Pregenerated sensors for HAO2-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000230921

Ensembl transcript IDs: ENST00000419144.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	CAGCCAGGGTGGCGGAGGCATATACTGCTCCCCACATaGTTAACATTTCGCTGTTGCTTAAATACAGGCATG	+
Preference number: 6 (lower is better) Translates to: QPGWRRHILLPT*LTFRCCLNTGM Trigger: CATGCCTGTATTTAAGCAACAGCGAAATGTTAAGCATGTGGGGAGCAGTATATGCCTCCGCCACCCTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419144.1
CDS CCA 72 bp	CCAAGAAGGTTTATTGACACACACTCTCAGCCAGGGTaGCGGAGGCATATACTGCTCCCCACATGCTTAACA	+
Preference number: 6 (lower is better) Translates to: PRRFIDTHSQPG*RRHILLPTCLT Trigger: TGTTAAGCATGTGGGGAGCAGTATATGCCTCCGCCACCCTGGCTGAGAGTGTGTGTCAATAAACCTTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419144.1
CDS CAA 72 bp	CCAAGGATTGAAGAGCTGGTATGTGACCCTCCAGCTTaGTTTCCTCCTCTACAGCGATCCTCCATCCTCAAG	+
Preference number: 6 (lower is better) Translates to: PRIEELVCDPPA*FPPLQRSSILK Trigger: CTTGAGGATGGAGGATCGCTGTAGAGGAGGAAACAAAGCTGGAGGGTCACATACCAGCTCTTCAATCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419144.1
CDS CAA 90 bp	AATTCTAGGCCAAGGATTGAAGAGCTGGTATGTGACCCTCCAGCTTaGTTTCCTCCTCTACAGCGATCCTCCATCCTCAAGAAGGCAAAG	+
Preference number: 6 (lower is better) Translates to: NSRPRIEELVCDPPA*FPPLQRSSILKKAK Trigger: CTTTGCCTTCTTGAGGATGGAGGATCGCTGTAGAGGAGGAAACAAAGCTGGAGGGTCACATACCAGCTCTTCAATCCTTGGCCTAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419144.1
CDS CAA 90 bp	GTGGCGGAGGCATATACTGCTCCCCACATGCTTAACATTTCGCTGTaGCTTAAATACAGGCATGGCTCTGTGACTAGTTCTTCTGGCCAA	+
Preference number: 6 (lower is better) Translates to: VAEAYTAPHMLNISL*LKYRHGSVTSSSGQ Trigger: TTGGCCAGAAGAACTAGTCACAGAGCCATGCCTGTATTTAAGCAACAGCGAAATGTTAAGCATGTGGGGAGCAGTATATGCCTCCGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419144.1
CDS CAA 90 bp	TGTTTCCTCCTCTACAGCGATCCTCCATCCTCAAGAAGGCAAAGCTaGCAAACTCATAGTTGGCTTCCACGATATCTTCCATTCCCATCC	+
Preference number: 6 (lower is better) Translates to: CFLLYSDPPSSRRQS*QTHSWLPRYLPFPS Trigger: GGATGGGAATGGAAGATATCGTGGAAGCCAACTATGAGTTTGCAAGCTTTGCCTTCTTGAGGATGGAGGATCGCTGTAGAGGAGGAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419144.1
CDS CCA 72 bp	CCATCCTCAAGAAGGCAAAGCTTGCAAACTCATAGTTaGCTTCCACGATATCTTCCATTCCCATCCTATCTG	+
Preference number: 6 (lower is better) Translates to: PSSRRQSLQTHS*LPRYLPFPSYL Trigger: CAGATAGGATGGGAATGGAAGATATCGTGGAAGCCAACTATGAGTTTGCAAGCTTTGCCTTCTTGAGGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419144.1
CDS CAA 72 bp	GCATATACTGCTCCCCACATGCTTAACATTTCGCTGTaGCTTAAATACAGGCATGGCTCTGTGACTAGTTCT	+
Preference number: 6 (lower is better) Translates to: AYTAPHMLNISL*LKYRHGSVTSS Trigger: AGAACTAGTCACAGAGCCATGCCTGTATTTAAGCAACAGCGAAATGTTAAGCATGTGGGGAGCAGTATATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419144.1

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