCTGAGTTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: TQATLRYILLSPRVPSRTSLNLL*PEFLHP
Trigger: TGGATGGAGAAACTCAGGCCAGAGTAGGTTAAGTGA...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS CCA 90 bp CCCCTTGGATGGCCGAGAATGCGGACGGGCGCCGGGCTCCTGCCTTaGCTCCAGCCTCCGAGGCCGGGCGAGCTCCGGTGCGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: PLGWPRMRTGAGLLP*LQPPRPGELRCGLP
Trigger: CGGAAGCCCGCACCGGAGCTCGCCCGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAAGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp GACATCCCCTTGGATGGCCGAGAATGCGGACGGGCGCCGGGCTCCTaGCTTGGCTCCAGCCTCCGAGGCCGGGCGAGCTCCGGTGCGGGC +
Preference number: 5 (lower is better)
Translates to: DIPLDGRECGRAPGS*LGSSLRGRASSGAG
Trigger: GCCCGCACCGGAGCTCGCCCGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 90 bp GCGCTCAGGGCCGGACACCCCGGGTCGCCGGCCAACGTAGGCGGCTaGCGTCTTCCAGATGCCCGCTGCCTTTCCAGTCCCCCGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ALRAGHPGSPANVGG*RLPDARCLSSPPAS
Trigger: ACTGGCCGGGGGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGCCGGCGACCCGGGGTGTCCGGCCCTGAGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp GGGTCGCCGGCCAACGTAGGCGGCTGGCGTCTTCCAGATGCCCGCTaGCTTTCCAGTCCCCCGGCCAGTGGCCCGGGAACCAAACGGCCC +
Preference number: 5 (lower is better)
Translates to: GSPANVGGWRLPDAR*LSSPPASGPGTKRP
Trigger: GGGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGCCGGCGACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp GGGCTCCTGCCTTGGCTCCAGCCTCCGAGGCCGGGCGAGCTCCGGTaGGGGCTTCCGAGAGGAACTGGGATCCAGAGGTGGCTCGGGATC +
Preference number: 5 (lower is better)
Translates to: GLLPWLQPPRPGELR*GLPRGTGIQRWLGI
Trigger: GATCCCGAGCCACCTCTGGATCCCAGTTCCTCTCGGAAGCCCGCACCGGAGCTCGCCCGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp ACACCCCGGGTCGCCGGCCAACGTAGGCGGCTGGCGTCTTCCAGATaGCCGCTGCCTTTCCAGTCCCCCGGCCAGTGGCCCGGGAACCAA +
Preference number: 5 (lower is better)
Translates to: TPRVAGQRRRLASSR*PLPFQSPGQWPGNQ
Trigger: TTGGTTCCCGGGCCACTGGCCGGGGGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGCCGGCGACCCGGGGTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp GGAACTGGGATCCAGAGGTGGCTCGGGATCCTACTCTCTGTCCAGTaGCCCGTGCCTGCGGCTGCGCAGAGGGCTCCGGAGCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: GTGIQRWLGILLSVQ*PVPAAAQRAPERDW
Trigger: CCAGTCCCGCTCCGGAGCCCTCTGCGCAGCCGCAGGCACGGGGCACTGGACAGAGAGTAGGATCCCGAGCCACCTCTGGATCCCAGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 90 bp GCCTCCGAGGCCGGGCGAGCTCCGGTGCGGGCTTCCGAGAGGAACTaGGATCCAGAGGTGGCTCGGGATCCTACTCTCTGTCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: ASEAGRAPVRASERN*DPEVARDPTLCPVP
Trigger: GGGCACTGGACAGAGAGTAGGATCCCGAGCCACCTCTGGATCCCAGTTCCTCTCGGAAGCCCGCACCGGAGCTCGCCCGGCCTCGGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp CGAATTGTCGGGCATAGACCGGACATCCCCTTGGATGGCCGAGAATaGGGACGGGCGCCGGGCTCCTGCCTTGGCTCCAGCCTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: RIVGHRPDIPLDGRE*GRAPGSCLGSSLRG
Trigger: GCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCTATGCCCGACAATTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 90 bp GGCGAGCTCCGGTGCGGGCTTCCGAGAGGAACTGGGATCCAGAGGTaGCTCGGGATCCTACTCTCTGTCCAGTGCCCCGTGCCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: GELRCGLPRGTGIQR*LGILLSVQCPVPAA
Trigger: AGCCGCAGGCACGGGGCACTGGACAGAGAGTAGGATCCCGAGCCACCTCTGGATCCCAGTTCCTCTCGGAAGCCCGCACCGGAGCTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 90 bp GTCCACGGCGCGTCCGAATTGTCGGGCATAGACCGGACATCCCCTTaGATGGCCGAGAATGCGGACGGGCGCCGGGCTCCTGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: VHGASELSGIDRTSP*MAENADGRRAPALA
Trigger: AGCCAAGGCAGGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCTATGCCCGACAATTCGGACGCGCCGTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGACGACGATCTGCAGCTaGTCCGGCTGGCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLTTICS*SGWRQG
Trigger: TCCCTGCCGCCAGCCGGACAAGCTGCAGATCGTCGT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 90 bp CTGGCGTCTTCCAGATGCCCGCTGCCTTTCCAGTCCCCCGGCCAGTaGCCCGGGAACCAAACGGCCCTTGGAATACGAAGCGGGTCCACG +
Preference number: 5 (lower is better)
Translates to: LASSRCPLPFQSPGQ*PGNQTALGIRSGST
Trigger: CGTGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCACGGCGCGTCCGAATaGTCGGGCATAGACCGGACA +
Preference number: 5 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLHGASE*SGIDRT
Trigger: TGTCCGGTCTATGCCCGACAATTCGGACGCGCCGTG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGACGACGATCTGCAGCTaGTCCGGCTGGCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQTTICS*SGWRQG
Trigger: TCCCTGCCGCCAGCCGGACAAGCTGCAGATCGTCGT...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 90 bp GCCTTTCCAGTCCCCCGGCCAGTGGCCCGGGAACCAAACGGCCCTTaGAATACGAAGCGGGTCCACGGCGCGTCCGAATTGTCGGGCATA +
Preference number: 5 (lower is better)
Translates to: AFPVPRPVAREPNGP*NTKRVHGASELSGI
Trigger: TATGCCCGACAATTCGGACGCGCCGTGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACTGGAAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGAGACCGGACATCCCCTaGGATGGCCGAGAATGCGGA +
Preference number: 5 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLRPDIP*DGRECG
Trigger: TCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCT...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGCCACTGCTGCAGAGTaGGAGAGCCTGGGGGATAGA +
Preference number: 5 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLATAAE*ESLGDR
Trigger: TCTATCCCCCAGGCTCTCCAACTCTGCAGCAGTGGC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGGGGGTGAGGGGCACATaGTTGGGAAGGCGCTCACAA +
Preference number: 5 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLGVRGT*LGRRSQ
Trigger: TTGTGAGCGCCTTCCCAACAATGTGCCCCTCACCCC...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGAGACCGGACATCCCCTaGGATGGCCGAGAATGCGGA +
Preference number: 5 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLRPDIP*DGRECG
Trigger: TCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCT...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCAGCTCAGCCATCTGTaGGCTGGCCTCCGAAAACTG +
Preference number: 5 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQQLSHL*AGLRKL
Trigger: CAGTTTTCGGAGGCCAGCCAACAGATGGCTGAGCTG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCCACGTTCATCCGCGTaGCCTCATCCAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQPRSSA*PHPAPV
Trigger: AACTGGAGCTGGATGAGGCAACGCGGATGAACGTGG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCTGGGCATCTTGCCAGTaGGCCAGCTGCTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFWASCQ*ASCWRT
Trigger: TGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCA...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQPVMGI*PVGQLL
Trigger: CAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGTGAGGGGCACATTGTaGGGAAGGCGCTCACAACTC +
Preference number: 5 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQVRGTL*GRRSQL
Trigger: GAGTTGTGAGCGCCTTCCCAACAATGTGCCCCTCAC...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCGGGGTGAGGGGCACATaGTTGGGAAGGCGCTCACAA +
Preference number: 5 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFGVRGT*LGRRSQ
Trigger: TTGTGAGCGCCTTCCCAACAATGTGCCCCTCACCCC...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGCCCAGCCCCCAGCTATaGAGGAACAAAGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQPSPQL*RNKGVG
Trigger: TCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGG...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS TCA 90 bp GCAGCCGAGCGACCTCCTGCTGCTGCCGTTCATAGTTTTCCAGCCTaGGCACCAGCACCTCCGACAGCTCAGCCATCTGTTGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: AAERPPAAAVHSFPA*APAPPTAQPSVGWP
Trigger: AGGCCAGCCAACAGATGGCTGAGCTGTCGGAGGTGCTGGTGCTCAGGCTGGAAAACTATGAACGGCAGCAGCAGGAGGTCGCTCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTATAAAATCTCCTCCTaGGCTGAGCCCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLYKISS*AEPSRA
Trigger: AGCCCTGCTGGGCTCAGCCAAGGAGGAGATTTTATA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGCTCAAGAGTGTCGAGTaGAGAGGCCTCTTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLLKSVE*RGLFSQ
Trigger: CTGAGAGAAGAGGCCTCTCAACTCGACACTCTTGAG...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTGGGCATCTTGCCAGTaGGCCAGCTGCTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSWASCQ*ASCWRT
Trigger: TGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGCCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLPVMGI*PVGQLL
Trigger: CAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGG...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTTGGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGTTCCAACTGTGGCCCTaGCTGGTGAAGGCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: AWPGSRRRGLKLSVGPLQFQLWP*LVKAFV
Trigger: GACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAA...CTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCTGGCAGCCACAGCTTTaGCACCAGCTGCAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSWQPQL*HQLQSE
Trigger: CTCGCTCTGCAGCTGGTGCAAAAGCTGTGGCTGCCA...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGGGGTGAGGGGCACATaGTTGGGAAGGCGCTCACAA +
Preference number: 5 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLGVRGT*LGRRSQ
Trigger: TTGTGAGCGCCTTCCCAACAATGTGCCCCTCACCCC...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGATTGGCCAGCTGCTTCTaGGCAGCCCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GNWERDKSLLPSVSPVARLASCF*AAPSSS
Trigger: GGAGGAGCTGGGGGCTGCCAAGAAGCAGCTGGCCAA...TCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442364.1
CDS-3UTR CAA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGGAACCAAACGGCCCTaGGAATACGAAGCGGGTCCA +
Preference number: 5 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSGTKRP*EYEAGP
Trigger: TGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTCC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GGCCAGGCAGCAGAAGGAGGGGCCTCAAGCTGTCTGTGGGGCCTCTGCAGGCTGTCCTGGGTGATCTTTTaGACTGGCGGAGGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: GQAAEGGASSCLWGLCRLSWVIF*TGGGRL
Trigger: TAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGA...CAGCCTGCAGAGGCCCCACAGACAGCTTGAGGCCCCTCCTTCTGCTGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCCACGTTCATCCGCGTaGCCTCATCCAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSPRSSA*PHPAPV
Trigger: AACTGGAGCTGGATGAGGCAACGCGGATGAACGTGG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTGGGCATCTTGCCAGTaGGCCAGCTGCTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPWASCQ*ASCWRT
Trigger: TGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTACGACGATCTGCAGCTaGTCCGGCTGGCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: QWGHITCHGMRLMGADARTTICS*SGWRQG
Trigger: TCCCTGCCGCCAGCCGGACAAGCTGCAGATCGTCGT...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTTGGCAGCCACAGCTTTaGCACCAGCTGCAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPWQPQL*HQLQSE
Trigger: CTCGCTCTGCAGCTGGTGCAAAAGCTGTGGCTGCCA...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCCCAGCCCCCAGCTATaGAGGAACAAAGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSPSPQL*RNKGVG
Trigger: TCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp GTTGCTGGCGGAGGGTCTTCACCTCCTCCTGCATCTCAATCAGCATaGCCCCACAATCCATGTACTTCTCCCGCAGGTCCTGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: VAGGGSSPPPASQSA*PHNPCTSPAGPAAG
Trigger: CCCAGCTGCAGGACCTGCGGGAGAAGTACATGGATTGTGGGGGCATGCTGATTGAGATGCAGGAGGAGGTGAAGACCCTCCGCCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS CCA 90 bp GGAAACCAGGAAGAGTCTCCAGAGGCACGCTGTATGGGTAATGGGTaGCAGACCCAGTGGACACTGGGGGTTGCTGGCGGAGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GNQEESPEARCMGNG*QTQWTLGVAGGGSS
Trigger: TGAAGACCCTCCGCCAGCAACCCCCAGTGTCCACTGGGTCTGCCACCCATTACCCATACAGCGTGCCTCTGGAGACTCTTCCTGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR CAA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCAGACCGGACATCCCCTaGGATGGCCGAGAATGCGGA +
Preference number: 5 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGRPDIP*DGRECG
Trigger: TCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCT...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCAGACCGGACATCCCCTaGGATGGCCGAGAATGCGGA +
Preference number: 5 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTRPDIP*DGRECG
Trigger: TCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGGAACCAAACGGCCCTaGGAATACGAAGCGGGTCCA +
Preference number: 5 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPGTKRP*EYEAGP
Trigger: TGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTCC...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCCACGTTCATCCGCGTaGCCTCATCCAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPPRSSA*PHPAPV
Trigger: AACTGGAGCTGGATGAGGCAACGCGGATGAACGTGG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPPVMGI*PVGQLL
Trigger: CAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCGCCACTGCTGCAGAGTaGGAGAGCCTGGGGGATAGA +
Preference number: 5 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGATAAE*ESLGDR
Trigger: TCTATCCCCCAGGCTCTCCAACTCTGCAGCAGTGGC...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTGGCAGCCACAGCTTTaGCACCAGCTGCAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTWQPQL*HQLQSE
Trigger: CTCGCTCTGCAGCTGGTGCAAAAGCTGTGGCTGCCA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCTGGCAGCCACAGCTTTaGCACCAGCTGCAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGWQPQL*HQLQSE
Trigger: CTCGCTCTGCAGCTGGTGCAAAAGCTGTGGCTGCCA...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTCCCAGCCCCCAGCTATaGAGGAACAAAGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: SEGAAPRLWGFWLGRGDPPSPQL*RNKGVG
Trigger: TCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGG...AGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp AGCAGCCTCAGCTTCTCCTGCAAGGCTTCCAGCTGTGGGCAGTGGTaGTGGTGCAGCAATGCCTCCTGCGAAATCAGCTTAGGGGCATCA +
Preference number: 5 (lower is better)
Translates to: SSLSFSCKASSCGQW*WCSNASCEISLGAS
Trigger: TGATGCCCCTAAGCTGATTTCGCAGGAGGCATTGCTGCACCAGCACCACTGCCCACAGCTGGAAGCCTTGCAGGAGAAGCTGAGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 90 bp GCTGGAGGACATAATTCATGTCCAGGTGTGAAGGGCCCAAGCCGCTaGCCTCCAGGGCTGATGTCACCACGTTCATCCGCGTTGCCTCAT +
Preference number: 5 (lower is better)
Translates to: AGGHNSCPGVKGPSR*PPGLMSPRSSALPH
Trigger: ATGAGGCAACGCGGATGAACGTGGTGACATCAGCCCTGGAGGCCAGCGGCTTGGGCCCTTCACACCTGGACATGAATTATGTCCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
ENST00000458656.5
CDS-3UTR CAA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCGGAACCAAACGGCCCTaGGAATACGAAGCGGGTCCA +
Preference number: 5 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGGTKRP*EYEAGP
Trigger: TGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTCC...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAGGGAGGGGTCCCCAAGCTCCAGCCCAGGTTCATGAACACAGAGGGTGGGCTGTCCTGGGTGATCTTTTaGACTGGCGGAGGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: QGGVPKLQPRFMNTEGGLSWVIF*TGGGRL
Trigger: TAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGA...CAGCCCACCCTCTGTGTTCATGAACCTGGGCTGGAGCTTGGGGACCCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCCAGCTCAGCCATCTGTaGGCTGGCCTCCGAAAACTG +
Preference number: 5 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTQLSHL*AGLRKL
Trigger: CAGTTTTCGGAGGCCAGCCAACAGATGGCTGAGCTG...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGPVMGI*PVGQLL
Trigger: CAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCGTGAGGGGCACATTGTaGGGAAGGCGCTCACAACTC +
Preference number: 5 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGVRGTL*GRRSQL
Trigger: GAGTTGTGAGCGCCTTCCCAACAATGTGCCCCTCAC...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAACGACGATCTGCAGCTaGTCCGGCTGGCGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: VPEDVGKASNMWERAEHGTTICS*SGWRQG
Trigger: TCCCTGCCGCCAGCCGGACAAGCTGCAGATCGTCGT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGGCCACTGCTGCAGAGTaGGAGAGCCTGGGGGATAGA +
Preference number: 5 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMATAAE*ESLGDR
Trigger: TCTATCCCCCAGGCTCTCCAACTCTGCAGCAGTGGC...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTTCCAACTGTGGCCCTaGCTGGTGAAGGCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTFQLWP*LVKAFV
Trigger: GACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCCTGTCCCTGAAGACGTaGGAAAAGCCTCCAACATGT +
Preference number: 5 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSLSLKT*EKPPTC
Trigger: ACATGTTGGAGGCTTTTCCAACGTCTTCAGGGACAG...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTGTGAGGGGCACATTGTaGGGAAGGCGCTCACAACTC +
Preference number: 5 (lower is better)
Translates to: QWGHITCHGMRLMGADARVRGTL*GRRSQL
Trigger: GAGTTGTGAGCGCCTTCCCAACAATGTGCCCCTCAC...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CGGCTCCTTAAAGAGGCAGGGCTCACATGGCCTGCACTCGGAAGGTGCAGCTCCGGAGGGCGACTATACTaGTTCCTAAACCCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: RLLKEAGLTWPALGRCSSGGRLY*FLNPVP
Trigger: TGGAACAGGGTTTAGGAACAAGTATAGTCGCCCTCC...GGAGCTGCACCTTCCGAGTGCAGGCCATGTGAGCCCTGCCTCTTTAAGGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CAA 90 bp CGGAAGGTGCAGCTCCCAGACTTTGGGGTTTCTGGCTGGGGAGAGGAGACCCTGTGGCTTGCATCCACCTaGCAGGTTGCTTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RKVQLPDFGVSGWGEETLWLAST*QVAFLP
Trigger: TGGAAGAAAAGCAACCTGCAAGGTGGATGCAAGCCA...CAGGGTCTCCTCTCCCCAGCCAGAAACCCCAAAGTCTGGGAGCTGCACCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CAA 90 bp TCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTTGGGCATCTTGCCAGTaGGCCAGCTGCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SASRAKQETGSVTSPSSLWASCQ*ASCFLA
Trigger: TGCCAAGAAGCAGCTGGCCAACTGGCAAGATGCCCA...AAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442364.1
CDS GCA 90 bp TCCTGGAGCTGCATCTGGATTTCCTTCTCCGAAGCCAGCTGCTTCTaGAACTTTTCAGTCTCAGCCCCATACATCCGGCAGCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SWSCIWISFSEASCF*NFSVSAPYIRQRCC
Trigger: GCAGCAGCGCTGCCGGATGTATGGGGCTGAGACTGAAAAGTTGCAGAAGCAGCTGGCTTCGGAGAAGGAAATCCAGATGCAGCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310778.5
ENST00000347901.9
CDS CCA 90 bp GCATCTTCCACCTCAGCTGCCGCCTGTAATGGGCATCTTGCCAGTTaGCCAGCTGCTGGAGGACATAATTCATGTCCAGGTGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: ASSTSAAACNGHLAS*PAAGGHNSCPGVKG
Trigger: GCCCTTCACACCTGGACATGAATTATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGGCGGCAGCTGAGGTGGAAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
ENST00000458656.5
CDS-3UTR CAA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTATAAAATCTCCTCCTaGGCTGAGCCCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGYKISS*AEPSRA
Trigger: AGCCCTGCTGGGCTCAGCCAAGGAGGAGATTTTATA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCTATAAAATCTCCTCCTaGGCTGAGCCCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGYKISS*AEPSRA
Trigger: AGCCCTGCTGGGCTCAGCCAAGGAGGAGATTTTATA...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCCTCAAGAGTGTCGAGTaGAGAGGCCTCTTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGLKSVE*RGLFSQ
Trigger: CTGAGAGAAGAGGCCTCTCAACTCGACACTCTTGAG...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCTCAAGAGTGTCGAGTaGAGAGGCCTCTTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGLKSVE*RGLFSQ
Trigger: CTGAGAGAAGAGGCCTCTCAACTCGACACTCTTGAG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGCAGCTCAGCCATCTGTaGGCTGGCCTCCGAAAACTG +
Preference number: 5 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMQLSHL*AGLRKL
Trigger: CAGTTTTCGGAGGCCAGCCAACAGATGGCTGAGCTG...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAAGTGGACACTGGGGGTaGCTGGCGGAGGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: VPEDVGKASNMWERAEHGSGHWG*LAEGLH
Trigger: GTGAAGACCCTCCGCCAGCAACCCCCAGTGTCCACT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS GCA 90 bp TCTCCTCCATCAAAACACTGTTCTGTTTCACCAGGGACTGGCCGATaGGAGCTGCAGTGTTCAGGTCCCTCTCTCTCTGCAGGACCATCC +
Preference number: 5 (lower is better)
Translates to: SPPSKHCSVSPGTGR*ELQCSGPSLSAGPS
Trigger: GGATGGTCCTGCAGAGAGAGAGGGACCTGAACACTGCAGCTCGCATCGGCCAGTCCCTGGTGAAACAGAACAGTGTTTTGATGGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 90 bp CTCTCTTCCTGGAGCTGCATCTGGATTTCCTTCTCCGAAGCCAGCTaGTTCTGCAACTTTTCAGTCTCAGCCCCATACATCCGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: LSSWSCIWISFSEAS*FCNFSVSAPYIRQR
Trigger: GCGCTGCCGGATGTATGGGGCTGAGACTGAAAAGTTGCAGAAGCAGCTGGCTTCGGAGAAGGAAATCCAGATGCAGCTCCAGGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS-3UTR CAA 90 bp GCTGCTGGGGAACAGCAAAGCCTGGAAGAGAAGCAGGTGGATGTGAACTGGGGCTCCTGGGTGATCTTTTaGACTGGCGGAGGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: AAGEQQSLEEKQVDVNWGSWVIF*TGGGRL
Trigger: TAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGA...GCCCCAGTTCACATCCACCTGCTTCTCTTCCAGGCTTTGCTGTTCCCCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCTCCTGGGTGATCTTTTaGACTGGCGGAGGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTSWVIF*TGGGRL
Trigger: TAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGA...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCTCAAGAGTGTCGAGTaGAGAGGCCTCTTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: QWGHITCHGMRLMGADARLKSVE*RGLFSQ
Trigger: CTGAGAGAAGAGGCCTCTCAACTCGACACTCTTGAG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTTGGGCATCTTGCCAGTaGGCCAGCTGCTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: TQATLRYILLSPRVPSRTWASCQ*ASCWRT
Trigger: TGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCA...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CAA 90 bp AGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTGGGCATCTTGCCAGTaGGCCAGCTGCTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: SLLSASRAKQETGSVTSPWASCQ*ASCWRT
Trigger: TGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCA...GGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR CAA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCTGTCCCTGAAGACGTaGGAAAAGCCTCCAACATGT +
Preference number: 5 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGLSLKT*EKPPTC
Trigger: ACATGTTGGAGGCTTTTCCAACGTCTTCAGGGACAG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGAATGGAGTCTCGCTGTaGTTGCCCAGACTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMNGVSL*LPRLEC
Trigger: GCACTCCAGTCTGGGCAACAACAGCGAGACTCCATT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CAA 90 bp CCCACAACCCTGCAGGAGGCCCTAGCCCACCTTCTGACACCCAGGGGACTGTTCAAATATAACATCACTTaGACGTCTTCCTGGGTGATC +
Preference number: 5 (lower is better)
Translates to: PTTLQEALAHLLTPRGLFKYNIT*TSSWVI
Trigger: GATCACCCAGGAAGACGTCAAAGTGATGTTATATTT...GAACAGTCCCCTGGGTGTCAGAAGGTGGGCTAGGGCCTCCTGCAGGGTTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp ACCCAGGCTACTCTGAGATATATTCTACTGTCCCCCAGAGTTCCCAGCAGGACTCCACGTTCATCCGCGTaGCCTCATCCAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: TQATLRYILLSPRVPSRTPRSSA*PHPAPV
Trigger: AACTGGAGCTGGATGAGGCAACGCGGATGAACGTGG...AGTCCTGCTGGGAACTCTGGGGGACAGTAGAATATATCTCAGAGTAGCCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CAA 90 bp AGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCCCACGTTCATCCGCGTaGCCTCATCCAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SLLSASRAKQETGSVTSPPRSSA*PHPAPV
Trigger: AACTGGAGCTGGATGAGGCAACGCGGATGAACGTGG...GGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR CAA 90 bp ACTGTTCCAACTGTGGCCCTTGCTGGTGAAGGCCTTTGTCCCCATAGCCTGGGCCACGGAAAGTCGCCATaGATAATTATGCAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: TVPTVALAGEGLCPHSLGHGKSP*IIMQVA
Trigger: GGCAACCTGCATAATTATCAATGGCGACTTTCCGTG...GCCCAGGCTATGGGGACAAAGGCCTTCACCAGCAAGGGCCACAGTTGGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACCCAGCCCCCAGCTATaGAGGAACAAAGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: VPEDVGKASNMWERAEHGPSPQL*RNKGVG
Trigger: TCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTGGTTCACAGAGCAGCTaGTGGCTTGCATCCACCTTG +
Preference number: 5 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGGSQSS*WLASTL
Trigger: CAAGGTGGATGCAAGCCACAAGCTGCTCTGTGAACC...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS TCA 90 bp CCATCTGTTGGCTGGCCTCCGAAAACTGCTCCACACACTCCAGAATaGGCATCTGTTCCTCATCCTCAAGAGTGTCGAGTTGAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PSVGWPPKTAPHTPE*ASVPHPQECRVERP
Trigger: AGGCCTCTCAACTCGACACTCTTGAGGATGAGGAACAGATGCTCATTCTGGAGTGTGTGGAGCAGTTTTCGGAGGCCAGCCAACAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAATGGGGACACATCACCTGCCACGGAATGAGGCTGATGGGAGCTGATGCACGTCACGGAAAGTCGCCATaGATAATTATGCAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: QWGHITCHGMRLMGADARHGKSP*IIMQVA
Trigger: GGCAACCTGCATAATTATCAATGGCGACTTTCCGTG...ACGTGCATCAGCTCCCATCAGCCTCATTCCGTGGCAGGTGATGTGTCCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAATCACCACTGGGGACTaGAAGATAACAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VPEDVGKASNMWERAEHGITTGD*KITGAG
Trigger: CCCTGCCCCTGTTATCTTCAAGTCCCCAGTGGTGAT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS GCA 90 bp CAGCTTAGGGGCATCACAGGGATGAGCACACTGCAGGTCTTCCTCTaGTTCTTCTTCTTCCTGTTCCTCTTCTGCCTCCTTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: QLRGITGMSTLQVFL*FFFFLFLFCLLFFL
Trigger: GAGGAAGAAAAGGAGGCAGAAGAGGAACAGGAAGAAGAAGAAGCAGAGGAAGACCTGCAGTGTGCTCATCCCTGTGATGCCCCTAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp TTCCTAAACCCTGTTCCAGGTCTGCTCTGGGGACTTCACCCTAAGACAGTGGGTCTGTCCCTGAAGACGTaGGAAAAGCCTCCAACATGT +
Preference number: 5 (lower is better)
Translates to: FLNPVPGLLWGLHPKTVGLSLKT*EKPPTC
Trigger: ACATGTTGGAGGCTTTTCCAACGTCTTCAGGGACAG...ACCCACTGTCTTAGGGTGAAGTCCCCAGAGCAGACCTGGAACAGGGTTTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393939.6
CDS-3UTR CAA 90 bp TTTGCCAGTTTATTGTCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACACCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: FASLLSASRAKQETGSVTPVMGI*PVGQLL
Trigger: AAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGG...TGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGACAATAAACTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442364.1
CDS-3UTR CAA 90 bp TCTGCCTCTCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCACTCCATTCCATCATaGTTCTTGTGCCTGTTGACA +
Preference number: 5 (lower is better)
Translates to: SASRAKQETGSVTSPSSLHSIPS*FLCLLT
Trigger: TGTCAACAGGCACAAGAACAATGATGGAATGGAGTG...AAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGAGAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CAA 90 bp TCTACCCCGGCTGTGTGGCCCCAAACAAGTGTCCTTAGCTCTCTGAGCCTCACCAAATATAACATCACTTaGACGTCTTCCTGGGTGATC +
Preference number: 5 (lower is better)
Translates to: STPAVWPQTSVLSSLSLTKYNIT*TSSWVI
Trigger: GATCACCCAGGAAGACGTCAAAGTGATGTTATATTT...GGTGAGGCTCAGAGAGCTAAGGACACTTGTTTGGGGCCACACAGCCGGGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAACCCAATAAATATTTGTCCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PPFCIPGGKNRRNPINICPVMGI*PVGQLL
Trigger: CAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGG...ACAAATATTTATTGGGTTCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458656.5
CDS-3UTR CAA 90 bp ACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAATTCCATCATTGTTCTaGTGCCTGTTGACACCATTA +
Preference number: 5 (lower is better)
Translates to: TGNWERDKSLLPSVSPVAIPSLF*CLLTPL
Trigger: TAATGGTGTCAACAGGCACAAGAACAATGATGGAAT...TGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CAA 90 bp CCTGTTGACACCATTACCTTGAGCTACCCGCCACCTGAGGGCTGTAGAGGAGGGATTCCATCATTGTTCTaGTGCCTGTTGACACCATTA +
Preference number: 5 (lower is better)
Translates to: PVDTITLSYPPPEGCRGGIPSLF*CLLTPL
Trigger: TAATGGTGTCAACAGGCACAAGAACAATGATGGAAT...CCCTCCTCTACAGCCCTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442364.1
ENST00000458656.5
CDS-3UTR CAA 90 bp GACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAACCCAATTGTTTGCCAGTTTATaGTCTGCCTCTCGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: DKSLLPSVSPVARIGGTQLFASL*SASRAK
Trigger: TTTTGCCCGAGAGGCAGACAATAAACTGGCAAACAA...TTGGGTTCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CAA 90 bp TCGGGCAAAACAGGAAACTGGGAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCTTGTTTGCCAGTTTATaGTCTGCCTCTCGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: SGKTGNWERDKSLLPSVSLFASL*SASRAK
Trigger: TTTTGCCCGAGAGGCAGACAATAAACTGGCAAACAA...GGATACAGAAGGGAGGAGGGACTTGTCACGCTCCCAGTTTCCTGTTTTGCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CAA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGACACGGAAAGTCGCCATaGATAATTATGCAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: VPEDVGKASNMWERAEHGHGKSP*IIMQVA
Trigger: GGCAACCTGCATAATTATCAATGGCGACTTTCCGTG...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp GAGCGTGACAAGTCCCTCCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAATTCCATCATTGTTCTaGTGCCTGTTGACACCATTA +
Preference number: 5 (lower is better)
Translates to: ERDKSLLPSVSPVARIGGIPSLF*CLLTPL
Trigger: TAATGGTGTCAACAGGCACAAGAACAATGATGGAAT...TCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGGAGGGACTTGTCACGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS CCA 90 bp GGGAGAAGCTCCTCCAGCAAATATAACATCACTTTGACGTCTTCCTaGGTGATCTTTTTGACTGGCGGAGGTAGGTTAGGACACAGTGCT +
Preference number: 5 (lower is better)
Translates to: GRSSSSKYNITLTSS*VIFLTGGGRLGHSA
Trigger: AGCACTGTGTCCTAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATATTTGCTGGAGGAGCTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310778.5
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CAGTCCCAGCCCCCAGCTATTGAGGAACAAAGGTGTGGGAAAGGGCAGAACATGAAATATAACATCACTTaGACGTCTTCCTGGGTGATC +
Preference number: 5 (lower is better)
Translates to: QSQPPAIEEQRCGKGQNMKYNIT*TSSWVI
Trigger: GATCACCCAGGAAGACGTCAAAGTGATGTTATATTT...CATGTTCTGCCCTTTCCCACACCTTTGTTCCTCAATAGCTGGGGGCTGGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 90 bp GTACACACCTCCTCCAGCAAATATAACATCACTTTGACGTCTTCCTaGGTGATCTTTTTGACTGGCGGAGGTAGGTTAGGACACAGTGCT +
Preference number: 5 (lower is better)
Translates to: VHTSSSKYNITLTSS*VIFLTGGGRLGHSA
Trigger: AGCACTGTGTCCTAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATATTTGCTGGAGGAGGTGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341193.9
CDS-3UTR CAA 90 bp CCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAACCCAATAAATATTTGTAAAGTTGACACCATTACCTaGAGCTACCCGCCACCTGAG +
Preference number: 5 (lower is better)
Translates to: PFCIPGGKNRRNPINICKVDTIT*SYPPPE
Trigger: CTCAGGTGGCGGGTAGCTCAAGGTAATGGTGTCAAC...TTTACAAATATTTATTGGGTTCCTCCTATTCTTGCCACCGGGGATACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS-3UTR CAA 90 bp GTCCCTGAAGACGTTGGAAAAGCCTCCAACATGTGGGAAAGGGCAGAACATGGAAAATATAACATCACTTaGACGTCTTCCTGGGTGATC +
Preference number: 5 (lower is better)
Translates to: VPEDVGKASNMWERAEHGKYNIT*TSSWVI
Trigger: GATCACCCAGGAAGACGTCAAAGTGATGTTATATTT...TCCATGTTCTGCCCTTTCCCACATGTTGGAGGCTTTTCCAACGTCTTCAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS-3UTR CAA 90 bp CCTCCCTTCTGTATCCCCGGTGGCAAGAATAGGAGGAACCCAATAAATATTTGTCACTCCATTCCATCATaGTTCTTGTGCCTGTTGACA +
Preference number: 5 (lower is better)
Translates to: PPFCIPGGKNRRNPINICHSIPS*FLCLLT
Trigger: TGTCAACAGGCACAAGAACAATGATGGAATGGAGTG...ACAAATATTTATTGGGTTCCTCCTATTCTTGCCACCGGGGATACAGAAGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442364.1
ENST00000455021.5
ENST00000458656.5
CDS CCA 72 bp TGGCCGAGAATGCGGACGGGCGCCGGGCTCCTGCCTTaGCTCCAGCCTCCGAGGCCGGGCGAGCTCCGGTGC +
Preference number: 6 (lower is better)
Translates to: WPRMRTGAGLLP*LQPPRPGELRC
Trigger: GCACCGGAGCTCGCCCGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGCGCCCGTCCGCATTCTCGGCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS TCA 72 bp CCGGAGCGGGACTGGCTGAGGGCGAAGGTGCACAGGTaGGTGCTGCTGGGTCCCCGGGTCCGAGCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: PERDWLRAKVHR*VLLGPRVRAGS
Trigger: GGAGCCGGCTCGGACCCGGGGACCCAGCAGCACTCACCTGTGCACCTTCGCCCTCAGCCAGTCCCGCTCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 72 bp TTGGATGGCCGAGAATGCGGACGGGCGCCGGGCTCCTaGCTTGGCTCCAGCCTCCGAGGCCGGGCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: LDGRECGRAPGS*LGSSLRGRASS
Trigger: GGAGCTCGCCCGGCCTCGGAGGCTGGAGCCAAGGCAGGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 72 bp GTCGCCGGCCAACGTAGGCGGCTGGCGTCTTCCAGATaGCCGCTGCCTTTCCAGTCCCCCGGCCAGTGGCCC +
Preference number: 6 (lower is better)
Translates to: VAGQRRRLASSR*PLPFQSPGQWP
Trigger: GGGCCACTGGCCGGGGGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGCCGGCGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp GCCGGACACCCCGGGTCGCCGGCCAACGTAGGCGGCTaGCGTCTTCCAGATGCCCGCTGCCTTTCCAGTCCC +
Preference number: 6 (lower is better)
Translates to: AGHPGSPANVGG*RLPDARCLSSP
Trigger: GGGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGCCGGCGACCCGGGGTGTCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 72 bp CCTTGGCTCCAGCCTCCGAGGCCGGGCGAGCTCCGGTaGGGGCTTCCGAGAGGAACTGGGATCCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PWLQPPRPGELR*GLPRGTGIQRW
Trigger: CCACCTCTGGATCCCAGTTCCTCTCGGAAGCCCGCACCGGAGCTCGCCCGGCCTCGGAGGCTGGAGCCAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 72 bp GCCAACGTAGGCGGCTGGCGTCTTCCAGATGCCCGCTaGCTTTCCAGTCCCCCGGCCAGTGGCCCGGGAACC +
Preference number: 6 (lower is better)
Translates to: ANVGGWRLPDAR*LSSPPASGPGT
Trigger: GGTTCCCGGGCCACTGGCCGGGGGACTGGAAAGGCAGCGGGCATCTGGAAGACGCCAGCCGCCTACGTTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 90 bp GGTCCACGGCGCGTCCGAATTGTCGGGCATAGACCGGACATCCCCTaGGATGGCCGAGAATGCGGACGGGCGCCGGGCTCCTGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: GPRRVRIVGHRPDIP*DGRECGRAPGSCLG
Trigger: GCCAAGGCAGGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCTATGCCCGACAATTCGGACGCGCCGTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 72 bp GGGCATAGACCGGACATCCCCTTGGATGGCCGAGAATaGGGACGGGCGCCGGGCTCCTGCCTTGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GHRPDIPLDGRE*GRAPGSCLGSS
Trigger: GCTGGAGCCAAGGCAGGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCTATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 72 bp ATCCAGAGGTGGCTCGGGATCCTACTCTCTGTCCAGTaGCCCGTGCCTGCGGCTGCGCAGAGGGCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: IQRWLGILLSVQ*PVPAAAQRAPE
Trigger: CTCCGGAGCCCTCTGCGCAGCCGCAGGCACGGGGCACTGGACAGAGAGTAGGATCCCGAGCCACCTCTGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp GTCCCCCGGCCAGTGGCCCGGGAACCAAACGGCCCTTaGAATACGAAGCGGGTCCACGGCGCGTCCGAATTG +
Preference number: 6 (lower is better)
Translates to: VPRPVAREPNGP*NTKRVHGASEL
Trigger: CAATTCGGACGCGCCGTGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 72 bp CGCGTCCGAATTGTCGGGCATAGACCGGACATCCCCTaGGATGGCCGAGAATGCGGACGGGCGCCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: RVRIVGHRPDIP*DGRECGRAPGS
Trigger: GGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCTATGCCCGACAATTCGGACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp GCCGGGCGAGCTCCGGTGCGGGCTTCCGAGAGGAACTaGGATCCAGAGGTGGCTCGGGATCCTACTCTCTGT +
Preference number: 6 (lower is better)
Translates to: AGRAPVRASERN*DPEVARDPTLC
Trigger: ACAGAGAGTAGGATCCCGAGCCACCTCTGGATCCCAGTTCCTCTCGGAAGCCCGCACCGGAGCTCGCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp GCGTCCGAATTGTCGGGCATAGACCGGACATCCCCTTaGATGGCCGAGAATGCGGACGGGCGCCGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: ASELSGIDRTSP*MAENADGRRAP
Trigger: AGGAGCCCGGCGCCCGTCCGCATTCTCGGCCATCCAAGGGGATGTCCGGTCTATGCCCGACAATTCGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 72 bp AGTCCCCCGGCCAGTGGCCCGGGAACCAAACGGCCCTaGGAATACGAAGCGGGTCCACGGCGCGTCCGAATT +
Preference number: 6 (lower is better)
Translates to: SPPASGPGTKRP*EYEAGPRRVRI
Trigger: AATTCGGACGCGCCGTGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 90 bp TGCCTTTCCAGTCCCCCGGCCAGTGGCCCGGGAACCAAACGGCCCTaGGAATACGAAGCGGGTCCACGGCGCGTCCGAATTGTCGGGCAT +
Preference number: 6 (lower is better)
Translates to: CLSSPPASGPGTKRP*EYEAGPRRVRIVGH
Trigger: ATGCCCGACAATTCGGACGCGCCGTGGACCCGCTTCGTATTCCAAGGGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACTGGAAAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp CGGTGCGGGCTTCCGAGAGGAACTGGGATCCAGAGGTaGCTCGGGATCCTACTCTCTGTCCAGTGCCCCGTG +
Preference number: 6 (lower is better)
Translates to: RCGLPRGTGIQR*LGILLSVQCPV
Trigger: CACGGGGCACTGGACAGAGAGTAGGATCCCGAGCCACCTCTGGATCCCAGTTCCTCTCGGAAGCCCGCACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp TCCAGATGCCCGCTGCCTTTCCAGTCCCCCGGCCAGTaGCCCGGGAACCAAACGGCCCTTGGAATACGAAGC +
Preference number: 6 (lower is better)
Translates to: SRCPLPFQSPGQ*PGNQTALGIRS
Trigger: GCTTCGTATTCCAAGGGCCGTTTGGTTCCCGGGCCACTGGCCGGGGGACTGGAAAGGCAGCGGGCATCTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 90 bp CCAAACGGCCCTTGGAATACGAAGCGGGTCCACGGCGCGTCCGAATaGTCGGGCATAGACCGGACATCCCCTTGGATGGCCGAGAATGCG +
Preference number: 6 (lower is better)
Translates to: PNGPWNTKRVHGASE*SGIDRTSPWMAENA
Trigger: CGCATTCTCGGCCATCCAAGGGGATGTCCGGTCTATGCCCGACAATTCGGACGCGCCGTGGACCCGCTTCGTATTCCAAGGGCCGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 72 bp CCTTGGAATACGAAGCGGGTCCACGGCGCGTCCGAATaGTCGGGCATAGACCGGACATCCCCTTGGATGGCC +
Preference number: 6 (lower is better)
Translates to: PWNTKRVHGASE*SGIDRTSPWMA
Trigger: GGCCATCCAAGGGGATGTCCGGTCTATGCCCGACAATTCGGACGCGCCGTGGACCCGCTTCGTATTCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 72 bp TGGCCTCCAGGGCTGATGTCACCACGTTCATCCGCGTaGCCTCATCCAGCTCCAGTTCCACCTCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: WPPGLMSPRSSA*PHPAPVPPPPS
Trigger: GCTGGGAGGAGGTGGAACTGGAGCTGGATGAGGCAACGCGGATGAACGTGGTGACATCAGCCCTGGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
ENST00000458656.5
CDS GCA 72 bp ATGCCCCCACAATCCATGTACTTCTCCCGCAGGTCCTaGAGCTGGGAACCCACCCACACGCTCTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: MPPQSMYFSRRS*SWEPTHTLSSW
Trigger: CCAGGAAGAGAGCGTGTGGGTGGGTTCCCAGCTGCAGGACCTGCGGGAGAAGTACATGGATTGTGGGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS CCA 72 bp GAAGAGTCTCCAGAGGCACGCTGTATGGGTAATGGGTaGCAGACCCAGTGGACACTGGGGGTTGCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: EESPEARCMGNG*QTQWTLGVAGG
Trigger: TCCGCCAGCAACCCCCAGTGTCCACTGGGTCTGCCACCCATTACCCATACAGCGTGCCTCTGGAGACTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS CAA 72 bp CCTGAGCACCAGCACCTCCGACAGCTCAGCCATCTGTaGGCTGGCCTCCGAAAACTGCTCCACACACTCCAG +
Preference number: 6 (lower is better)
Translates to: PEHQHLRQLSHL*AGLRKLLHTLQ
Trigger: CTGGAGTGTGTGGAGCAGTTTTCGGAGGCCAGCCAACAGATGGCTGAGCTGTCGGAGGTGCTGGTGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 72 bp CATCTTCCACCTCAGCTGCCGCCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTTCTTGGCAGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: HLPPQLPPVMGI*PVGQLLLGSPQ
Trigger: CTGGGGGCTGCCAAGAAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGGCGGCAGCTGAGGTGGAAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442364.1
CDS CCA 72 bp CATAATTCATGTCCAGGTGTGAAGGGCCCAAGCCGCTaGCCTCCAGGGCTGATGTCACCACGTTCATCCGCG +
Preference number: 6 (lower is better)
Translates to: HNSCPGVKGPSR*PPGLMSPRSSA
Trigger: CGCGGATGAACGTGGTGACATCAGCCCTGGAGGCCAGCGGCTTGGGCCCTTCACACCTGGACATGAATTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
ENST00000458656.5
CDS CCA 72 bp CTTAGAGACGTTCTGAGCTCCTCAGCCAGCGTCTCCTaGAAACCAGGAAGAGTCTCCATCCGGCAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: LRDVLSSSASVS*KPGRVSIRQRC
Trigger: GCAGCGCTGCCGGATGGAGACTCTTCCTGGTTTCCAGGAGACGCTGGCTGAGGAGCTCAGAACGTCTCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341193.9
ENST00000393939.6
CDS TCA 72 bp CGACCTCCTGCTGCTGCCGTTCATAGTTTTCCAGCCTaGGCACCAGCACCTCCGACAGCTCAGCCATCTGTT +
Preference number: 6 (lower is better)
Translates to: RPPAAAVHSFPA*APAPPTAQPSV
Trigger: AACAGATGGCTGAGCTGTCGGAGGTGCTGGTGCTCAGGCTGGAAAACTATGAACGGCAGCAGCAGGAGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp GAACCCACCCACACGCTCTCTTCCTGGAGCTGCATCTaGATTTCCTTCTCCGAAGCCAGCTGCTTCTGCAAC +
Preference number: 6 (lower is better)
Translates to: EPTHTLSSWSCI*ISFSEASCFCN
Trigger: GTTGCAGAAGCAGCTGGCTTCGGAGAAGGAAATCCAGATGCAGCTCCAGGAAGAGAGCGTGTGGGTGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS TCA 72 bp GCTGGAGGAGCTCATCCCGCAAGTTCACCTGGTGTCTaGGGTATAAAATCTCCTCCTTGGCTGAGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: AGGAHPASSPGV*GIKSPPWLSPA
Trigger: TGCTGGGCTCAGCCAAGGAGGAGATTTTATACCTCAGACACCAGGTGAACTTGCGGGATGAGCTCCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp CTTAGAGACGTTCTGAGCTCCTCAGCCAGCGTCTCCTaGAAACCAGGAAGAGTCTCCAGAGGCACGCTGTAT +
Preference number: 6 (lower is better)
Translates to: LRDVLSSSASVS*KPGRVSRGTLY
Trigger: ATACAGCGTGCCTCTGGAGACTCTTCCTGGTTTCCAGGAGACGCTGGCTGAGGAGCTCAGAACGTCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310778.5
CDS CCA 72 bp ACCTCAGCTGCCGCCTGTAATGGGCATCTTGCCAGTTaGCCAGCTGCTGGAGGACATAATTCATGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: TSAAACNGHLAS*PAAGGHNSCPG
Trigger: ACCTGGACATGAATTATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGGCGGCAGCTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
ENST00000458656.5
CDS CAA 90 bp TTTCTGGAGCATCTTCCACCTCAGCTGCCGCCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTGGAGGACATAATTCATGTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: FLEHLPPQLPPVMGI*PVGQLLEDIIHVQV
Trigger: CACCTGGACATGAATTATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGGCGGCAGCTGAGGTGGAAGATGCTCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
ENST00000458656.5
CDS TCA 72 bp ACACAGGGTCTGAGATCATCCTCCTTAGAGACGTTCTaGGCTCCTCAGCCAGCGTCTCCTGGAAACCAGGAA +
Preference number: 6 (lower is better)
Translates to: TQGLRSSSLETF*APQPASPGNQE
Trigger: TTCCTGGTTTCCAGGAGACGCTGGCTGAGGAGCTCAGAACGTCTCTAAGGAGGATGATCTCAGACCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS GCA 72 bp TCAAAACACTGTTCTGTTTCACCAGGGACTGGCCGATaGGAGCTGCAGTGTTCAGGTCCCTCTCTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SKHCSVSPGTGR*ELQCSGPSLSA
Trigger: TGCAGAGAGAGAGGGACCTGAACACTGCAGCTCGCATCGGCCAGTCCCTGGTGAAACAGAACAGTGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CCA 72 bp TCCTCCATCAAAACACTGTTCTGTTTCACCAGGGACTaGCCGATGCGAGCTGCAGTGTTCAGGTCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: SSIKTLFCFTRD*PMRAAVFRSLS
Trigger: AGAGAGGGACCTGAACACTGCAGCTCGCATCGGCCAGTCCCTGGTGAAACAGAACAGTGTTTTGATGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 72 bp CATCTTCCACCTCAGCTGCCGCCTGTAATGGGCATCTaGCCAGTTGGCCAGCTGCTGGAGGACATAATTCAT +
Preference number: 6 (lower is better)
Translates to: HLPPQLPPVMGI*PVGQLLEDIIH
Trigger: ATGAATTATGTCCTCCAGCAGCTGGCCAACTGGCAAGATGCCCATTACAGGCGGCAGCTGAGGTGGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
ENST00000458656.5
CDS TCA 72 bp GGCTGGCCTCCGAAAACTGCTCCACACACTCCAGAATaGGCATCTGTTCCTCATCCTCAAGAGTGTCGAGTT +
Preference number: 6 (lower is better)
Translates to: GWPPKTAPHTPE*ASVPHPQECRV
Trigger: AACTCGACACTCTTGAGGATGAGGAACAGATGCTCATTCTGGAGTGTGTGGAGCAGTTTTCGGAGGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 90 bp TCCAGCAAATATAACATCACTTTGACGTCTTCCTGGGTGATCTTTTaGACTGGCGGAGGTAGGTTAGGACACAGTGCTTCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SSKYNITLTSSWVIF*TGGGRLGHSASSSS
Trigger: GGAGCTGGAGGAAGCACTGTGTCCTAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATATTTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 90 bp TCCCAGACAGGTGGGAGAAGCTCCTCCAGCAAATATAACATCACTTaGACGTCTTCCTGGGTGATCTTTTTGACTGGCGGAGGTAGGTTA +
Preference number: 6 (lower is better)
Translates to: SQTGGRSSSSKYNIT*TSSWVIFLTGGGRL
Trigger: TAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATATTTGCTGGAGGAGCTTCTCCCACCTGTCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310778.5
ENST00000347901.9
ENST00000393939.6
CDS CAA 72 bp GGTGGGAGAAGCTCCTCCAGCAAATATAACATCACTTaGACGTCTTCCTGGGTGATCTTTTTGACTGGCGGA +
Preference number: 6 (lower is better)
Translates to: GGRSSSSKYNIT*TSSWVIFLTGG
Trigger: TCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATATTTGCTGGAGGAGCTTCTCCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310778.5
ENST00000347901.9
ENST00000393939.6
CDS CAA 90 bp ATCAGGAAGGCAGTACACACCTCCTCCAGCAAATATAACATCACTTaGACGTCTTCCTGGGTGATCTTTTTGACTGGCGGAGGTAGGTTA +
Preference number: 6 (lower is better)
Translates to: IRKAVHTSSSKYNIT*TSSWVIFLTGGGRL
Trigger: TAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATATTTGCTGGAGGAGGTGTGTACTGCCTTCCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341193.9
CDS CAA 72 bp TATAACATCACTTTGACGTCTTCCTGGGTGATCTTTTaGACTGGCGGAGGTAGGTTAGGACACAGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: YNITLTSSWVIF*TGGGRLGHSAS
Trigger: GGAAGCACTGTGTCCTAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6
CDS CAA 72 bp GCAGTACACACCTCCTCCAGCAAATATAACATCACTTaGACGTCTTCCTGGGTGATCTTTTTGACTGGCGGA +
Preference number: 6 (lower is better)
Translates to: AVHTSSSKYNIT*TSSWVIFLTGG
Trigger: TCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATATTTGCTGGAGGAGGTGTGTACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341193.9
CDS CCA 72 bp TCCTCCAGCAAATATAACATCACTTTGACGTCTTCCTaGGTGATCTTTTTGACTGGCGGAGGTAGGTTAGGA +
Preference number: 6 (lower is better)
Translates to: SSSKYNITLTSS*VIFLTGGGRLG
Trigger: TCCTAACCTACCTCCGCCAGTCAAAAAGATCACCCAGGAAGACGTCAAAGTGATGTTATATTTGCTGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310778.5
ENST00000341193.9
ENST00000347901.9
ENST00000393939.6