Pregenerated sensors for HAO1 (Homo sapiens)
Ensembl gene IDs: ENSG00000101323Ensembl transcript IDs: ENST00000378789.4
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGATTGCTATTTTGTTGGAAAAGAACGACACCCTTTGTATTGAAGTaGGGAATTACAGACTGTGGTCACCCTCTGCACAGTGTCTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: GLLFCWKRTTPFVLK*GITDCGHPLHSVSL Trigger: CAAAGAGACACTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAGGGTGTCGTTCTTTTCCAACAAAATAGCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTCGACACCCTTTGTATTaGAGTGGGGAATTACAGACT | + |
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Preference number: 2 (lower is better) Translates to: QRSITNYRHPFQFSPVLPRHPLY*SGELQT Trigger: AGTCTGTAATTCCCCACTTCAATACAAAGGGTGTCG...AGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR-3UTR TCA 90 bp | GTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAACCTTCTCAAAGTTGTaGATCAGGCATTACCAACAC | + |
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Preference number: 2 (lower is better) Translates to: VIGNLHSKKYHQLPPPIPTFSKL*IRHYQH Trigger: GTGTTGGTAATGCCTGATTCACAACTTTGAGAAGGT...TGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR-3UTR GCA 90 bp | TATCTTTTCACCTTAGTGTTTGCTACCTCCAATTTTACTAAAGGATACAGCACTACTGTGGTCACCCTCTaGACAGTGTCTCTTTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: YLFTLVFATSNFTKGYSTTVVTL*TVSLCQ Trigger: TTGACAAAGAGACACTGTGCAGAGGGTGACCACAGT...AGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAACACTAAGGTGAAAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR GCA 72 bp | TCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTaGTACCTTCTCAAAGTTGTGAATCAGGCATTACCA | + |
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Preference number: 3 (lower is better) Translates to: SPITATHSNSLQ*YLLKVVNQALP Trigger: TGGTAATGCCTGATTCACAACTTTGAGAAGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR-3UTR CAA 90 bp | ACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATGACGTTGTCTAAACACATTACGACACCCTTTGTATaGAAGTGGGGAATTACAGAC | + |
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Preference number: 3 (lower is better) Translates to: TKGYSTLACQGMTLSKHITTPFV*KWGITD Trigger: GTCTGTAATTCCCCACTTCAATACAAAGGGTGTCGT...AATGTGTTTAGACAACGTCATCCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR CCA 72 bp | TTTTGTTGGAAAAGAACGACACCCTTTGTATTGAAGTaGGGAATTACAGACTGTGGTCACCCTCTGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: FCWKRTTPFVLK*GITDCGHPLHS Trigger: ACTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAGGGTGTCGTTCTTTTCCAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR-3UTR CAA 90 bp | TTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATGGGGATTGCTATTTTGTaGGAAAAGAACGACACCCTT | + |
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Preference number: 3 (lower is better) Translates to: FATSNFTKGYSTLACQGMGIAIL*EKNDTL Trigger: AAGGGTGTCGTTCTTTTCCAACAAAATAGCAATCCC...CATCCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR-3UTR CAA 90 bp | TACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGTGCCAGGGGATGACGTaGTCTAAACACATTTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: YIQRSITNYRHPFQFSPVCQGMT*SKHIFN Trigger: ATTGAAAATGTGTTTAGACAACGTCATCCCCTGGCA...CACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| 3UTR-3UTR CAA 90 bp | AAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCGGCATTACCAACACTTaGAACCTGAGCTTACAATTT | + |
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Preference number: 3 (lower is better) Translates to: KSTFKEVSPITATHSNSLGITNT*NLSLQF Trigger: AAATTGTAAGCTCAGGTTCAAAGTGTTGGTAATGCC...GAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | TTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATGCCCGTTCCCAGGGACTaGCAGGCTCTCACAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: FATSNFTKGYSTLACQGMPVPRD*QALTVA Trigger: TGCCACTGTGAGAGCCTGTCAGTCCCTGGGAACGGG...CATCCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | GACACCCTTTGTATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGCCCATCTTCTCTGCCTaGCGCACTAGCTTCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DTLCIEVGNYRLWSPSAQPIFSA*RTSFLV Trigger: CACCAAGAAGCTAGTGCGGCAGGCAGAGAAGATGGG...CTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAGGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | TGTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAGCTCGCCGTCCACATaGGCCATGCGCTGCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: CDWKSTFKEVSPITATHSSSPST*AMRCMA Trigger: GGCCATGCAGCGCATGGCTCATGTGGACGGCGAGCT...GGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | ACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATGACGTTGTCTAAACACATTCGCCACTTCTTCAATTaGGGAGGTGGCCCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: TKGYSTLACQGMTLSKHIRHFFN*GGGPGT Trigger: AGTTCCTGGGCCACCTCCTCAATTGAAGAAGTGGCG...AATGTGTTTAGACAACGTCATCCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | TACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGTTGCAGCCAACGAAGTaGCTCAGGACCAGCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: YIQRSITNYRHPFQFSPVLQPTK*LRTSFR Trigger: GCGGAAGCTGGTCCTGAGGCACTTCGTTGGCTGCAA...CACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | TTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATGAGCCCCCACACATATTaGCATGCTGACCCTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: FATSNFTKGYSTLACQGMSPHTY*HADPLS Trigger: GGACAGAGGGTCAGCATGCCAATATGTGTGGGGGCT...CATCCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | CCAGTGCTACCTTCTCAAAGTTGTGAATCAGGCATTACCAACACTTTGAACCTGCATCATCCAGACGGTTaGCCAGGTAAGGTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PVLPSQSCESGITNTLNLHHPDG*PGKVCP Trigger: TGGACACACCTTACCTGGGCAACCGTCTGGATGATG...CAGGTTCAAAGTGTTGGTAATGCCTGATTCACAACTTTGAGAAGGTAGCACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | CCAGTGCTACCTTCTCAAAGTTGTGAATCAGGCATTACCAACACTTTGAACCTGCTTTCAGAACATCAGTaGCTTTCCGCACACCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: PVLPSQSCESGITNTLNLLSEHQ*LSAHPR Trigger: ACGGGGGTGTGCGGAAAGGCACTGATGTTCTGAAAG...CAGGTTCAAAGTGTTGGTAATGCCTGATTCACAACTTTGAGAAGGTAGCACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | GACACCCTTTGTATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGCCACTGTCACAAATATaGCCTTGTAGCCCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: DTLCIEVGNYRLWSPSAQPLSQI*PCSPSS Trigger: AGAAGATGGGCTACAAGGCCATATTTGTGACAGTGG...CTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAGGGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | CATTCCAATTCTCTCCAGTGCTACCTTCTCAAAGTTGTGAATCAGGCATTACCAAGTTGTCGAGCCCCATaGTTCGACACCAAGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: HSNSLQCYLLKVVNQALPSCRAP*FDTKIP Trigger: TGGGATCTTGGTGTCGAATCATGGGGCTCGACAACT...TGGTAATGCCTGATTCACAACTTTGAGAAGGTAGCACTGGAGAGAATTGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | ATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTAATCTCGAGGACATCTTaGACACCTTTCTCCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IQRSITNYRHPFQFSPVLISRTS*TPFSPW Trigger: CCAGGGGGAGAAAGGTGTTCAAGATGTCCTCGAGAT...TAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | CTTTGTATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGTGTCTCCGACACCCTTTGTATTaGAGTGGGGAATTACAGACT | + |
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Preference number: 4 (lower is better) Translates to: LCIEVGNYRLWSPSAQCLRHPLY*SGELQT Trigger: AGTCTGTAATTCCCCACTTCAATACAAAGGGTGTCG...GAGACACTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | GACACCCTTTGTATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGTCCAATTCTCTCCAGTaGTACCTTCTCAAAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: DTLCIEVGNYRLWSPSAQSNSLQ*YLLKVV Trigger: CACAACTTTGAGAAGGTAGCACTGGAGAGAATTGGA...CTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAGGGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | AAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCGACAGGCTCTCACAGTaGCAAGCTCGCCGTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: KSTFKEVSPITATHSNSLDRLSQ*QARRPH Trigger: ATGTGGACGGCGAGCTTGCCACTGTGAGAGCCTGTC...GAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | GTGTTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGCTTCAATTGAGGAGGTaGCCCAGGAACTCAACATCA | + |
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Preference number: 4 (lower is better) Translates to: VFATSNFTKGYSTLACQGLQLRR*PRNSTS Trigger: TGATGTTGAGTTCCTGGGCCACCTCCTCAATTGAAG...CCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | TACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGACCCACTCAGAGCCATaGCCAACCGGAATTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: YIQRSITNYRHPFQFSPVTHSEP*PTGILP Trigger: AGGAAGAATTCCGGTTGGCCATGGCTCTGAGTGGGT...CACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | AAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTTCACATATTGGCATGCTaGCCCTCTGTCCTAAAACAG | + |
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Preference number: 4 (lower is better) Translates to: KEVSPITATHSNSLQCYLHILAC*PSVLKQ Trigger: CTGTTTTAGGACAGAGGGTCAGCATGCCAATATGTG...AAGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | CATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTCCAATGTCTTGTCGATaGCTTTCACATTCTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: HSKKYHQLPPPIPILSSAPMSCR*LSHSGT Trigger: GGTGCCAGAATGTGAAAGTCATCGACAAGACATTGG...AGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | GTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAAGGAACTCAACATCATaGCCGTTCCCAGGGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: VIGNLHSKKYHQLPPPIPRNSTS*PFPGTD Trigger: GTCAGTCCCTGGGAACGGGCATGATGTTGAGTTCCT...TGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | TACAGCACTTTAGCCTGCCAGGGGATGACGTTGTCTAAACACATTTTCAATGTTAACATCAATAGTGGCTaGCACCCCATCGAGTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: YSTLACQGMTLSKHIFNVNINSG*HPIELS Trigger: CGACAACTCGATGGGGTGCCAGCCACTATTGATGTT...AACATTGAAAATGTGTTTAGACAACGTCATCCCCTGGCAGGCTAAAGTGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | TGTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCACACCTTTCTCCCCCTaGAAAGCTAAGCCCCAAACG | + |
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Preference number: 4 (lower is better) Translates to: CDWKSTFKEVSPITATHSTPFSP*KAKPQT Trigger: CGTTTGGGGCTTAGCTTTCCAGGGGGAGAAAGGTGT...GGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | TGTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCGCACTAGCTTCTTGGTaGCTTCTCGGTCCTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: CDWKSTFKEVSPITATHSALASW*LLGPCR Trigger: TCTACAAGGACCGAGAAGTCACCAAGAAGCTAGTGC...GGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | TACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGGTTGTGGCGGCAGTTTaGATCTGTTACGCACATCAT | + |
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Preference number: 4 (lower is better) Translates to: YIQRSITNYRHPFQFSPVVVAAV*ICYAHH Trigger: ATGATGTGCGTAACAGATTCAAACTGCCGCCACAAC...CACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | AAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTTTGCAACAATTGGCAATaGTGTCAGTCTTCTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KEVSPITATHSNSLQCYLCNNWQ*CQSSQP Trigger: TGGCTGAGAAGACTGACATCATTGCCAATTGTTGCA...AAGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | ATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTAACTGTGGTCACCCTCTaGACAGTGTCTCTTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: IQRSITNYRHPFQFSPVLTVVTL*TVSLCQ Trigger: TTGACAAAGAGACACTGTGCAGAGGGTGACCACAGT...TAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | CAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTTTTCATCCTGAGTTGTaGCGGCAGTTTGAATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: QRSITNYRHPFQFSPVLPFHPEL*RQFESV Trigger: AACAGATTCAAACTGCCGCCACAACTCAGGATGAAA...AGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR TCA 90 bp | TTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATGACCTTCTCAAAGTTGTaGATCAGGCATTACCAACAC | + |
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Preference number: 4 (lower is better) Translates to: FATSNFTKGYSTLACQGMTFSKL*IRHYQH Trigger: GTGTTGGTAATGCCTGATTCACAACTTTGAGAAGGT...CATCCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | GTGTTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATTTTCACAGGTTATTaGTATCCCAGATGGAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: VFATSNFTKGYSTLACQGIFTGY*YPRWSS Trigger: CGAACTCCATCTGGGATAGCAATAACCTGTGAAAAT...CCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | ATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGTGTCTCTTTGTCCTTCCATCTGGAAAATaGTGCAATATTATCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: IEVGNYRLWSPSAQCLFVLPSGK*CNIISQ Trigger: TTGGCTGATAATATTGCAGCATTTTCCAGATGGAAG...GACAAAGAGACACTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | TGTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCTGCTTTAGCCACATATaGAGCAAGTCCACTGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: CDWKSTFKEVSPITATHSCFSHI*SKSTVV Trigger: GACGACAGTGGACTTGCTGCATATGTGGCTAAAGCA...GGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | AAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTTGATAGATGGGTCTATTaGTTTAGCCACATATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KEVSPITATHSNSLQCYLDRWVY*FSHICS Trigger: GCTGCATATGTGGCTAAAGCAATAGACCCATCTATC...AAGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | AAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCTACAGCACTTTAGCCTaGCAGGGGATGACGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: KSTFKEVSPITATHSNSLYSTLA*QGMTLS Trigger: AGACAACGTCATCCCCTGGCAGGCTAAAGTGCTGTA...GAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGATTCCGGAGCATCCTTaGATACAGCTTCCATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LVFATSNFTKGYSTLACQIPEHP*IQLPSG Trigger: TCCAGATGGAAGCTGTATCCAAGGATGCTCCGGAAT...CTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAACACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | GTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATGACTTTCACATTCTaGCACCCACTCAGAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: VIGNLHSKKYHQLPPPIPMTFTF*HPLRAM Trigger: CATGGCTCTGAGTGGGTGCCAGAATGTGAAAGTCAT...TGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | CCAGTGCTACCTTCTCAAAGTTGTGAATCAGGCATTACCAACACTTTGAACCTGTGCACTGTCAGATCTTaGAAACGGCCAAAGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: PVLPSQSCESGITNTLNLCTVRS*KRPKDF Trigger: AAAATCCTTTGGCCGTTTCCAAGATCTGACAGTGCA...CAGGTTCAAAGTGTTGGTAATGCCTGATTCACAACTTTGAGAAGGTAGCACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | TACAGCACTTTAGCCTGCCAGGGGATGACGTTGTCTAAACACATTTTCAATGTTCATCACCTCTCAAAATaGCCTTTGCAACAATTGGCA | + |
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Preference number: 4 (lower is better) Translates to: YSTLACQGMTLSKHIFNVHHLSK*PLQQLA Trigger: TGCCAATTGTTGCAAAGGGCATTTTGAGAGGTGATG...AACATTGAAAATGTGTTTAGACAACGTCATCCCCTGGCAGGCTAAAGTGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | CAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTGATGGGAAAATATTGTaGACTGTCAGATCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRSITNYRHPFQFSPVLPDGKIL*TVRSWK Trigger: TTTCCAAGATCTGACAGTGCACAATATTTTCCCATC...AGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | ATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCCTTTGTATTGAAGTaGGGAATTACAGACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQRSITNYRHPFQFSPVLPFVLK*GITDCG Trigger: ACCACAGTCTGTAATTCCCCACTTCAATACAAAGGG...TAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | CAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTGGATTGCTATTTTGTTaGAAAAGAACGACACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRSITNYRHPFQFSPVLPGLLFC*KRTTPF Trigger: AAAGGGTGTCGTTCTTTTCCAACAAAATAGCAATCC...AGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | AAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCTTCCCAGCTGATAGATaGGTCTATTGCTTTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTFKEVSPITATHSNSLFPADR*VYCFSH Trigger: GTGGCTAAAGCAATAGACCCATCTATCAGCTGGGAA...GAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | TGTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAGTTTCTTCATCATTTaGCCCAGACCTGTAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CDWKSTFKEVSPITATHSSFFII*PRPVIV Trigger: GACTATTACAGGTCTGGGGCAAATGATGAAGAAACT...GGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR GCA 90 bp | CATTCCAATTCTCTCCAGTGCTACCTTCTCAAAGTTGTGAATCAGGCATTACCACCATCTGGAAAATGCTaGAATATTATCAGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSNSLQCYLLKVVNQALPPSGKC*NIISQS Trigger: ACTTTGGCTGATAATATTGCAGCATTTTCCAGATGG...TGGTAATGCCTGATTCACAACTTTGAGAAGGTAGCACTGGAGAGAATTGGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CCA 90 bp | ACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATGACGTTGTCTAAACACATTGATACAGCTTCCATCTaGAAAATGCTGCAATATTAT | + |
|
Preference number: 4 (lower is better) Translates to: TKGYSTLACQGMTLSKHIDTASI*KMLQYY Trigger: ATAATATTGCAGCATTTTCCAGATGGAAGCTGTATC...AATGTGTTTAGACAACGTCATCCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS-3UTR TCA 90 bp | ATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTGTTGTTCATAATCATTaGTACAAATTAGCCGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGNLHSKKYHQLPPPIPIVVHNH*YKLAGG Trigger: TCCCCCGGCTAATTTGTATCAATGATTATGAACAAC...AATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS GCA 90 bp | CCGCCACTTCTTCAATTGAGGAGGTGGCCCAGGAACTCAACATCATaGCCGTTCCCAGGGACTGACAGGCTCTCACAGTGGCAAGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPLLQLRRWPRNSTS*PFPGTDRLSQWQAR Trigger: GCGAGCTTGCCACTGTGAGAGCCTGTCAGTCCCTGGGAACGGGCATGATGTTGAGTTCCTGGGCCACCTCCTCAATTGAAGAAGTGGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS TCA 90 bp | CAGCCAACGAAGTGCCTCAGGACCAGCTTCCGCCACTTCTTCAATTaGGGAGGTGGCCCAGGAACTCAACATCATGCCCGTTCCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QPTKCLRTSFRHFFN*GGGPGTQHHARSQG Trigger: TCCCTGGGAACGGGCATGATGTTGAGTTCCTGGGCCACCTCCTCAATTGAAGAAGTGGCGGAAGCTGGTCCTGAGGCACTTCGTTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS CCA 90 bp | GAAGTGCCTCAGGACCAGCTTCCGCCACTTCTTCAATTGAGGAGGTaGCCCAGGAACTCAACATCATGCCCGTTCCCAGGGACTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: EVPQDQLPPLLQLRR*PRNSTSCPFPGTDR Trigger: CCTGTCAGTCCCTGGGAACGGGCATGATGTTGAGTTCCTGGGCCACCTCCTCAATTGAAGAAGTGGCGGAAGCTGGTCCTGAGGCACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS GCA 90 bp | CAAACACAGCCTTGGCGCCAAGAGCCAGAGCTTTCAGAACATCAGTaGCTTTCCGCACACCCCCGTCCAGGAAGACTTCCACCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QTQPWRQEPELSEHQ*LSAHPRPGRLPPSL Trigger: AAGGGAAGGTGGAAGTCTTCCTGGACGGGGGTGTGCGGAAAGGCACTGATGTTCTGAAAGCTCTGGCTCTTGGCGCCAAGGCTGTGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS CCA 90 bp | CATCCAGACGGTTGCCCAGGTAAGGTGTGTCCACTGTCACAAATATaGCCTTGTAGCCCATCTTCTCTGCCTGCCGCACTAGCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPDGCPGKVCPLSQI*PCSPSSLPAALASW Trigger: CCAAGAAGCTAGTGCGGCAGGCAGAGAAGATGGGCTACAAGGCCATATTTGTGACAGTGGACACACCTTACCTGGGCAACCGTCTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | GACACCCTTTGTATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGCCCACAAACACAGCCTaGGCGCCAAGAGCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DTLCIEVGNYRLWSPSAQPTNTA*APRARA Trigger: AGCTCTGGCTCTTGGCGCCAAGGCTGTGTTTGTGGG...CTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAGGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS TCA 90 bp | TGGCCTTGTAGCCCATCTTCTCTGCCTGCCGCACTAGCTTCTTGGTaGCTTCTCGGTCCTTGTAGATATACAGTTGCAGCCAACGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPCSPSSLPAALASW*LLGPCRYTVAANEV Trigger: CACTTCGTTGGCTGCAACTGTATATCTACAAGGACCGAGAAGTCACCAAGAAGCTAGTGCGGCAGGCAGAGAAGATGGGCTACAAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS-3UTR CAA 90 bp | GACACCCTTTGTATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGTGCCGCACTAGCTTCTaGGTGACTTCTCGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DTLCIEVGNYRLWSPSAQCRTSF*VTSRSL Trigger: CAAGGACCGAGAAGTCACCAAGAAGCTAGTGCGGCA...CTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAGGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS TCA 90 bp | AGAACATCAATAGTGGCTGGCACCCCATCGAGTTGTCGAGCCCCATaGTTCGACACCAAGATCCCATTCAAGCCATGTTTAACAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTSIVAGTPSSCRAP*FDTKIPFKPCLTAS Trigger: GGAGGCTGTTAAACATGGCTTGAATGGGATCTTGGTGTCGAATCATGGGGCTCGACAACTCGATGGGGTGCCAGCCACTATTGATGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | GTGTTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGCCGCCACTTCTTCAATaGAGGAGGTGGCCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VFATSNFTKGYSTLACQGPPLLQ*RRWPRN Trigger: GTTCCTGGGCCACCTCCTCAATTGAAGAAGTGGCGG...CCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | GTGTTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGTGGCACCCCATCGAGTaGTCGAGCCCCATGATTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VFATSNFTKGYSTLACQGWHPIE*SSPMIR Trigger: TCGAATCATGGGGCTCGACAACTCGATGGGGTGCCA...CCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | ATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGTGTCTCTTTGTCCATTCCGGAGCATCCTaGGATACAGCTTCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IEVGNYRLWSPSAQCLFVHSGAS*DTASIW Trigger: CCAGATGGAAGCTGTATCCAAGGATGCTCCGGAATG...GACAAAGAGACACTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | TTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGGGGATGCTTGTAGATATACAGTaGCAGCCAACGAAGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FATSNFTKGYSTLACQGMLVDIQ*QPTKCL Trigger: GAGGCACTTCGTTGGCTGCAACTGTATATCTACAAG...CATCCCCTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | AAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTTAGTTGTGGCGGCAGTTaGAATCTGTTACGCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: KEVSPITATHSNSLQCYLSCGGS*NLLRTS Trigger: TGATGTGCGTAACAGATTCAAACTGCCGCCACAACT...AAGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | CTTTGTATTGAAGTGGGGAATTACAGACTGTGGTCACCCTCTGCACAGTGTCTCATTTTTCATCCTGAGTaGTGGCGGCAGTTTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LCIEVGNYRLWSPSAQCLIFHPE*WRQFES Trigger: AGATTCAAACTGCCGCCACAACTCAGGATGAAAAAT...GAGACACTGTGCAGAGGGTGACCACAGTCTGTAATTCCCCACTTCAATACAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | CAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTTGCCCTTTGCAACAATaGGCAATGATGTCAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRSITNYRHPFQFSPVLPCPLQQ*AMMSVF Trigger: GAAGACTGACATCATTGCCAATTGTTGCAAAGGGCA...AGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | GTGATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCACTAAGCCCCAAACGATaGGTCTCCCCACAAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: VIGNLHSKKYHQLPPPIPLSPKR*VSPQTQ Trigger: CTGTGTTTGTGGGGAGACCAATCGTTTGGGGCTTAG...TGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | TACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGTATCTCGAGGACATCTaGAACACCTTTCTCCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YIQRSITNYRHPFQFSPVYLEDI*NTFLPL Trigger: CAGGGGGAGAAAGGTGTTCAAGATGTCCTCGAGATA...CACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | CAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTAGTCTTCTCAGCCATTaGATATCTTCCCAGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: QRSITNYRHPFQFSPVLPSLLSH*ISSQLI Trigger: TATCAGCTGGGAAGATATCAAATGGCTGAGAAGACT...AGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS GCA 90 bp | GATATCTTCCCAGCTGATAGATGGGTCTATTGCTTTAGCCACATATaGAGCAAGTCCACTGTCGTCTCCAAAATTTTCCTCAGGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: DIFPADRWVYCFSHI*SKSTVVSKIFLRRK Trigger: TTTTCTCCTGAGGAAAATTTTGGAGACGACAGTGGACTTGCTGCATATGTGGCTAAAGCAATAGACCCATCTATCAGCTGGGAAGATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS GCA 90 bp | TCTTCTCAGCCATTTGATATCTTCCCAGCTGATAGATGGGTCTATTaGTTTAGCCACATATGCAGCAAGTCCACTGTCGTCTCCAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: SSQPFDIFPADRWVY*FSHICSKSTVVSKI Trigger: AATTTTGGAGACGACAGTGGACTTGCTGCATATGTGGCTAAAGCAATAGACCCATCTATCAGCTGGGAAGATATCAAATGGCTGAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | AAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTACCTTTTCCTCACCAATGTCTaGTCGATGACTTTCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: KEVSPITATHSNSLQCYLFLTNV*SMTFTF Trigger: GAATGTGAAAGTCATCGACAAGACATTGGTGAGGAA...AAGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | TACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCATTTTCACAGGTTATaGCTATCCCAGATGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YIQRSITNYRHPFQFSPVHFHRL*LSQMEF Trigger: GAACTCCATCTGGGATAGCAATAACCTGTGAAAATG...CACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | TACAGCACTTTAGCCTGCCAGGGGATGACGTTGTCTAAACACATTTTCAATGTTCTCTCAAAATGCCCTTaGCAACAATTGGCAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: YSTLACQGMTLSKHIFNVLSKCP*QQLAMM Trigger: CATCATTGCCAATTGTTGCAAAGGGCATTTTGAGAG...AACATTGAAAATGTGTTTAGACAACGTCATCCCCTGGCAGGCTAAAGTGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | CATTCCAATTCTCTCCAGTGCTACCTTCTCAAAGTTGTGAATCAGGCATTACCAGGGATTGCTATTTTGTaGGAAAAGAACGACACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSNSLQCYLLKVVNQALPGIAIL*EKNDTL Trigger: AAGGGTGTCGTTCTTTTCCAACAAAATAGCAATCCC...TGGTAATGCCTGATTCACAACTTTGAGAAGGTAGCACTGGAGAGAATTGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | CATTCCAATTCTCTCCAGTGCTACCTTCTCAAAGTTGTGAATCAGGCATTACCATGCCAGGGGATGACGTaGTCTAAACACATTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: HSNSLQCYLLKVVNQALPCQGMT*SKHIFN Trigger: ATTGAAAATGTGTTTAGACAACGTCATCCCCTGGCA...TGGTAATGCCTGATTCACAACTTTGAGAAGGTAGCACTGGAGAGAATTGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | ATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTAAAGTTTCTTCATCATTaGCCCCAGACCTGTAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: IQRSITNYRHPFQFSPVLKFLHH*PQTCNS Trigger: ACTATTACAGGTCTGGGGCAAATGATGAAGAAACTT...TAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | ATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTGTGCACTGTCAGATCTaGGAAACGGCCAAAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: IGNLHSKKYHQLPPPIPIVHCQI*ETAKGF Trigger: AAATCCTTTGGCCGTTTCCAAGATCTGACAGTGCAC...AATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | TTAGTGTTTGCTACCTCCAATTTTACTAAAGGATACAGCACTTTAGCCTGCCAGACAGATGGGAAAATATaGTGCACTGTCAGATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVFATSNFTKGYSTLACQTDGKI*CTVRSW Trigger: CCAAGATCTGACAGTGCACAATATTTTCCCATCTGT...CTGGCAGGCTAAAGTGCTGTATCCTTTAGTAAAATTGGAGGTAGCAAACACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | ATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTCTCTCCAGTGCTAAAAGGGATTGCTATTTaGTTGGAAAAGAACGACACC | + |
|
Preference number: 5 (lower is better) Translates to: IQRSITNYRHPFQFSPVLKGIAI*LEKNDT Trigger: GGTGTCGTTCTTTTCCAACAAAATAGCAATCCCTTT...TAGCACTGGAGAGAATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS-3UTR CAA 90 bp | ATTGGAAATCTACATTCAAAGAAGTATCACCAATTACCGCCACCCATTCCAATTGGCATTACCAACACTTaGAACCTGAGCTTACAATTT | + |
|
Preference number: 5 (lower is better) Translates to: IGNLHSKKYHQLPPPIPIGITNT*NLSLQF Trigger: AAATTGTAAGCTCAGGTTCAAAGTGTTGGTAATGCC...AATTGGAATGGGTGGCGGTAATTGGTGATACTTCTTTGAATGTAGATTTCCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS CAA 90 bp | GCAGCCAACGAAGTGCCTCAGGACCAGCTTCCGCCACTTCTTCAATaGAGGAGGTGGCCCAGGAACTCAACATCATGCCCGTTCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AANEVPQDQLPPLLQ*RRWPRNSTSCPFPG Trigger: CCCTGGGAACGGGCATGATGTTGAGTTCCTGGGCCACCTCCTCAATTGAAGAAGTGGCGGAAGCTGGTCCTGAGGCACTTCGTTGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS CCA 72 bp | CAGGACCAGCTTCCGCCACTTCTTCAATTGAGGAGGTaGCCCAGGAACTCAACATCATGCCCGTTCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QDQLPPLLQLRR*PRNSTSCPFPG Trigger: CCCTGGGAACGGGCATGATGTTGAGTTCCTGGGCCACCTCCTCAATTGAAGAAGTGGCGGAAGCTGGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS GCA 72 bp | CTTCAATTGAGGAGGTGGCCCAGGAACTCAACATCATaGCCGTTCCCAGGGACTGACAGGCTCTCACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LQLRRWPRNSTS*PFPGTDRLSQW Trigger: CCACTGTGAGAGCCTGTCAGTCCCTGGGAACGGGCATGATGTTGAGTTCCTGGGCCACCTCCTCAATTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS TCA 72 bp | AAGTGCCTCAGGACCAGCTTCCGCCACTTCTTCAATTaGGGAGGTGGCCCAGGAACTCAACATCATGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: KCLRTSFRHFFN*GGGPGTQHHAR Trigger: ACGGGCATGATGTTGAGTTCCTGGGCCACCTCCTCAATTGAAGAAGTGGCGGAAGCTGGTCCTGAGGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS CCA 72 bp | GGTTGCCCAGGTAAGGTGTGTCCACTGTCACAAATATaGCCTTGTAGCCCATCTTCTCTGCCTGCCGCACTA | + |
|
Preference number: 6 (lower is better) Translates to: GCPGKVCPLSQI*PCSPSSLPAAL Trigger: TAGTGCGGCAGGCAGAGAAGATGGGCTACAAGGCCATATTTGTGACAGTGGACACACCTTACCTGGGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS CAA 72 bp | CTTCTTGGTGACTTCTCGGTCCTTGTAGATATACAGTaGCAGCCAACGAAGTGCCTCAGGACCAGCTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGDFSVLVDIQ*QPTKCLRTSFR Trigger: GCGGAAGCTGGTCCTGAGGCACTTCGTTGGCTGCAACTGTATATCTACAAGGACCGAGAAGTCACCAAGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
||
| CDS CAA 72 bp | TGGCAGAACATCAATAGTGGCTGGCACCCCATCGAGTaGTCGAGCCCCATGATTCGACACCAAGATCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: WQNINSGWHPIE*SSPMIRHQDPI Trigger: AATGGGATCTTGGTGTCGAATCATGGGGCTCGACAACTCGATGGGGTGCCAGCCACTATTGATGTTCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS CAA 90 bp | CACAATTTCTGGCAGAACATCAATAGTGGCTGGCACCCCATCGAGTaGTCGAGCCCCATGATTCGACACCAAGATCCCATTCAAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: HNFWQNINSGWHPIE*SSPMIRHQDPIQAM Trigger: CATGGCTTGAATGGGATCTTGGTGTCGAATCATGGGGCTCGACAACTCGATGGGGTGCCAGCCACTATTGATGTTCTGCCAGAAATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS TCA 72 bp | ATAGTGGCTGGCACCCCATCGAGTTGTCGAGCCCCATaGTTCGACACCAAGATCCCATTCAAGCCATGTTTA | + |
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Preference number: 6 (lower is better) Translates to: IVAGTPSSCRAP*FDTKIPFKPCL Trigger: TAAACATGGCTTGAATGGGATCTTGGTGTCGAATCATGGGGCTCGACAACTCGATGGGGTGCCAGCCACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS CAA 90 bp | TGTCAGATCTTGGAAACGGCCAAAGGATTTTTCCTCACCAATGTCTaGTCGATGACTTTCACATTCTGGCACCCACTCAGAGCCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: CQILETAKGFFLTNV*SMTFTFWHPLRAMA Trigger: GGCCATGGCTCTGAGTGGGTGCCAGAATGTGAAAGTCATCGACAAGACATTGGTGAGGAAAAATCCTTTGGCCGTTTCCAAGATCTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS GCA 72 bp | CCAGCTGATAGATGGGTCTATTGCTTTAGCCACATATaGAGCAAGTCCACTGTCGTCTCCAAAATTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PADRWVYCFSHI*SKSTVVSKIFL Trigger: GAGGAAAATTTTGGAGACGACAGTGGACTTGCTGCATATGTGGCTAAAGCAATAGACCCATCTATCAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS GCA 72 bp | CCATTTGATATCTTCCCAGCTGATAGATGGGTCTATTaGTTTAGCCACATATGCAGCAAGTCCACTGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: PFDIFPADRWVY*FSHICSKSTVV Trigger: GACGACAGTGGACTTGCTGCATATGTGGCTAAAGCAATAGACCCATCTATCAGCTGGGAAGATATCAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS CAA 72 bp | GTTTCAAAATTTTTCATCCTGAGTTGTGGCGGCAGTTaGAATCTGTTACGCACATCATCCAGACGGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: VSKFFILSCGGS*NLLRTSSRRLP Trigger: GGGCAACCGTCTGGATGATGTGCGTAACAGATTCAAACTGCCGCCACAACTCAGGATGAAAAATTTTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS CAA 72 bp | TTGGAAACGGCCAAAGGATTTTTCCTCACCAATGTCTaGTCGATGACTTTCACATTCTGGCACCCACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LETAKGFFLTNV*SMTFTFWHPLR Trigger: TCTGAGTGGGTGCCAGAATGTGAAAGTCATCGACAAGACATTGGTGAGGAAAAATCCTTTGGCCGTTTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS CCA 72 bp | TCTTCTCAGCCATTTGATATCTTCCCAGCTGATAGATaGGTCTATTGCTTTAGCCACATATGCAGCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSQPFDIFPADR*VYCFSHICSKS Trigger: GGACTTGCTGCATATGTGGCTAAAGCAATAGACCCATCTATCAGCTGGGAAGATATCAAATGGCTGAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS TCA 72 bp | ATCACCTCTCAAAATGCCCTTTGCAACAATTGGCAATaGTGTCAGTCTTCTCAGCCATTTGATATCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ITSQNALCNNWQ*CQSSQPFDIFP Trigger: TGGGAAGATATCAAATGGCTGAGAAGACTGACATCATTGCCAATTGTTGCAAAGGGCATTTTGAGAGGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS CCA 72 bp | AATACAGATGGGAAAATATTGTGCACTGTCAGATCTTaGAAACGGCCAAAGGATTTTTCCTCACCAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: NTDGKILCTVRS*KRPKDFSSPMS Trigger: AGACATTGGTGAGGAAAAATCCTTTGGCCGTTTCCAAGATCTGACAGTGCACAATATTTTCCCATCTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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| CDS GCA 72 bp | TGCTGCAATATTATCAGCCAAAGTTTCTTCATCATTTaGCCCAGACCTGTAATAGTCATATATAGACTTTGG | + |
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Preference number: 6 (lower is better) Translates to: CCNIISQSFFII*PRPVIVIYRLW Trigger: CCAAAGTCTATATATGACTATTACAGGTCTGGGGCAAATGATGAAGAAACTTTGGCTGATAATATTGCAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378789.4 |
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