RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000116882

Ensembl transcript IDs: ENST00000325945.4, ENST00000361035.8, ENST00000457318.5, ENST00000482991.1, ENST00000622548.4

Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTaGGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTATT +
Preference number: 1 (lower is better)
Translates to: RTEWGPGRTASHTVL*VCDPPVGNLSSLVI
Trigger: AATAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
3UTR TCA 90 bp ACTTCAGAGGAAGATTTAGGCAAGAGAGCAACATATAATAGTCAGTaGTACAAAGAAGGGCATGGAACATTTGGGGAACACAGGGGTTTG +
Preference number: 1 (lower is better)
Translates to: TSEEDLGKRATYNSQ*YKEGHGTFGEHRGL
Trigger: CAAACCCCTGTGTTCCCCAAATGTTCCATGCCCTTCTTTGTATCACTGACTATTATATGTTGCTCTCTTGCCTAAATCTTCCTCTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
3UTR-3UTR CCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGTTTGTGATCCTCCTGTaGGCAACCTCAGCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRFVILL*ATSAVW
Trigger: CCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAA...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
3UTR-3UTR TCA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGTCACACACTGTGCTGTaGGTTTGTGATCCTCCTGTG +
Preference number: 2 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHESHTVL*VCDPPV
Trigger: CACAGGAGGATCACAAACTCACAGCACAGTGTGTGA...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
3UTR-3UTR TCA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGTCACACACTGTGCTGTaGGTTTGTGATCCTCCTGTG +
Preference number: 2 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMSHTVL*VCDPPV
Trigger: CACAGGAGGATCACAAACTCACAGCACAGTGTGTGA...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
3UTR TCA 72 bp TGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTaGGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGT +
Preference number: 3 (lower is better)
Translates to: WGPGRTASHTVL*VCDPPVGNLSS
Trigger: ACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
3UTR GCA 72 bp CAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTaGTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCA +
Preference number: 3 (lower is better)
Translates to: QNGVQEGQHHTL*CEFVILLWATS
Trigger: TGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
3UTR TCA 72 bp GAAGATTTAGGCAAGAGAGCAACATATAATAGTCAGTaGTACAAAGAAGGGCATGGAACATTTGGGGAACAC +
Preference number: 3 (lower is better)
Translates to: EDLGKRATYNSQ*YKEGHGTFGEH
Trigger: GTGTTCCCCAAATGTTCCATGCCCTTCTTTGTATCACTGACTATTATATGTTGCTCTCTTGCCTAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTGGGGTTTGGAGGGCCTaGAGCACAGGGGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSGVWRA*STGVVV
Trigger: TACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCC...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGGGGGTTTGGAGGGCCTaGAGCACAGGGGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLGVWRA*STGVVV
Trigger: TACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCC...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGGGGGTTTGGAGGGCCTaGAGCACAGGGGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHEGVWRA*STGVVV
Trigger: TACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCC...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGCAGATACCAGCCGCTTaGGCAGCTCTTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLQIPAA*AALAVL
Trigger: GAGCACAGCAAGAGCTGCCCAAGCGGCTGGTATCTG...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTGGCAAATGTGCTGGTaGTGTAGCAGATACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSWQMCW*CSRYQP
Trigger: CGGCTGGTATCTGCTACATCACCAGCACATTTGCCA...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGGGACCAAGTTTCGATTaGTCTCAGCGACCGACCGGC +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRGPSFD*SQRPTG
Trigger: GCCGGTCGGTCGCTGAGATCAATCGAAACTTGGTCC...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCGGACCAAGTTTCGATTaGTCTCAGCGACCGACCGGC +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVGPSFD*SQRPTG
Trigger: GCCGGTCGGTCGCTGAGATCAATCGAAACTTGGTCC...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGGGGAAATATGGGCCATaGGCCTCCGGACAGAATGGG +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRGKYGP*ASGQNG
Trigger: CCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCC...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp TGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTATTGGCCGGGCAGCTCTTGCTGTaGTCATTTCCCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: CCEFVILLWATSAVWLLAGQLLL*SFPHQA
Trigger: GGCCTGATGGGGAAATGAGCACAGCAAGAGCTGCCC...GGCCAATAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGGGGCAGCTCTTGCTGTaGTCATTTCCCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVGQLLL*SFPHQA
Trigger: GGCCTGATGGGGAAATGAGCACAGCAAGAGCTGCCC...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGCGCTTGGGCAGCTCTTaGTGTGCTCATTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLRLGSS*CAHFPI
Trigger: GATGGGGAAATGAGCACAGCAAGAGCTGCCCAAGCG...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGCACCATGTTCACCCTTaGAGGCAAGGCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLHHVHP*RQGPIG
Trigger: TCCTATGGGGCCTTGCCTGCAAGGGTGAACATGGTG...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCCAGCCACTCAAAGCCTaGCTCACTGCCGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVQPLKA*LTAGGV
Trigger: AACACCTCCGGCAGTGAGCCAGGCTTTGAGTGGCTG...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGCCTCCCCTTGGATTGTaGTTCTGGTGTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLPPLGL*FWCPPQ
Trigger: CTGAGGTGGACACCAGAACCACAATCCAAGGGGAGG...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCGGCCAGACAAGGCAGTaGAACCCTGTGGGTGCGATA +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVGQTRQ*NPVGAI
Trigger: TATCGCACCCACAGGGTTCCACTGCCTTGTCTGGCC...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGGGCCAGACAAGGCAGTaGAACCCTGTGGGTGCGATA +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVGQTRQ*NPVGAI
Trigger: TATCGCACCCACAGGGTTCCACTGCCTTGTCTGGCC...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGCAGATACCAGCCGCTTaGGCAGCTCTTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRQIPAA*AALAVL
Trigger: GAGCACAGCAAGAGCTGCCCAAGCGGCTGGTATCTG...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTTCTCGCGCATGGGCCTaGAAGTCTGTCAAACACACC +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFSRAWA*KSVKHT
Trigger: GGTGTGTTTGACAGACTTTCAGGCCCATGCGCGAGA...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGTGTTGTCATCCCGCGTaGTGCTGTCATCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVCCHPA*CCHLLH
Trigger: GTGGAGCAGATGACAGCATCACGCGGGATGACAACA...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCATGTTGTCATCCCGCGTaGTGCTGTCATCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QEGQHHTLCCEFVILLWACCHPA*CCHLLH
Trigger: GTGGAGCAGATGACAGCATCACGCGGGATGACAACA...TGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGGCAAATGTGCTGGTaGTGTAGCAGATACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLWQMCW*CSRYQP
Trigger: CGGCTGGTATCTGCTACATCACCAGCACATTTGCCA...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTAGGACCAAGTTTCGATTaGTCTCAGCGACCGACCGGC +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLGPSFD*SQRPTG
Trigger: GCCGGTCGGTCGCTGAGATCAATCGAAACTTGGTCC...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGGGAAATATGGGCCATaGGCCTCCGGACAGAATGGG +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPGKYGP*ASGQNG
Trigger: CCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCC...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGGGCAGCTCTTGCTGTaGTCATTTCCCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPGQLLL*SFPHQA
Trigger: GGCCTGATGGGGAAATGAGCACAGCAAGAGCTGCCC...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCCGCTTGGGCAGCTCTTaGTGTGCTCATTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVRLGSS*CAHFPI
Trigger: GATGGGGAAATGAGCACAGCAAGAGCTGCCCAAGCG...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGCGCTTGGGCAGCTCTTaGTGTGCTCATTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRRLGSS*CAHFPI
Trigger: GATGGGGAAATGAGCACAGCAAGAGCTGCCCAAGCG...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTGAGGCCTTCGGGAGCTaGAATGACAATGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSEAFGS*NDNVFK
Trigger: CTTGAAGACATTGTCATTGCAGCTCCCGAAGGCCTC...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGCCTTCAGCACATCATTaGCAGTTCGGACCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVPSAHH*QFGPRH
Trigger: ATGGCGGGGTCCGAACTGGCAATGATGTGCTGAAGG...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTCACCATGTTCACCCTTaGAGGCAAGGCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFHHVHP*RQGPIG
Trigger: TCCTATGGGGCCTTGCCTGCAAGGGTGAACATGGTG...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTACAGCCACTCAAAGCCTaGCTCACTGCCGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLQPLKA*LTAGGV
Trigger: AACACCTCCGGCAGTGAGCCAGGCTTTGAGTGGCTG...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCAGCCACTCAAAGCCTaGCTCACTGCCGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHEQPLKA*LTAGGV
Trigger: AACACCTCCGGCAGTGAGCCAGGCTTTGAGTGGCTG...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGCCTCCCCTTGGATTGTaGTTCTGGTGTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVPPLGL*FWCPPQ
Trigger: CTGAGGTGGACACCAGAACCACAATCCAAGGGGAGG...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGGGCCAGACAAGGCAGTaGAACCCTGTGGGTGCGATA +
Preference number: 4 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGGQTRQ*NPVGAI
Trigger: TATCGCACCCACAGGGTTCCACTGCCTTGTCTGGCC...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGCAGATACCAGCCGCTTaGGCAGCTCTTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGQIPAA*AALAVL
Trigger: GAGCACAGCAAGAGCTGCCCAAGCGGCTGGTATCTG...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGATTTGTGATCCTCCTGTaGGCAACCTCAGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGFVILL*ATSAVW
Trigger: CCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAA...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGTCTCGCGCATGGGCCTaGAAGTCTGTCAAACACACC +
Preference number: 4 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHESRAWA*KSVKHT
Trigger: GGTGTGTTTGACAGACTTTCAGGCCCATGCGCGAGA...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGTGTTGTCATCCCGCGTaGTGCTGTCATCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPCCHPA*CCHLLH
Trigger: GTGGAGCAGATGACAGCATCACGCGGGATGACAACA...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGGTGGAACCCTGTGGGTaGGATACAAATAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVVEPCG*DTNRGT
Trigger: AGTGCCCCTATTTGTATCGCACCCACAGGGTTCCAC...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGGTGGAACCCTGTGGGTaGGATACAAATAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRVEPCG*DTNRGT
Trigger: AGTGCCCCTATTTGTATCGCACCCACAGGGTTCCAC...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp TGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTATTGGCCGTGGAACCCTGTGGGTaGGATACAAATAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: CCEFVILLWATSAVWLLAVEPCG*DTNRGT
Trigger: AGTGCCCCTATTTGTATCGCACCCACAGGGTTCCAC...GGCCAATAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAGAGGCCTTCGGGAGCTaGAATGACAATGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGEAFGS*NDNVFK
Trigger: CTTGAAGACATTGTCATTGCAGCTCCCGAAGGCCTC...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTACCTTCAGCACATCATTaGCAGTTCGGACCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLPSAHH*QFGPRH
Trigger: ATGGCGGGGTCCGAACTGGCAATGATGTGCTGAAGG...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTTCAGCACATCATTaGCAGTTCGGACCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHEPSAHH*QFGPRH
Trigger: ATGGCGGGGTCCGAACTGGCAATGATGTGCTGAAGG...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGCACCATGTTCACCCTTaGAGGCAAGGCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPHHVHP*RQGPIG
Trigger: TCCTATGGGGCCTTGCCTGCAAGGGTGAACATGGTG...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTCTTGGATTGTGGTTCTaGTGTCCACCTCAGACACAT +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSLGLWF*CPPQTH
Trigger: ATGTGTCTGAGGTGGACACCAGAACCACAATCCAAG...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGCCTCCCCTTGGATTGTaGTTCTGGTGTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPPPLGL*FWCPPQ
Trigger: CTGAGGTGGACACCAGAACCACAATCCAAGGGGAGG...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTGTTCAGCTGCAGGTCTaGATGCACATAGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSVQLQV*MHIELE
Trigger: TTCCAACTCTATGTGCATCCAGACCTGCAGCTGAAC...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTTTGTGATCCTCCTGTaGGCAACCTCAGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVFVILL*ATSAVW
Trigger: CCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAA...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTTTTGTGATCCTCCTGTaGGCAACCTCAGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFFVILL*ATSAVW
Trigger: CCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAA...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGAATGTGCCCACGTCATaGCATTCCCAGCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLNVPTS*HSQLSR
Trigger: CCTAGAAAGCTGGGAATGCCATGACGTGGGCACATT...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTTCTCGCGCATGGGCCTaGAAGTCTGTCAAACACACC +
Preference number: 4 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGSRAWA*KSVKHT
Trigger: GGTGTGTTTGACAGACTTTCAGGCCCATGCGCGAGA...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTGGCAAATGTGCTGGTaGTGTAGCAGATACCAGCCG +
Preference number: 4 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGWQMCW*CSRYQP
Trigger: CGGCTGGTATCTGCTACATCACCAGCACATTTGCCA...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp TGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTATTGGCCCTTCGGGAGCTGCAATaGCAATGTCTTCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: CCEFVILLWATSAVWLLALRELQ*QCLQGY
Trigger: GTAGCCTTGAAGACATTGTCATTGCAGCTCCCGAAG...GGCCAATAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTTCACACACTGTGCTGTaGGTTTGTGATCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFSHTVL*VCDPPV
Trigger: CACAGGAGGATCACAAACTCACAGCACAGTGTGTGA...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp TGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTATTGGCCTCACACACTGTGCTGTaGGTTTGTGATCCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: CCEFVILLWATSAVWLLASHTVL*VCDPPV
Trigger: CACAGGAGGATCACAAACTCACAGCACAGTGTGTGA...GGCCAATAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTGGGCAATCGAGTTATaGTCTGAAACCAGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSWAIEL*SETRRD
Trigger: ATCTCTCCTGGTTTCAGAGCATAACTCGATTGCCCA...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTATACCCTGGACATTGTaGTTCACAGCTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSIPWTL*FTANSA
Trigger: TGCAGAGTTAGCTGTGAAGCACAATGTCCAGGGTAT...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGAGAACCTCATCAAGCTaGCTCCCACCATGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVRTSSS*LPPWLE
Trigger: TTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCT...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGCAGCATCACACACTGTaGTGTGAGTTTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLQHHTL*CEFVIL
Trigger: GAGGATCACAAACTCACAGCACAGTGTGTGATGCTG...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGATCTTGTCTTTCAATGTaGCCACGTCATGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGSCLSM*PRHGIP
Trigger: GGGAATGCCATGACGTGGGCACATTGAAAGACAAGA...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTACTGATCTCCTCCCCTTaGATTGTGGTTCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLLISSP*IVVLVS
Trigger: GGACACCAGAACCACAATCCAAGGGGAGGAGATCAG...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGGTTCAGCTGCAGGTCTaGATGCACATAGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLVQLQV*MHIELE
Trigger: TTCCAACTCTATGTGCATCCAGACCTGCAGCTGAAC...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGAGCTGCCTCCCACCATaGTTGGAAACAATGATACCC +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVSCLPP*LETMIP
Trigger: GGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCT...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGAAATGTGGGAAATATaGGCCATGAGCCTCCGGACA +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFEMWEI*AMSLRT
Trigger: TGTCCGGAGGCTCATGGCCCATATTTCCCACATTTC...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGCTTCGGGAGCTGCAATaGCAATGTCTTCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGLRELQ*QCLQGY
Trigger: GTAGCCTTGAAGACATTGTCATTGCAGCTCCCGAAG...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGCTTCGGGAGCTGCAATaGCAATGTCTTCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPLRELQ*QCLQGY
Trigger: GTAGCCTTGAAGACATTGTCATTGCAGCTCCCGAAG...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTAATCGAGTTATGCTCTaGAACCAGGAGAGATCATTC +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSNRVML*NQERSF
Trigger: GAATGATCTCTCCTGGTTTCAGAGCATAACTCGATT...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGAAATCCCTTTCAGGATaGTGGGCAATCGAGTTATGC +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLKSLSG*WAIELC
Trigger: GCATAACTCGATTGCCCATCATCCTGAAAGGGATTT...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTACCTAAAGTTCAAGGCTaGTCATGCCTGCCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLPKVQG*SCLPLV
Trigger: GACAAGAGGCAGGCATGATCAGCCTTGAACTTTAGG...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGTGTCATGTCGCCTGTTaGCACATACAGGTGTATCCA +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRCHVAC*HIQVYP
Trigger: TGGATACACCTGTATGTGGCAACAGGCGACATGACA...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGTGTCATGTCGCCTGTTaGCACATACAGGTGTATCCA +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVCHVAC*HIQVYP
Trigger: TGGATACACCTGTATGTGGCAACAGGCGACATGACA...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTAAGAACCTCATCAAGCTaGCTCCCACCATGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLRTSSS*LPPWLE
Trigger: TTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCT...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGAGAACCTCATCAAGCTaGCTCCCACCATGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPRTSSS*LPPWLE
Trigger: TTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCT...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGAAGGCTGATCATGCCTaGCTCTTGTCTTTCAATGTG +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLKADHA*LLSFNV
Trigger: CACATTGAAAGACAAGAGGCAGGCATGATCAGCCTT...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTCTTGGATTGTGGTTCTaGTGTCCACCTCAGACACAT +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFLGLWF*CPPQTH
Trigger: ATGTGTCTGAGGTGGACACCAGAACCACAATCCAAG...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTCTGATCTCCTCCCCTTaGATTGTGGTTCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGLISSP*IVVLVS
Trigger: GGACACCAGAACCACAATCCAAGGGGAGGAGATCAG...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGAGCTGCCTCCCACCATaGTTGGAAACAATGATACCC +
Preference number: 4 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHESCLPP*LETMIP
Trigger: GGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCT...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGAGCTGCCTCCCACCATaGTTGGAAACAATGATACCC +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPSCLPP*LETMIP
Trigger: GGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCT...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCAATAAAATCCCGAGTTaGCTTAGACAGCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVNKIPS*LRQLLS
Trigger: CGAGAGCAGCTGTCTAAGTCAACTCGGGATTTTATT...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAAAATCCCTTTCAGGATaGTGGGCAATCGAGTTATGC +
Preference number: 4 (lower is better)
Translates to: QEGQHHTLCCEFVILLWAKSLSG*WAIELC
Trigger: GCATAACTCGATTGCCCATCATCCTGAAAGGGATTT...TGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTGTCAAAGCATCAATTaGAGCAAGAACCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSCQSIN*SKNLIK
Trigger: CTTGATGAGGTTCTTGCTTCAATTGATGCTTTGACA...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGAGCTTCATTTCTTGGTaGACTGATGCTACTATCTGG +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLSFISW*TDATIW
Trigger: CCAGATAGTAGCATCAGTTCACCAAGAAATGAAGCT...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTGCGAATTCTTTTAAATaGTGCAATGTTGTCATCCCG +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSANSFK*CNVVIP
Trigger: CGGGATGACAACATTGCAGCATTTAAAAGAATTCGC...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGTGGGCAATCGAGTTATaGTCTGAAACCAGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRWAIEL*SETRRD
Trigger: ATCTCTCCTGGTTTCAGAGCATAACTCGATTGCCCA...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGTGGGCAATCGAGTTATaGTCTGAAACCAGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVWAIEL*SETRRD
Trigger: ATCTCTCCTGGTTTCAGAGCATAACTCGATTGCCCA...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCATACCCTGGACATTGTaGTTCACAGCTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVIPWTL*FTANSA
Trigger: TGCAGAGTTAGCTGTGAAGCACAATGTCCAGGGTAT...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTACAGCATCACACACTGTaGTGTGAGTTTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLQHHTL*CEFVIL
Trigger: GAGGATCACAAACTCACAGCACAGTGTGTGATGCTG...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGGCCCTGGATTTTCACTaGCTCACCAGCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGALDFH*LTSFIS
Trigger: AGAAATGAAGCTGGTGAGGCAGTGAAAATCCAGGGC...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGTCTTGTCTTTCAATGTaGCCACGTCATGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPSCLSM*PRHGIP
Trigger: GGGAATGCCATGACGTGGGCACATTGAAAGACAAGA...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCAAGGCTGATCATGCCTaGCTCTTGTCTTTCAATGTG +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVKADHA*LLSFNV
Trigger: CACATTGAAAGACAAGAGGCAGGCATGATCAGCCTT...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGAGGGATTCTACCCTCTaGATCAACTGTTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRRDSTL*INCLFS
Trigger: GCTGAACAAACAGTTGATCCAGAGGGTAGAATCCCT...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGGAAACAATGATACCCTaGACATTGTGCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLETMIP*TLCFTA
Trigger: AGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTC...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTAGGGCCATGGAAGTGTaGAACTCATTTGTTAAAATG +
Preference number: 4 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSRAMEV*NSFVKM
Trigger: CATTTTAACAAATGAGTTCCACACTTCCATGGCCCT...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGATACAGCCTGGAAAACTaGACCAAGTTTCGATTGATC +
Preference number: 4 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGYSLEN*TKFRLI
Trigger: GATCAATCGAAACTTGGTCCAGTTTTCCAGGCTGTA...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTGAAATGTGGGAAATATaGGCCATGAGCCTCCGGACA +
Preference number: 4 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGEMWEI*AMSLRT
Trigger: TGTCCGGAGGCTCATGGCCCATATTTCCCACATTTC...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAGTGGTATTAGAAATGTaGGAAATATGGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGVVLEM*EIWAMS
Trigger: GCTCATGGCCCATATTTCCCACATTTCTAATACCAC...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGAATGTGCCCACGTCATaGCATTCCCAGCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMNVPTS*HSQLSR
Trigger: CCTAGAAAGCTGGGAATGCCATGACGTGGGCACATT...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp TGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTATTGGCCCACCAAGGACATTTCTaGACCTTCACATTCACTCCA +
Preference number: 4 (lower is better)
Translates to: CCEFVILLWATSAVWLLAHQGHF*TFTFTP
Trigger: TGGAGTGAATGTGAAGGTCCAGAAATGTCCTTGGTG...GGCCAATAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGCACCAAGGACATTTCTaGACCTTCACATTCACTCCA +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVHQGHF*TFTFTP
Trigger: TGGAGTGAATGTGAAGGTCCAGAAATGTCCTTGGTG...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTTATTACCAAAGCTTTaGAACCTAGGGATTCTACCC +
Preference number: 4 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLLLPKL*NLGILP
Trigger: GGGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAA...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTTGTCATGTCGCCTGTTaGCACATACAGGTGTATCCA +
Preference number: 4 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGCHVAC*HIQVYP
Trigger: TGGATACACCTGTATGTGGCAACAGGCGACATGACA...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGCAGCATCACACACTGTaGTGTGAGTTTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMQHHTL*CEFVIL
Trigger: GAGGATCACAAACTCACAGCACAGTGTGTGATGCTG...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGAGGGATTCTACCCTCTaGATCAACTGTTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHERDSTL*INCLFS
Trigger: GCTGAACAAACAGTTGATCCAGAGGGTAGAATCCCT...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCGAAACAATGATACCCTaGACATTGTGCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVETMIP*TLCFTA
Trigger: AGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTC...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTTACAGCCTGGAAAACTaGACCAAGTTTCGATTGATC +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFYSLEN*TKFRLI
Trigger: GATCAATCGAAACTTGGTCCAGTTTTCCAGGCTGTA...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTACAGCCTGGAAAACTaGACCAAGTTTCGATTGATC +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVYSLEN*TKFRLI
Trigger: GATCAATCGAAACTTGGTCCAGTTTTCCAGGCTGTA...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCATACAAAGAAGGGCATaGAACATTTGGGGAACACAG +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVIQRRA*NIWGTQ
Trigger: CTGTGTTCCCCAAATGTTCCATGCCCTTCTTTGTAT...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTATACAAAGAAGGGCATaGAACATTTGGGGAACACAG +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFIQRRA*NIWGTQ
Trigger: CTGTGTTCCCCAAATGTTCCATGCCCTTCTTTGTAT...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGAATAAAATCCCGAGTTaGCTTAGACAGCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMNKIPS*LRQLLS
Trigger: CGAGAGCAGCTGTCTAAGTCAACTCGGGATTTTATT...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTTATTACCAAAGCTTTaGAACCTAGGGATTCTACCC +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVLLPKL*NLGILP
Trigger: GGGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAA...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGAATCGAGTTATGCTCTaGAACCAGGAGAGATCATTC +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPNRVML*NQERSF
Trigger: GAATGATCTCTCCTGGTTTCAGAGCATAACTCGATT...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTAAATCCCTTTCAGGATaGTGGGCAATCGAGTTATGC +
Preference number: 4 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGKSLSG*WAIELC
Trigger: GCATAACTCGATTGCCCATCATCCTGAAAGGGATTT...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGTCAAAGCATCAATTaGAGCAAGAACCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVCQSIN*SKNLIK
Trigger: CTTGATGAGGTTCTTGCTTCAATTGATGCTTTGACA...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAACATATAATAGTCAGTaGTACAAAGAAGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGTYNSQ*YKEGHG
Trigger: TCCATGCCCTTCTTTGTATCACTGACTATTATATGT...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGCATTTCTTGGTGAACTaGTGCTACTATCTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRHFLVN*CYYLVV
Trigger: AACTACCAGATAGTAGCATCAGTTCACCAAGAAATG...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGGCGAATTCTTTTAAATaGTGCAATGTTGTCATCCCG +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRANSFK*CNVVIP
Trigger: CGGGATGACAACATTGCAGCATTTAAAAGAATTCGC...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGATACCCTGGACATTGTaGTTCACAGCTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMIPWTL*FTANSA
Trigger: TGCAGAGTTAGCTGTGAAGCACAATGTCCAGGGTAT...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGAGGGCCATGGAAGTGTaGAACTCATTTGTTAAAATG +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRRAMEV*NSFVKM
Trigger: CATTTTAACAAATGAGTTCCACACTTCCATGGCCCT...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTAGTGGTATTAGAAATGTaGGAAATATGGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLVVLEM*EIWAMS
Trigger: GCTCATGGCCCATATTTCCCACATTTCTAATACCAC...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGATACAAAGAAGGGCATaGAACATTTGGGGAACACAG +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPIQRRA*NIWGTQ
Trigger: CTGTGTTCCCCAAATGTTCCATGCCCTTCTTTGTAT...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTTATTACCAAAGCTTTaGAACCTAGGGATTCTACCC +
Preference number: 4 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGLLPKL*NLGILP
Trigger: GGGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAA...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGCCCTTTTTAGGTGATTaGAGATCTGTTAGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVPFLGD*RSVSVK
Trigger: CTTAACACTAACAGATCTTCAATCACCTAAAAAGGG...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGCCCTTTTTAGGTGATTaGAGATCTGTTAGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRPFLGD*RSVSVK
Trigger: CTTAACACTAACAGATCTTCAATCACCTAAAAAGGG...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp CAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAAATGATCTGTCCTTTTaGGATCTTTTACTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QEGQHHTLCCEFVILLWANDLSF*DLLLQR
Trigger: CCTCTGAAGTAAAAGATCTCAAAAGGACAGATCATT...TGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTAGGAATCTCAATGTTTaGATTGTCTGGAGCTTATTC +
Preference number: 4 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFRNLNV*IVWSLF
Trigger: GAATAAGCTCCAGACAATTCAAACATTGAGATTCCT...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGAATTCTTTTAAATGCTaGAATGTTGTCATCCCGCGT +
Preference number: 4 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRNSFKC*NVVIPR
Trigger: ACGCGGGATGACAACATTGCAGCATTTAAAAGAATT...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCAATTCTTTTAAATGCTaGAATGTTGTCATCCCGCGT +
Preference number: 4 (lower is better)
Translates to: HHTLCCEFVILLWATSAVNSFKC*NVVIPR
Trigger: ACGCGGGATGACAACATTGCAGCATTTAAAAGAATT...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGAGGGCCATGGAAGTGTaGAACTCATTTGTTAAAATG +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPRAMEV*NSFVKM
Trigger: CATTTTAACAAATGAGTTCCACACTTCCATGGCCCT...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGTGGTATTAGAAATGTaGGAAATATGGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMVVLEM*EIWAMS
Trigger: GCTCATGGCCCATATTTCCCACATTTCTAATACCAC...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CCA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGCTTCCATCAGCTTCCTaGGATCTTCCTAAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMLPSAS*DLPKVQ
Trigger: TTGAACTTTAGGAAGATCCCAGGAAGCTGATGGAAG...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGCCCTTTTTAGGTGATTaGAGATCTGTTAGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGPFLGD*RSVSVK
Trigger: CTTAACACTAACAGATCTTCAATCACCTAAAAAGGG...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGTGTCAAAGCATCAATTaGAGCAAGAACCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMCQSIN*SKNLIK
Trigger: CTTGATGAGGTTCTTGCTTCAATTGATGCTTTGACA...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGACATATAATAGTCAGTaGTACAAAGAAGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHETYNSQ*YKEGHG
Trigger: TCCATGCCCTTCTTTGTATCACTGACTATTATATGT...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTAACATATAATAGTCAGTaGTACAAAGAAGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: TLCCEFVILLWATSAVWLTYNSQ*YKEGHG
Trigger: TCCATGCCCTTCTTTGTATCACTGACTATTATATGT...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGAATGATCTGTCCTTTTaGGATCTTTTACTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPNDLSF*DLLLQR
Trigger: CCTCTGAAGTAAAAGATCTCAAAAGGACAGATCATT...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR GCA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGAATTCTTTTAAATGCTaGAATGTTGTCATCCCGCGT +
Preference number: 4 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPNSFKC*NVVIPR
Trigger: ACGCGGGATGACAACATTGCAGCATTTAAAAGAATT...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR TCA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTAGGAATCTCAATGTTTaGATTGTCTGGAGCTTATTC +
Preference number: 4 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGRNLNV*IVWSLF
Trigger: GAATAAGCTCCAGACAATTCAAACATTGAGATTCCT...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTCCGCTTGGGCAGCTCTaGCTGTGCTCATTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSPLGQL*LCSFPH
Trigger: ATGGGGAAATGAGCACAGCAAGAGCTGCCCAAGCGG...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGGCCTTCAGCACATCATaGCCAGTTCGGACCCCGCCA +
Preference number: 5 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLAFSTS*PVRTPP
Trigger: TGGCGGGGTCCGAACTGGCAATGATGTGCTGAAGGC...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp TGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTATTGGCCGCAGATACCAGCCGCTaGGGCAGCTCTTGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: CCEFVILLWATSAVWLLAADTSR*GSSCCA
Trigger: AGCACAGCAAGAGCTGCCCAAGCGGCTGGTATCTGC...GGCCAATAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGGCCTTCAGCACATCATaGCCAGTTCGGACCCCGCCA +
Preference number: 5 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRAFSTS*PVRTPP
Trigger: TGGCGGGGTCCGAACTGGCAATGATGTGCTGAAGGC...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGATCTCCTCCCCTTGGATaGTGGTTCTGGTGTCCACCT +
Preference number: 5 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGSPPLG*WFWCPP
Trigger: AGGTGGACACCAGAACCACAATCCAAGGGGAGGAGA...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCCCGCTTGGGCAGCTCTaGCTGTGCTCATTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: HHTLCCEFVILLWATSAVPLGQL*LCSFPH
Trigger: ATGGGGAAATGAGCACAGCAAGAGCTGCCCAAGCGG...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGGCAGATACCAGCCGCTaGGGCAGCTCTTGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHEADTSR*GSSCCA
Trigger: AGCACAGCAAGAGCTGCCCAAGCGGCTGGTATCTGC...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTACACCATGTTCACCCTaGCAGGCAAGGCCCCATAGG +
Preference number: 5 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFTPCSP*QARPHR
Trigger: CCTATGGGGCCTTGCCTGCAAGGGTGAACATGGTGT...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGGACCAAGTTTCGATaGATCTCAGCGACCGACCGG +
Preference number: 5 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLWTKFR*ISATDR
Trigger: CCGGTCGGTCGCTGAGATCAATCGAAACTTGGTCCA...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CCTCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTGATCATGCCTGCCTCTaGTCTTTCAATGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: PPDRMGSRKDSITHCAVSDHACL*SFNVPT
Trigger: CGTGGGCACATTGAAAGACAAGAGGCAGGCATGATC...ACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCATCTCCTCCCCTTGGATaGTGGTTCTGGTGTCCACCT +
Preference number: 5 (lower is better)
Translates to: QEGQHHTLCCEFVILLWASPPLG*WFWCPP
Trigger: AGGTGGACACCAGAACCACAATCCAAGGGGAGGAGA...TGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGATGGATGCACATAGAGTaGGAACCATCGGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGWMHIE*EPSEAF
Trigger: GAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCA...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGACACCATGTTCACCCTaGCAGGCAAGGCCCCATAGG +
Preference number: 5 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGTPCSP*QARPHR
Trigger: CCTATGGGGCCTTGCCTGCAAGGGTGAACATGGTGT...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGACACCATGTTCACCCTaGCAGGCAAGGCCCCATAGG +
Preference number: 5 (lower is better)
Translates to: GLKHRGGGIRNVGNMGHETPCSP*QARPHR
Trigger: CCTATGGGGCCTTGCCTGCAAGGGTGAACATGGTGT...CTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGACCAAGTTTCGATaGATCTCAGCGACCGACCGG +
Preference number: 5 (lower is better)
Translates to: HHTLCCEFVILLWATSAVWTKFR*ISATDR
Trigger: CCGGTCGGTCGCTGAGATCAATCGAAACTTGGTCCA...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTTGGATGCACATAGAGTaGGAACCATCGGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFWMHIE*EPSEAF
Trigger: GAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCA...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CACAGGGGTTTGGAGGGCCTGAAGCACAGGGGTGGTGGTATTAGAAATGTGGGAATGTCATGTCGCCTGTaGCCACATACAGGTGTATCC +
Preference number: 5 (lower is better)
Translates to: HRGLEGLKHRGGGIRNVGMSCRL*PHTGVS
Trigger: GGATACACCTGTATGTGGCAACAGGCGACATGACAT...TCCCACATTTCTAATACCACCACCCCTGTGCTTCAGGCCCTCCAAACCCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp TGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTATTGGCCAAGGGCATGGAACATTaGGGGAACACAGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: CCEFVILLWATSAVWLLAKGMEH*GNTGVW
Trigger: CCAAACCCCTGTGTTCCCCAAATGTTCCATGCCCTT...GGCCAATAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCAAGGGCATGGAACATTaGGGGAACACAGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: HHTLCCEFVILLWATSAVKGMEH*GNTGVW
Trigger: CCAAACCCCTGTGTTCCCCAAATGTTCCATGCCCTT...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS TCA 90 bp CCGCGTGATGCTGTCATCTGCTCCACCTTCAATAAAATCCCGAGTTaGCTTAGACAGCTGCTCTCGCGCATGGGCCTGAAAGTCTGTCAA +
Preference number: 5 (lower is better)
Translates to: PRDAVICSTFNKIPS*LRQLLSRMGLKVCQ
Trigger: TTGACAGACTTTCAGGCCCATGCGCGAGAGCAGCTGTCTAAGTCAACTCGGGATTTTATTGAAGGTGGAGCAGATGACAGCATCACGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS GCA 90 bp GTCTGGATGCACATAGAGTTGGAACCATCGGAGGCCTTCGGGAGCTaGAATGACAATGTCTTCAAGGCTACAGCTGGCAAATGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: VWMHIELEPSEAFGS*NDNVFKATAGKCAG
Trigger: ACCAGCACATTTGCCAGCTGTAGCCTTGAAGACATTGTCATTGCAGCTCCCGAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS CCA 90 bp AAGGCTGATCATGCCTGCCTCTTGTCTTTCAATGTGCCCACGTCATaGCATTCCCAGCTTTCTAGGCCCTGGATTTTCACTGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: KADHACLLSFNVPTS*HSQLSRPWIFTASP
Trigger: TGGTGAGGCAGTGAAAATCCAGGGCCTAGAAAGCTGGGAATGCCATGACGTGGGCACATTGAAAGACAAGAGGCAGGCATGATCAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTTCTCCTCCCCTTGGATaGTGGTTCTGGTGTCCACCT +
Preference number: 5 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGSPPLG*WFWCPP
Trigger: AGGTGGACACCAGAACCACAATCCAAGGGGAGGAGA...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCACTCTGGATCAACTGTTaGTTCAGCTGCAGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: QEGQHHTLCCEFVILLWALWINC*FSCRSG
Trigger: TCCAGACCTGCAGCTGAACAAACAGTTGATCCAGAG...TGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CATCACACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCCTCTGGATCAACTGTTaGTTCAGCTGCAGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: HHTLCCEFVILLWATSAVLWINC*FSCRSG
Trigger: TCCAGACCTGCAGCTGAACAAACAGTTGATCCAGAG...GACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGTGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGATGTCATGTCGCCTGTaGCCACATACAGGTGTATCC +
Preference number: 5 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRMSCRL*PHTGVS
Trigger: GGATACACCTGTATGTGGCAACAGGCGACATGACAT...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGATGTCATGTCGCCTGTaGCCACATACAGGTGTATCC +
Preference number: 5 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVMSCRL*PHTGVS
Trigger: GGATACACCTGTATGTGGCAACAGGCGACATGACAT...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTAAAGGGCATGGAACATTaGGGGAACACAGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: TLCCEFVILLWATSAVWLKGMEH*GNTGVW
Trigger: CCAAACCCCTGTGTTCCCCAAATGTTCCATGCCCTT...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTTGGATGCACATAGAGTaGGAACCATCGGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGWMHIE*EPSEAF
Trigger: GAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCA...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS GCA 90 bp CATCAGCTTCCTGGGATCTTCCTAAAGTTCAAGGCTGATCATGCCTaGCTCTTGTCTTTCAATGTGCCCACGTCATGGCATTCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: HQLPGIFLKFKADHA*LLSFNVPTSWHSQL
Trigger: AAGCTGGGAATGCCATGACGTGGGCACATTGAAAGACAAGAGGCAGGCATGATCAGCCTTGAACTTTAGGAAGATCCCAGGAAGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTCTCTGGATCAACTGTTaGTTCAGCTGCAGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGLWINC*FSCRSG
Trigger: TCCAGACCTGCAGCTGAACAAACAGTTGATCCAGAG...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGTGATGATACCCTGGACATaGTGCTTCACAGCTAACTCT +
Preference number: 5 (lower is better)
Translates to: GQNGVQEGQHHTLCCEFVMIPWT*CFTANS
Trigger: AGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCAT...CACAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp TCCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTATGATACCCTGGACATaGTGCTTCACAGCTAACTCT +
Preference number: 5 (lower is better)
Translates to: SGQNGVQEGQHHTLCCEFMIPWT*CFTANS
Trigger: AGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCAT...AAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp AAGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGCATTCACTCCACATCTaGTCTTCCATCAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: KHRGGGIRNVGNMGHEPPHSLHI*SSISFL
Trigger: CAGGAAGCTGATGGAAGACAAGATGTGGAGTGAATG...CGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS TCA 90 bp TCTTGTCTTCCATCAGCTTCCTGGGATCTTCCTAAAGTTCAAGGCTaGTCATGCCTGCCTCTTGTCTTTCAATGTGCCCACGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: SCLPSASWDLPKVQG*SCLPLVFQCAHVMA
Trigger: TGCCATGACGTGGGCACATTGAAAGACAAGAGGCAGGCATGATCAGCCTTGAACTTTAGGAAGATCCCAGGAAGCTGATGGAAGACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp CCGGACAGAATGGGGTCCAGGAAGGACAGCATCACACACTGTGCTGTGAGTTTGCTGTCAAAGCATCAATaGAAGCAAGAACCTCATCAA +
Preference number: 5 (lower is better)
Translates to: PDRMGSRKDSITHCAVSLLSKHQ*KQEPHQ
Trigger: TTGATGAGGTTCTTGCTTCAATTGATGCTTTGACAG...CAAACTCACAGCACAGTGTGTGATGCTGTCCTTCCTGGACCCCATTCTGTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS TCA 90 bp AAGCAAGAACCTCATCAAGCTGCCTCCCACCATGGTTGGAAACAATaGTACCCTGGACATTGTGCTTCACAGCTAACTCTGCATCCTCTT +
Preference number: 5 (lower is better)
Translates to: KQEPHQAASHHGWKQ*YPGHCASQLTLHPL
Trigger: AAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp AGCACAGGGGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGGTTATTACCAAAGCTTaGAAACCTAGGGATTCTACC +
Preference number: 5 (lower is better)
Translates to: STGVVVLEMWEIWAMSLRVITKA*KPRDST
Trigger: GGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAAC...CCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACCCCTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGTATGATACCCTGGACATaGTGCTTCACAGCTAACTCT +
Preference number: 5 (lower is better)
Translates to: VVLEMWEIWAMSLRTEWGMIPWT*CFTANS
Trigger: AGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCAT...ACCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS TCA 90 bp ATAAAATCCCGAGTTGACTTAGACAGCTGCTCTCGCGCATGGGCCTaGAAGTCTGTCAAACACACCAAGGACATTTCTGGACCTTATTCT +
Preference number: 5 (lower is better)
Translates to: IKSRVDLDSCSRAWA*KSVKHTKDISGPYS
Trigger: AGAATAAGGTCCAGAAATGTCCTTGGTGTGTTTGACAGACTTTCAGGCCCATGCGCGAGAGCAGCTGTCTAAGTCAACTCGGGATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325945.4
ENST00000457318.5
CDS CCA 90 bp ACCTCATCAAGCTGCCTCCCACCATGGTTGGAAACAATGATACCCTaGACATTGTGCTTCACAGCTAACTCTGCATCCTCTTTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: TSSSCLPPWLETMIP*TLCFTANSASSFVK
Trigger: TTTGACAAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTAGTTATTACCAAAGCTTaGAAACCTAGGGATTCTACC +
Preference number: 5 (lower is better)
Translates to: TLCCEFVILLWATSAVWLVITKA*KPRDST
Trigger: GGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAAC...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp ACACTGTGCTGTGAGTTTGTGATCCTCCTGTGGGCAACCTCAGCAGTCTGGTTACTGTCAAAGCATCAATaGAAGCAAGAACCTCATCAA +
Preference number: 5 (lower is better)
Translates to: TLCCEFVILLWATSAVWLLSKHQ*KQEPHQ
Trigger: TTGATGAGGTTCTTGCTTCAATTGATGCTTTGACAG...TAACCAGACTGCTGAGGTTGCCCACAGGAGGATCACAAACTCACAGCACAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGGGCTGTCAAAGCATCAATaGAAGCAAGAACCTCATCAA +
Preference number: 5 (lower is better)
Translates to: GGIRNVGNMGHEPPDRMGLSKHQ*KQEPHQ
Trigger: TTGATGAGGTTCTTGCTTCAATTGATGCTTTGACAG...CCCCATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS CCA 90 bp AAAGCATCAATTGAAGCAAGAACCTCATCAAGCTGCCTCCCACCATaGTTGGAAACAATGATACCCTGGACATTGTGCTTCACAGCTAAC +
Preference number: 5 (lower is better)
Translates to: KASIEARTSSSCLPP*LETMIPWTLCFTAN
Trigger: GTTAGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCTTGCTTCAATTGATGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS-3UTR CAA 90 bp GGTGGTGGTATTAGAAATGTGGGAAATATGGGCCATGAGCCTCCGGACAGAATGGTTATTACCAAAGCTTaGAAACCTAGGGATTCTACC +
Preference number: 5 (lower is better)
Translates to: GGGIRNVGNMGHEPPDRMVITKA*KPRDST
Trigger: GGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAAC...CATTCTGTCCGGAGGCTCATGGCCCATATTTCCCACATTTCTAATACCACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS TCA 90 bp GCCTGTTGCCACATACAGGTGTATCCAAAGTTATTACCAAAGCTTTaGAACCTAGGGATTCTACCCTCTGGATCAACTGTTTGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ACCHIQVYPKLLPKL*NLGILPSGSTVCSA
Trigger: AGCTGAACAAACAGTTGATCCAGAGGGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAACTTTGGATACACCTGTATGTGGCAACAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS CAA 72 bp CTGTTTGTTCAGCTGCAGGTCTGGATGCACATAGAGTaGGAACCATCGGAGGCCTTCGGGAGCTGCAATGAC +
Preference number: 6 (lower is better)
Translates to: LFVQLQVWMHIE*EPSEAFGSCND
Trigger: GTCATTGCAGCTCCCGAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCAGACCTGCAGCTGAACAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS CAA 72 bp CTGTTTGTTCAGCTGCAGGTCTGGATGCACATAGAGTaGGAACCATCGGAGGCCTTCGGGAGCTCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: LFVQLQVWMHIE*EPSEAFGSSCC
Trigger: ACAGCAAGAGCTCCCGAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCAGACCTGCAGCTGAACAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457318.5
CDS TCA 72 bp AGAGTTGGAACCATCGGAGGCCTTCGGGAGCTGCAATaGCAATGTCTTCAAGGCTACAGCTGGCAAATGTGC +
Preference number: 6 (lower is better)
Translates to: RVGTIGGLRELQ*QCLQGYSWQMC
Trigger: GCACATTTGCCAGCTGTAGCCTTGAAGACATTGTCATTGCAGCTCCCGAAGGCCTCCGATGGTTCCAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS GCA 72 bp TCAAGGCTGATCATGCCTGCCTCTTGTCTTTCAATGTaGCCACGTCATGGCATTCCCAGCTTTCTAGGCCCT +
Preference number: 6 (lower is better)
Translates to: SRLIMPASCLSM*PRHGIPSFLGP
Trigger: AGGGCCTAGAAAGCTGGGAATGCCATGACGTGGGCACATTGAAAGACAAGAGGCAGGCATGATCAGCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS CCA 72 bp GGTGCGATACAAATAGGGGCACTGATCTCCTCCCCTTaGATTGTGGTTCTGGTGTCCACCTCAGACACATCT +
Preference number: 6 (lower is better)
Translates to: GAIQIGALISSP*IVVLVSTSDTS
Trigger: AGATGTGTCTGAGGTGGACACCAGAACCACAATCCAAGGGGAGGAGATCAGTGCCCCTATTTGTATCGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS CAA 72 bp CGCGGACGGAGGCGAATTCTTTTAAATGCTGCAATGTaGTCATCCCGCGTGATGCTGTCATCTGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: RGRRRILLNAAM*SSRVMLSSAPP
Trigger: AGGTGGAGCAGATGACAGCATCACGCGGGATGACAACATTGCAGCATTTAAAAGAATTCGCCTCCGTCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS CAA 72 bp TTTTCTTACAGCCTGGAAAACTGGACCAAGTTTCGATaGATCTCAGCGACCGACCGGCAGCCTGTAAGGGCC +
Preference number: 6 (lower is better)
Translates to: FSYSLENWTKFR*ISATDRQPVRA
Trigger: GGCCCTTACAGGCTGCCGGTCGGTCGCTGAGATCAATCGAAACTTGGTCCAGTTTTCCAGGCTGTAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000482991.1
ENST00000622548.4
CDS CAA 90 bp CTGGATCAACTGTTTGTTCAGCTGCAGGTCTGGATGCACATAGAGTaGGAACCATCGGAGGCCTTCGGGAGCTCTTGCTGTGCTCATTTC +
Preference number: 6 (lower is better)
Translates to: LDQLFVQLQVWMHIE*EPSEAFGSSCCAHF
Trigger: GAAATGAGCACAGCAAGAGCTCCCGAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCAGACCTGCAGCTGAACAAACAGTTGATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457318.5
CDS CAA 90 bp CTGGATCAACTGTTTGTTCAGCTGCAGGTCTGGATGCACATAGAGTaGGAACCATCGGAGGCCTTCGGGAGCTGCAATGACAATGTCTTC +
Preference number: 6 (lower is better)
Translates to: LDQLFVQLQVWMHIE*EPSEAFGSCNDNVF
Trigger: GAAGACATTGTCATTGCAGCTCCCGAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCAGACCTGCAGCTGAACAAACAGTTGATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS TCA 72 bp GCTGTCATCTGCTCCACCTTCAATAAAATCCCGAGTTaGCTTAGACAGCTGCTCTCGCGCATGGGCCTGAAA +
Preference number: 6 (lower is better)
Translates to: AVICSTFNKIPS*LRQLLSRMGLK
Trigger: TTTCAGGCCCATGCGCGAGAGCAGCTGTCTAAGTCAACTCGGGATTTTATTGAAGGTGGAGCAGATGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS CCA 72 bp TACCCTCTGGATCAACTGTTTGTTCAGCTGCAGGTCTaGATGCACATAGAGTTGGAACCATCGGAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: YPLDQLFVQLQV*MHIELEPSEAF
Trigger: GAAGGCCTCCGATGGTTCCAACTCTATGTGCATCCAGACCTGCAGCTGAACAAACAGTTGATCCAGAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS CCA 72 bp CATGCCTGCCTCTTGTCTTTCAATGTGCCCACGTCATaGCATTCCCAGCTTTCTAGGCCCTGGATTTTCACT +
Preference number: 6 (lower is better)
Translates to: HACLLSFNVPTS*HSQLSRPWIFT
Trigger: AGTGAAAATCCAGGGCCTAGAAAGCTGGGAATGCCATGACGTGGGCACATTGAAAGACAAGAGGCAGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS CAA 90 bp CTTCCTGGGATCTTCCTAAAGTTCAAGGCTGATCATGCCTGCCTCTaGTCTTTCAATGTGCCCACGTCATGGCATTCCCAGCTTTCTAGG +
Preference number: 6 (lower is better)
Translates to: LPGIFLKFKADHACL*SFNVPTSWHSQLSR
Trigger: CCTAGAAAGCTGGGAATGCCATGACGTGGGCACATTGAAAGACAAGAGGCAGGCATGATCAGCCTTGAACTTTAGGAAGATCCCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS TCA 72 bp CCTCATCAAGCTGCCTCCCACCATGGTTGGAAACAATaGTACCCTGGACATTGTGCTTCACAGCTAACTCTG +
Preference number: 6 (lower is better)
Translates to: PHQAASHHGWKQ*YPGHCASQLTL
Trigger: CAGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS CCA 72 bp AGCTGCCTCCCACCATGGTTGGAAACAATGATACCCTaGACATTGTGCTTCACAGCTAACTCTGCATCCTCT +
Preference number: 6 (lower is better)
Translates to: SCLPPWLETMIP*TLCFTANSASS
Trigger: AGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS CAA 72 bp ATCTTCCTAAAGTTCAAGGCTGATCATGCCTGCCTCTaGTCTTTCAATGTGCCCACGTCATGGCATTCCCAG +
Preference number: 6 (lower is better)
Translates to: IFLKFKADHACL*SFNVPTSWHSQ
Trigger: CTGGGAATGCCATGACGTGGGCACATTGAAAGACAAGAGGCAGGCATGATCAGCCTTGAACTTTAGGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS CAA 90 bp TCAAGCTGCCTCCCACCATGGTTGGAAACAATGATACCCTGGACATaGTGCTTCACAGCTAACTCTGCATCCTCTTTTGTCAAAATCCCT +
Preference number: 6 (lower is better)
Translates to: SSCLPPWLETMIPWT*CFTANSASSFVKIP
Trigger: AGGGATTTTGACAAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS CAA 90 bp GCATCAATTGAAGCAAGAACCTCATCAAGCTGCCTCCCACCATGGTaGGAAACAATGATACCCTGGACATTGTGCTTCACAGCTAACTCT +
Preference number: 6 (lower is better)
Translates to: ASIEARTSSSCLPPW*ETMIPWTLCFTANS
Trigger: AGAGTTAGCTGTGAAGCACAATGTCCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCTTGCTTCAATTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS GCA 72 bp GTCAAAGCATCAATTGAAGCAAGAACCTCATCAAGCTaGCTCCCACCATGGTTGGAAACAATGATACCCTGG +
Preference number: 6 (lower is better)
Translates to: VKASIEARTSSS*LPPWLETMIPW
Trigger: CCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCTTGCTTCAATTGATGCTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS CCA 72 bp ATTGAAGCAAGAACCTCATCAAGCTGCCTCCCACCATaGTTGGAAACAATGATACCCTGGACATTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: IEARTSSSCLPP*LETMIPWTLCF
Trigger: GAAGCACAATGTCCAGGGTATCATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCTTGCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000622548.4
CDS CCA 72 bp ATTACCAAAGCTTTGAAACCTAGGGATTCTACCCTCTaGATCAACTGTTTGTTCAGCTGCAGGTCTGGATGC +
Preference number: 6 (lower is better)
Translates to: ITKALKPRDSTL*INCLFSCRSGC
Trigger: GCATCCAGACCTGCAGCTGAACAAACAGTTGATCCAGAGGGTAGAATCCCTAGGTTTCAAAGCTTTGGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS CAA 90 bp CGCCTGTTGCCACATACAGGTGTATCCAAAGTTATTACCAAAGCTTaGAAACCTAGGGATTCTACCCTCTGGATCAACTGTTTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: RLLPHTGVSKVITKA*KPRDSTLWINCLFS
Trigger: GCTGAACAAACAGTTGATCCAGAGGGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAACTTTGGATACACCTGTATGTGGCAACAGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS GCA 72 bp TCCTCCTCAACTGGTTTCGAATGTCATGTCGCCTGTTaGCACATACAGGTGTATCCAAAGTTATTACCAAAG +
Preference number: 6 (lower is better)
Translates to: SSSTGFECHVAC*HIQVYPKLLPK
Trigger: CTTTGGTAATAACTTTGGATACACCTGTATGTGGCAACAGGCGACATGACATTCGAAACCAGTTGAGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS TCA 72 bp TTTTCACTGCCTCACCAGCTTCATTTCTTGGTGAACTaGTGCTACTATCTGGTAGTTCCCAGGAATCTCAAT +
Preference number: 6 (lower is better)
Translates to: FSLPHQLHFLVN*CYYLVVPRNLN
Trigger: ATTGAGATTCCTGGGAACTACCAGATAGTAGCATCAGTTCACCAAGAAATGAAGCTGGTGAGGCAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361035.8
ENST00000622548.4
CDS CAA 72 bp TTCCTCCTCAACTGGTTTCGAATGTCATGTCGCCTGTaGCCACATACAGGTGTATCCAAAGTTATTACCAAA +
Preference number: 6 (lower is better)
Translates to: FLLNWFRMSCRL*PHTGVSKVITK
Trigger: TTTGGTAATAACTTTGGATACACCTGTATGTGGCAACAGGCGACATGACATTCGAAACCAGTTGAGGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS CAA 72 bp CCACATACAGGTGTATCCAAAGTTATTACCAAAGCTTaGAAACCTAGGGATTCTACCCTCTGGATCAACTGT +
Preference number: 6 (lower is better)
Translates to: PHTGVSKVITKA*KPRDSTLWINC
Trigger: ACAGTTGATCCAGAGGGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAACTTTGGATACACCTGTATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS CAA 90 bp AGTGTTAAGTTCCTCCTCAACTGGTTTCGAATGTCATGTCGCCTGTaGCCACATACAGGTGTATCCAAAGTTATTACCAAAGCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: SVKFLLNWFRMSCRL*PHTGVSKVITKALK
Trigger: TTTCAAAGCTTTGGTAATAACTTTGGATACACCTGTATGTGGCAACAGGCGACATGACATTCGAAACCAGTTGAGGAGGAACTTAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4
CDS TCA 72 bp CACATACAGGTGTATCCAAAGTTATTACCAAAGCTTTaGAACCTAGGGATTCTACCCTCTGGATCAACTGTT +
Preference number: 6 (lower is better)
Translates to: HIQVYPKLLPKL*NLGILPSGSTV
Trigger: AACAGTTGATCCAGAGGGTAGAATCCCTAGGTTTCAAAGCTTTGGTAATAACTTTGGATACACCTGTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325945.4
ENST00000361035.8
ENST00000457318.5
ENST00000622548.4