RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAL (Homo sapiens)

Ensembl gene IDs: ENSG00000084110

Ensembl transcript IDs: ENST00000261208.8, ENST00000538703.5, ENST00000541929.5, ENST00000544080.6, ENST00000546579.1, ENST00000546999.5, ENST00000548636.1, ENST00000548808.1, ENST00000549376.1, ENST00000551562.1, ENST00000552509.5

Found 821 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCAGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGAGACGTGGTCCTCCGTGGCTGCGCT +
Preference number: 1 (lower is better)
Translates to: GQHLLHMLDDPEGFP*CPSSHGDVVLRGCA
Trigger: AGCGCAGCCACGGAGGACCACGTCTCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp CTGCCCATCCTCCCATGGAGACGTGGTCCTCCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCT +
Preference number: 1 (lower is better)
Translates to: LPILPWRRGPPWLRW*RGSQQTRDGTEPCS
Trigger: AGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGGATGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 90 bp GTGCCCTTCAGCACCTCAAGGGTCAGGGCTGCCACAATGTCAGCCTaGCGTGCAATAGCACTGGCTCGCTCTACAGCTTCACAGCCCAGG +
Preference number: 1 (lower is better)
Translates to: VPFSTSRVRAATMSA*RAIALARSTASQPR
Trigger: CCTGGGCTGTGAAGCTGTAGAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGACCCTTGAGGTGCTGAAGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp TCCTCCGTGGCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCAGAAACAAGGGCTGCTGCCGTGCAG +
Preference number: 1 (lower is better)
Translates to: SSVAALVERESTDEG*HRALFSETRAAAVQ
Trigger: CTGCACGGCAGCAGCCCTTGTTTCTGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 90 bp CTTCAGCACCTCAAGGGTCAGGGCTGCCACAATGTCAGCCTGCCGTaGAATAGCACTGGCTCGCTCTACAGCTTCACAGCCCAGGGATGT +
Preference number: 1 (lower is better)
Translates to: LQHLKGQGCHNVSLP*NSTGSLYSFTAQGC
Trigger: ACATCCCTGGGCTGTGAAGCTGTAGAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGACCCTTGAGGTGCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 90 bp GTCAAAGGCTTTGGTGGTGCCCTTCAGCACCTCAAGGGTCAGGGCTaGCACAATGTCAGCCTGCCGTGCAATAGCACTGGCTCGCTCTAC +
Preference number: 1 (lower is better)
Translates to: VKGFGGALQHLKGQG*HNVSLPCNSTGSLY
Trigger: GTAGAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGACCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 90 bp CCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATaGCCTGGCAGGCTGCAAGGAGCTCGATGGCCAGCACTTGCTCCA +
Preference number: 1 (lower is better)
Translates to: PSPAEWLFSGDVETL*PGRLQGARWPALAP
Trigger: TGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp CAACTAGCCCAAGAGCAAGATGAGAGAGTGGGGCAAGGTCTCCACTaGCACCAACGGTTCCTTTCTCTGGGACATAGGGCAGGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: QLAQEQDERVGQGLH*HQRFLSLGHRAGRR
Trigger: CCTCCTGCCTGCCCTATGTCCCAGAGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp TCCAGCGGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTaGCAGGCTGCAAGGAGCTCGATGGCCAGCACTTGCTCCACATGC +
Preference number: 1 (lower is better)
Translates to: SSGVVVFRGRRNSMP*QAARSSMASTCSTC
Trigger: GCATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR TCA 90 bp CCTTGTTCTCAGAAACAAGGGCTGCTGCCGTGCAGTGAGCTATCATaGACCCAGAGTTCAGACCACCTTCAGCCACCAGGAAGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: PCSQKQGLLPCSELS*TQSSDHLQPPGRQA
Trigger: TGCCTGCCTTCCTGGTGGCTGAAGGTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAGAACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: ALQQSAPGHRPSPAE*LFSGDVETLCPGRL
Trigger: CAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR TCA 90 bp TTCGGAGACCACATCTTCCCTTCTCCAACTAGCCCAAGAGCAAGATaGGAGAGTGGGGCAAGGTCTCCACTGGCACCAACGGTTCCTTTC +
Preference number: 1 (lower is better)
Translates to: FGDHIFPSPTSPRAR*ESGARSPLAPTVPF
Trigger: GAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCTAGTTGGAGAAGGGAAGATGTGGTCTCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTaGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCATTTG +
Preference number: 1 (lower is better)
Translates to: SPNWSEEHHETTGGY*LNGSPRMTMHKPHL
Trigger: CAAATGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR GCA 90 bp ATCATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATaGATCCTGGACGCGATCACAGAACCTGTGACTCTCTGCTATTTC +
Preference number: 1 (lower is better)
Translates to: IIHHTMDLWTAAQGV*ILDAITEPVTLCYF
Trigger: GAAATAGCAGAGAGTCACAGGTTCTGTGATCGCGTCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp AGAGAGTGGGGCAAGGTCTCCACTGGCACCAACGGTTCCTTTCTCTaGGACATAGGGCAGGCAGGAGGCATTAAACATTTCTATGACTTG +
Preference number: 1 (lower is better)
Translates to: REWGKVSTGTNGSFL*DIGQAGGIKHFYDL
Trigger: CAAGTCATAGAAATGTTTAATGCCTCCTGCCTGCCCTATGTCCCAGAGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCCCACTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR TCA 90 bp GTATTGCTTTGTGCTAAACTGACTGCCCTCTCATCTGCTACTTCATaGCAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGA +
Preference number: 1 (lower is better)
Translates to: VLLCAKLTALSSATS*QSPLKVLRLRDFGG
Trigger: TCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR GCA 90 bp AGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATA +
Preference number: 1 (lower is better)
Translates to: RSSDSGILVDFLCRN*SEKAVGERGLDSGI
Trigger: TATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp TACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTaGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAG +
Preference number: 1 (lower is better)
Translates to: YFMTKPIKGPQTPGF*WISCAEIAVKRLLE
Trigger: CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR CCA 90 bp TTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTaGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGAAA +
Preference number: 1 (lower is better)
Translates to: FMTKPIKGPQTPGFW*ISCAEIAVKRLLEK
Trigger: TTTCTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR GCA 90 bp TGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATaGTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCCAA +
Preference number: 1 (lower is better)
Translates to: CSEKAVGERGLDSGI*SILYFSMYGAATSQ
Trigger: TTGGGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR TCA 90 bp AGTTTTCACTTCAGTTTCCACCTGACAGGTTGTAAATCTAAAGGGTaGAAACTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGG +
Preference number: 1 (lower is better)
Translates to: SFHFSFHLTGCKSKG*KLYCEIHCSAHFRW
Trigger: CCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAGTTTTCACCCTTTAGATTTACAACCTGTCAGGTGGAAACTGAAGTGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR GCA 90 bp CACTTAGTGTTTATTATATGGCTTCTTAGTGGTGCTGCAAGTTGTTaGTCAAATACCTTTTTGCTCATTCCCAAGGAATGGCCAGAAAAC +
Preference number: 1 (lower is better)
Translates to: HLVFIIWLLSGAASC*SNTFLLIPKEWPEN
Trigger: GTTTTCTGGCCATTCCTTGGGAATGAGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATATAATAAACACTAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548808.1
3UTR-3UTR GCA 90 bp GGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGGTGGTCCTCCGTGGCTaGGCTGGTGGAGAGGGAGTC +
Preference number: 2 (lower is better)
Translates to: GVVVFRGRRNSMPWQAARVVLRG*AGGEGV
Trigger: GACTCCCTCTCCACCAGCGCAGCCACGGAGGACCAC...CCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGCCTCCCATGGAGACGTaGTCCTCCGTGGCTGCGCTG +
Preference number: 2 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSPPMET*SSVAAL
Trigger: CAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGG...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCAGCCCAAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: AALVERESTDEGWHRALFSPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCT...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGCTGCCCATCCTCCCATaGAGACGTGGTCCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSLPILP*RRGPPW
Trigger: CCACGGAGGACCACGTCTCCATGGGAGGATGGGCAG...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp GGCTGCCTCGATGTCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACGCTGCTGCCGTGCAGTaGGCTATCATGAACCCAGAG +
Preference number: 2 (lower is better)
Translates to: GCLDVRGHEAIFYPGPYNAAAVQ*AIMNPE
Trigger: CTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGC...GTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATCGAGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp TCGATGGCCAGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTCAAAGGCTTTGGTGGTaGCCTTCAGCACCTCAAGGG +
Preference number: 2 (lower is better)
Translates to: SMASTCSTCSMTLRAFLAQRLWW*PSAPQG
Trigger: CCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTG...AGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp AGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTGCCCATCCTGGGCAAGGTCTCCACTaGCACCAACGGTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: STCSTCSMTLRAFLAAHPGQGLH*HQRFLS
Trigger: AGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCC...AGGATGGGCAGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCTGTCAAAGGCTTTGGTaGTGCCCTTCAGCACCTCAA +
Preference number: 2 (lower is better)
Translates to: AALVERESTDEGWHRALFCQRLW*CPSAPQ
Trigger: TTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACA...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp AGGAAGGCAGGCAGCTCACTGAGGGAGGGATTGCAGAGCCGCTCGATTCTTCTCAGGGATGTGATCATCTaGGTCCCATTGATGAGTGCC +
Preference number: 2 (lower is better)
Translates to: RKAGSSLREGLQSRSILLRDVII*VPLMSA
Trigger: GGCACTCATCAATGGGACGCAGATGATCACATCCCT...GAGAAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp AGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGACGCTCAGAAACAAGGGCTaGTGCCGTGCAGTGAGCTAT +
Preference number: 2 (lower is better)
Translates to: RAHQVIDLLQRSGCFQGTLRNKG*CRAVSY
Trigger: ATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAG...CGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWSTDEG*HRALFS
Trigger: TGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGA...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp ATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCCTCCGTGGCTGCGCTaGTGGAGAGGGAGTCAACAG +
Preference number: 2 (lower is better)
Translates to: IFYPGPYNRAHQVIDLLQPPWLR*WRGSQQ
Trigger: CTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGG...CTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp AGGAAGGCAGGCAGCTCACTGAGGGAGGGATTGCAGAGCCGCTCGATTCTTCTCATTTCTGATGGGTGGTaGTCTGAGTCCAAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: RKAGSSLREGLQSRSILLISDGW*SESKSD
Trigger: GTCACTCTTGGACTCAGATCACCACCCATCAGAAAT...GAGAAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp CTGGCAGGCTGCAAGGAGCTCGATGGCCAGCACTTGCTCCACATGCTCGATGACCGATCACAGAACCTGTaGCTCTCTGCTATTTCTGAT +
Preference number: 2 (lower is better)
Translates to: LAGCKELDGQHLLHMLDDRSQNL*LSAISD
Trigger: ATCAGAAATAGCAGAGAGTCACAGGTTCTGTGATCG...GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAGCCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGTGCAGTGAGCTATCATaGACCCAGAGTTCAGACCAC +
Preference number: 2 (lower is better)
Translates to: SGAMKRSFIQGLTTERTRCSELS*TQSSDH
Trigger: GTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCA...CCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 2 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR GCA 90 bp TCGATGGCCAGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTAGGGATGTGATCATCTaGGTCCCATTGATGAGTGCC +
Preference number: 2 (lower is better)
Translates to: SMASTCSTCSMTLRAFLARDVII*VPLMSA
Trigger: GGCACTCATCAATGGGACGCAGATGATCACATCCCT...AGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp AGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGACGTGTCAAAGGCTTTGGTaGTGCCCTTCAGCACCTCAA +
Preference number: 2 (lower is better)
Translates to: RAHQVIDLLQRSGCFQGTCQRLW*CPSAPQ
Trigger: TTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACA...CGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGACAGTGTCAAAGGCTTTaGTGGTGCCCTTCAGCACCT +
Preference number: 2 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGQCQRL*WCPSAP
Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTG...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CAA 90 bp TTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTaGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAA +
Preference number: 2 (lower is better)
Translates to: LQQSAPGHRPSPAEW*FSGDVETLCPGRLQ
Trigger: TTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATATACCTGGTGGGTCTTaGACCACGACAACAGGAACA +
Preference number: 2 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNIPGGS*TTTTGT
Trigger: TGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTAT...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR GCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCGGCCTTGCACATATATaGACACACTGGTGCAAAGTC +
Preference number: 2 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSGLAHI*THWCKV
Trigger: GACTTTGCACCAGTGTGTGCATATATGTGCAAGGCC...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR GCA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGAGGGTCTCCAGGGAAATaGCACTGTATCCTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGGSPGK*HCILWL
Trigger: TAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCC...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATTGCTTTGTGCTAAACTaGCTGCCCTCTCATCTGCTA +
Preference number: 2 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNCFVLN*LPSHLL
Trigger: TAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCA...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR TCA 90 bp CCAGCGGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCGATTCTTCTCTCACTaGTTGCAGCAAGTTCATGGA +
Preference number: 2 (lower is better)
Translates to: PAEWLFSGDVETLCPGRLRFFSH*LQQVHG
Trigger: TCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCG...CAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 2 (lower is better)
Translates to: ALQQSAPGHRPSPAEWLFDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...AAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp TCGATGGCCAGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTCAGACTCCGGGATTTTaGTGGATTTCTTGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: SMASTCSTCSMTLRAFLAQTPGF*WISCAE
Trigger: TTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTG...AGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTGCTTTGTGCTAAACTaGCTGCCCTCTCATCTGCTA +
Preference number: 2 (lower is better)
Translates to: ALQQSAPGHRPSPAEWLFCFVLN*LPSHLL
Trigger: TAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCA...AAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCAGACCCATCCTTCATCTaGACAGATACACTTAAGCCA +
Preference number: 2 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSDPSFI*TDTLKP
Trigger: TGGCTTAAGTGTATCTGTCCAGATGAAGGATGGGTC...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR TCA 90 bp TGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGATTCTTCTCTCACTaGTTGCAGCAAGTTCATGGA +
Preference number: 2 (lower is better)
Translates to: WLFSGDVETLCPGRLQGARFFSH*LQQVHG
Trigger: TCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCG...AGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp AGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGACGTTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: RAHQVIDLLQRSGCFQGTFLCRN*SEKAVG
Trigger: TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAA...CGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp TCGATGGCCAGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTTTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: SMASTCSTCSMTLRAFLAFLCRN*SEKAVG
Trigger: TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAA...AGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATCCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACG +
Preference number: 2 (lower is better)
Translates to: EKAVGERGLDSGICSILYPWLRW*RGSQQT
Trigger: CGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGG...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp TTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGAGCCCAAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: LKVLRLRDFGGFLVQKLQSPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCT...CTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCAGGCAGGCAGCTCACTaGGGGAGGGATTGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: DSGICSILYFSMYGAATSRQAAH*GRDCRA
Trigger: GGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCT...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGGATGTTCTTCACAAATaGTATTGTATCATTCACCAC +
Preference number: 2 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWDVLHK*YCIIHH
Trigger: GTGGTGAATGATACAATAGCATTTGTGAAGAACATC...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTCATAGGATTATCTGTTaGGCTGTTCAGTTCTGTGGT +
Preference number: 2 (lower is better)
Translates to: ALQQSAPGHRPSPAEWLFHRIIC*AVQFCG
Trigger: ACCACAGAACTGAACAGCGCAACAGATAATCCTATG...AAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGAACTCCGGGATTTTGGTaGATTTCTTGTGCAGAAATT +
Preference number: 2 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGTPGFW*ISCAEI
Trigger: AATTTCTGCACAAGAAATCCACCAAAATCCCGGAGT...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp TTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGCTGCAAGGAGCTCGATaGCCAGCACTTGCTCCACAT +
Preference number: 2 (lower is better)
Translates to: LKVLRLRDFGGFLVQKLQLQGAR*PALAPH
Trigger: ATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAG...CTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CAA 90 bp TTGAGGGTCTCCAGGGAAATGCCACTGTATCCTTTGGCTAAGACATaGATCCTTAAAGCCAAGAGCATCCGACACCTCTCAGGACTTAGT +
Preference number: 2 (lower is better)
Translates to: LRVSREMPLYPLAKT*ILKAKSIRHLSGLS
Trigger: ACTAAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp TGGCCAAGTAGTCTAGGGCTTTGGCTGGGTATTCACCATGGAAGTTTCCTCCAGCTTTGGCTAAGACATTaGTCCTTAAAGCCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: WPSSLGLWLGIHHGSFLQLWLRH*SLKPRA
Trigger: TGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAG...CTGGAGGAAACTTCCATGGTGAATACCCAGCCAAAGCCCTAGACTACTTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544080.6
3UTR-3UTR GCA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 2 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGCAAAGGCTTTGGTGGTaGCCTTCAGCACCTCAAGGG +
Preference number: 2 (lower is better)
Translates to: SEKAVGERGLDSGICSILQRLWW*PSAPQG
Trigger: CCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTG...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATCCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGA +
Preference number: 2 (lower is better)
Translates to: EKAVGERGLDSGICSILYPEGFP*CPSSHG
Trigger: TCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGG...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CAA 90 bp TCTATGACTTGTTTGAGGGTCTCCAGGGAAATGCCACTGTATCCTTaGGCTAAGACATTGATCCTTAAAGCCAAGAGCATCCGACACCTC +
Preference number: 2 (lower is better)
Translates to: SMTCLRVSREMPLYP*AKTLILKAKSIRHL
Trigger: GAGGTGTCGGATGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCCTCAAACAAGTCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 2 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR GCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGCTCAGAAACAAGGGCTaGTGCCGTGCAGTGAGCTAT +
Preference number: 2 (lower is better)
Translates to: SEKAVGERGLDSGICSILLRNKG*CRAVSY
Trigger: ATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAG...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTTGCTTTGTGCTAAACTaGCTGCCCTCTCATCTGCTA +
Preference number: 2 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCCFVLN*LPSHLL
Trigger: TAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCA...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCGCCACAATGTCAGCCTaGCGTGCAATAGCACTGGCT +
Preference number: 2 (lower is better)
Translates to: DSGICSILYFSMYGAATSATMSA*RAIALA
Trigger: AGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGC...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATATCCCATGTAAGCATTTaGGGGATACGTGTAGTGATA +
Preference number: 2 (lower is better)
Translates to: AVVFRATVSDHLKGLAHISHVSI*GIRVVI
Trigger: TATCACTACACGTATCCCCCAAATGCTTACATGGGA...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CCA 90 bp CGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGCCAATGGCCAAGACTGGTTTCAATCCATaGGCTTCTAGCACGTATTTA +
Preference number: 2 (lower is better)
Translates to: RSILLSLIAASSWMPMAKTGFNP*ASSTYL
Trigger: TAAATACGTGCTAGAAGCCCATGGATTGAAACCAGT...CTTGGCCATTGGCATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGTGCTTTGTGCTAAACTaGCTGCCCTCTCATCTGCTA +
Preference number: 2 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVCFVLN*LPSHLL
Trigger: TAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCA...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR TCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCATGGAGAAAGAGGTCTTaGTTCTGGAATATGCTCCAT +
Preference number: 2 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAWRKRS*FWNMLH
Trigger: ATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCA...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
3UTR-3UTR TCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGTGGAGAAAGAGGTCTTaGTTCTGGAATATGCTCCAT +
Preference number: 2 (lower is better)
Translates to: PGFWWISCAEIAVKRLLEWRKRS*FWNMLH
Trigger: ATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCA...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp CCATTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACGCTCAAATACCTTTTTaGTCATTCCCAAGGAATGGC +
Preference number: 2 (lower is better)
Translates to: PFLFLILRYSTVGCTLVHAQIPF*SFPRNG
Trigger: GCCATTCCTTGGGAATGAGCAAAAAGGTATTTGAGC...GTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548808.1
3UTR-3UTR TCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCTGCAGTGAGCTATCATaGACCCAGAGTTCAGACCAC +
Preference number: 2 (lower is better)
Translates to: DSGICSILYFSMYGAATSCSELS*TQSSDH
Trigger: GTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCA...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFFLCRN*SEKAVG
Trigger: TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAA...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCTCCCATGTAAGCATTTaGGGGATACGTGTAGTGATA +
Preference number: 2 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVSHVSI*GIRVVI
Trigger: TATCACTACACGTATCCCCCAAATGCTTACATGGGA...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTGGGCAAGGTCTCCACTaGCACCAACGGTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCGQGLH*HQRFLS
Trigger: AGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCC...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR TCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCACTTCAGTTTCCACCTaGCAGGTTGTAAATCTAAAG +
Preference number: 2 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVTSVST*QVVNLK
Trigger: CTTTAGATTTACAACCTGTCAGGTGGAAACTGAAGT...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR TCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCATTTCTGATGGGTGGTaGTCTGAGTCCAAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: DSGICSILYFSMYGAATSISDGW*SESKSD
Trigger: GTCACTCTTGGACTCAGATCACCACCCATCAGAAAT...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTCAGACTCCGGGATTTTaGTGGATTTCTTGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFQTPGF*WISCAE
Trigger: TTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTG...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
3UTR-3UTR CCA 90 bp CCATTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACCTCATTCCCAAGGAATaGCCAGAAAACAATAGAATA +
Preference number: 2 (lower is better)
Translates to: PFLFLILRYSTVGCTLVHLIPKE*PENNRI
Trigger: TATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAG...GTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
3UTR-3UTR TCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTCATCTGCTACTTCATaGCAAAGCCCATTAAAGGTC +
Preference number: 2 (lower is better)
Translates to: EKAVGERGLDSGICSILYSSATS*QSPLKV
Trigger: GACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGA...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR GCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTAGAAACAAGGGCTGCTaGCGTGCAGTGAGCTATCAT +
Preference number: 2 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCRNKGC*RAVSYH
Trigger: ATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCT...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCAGGCACATACAATTGTaGTTATTCTTCTCACCCTTA +
Preference number: 2 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVRHIQL*LFFSPL
Trigger: TAAGGGTGAGAAGAATAACCACAATTGTATGTGCCT...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGACTGGTTTCAATCCATaGGCTTCTAGCACGTATTTA +
Preference number: 2 (lower is better)
Translates to: SEKAVGERGLDSGICSILTGFNP*ASSTYL
Trigger: TAAATACGTGCTAGAAGCCCATGGATTGAAACCAGT...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CAA 90 bp GGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTaGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATT +
Preference number: 2 (lower is better)
Translates to: GFWWISCAEIAVKRL*EKEVLILEYAPFCI
Trigger: AATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR CAA 90 bp ATATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTaGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAA +
Preference number: 2 (lower is better)
Translates to: IWLLSGAASCCSNTF*LIPKEWPENNRIRQ
Trigger: TTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
3UTR-3UTR TCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCTCATCTGCTACTTCATaGCAAAGCCCATTAAAGGTC +
Preference number: 2 (lower is better)
Translates to: DSGICSILYFSMYGAATSSSATS*QSPLKV
Trigger: GACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGA...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGAGGCACATACAATTGTaGTTATTCTTCTCACCCTTA +
Preference number: 2 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVRHIQL*LFFSPL
Trigger: TAAGGGTGAGAAGAATAACCACAATTGTATGTGCCT...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATACTCCGGGATTTTGGTaGATTTCTTGTGCAGAAATT +
Preference number: 2 (lower is better)
Translates to: EKAVGERGLDSGICSILYTPGFW*ISCAEI
Trigger: AATTTCTGCACAAGAAATCCACCAAAATCCCGGAGT...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR GCA 72 bp TGCCCATCCTCCCATGGAGACGTGGTCCTCCGTGGCTaGGCTGGTGGAGAGGGAGTCAACAGACGAGGGATG +
Preference number: 3 (lower is better)
Translates to: CPSSHGDVVLRG*AGGEGVNRRGM
Trigger: CATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGGATGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp CTCCCATGGAGACGTGGTCCTCCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACGAGGGATGGCACAGAG +
Preference number: 3 (lower is better)
Translates to: LPWRRGPPWLRW*RGSQQTRDGTE
Trigger: CTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCTCCATGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp ATCCTCCCATGGAGACGTGGTCCTCCGTGGCTGCGCTaGTGGAGAGGGAGTCAACAGACGAGGGATGGCACA +
Preference number: 3 (lower is better)
Translates to: ILPWRRGPPWLR*WRGSQQTRDGT
Trigger: TGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 72 bp CTCAAGGGTCAGGGCTGCCACAATGTCAGCCTGCCGTaGAATAGCACTGGCTCGCTCTACAGCTTCACAGCC +
Preference number: 3 (lower is better)
Translates to: LKGQGCHNVSLP*NSTGSLYSFTA
Trigger: GGCTGTGAAGCTGTAGAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGACCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 72 bp TTTGGTGGTGCCCTTCAGCACCTCAAGGGTCAGGGCTaGCACAATGTCAGCCTGCCGTGCAATAGCACTGGC +
Preference number: 3 (lower is better)
Translates to: FGGALQHLKGQG*HNVSLPCNSTG
Trigger: GCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGACCCTTGAGGTGCTGAAGGGCACCACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 72 bp TTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGAGACGTGGTCCTCCGT +
Preference number: 3 (lower is better)
Translates to: LLHMLDDPEGFP*CPSSHGDVVLR
Trigger: ACGGAGGACCACGTCTCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGATCATCTGCGTCCCATaGATGAGTGCCAGGCCCTCT +
Preference number: 3 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWIICVP*MSARPS
Trigger: AGAGGGCCTGGCACTCATCAATGGGACGCAGATGAT...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 72 bp AGCACCTCAAGGGTCAGGGCTGCCACAATGTCAGCCTaGCGTGCAATAGCACTGGCTCGCTCTACAGCTTCA +
Preference number: 3 (lower is better)
Translates to: STSRVRAATMSA*RAIALARSTAS
Trigger: TGAAGCTGTAGAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGACCCTTGAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 72 bp GCGGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATaGCCTGGCAGGCTGCAAGGAGCTCGATGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: AEWLFSGDVETL*PGRLQGARWPA
Trigger: TGCTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCAGAAACAAGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: AALVERESTDEG*HRALFSETRAA
Trigger: AGCAGCCCTTGTTTCTGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp AGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGATCATCTGCGTCCCATaGATGAGTGCCAGGCCCTCT +
Preference number: 3 (lower is better)
Translates to: RALQQSAPGHRPSPAEWLIICVP*MSARPS
Trigger: AGAGGGCCTGGCACTCATCAATGGGACGCAGATGAT...CAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp AGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTGCCCATCCTTCAGTGTCAAAGGCTTaGGTGGTGCCCTTCAGCACC +
Preference number: 3 (lower is better)
Translates to: STCSTCSMTLRAFLAAHPSVSKA*VVPFST
Trigger: GGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGA...AGGATGGGCAGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR TCA 72 bp AATCCAGCATTCCCCAAACTGGAGCGAAGAGCACCATaGGACCACTGGGGGTTACTGGCTCAATGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: NPAFPKLERRAP*DHWGLLAQWQP
Trigger: GGGCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGAATGCTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR GCA 72 bp CACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATaGATCCTGGACGCGATCACAGAACCTGTGACTCTC +
Preference number: 3 (lower is better)
Translates to: HTMDLWTAAQGV*ILDAITEPVTL
Trigger: GAGAGTCACAGGTTCTGTGATCGCGTCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCTCAGACTCCGGGATTTaGGTGGATTTCTTGTGCAGA +
Preference number: 3 (lower is better)
Translates to: AALVERESTDEGWHRALFSDSGI*VDFLCR
Trigger: TCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCAAAAGCAACTTCAATTaGCCCACGGTGAGGTCGAAG +
Preference number: 3 (lower is better)
Translates to: AALVERESTDEGWHRALFKSNFN*PTVRSK
Trigger: CTTCGACCTCACCGTGGGCAAATTGAAGTTGCTTTT...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 72 bp CGCTCTACAGCTTCACAGCCCAGGGATGTGATCATCTaGGTCCCATTGATGAGTGCCAGGCCCTCTTTTGGT +
Preference number: 3 (lower is better)
Translates to: RSTASQPRDVII*VPLMSARPSFG
Trigger: ACCAAAAGAGGGCCTGGCACTCATCAATGGGACGCAGATGATCACATCCCTGGGCTGTGAAGCTGTAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp TGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTaGCTCAATGGCAGCCCACGGATGACAATGCACAAA +
Preference number: 3 (lower is better)
Translates to: WSEEHHETTGGY*LNGSPRMTMHK
Trigger: TTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR CCA 72 bp GTCGAAGAGCATGAATGTCAGTGTCAAAGGCTTTGGTaGTGCCCTTCAGCACCTCAAGGGTCAGGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: VEEHECQCQRLW*CPSAPQGSGLP
Trigger: TGGCAGCCCTGACCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGACATTCATGCTCTTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp GAGGTCGAAGAGCATGAATGTCAGTGTCAAAGGCTTTaGTGGTGCCCTTCAGCACCTCAAGGGTCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: EVEEHECQCQRL*WCPSAPQGSGL
Trigger: CAGCCCTGACCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGACATTCATGCTCTTCGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR GCA 72 bp GAAGAGCATGAATGTCAGTGTCAAAGGCTTTGGTGGTaGCCTTCAGCACCTCAAGGGTCAGGGCTGCCACAA +
Preference number: 3 (lower is better)
Translates to: EEHECQCQRLWW*PSAPQGSGLPQ
Trigger: TTGTGGCAGCCCTGACCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGACATTCATGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp GGCAAGGTCTCCACTGGCACCAACGGTTCCTTTCTCTaGGACATAGGGCAGGCAGGAGGCATTAAACATTTC +
Preference number: 3 (lower is better)
Translates to: GKVSTGTNGSFL*DIGQAGGIKHF
Trigger: GAAATGTTTAATGCCTCCTGCCTGCCCTATGTCCCAGAGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp CAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCT +
Preference number: 3 (lower is better)
Translates to: QSAPGHRPSPAE*LFSGDVETLCP
Trigger: AGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp CTGGCAGGCTGCAAGGAGCTCGATGGCCAGCACTTGCTCCACATGCTCGATGACTCCTTCAGCCTAGTATaGCTTTGTGCTAAACTGACT +
Preference number: 3 (lower is better)
Translates to: LAGCKELDGQHLLHMLDDSFSLV*LCAKLT
Trigger: AGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGA...GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAGCCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR TCA 72 bp GCCTTGTTCTCAGAAACAAGGGCTGCTGCCGTGCAGTaGGCTATCATGAACCCAGAGTTCAGACCACCTTCA +
Preference number: 3 (lower is better)
Translates to: ALFSETRAAAVQ*AIMNPEFRPPS
Trigger: TGAAGGTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAGAACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTCCTTCAGCCTAGTATaGCTTTGTGCTAAACTGACT +
Preference number: 3 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWSFSLV*LCAKLT
Trigger: AGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGA...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCAGAGTGAGTGGCCTGTaGAAACTGTTAAGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: AALVERESTDEGWHRALFRVSGL*KLLRKK
Trigger: TTTCTTTCTTAACAGTTTCAACAGGCCACTCACTCT...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544080.6
3UTR-3UTR CAA 90 bp ATGAGAGAGTGGGGCAAGGTCTCCACTGGCACCAACGGTTCCTTTCTCTGGGACTTGGAGAAAGAGGTCTaGATTCTGGAATATGCTCCA +
Preference number: 3 (lower is better)
Translates to: MREWGKVSTGTNGSFLWDLEKEV*ILEYAP
Trigger: TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA...GTCCCAGAGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCCCACTCTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTAAAAGCAACTTCAATTaGCCCACGGTGAGGTCGAAG +
Preference number: 3 (lower is better)
Translates to: ALQQSAPGHRPSPAEWLFKSNFN*PTVRSK
Trigger: CTTCGACCTCACCGTGGGCAAATTGAAGTTGCTTTT...AAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR TCA 72 bp CCACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATaGCAATGCACAAACCTCATTTGTGTGTGTTCACAT +
Preference number: 3 (lower is better)
Translates to: PLGVTGSMAAHG*QCTNLICVCSH
Trigger: ATGTGAACACACACAAATGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp GCTCGCTCTACAGCTTCACAGCCCAGGGATGTGATCATCTGCGTCCCATTGATGAACAGGCACATACAATaGTGGTTATTCTTCTCACCC +
Preference number: 3 (lower is better)
Translates to: ARSTASQPRDVIICVPLMNRHIQ*WLFFSP
Trigger: GGGTGAGAAGAATAACCACAATTGTATGTGCCTGTT...CATCAATGGGACGCAGATGATCACATCCCTGGGCTGTGAAGCTGTAGAGCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544080.6
3UTR-3UTR CAA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGCATTCCTTATCTCCTTaGCACATGAAACTCCTTGTT +
Preference number: 3 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRHSLSP*HMKLLV
Trigger: AACAAGGAGTTTCATGTGCAAAGGAGATAAGGAATG...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCAGTGTGTGTTCACATTTaGACAAGGAATAGCACCAAG +
Preference number: 3 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSVCVHI*TRNSTK
Trigger: CTTGGTGCTATTCCTTGTCAAAATGTGAACACACAC...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGAAACATTTCTATGACTaGTTTGAGGGTCTCCAGGGA +
Preference number: 3 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSKHFYD*FEGLQG
Trigger: TCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTT...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTaGACAGATACACTTAAGCCATCCCTGAAGGTCCTT +
Preference number: 3 (lower is better)
Translates to: WEAKRSCDPSFI*TDTLKPSLKVL
Trigger: AAGGACCTTCAGGGATGGCTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp AGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGACGATTTTGGTGGATTTCTaGTGCAGAAATTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: RAHQVIDLLQRSGCFQGTILVDF*CRNCSE
Trigger: TTCACTGCAATTTCTGCACAAGAAATCCACCAAAAT...CGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGCTCGATGGCCAGCACTaGCTCCACATGCTCGATGAC +
Preference number: 3 (lower is better)
Translates to: SEKAVGERGLDSGICSILLDGQH*LHMLDD
Trigger: GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAG...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR TCA 72 bp CCAGGGAAATGCCACTGTATCCTTTGGCTAAGACATTaGTCCTTAAAGCCAAGAGCATCCGACACCTCTCAG +
Preference number: 3 (lower is better)
Translates to: PGKCHCILWLRH*SLKPRASDTSQ
Trigger: CTGAGAGGTGTCGGATGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGGATACAGTGGCATTTCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATAATACCTGGTGGGTCTaGAACCACGACAACAGGAAC +
Preference number: 3 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNNTWWV*NHDNRN
Trigger: GTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
3UTR-3UTR CAA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATACTCCCATGTAAGCATTaGGGGGATACGTGTAGTGAT +
Preference number: 3 (lower is better)
Translates to: AVVFRATVSDHLKGLAHILPCKH*GDTCSD
Trigger: ATCACTACACGTATCCCCCAAATGCTTACATGGGAG...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp TCTAGGGCCATGGAAGTTTCCTCCAGAAACTGTCTCTCCCCTATTGGCAAAGACCCTTTGGCTAAGACATaGATCCTTAAAGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: SRAMEVSSRNCLSPIGKDPLAKT*ILKAKS
Trigger: GCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGG...GTCTTTGCCAATAGGGGAGAGACAGTTTCTGGAGGAAACTTCCATGGCCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546999.5
3UTR-3UTR CAA 90 bp CGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGCCAATGGCCAAGACTGTCTCTCCCCTATaGGCAAAGACCATAGGATTA +
Preference number: 3 (lower is better)
Translates to: RSILLSLIAASSWMPMAKTVSPL*AKTIGL
Trigger: TAATCCTATGGTCTTTGCCAATAGGGGAGAGACAGT...CTTGGCCATTGGCATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGAACAGGCACATACAATaGTGGTTATTCTTCTCACCC +
Preference number: 3 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKNRHIQ*WLFFSP
Trigger: GGGTGAGAAGAATAACCACAATTGTATGTGCCTGTT...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp GCTTCTAGCACGTATTTAGCATCAGCCCAGCCACTCTTCGGAGACCACATCTTCATTTTGGTGGATTTCTaGTGCAGAAATTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: ASSTYLASAQPLFGDHIFILVDF*CRNCSE
Trigger: TTCACTGCAATTTCTGCACAAGAAATCCACCAAAAT...GAAGATGTGGTCTCCGAAGAGTGGCTGGGCTGATGCTAAATACGTGCTAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp TTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTCAGACTCCGGGATTTaGGTGGATTTCTTGTGCAGA +
Preference number: 3 (lower is better)
Translates to: LKVLRLRDFGGFLVQKLQSDSGI*VDFLCR
Trigger: TCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA...CTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR CCA 72 bp AAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTaGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: KPIKGPQTPGFW*ISCAEIAVKRL
Trigger: CAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTACATTCCTTATCTCCTTaGCACATGAAACTCCTTGTT +
Preference number: 3 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLHSLSP*HMKLLV
Trigger: AACAAGGAGTTTCATGTGCAAAGGAGATAAGGAATG...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAACTCCCATGTAAGCATTaGGGGGATACGTGTAGTGAT +
Preference number: 3 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQLPCKH*GDTCSD
Trigger: ATCACTACACGTATCCCCCAAATGCTTACATGGGAG...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATAATTACAGAAAGGAGGTaGGTTAATCCCCAAAGATTC +
Preference number: 3 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIITERR*VNPQRF
Trigger: GAATCTTTGGGGATTAACCAACCTCCTTTCTGTAAT...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAACGGTTTCAGACCACTaGAAGGGCCTTGCACATATA +
Preference number: 3 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQTVSDH*KGLAHI
Trigger: TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGT...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTTGGAGAAAGAGGTCTaGATTCTGGAATATGCTCCA +
Preference number: 3 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWLEKEV*ILEYAP
Trigger: TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp TTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGACTGTCTCTCCCCTATaGGCAAAGACCATAGGATTA +
Preference number: 3 (lower is better)
Translates to: LKVLRLRDFGGFLVQKLQTVSPL*AKTIGL
Trigger: TAATCCTATGGTCTTTGCCAATAGGGGAGAGACAGT...CTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR-3UTR CAA 90 bp CCATTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTGCTCAAATACCTTTTaGCTCATTCCCAAGGAATGG +
Preference number: 3 (lower is better)
Translates to: PFLFLILRYSTVGCTLVHCSNTF*LIPKEW
Trigger: CCATTCCTTGGGAATGAGCAAAAAGGTATTTGAGCA...GTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
3UTR-3UTR CAA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGAGAGTGAGTGGCCTGTaGAAACTGTTAAGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: PGFWWISCAEIAVKRLLERVSGL*KLLRKK
Trigger: TTTCTTTCTTAACAGTTTCAACAGGCCACTCACTCT...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
3UTR-3UTR CAA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCTTGGAGAAAGAGGTCTaGATTCTGGAATATGCTCCA +
Preference number: 3 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISLEKEV*ILEYAP
Trigger: TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
3UTR TCA 72 bp GACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTaGAGGCGTGTGCTGTCAGTTACTAATAGAGCTGTG +
Preference number: 3 (lower is better)
Translates to: DLVYSMFPLKFP*RRVLSVTNRAV
Trigger: CACAGCTCTATTAGTAACTGACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGTCCTTCAGCCTAGTATaGCTTTGTGCTAAACTGACT +
Preference number: 3 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVSFSLV*LCAKLT
Trigger: AGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGA...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATATTTTGGTGGATTTCTaGTGCAGAAATTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNILVDF*CRNCSE
Trigger: TTCACTGCAATTTCTGCACAAGAAATCCACCAAAAT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
3UTR TCA 72 bp TTCAGTTTCCACCTGACAGGTTGTAAATCTAAAGGGTaGAAACTCTATTGTGAAATCCACTGTTCGGCCCAT +
Preference number: 3 (lower is better)
Translates to: FSFHLTGCKSKG*KLYCEIHCSAH
Trigger: ATGGGCCGAACAGTGGATTTCACAATAGAGTTTTCACCCTTTAGATTTACAACCTGTCAGGTGGAAACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTATCCTTCAGCCTAGTATaGCTTTGTGCTAAACTGACT +
Preference number: 3 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVSFSLV*LCAKLT
Trigger: AGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGA...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR-3UTR CAA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAAGAGTGAGTGGCCTGTaGAAACTGTTAAGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQRVSGL*KLLRKK
Trigger: TTTCTTTCTTAACAGTTTCAACAGGCCACTCACTCT...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR GCA 72 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTaGACCCTGGTGCACTTAGTGTTTATTATATGGCTT +
Preference number: 3 (lower is better)
Translates to: FLFLILRYSTVG*TLVHLVFIIWL
Trigger: AAGCCATATAATAAACACTAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
3UTR-3UTR CAA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTAGAGTGAGTGGCCTGTaGAAACTGTTAAGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: MITITERRLVNPQRFLICRVSGL*KLLRKK
Trigger: TTTCTTTCTTAACAGTTTCAACAGGCCACTCACTCT...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TGGCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTGAGCAGCCTGTGGGCTaGCTCGATGTCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: WLRWWRGSQQTRDGTEPCEQPVG*LDVRGH
Trigger: ATGGCCCCGGACATCGAGGCAGCCCACAGGCTGCTC...ACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TGGCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTAGGCAGGCAGCTCACTaGGGGAGGGATTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WLRWWRGSQQTRDGTEPCRQAAH*GRDCRA
Trigger: GGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCT...ACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGGCTGCCAGAAAGGCCTaGGGTCTCCCACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWAARKA*GLPPWE
Trigger: CTCCCAGGGTGGGAGACCCCAGGCCTTTCTGGCAGC...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CTGGCAGGCTGCAAGGAGCTCGATGGCCAGCACTTGCTCCACATGCTCGATGACCCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACG +
Preference number: 4 (lower is better)
Translates to: LAGCKELDGQHLLHMLDDPWLRW*RGSQQT
Trigger: CGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGG...GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAGCCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGCAGCCCACAGTGAGCTaGGCGTCCTGGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: RALQQSAPGHRPSPAEWLQPTVS*ASWQGT
Trigger: AGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTG...CAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GCTATCATGAACCCAGAGTTCAGACCACCTTCAGCCACCAGGAAGGCAGGCAGCGCAGGCCCAGGCCCTTaGACCGGCGCACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AIMNPEFRPPSATRKAGSAGPGP*TGAQGS
Trigger: ACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGC...GCTGCCTGCCTTCCTGGTGGCTGAAGGTGGTCTGAACTCTGGGTTCATGATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCGTGGTCCTCCGTGGCTaGGCTGGTGGAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSVVLRG*AGGEGV
Trigger: GACTCCCTCTCCACCAGCGCAGCCACGGAGGACCAC...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCTATGCCCTGGCAGGCTaGAAGGAGCTCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: AALVERESTDEGWHRALFYALAG*KELDGQ
Trigger: CTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATA...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGACGAGACGTGGTCCTCCGTaGCTGCGCTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RAHQVIDLLQRSGCFQGTRRGPP*LRWWRG
Trigger: CCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCT...CGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCCCTCCCATGGAGACGTaGTCCTCCGTGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSPPMET*SSVAAL
Trigger: CAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGG...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCAGGCAGGCAGCTCACTaGGGGAGGGATTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSRQAAH*GRDCRA
Trigger: GGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCT...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCCGGCGCACAAGGAAGTaGGCGTCATCCACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSRRTRK*ASSTEV
Trigger: CACCTCCGTGGATGACGCGCACTTCCTTGTGCGCCG...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGCAGGCCCAGGCCCTTaGACCGGCGCACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNAGPGP*TGAQGS
Trigger: ACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGC...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GCTCGCTCTACAGCTTCACAGCCCAGGGATGTGATCATCTGCGTCCCATTGATGGCAGGCCCAGGCCCTTaGACCGGCGCACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ARSTASQPRDVIICVPLMAGPGP*TGAQGS
Trigger: ACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGC...CATCAATGGGACGCAGATGATCACATCCCTGGGCTGTGAAGCTGTAGAGCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGGTGGTCCTCCGTGGCTaGGCTGGTGGAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSVVLRG*AGGEGV
Trigger: GACTCCCTCTCCACCAGCGCAGCCACGGAGGACCAC...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGGCACCTACCTGCTGCTaGCCCCCTTTCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWAPTCC*PPFFRV
Trigger: GACCCTGAAGAAAGGGGGCCAGCAGCAGGTAGGTGC...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CCA 90 bp AGGAAGGCAGGCAGCTCACTGAGGGAGGGATTGCAGAGCCGCTCGATTCTTCTCGTGGCTACCGGGGTGTaGTCAGCTGCTGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RKAGSSLREGLQSRSILLVATGV*SAAVPL
Trigger: CAAAGGGACAGCAGCTGACCACACCCCGGTAGCCAC...GAGAAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTGCCCATCCTCCGTGTATCTGGGCATaGCTCCGCTGCAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: STCSTCSMTLRAFLAAHPPCIWA*LRCSLR
Trigger: CCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGG...AGGATGGGCAGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGAGTGAGCTGCGCGTCCTaGCAGGGCACTGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGVSCAS*QGTASH
Trigger: ATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCAC...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCTATCATGAACCCAGAGTTCAGACCACCTTCAGCCACCAGGAAGGCAGGCAGCCTGCCCATCCTCCCATaGAGACGTGGTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: AIMNPEFRPPSATRKAGSLPILP*RRGPPW
Trigger: CCACGGAGGACCACGTCTCCATGGGAGGATGGGCAG...GCTGCCTGCCTTCCTGGTGGCTGAAGGTGGTCTGAACTCTGGGTTCATGATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCCGTCATCCACGGAGGTaGAGCCACCATTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSRHPRR*SHHCRA
Trigger: AGCCCGACAATGGTGGCTTCACCTCCGTGGATGACG...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGCGTCATCCACGGAGGTaGAGCCACCATTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RALQQSAPGHRPSPAEWLRHPRR*SHHCRA
Trigger: AGCCCGACAATGGTGGCTTCACCTCCGTGGATGACG...CAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCAAGGCAGGCAGCTCACTaGGGGAGGGATTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSRQAAH*GRDCRA
Trigger: GGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCT...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp GTCAGGGCTGCCACAATGTCAGCCTGCCGTGCAATAGCACTGGCTCGCTCTACAGCTGCTGCCGTGCAGTaGGCTATCATGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: VRAATMSACRAIALARSTAAAVQ*AIMNPE
Trigger: CTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGC...TGTAGAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CTGGCAGGCTGCAAGGAGCTCGATGGCCAGCACTTGCTCCACATGCTCGATGACAATGTCAGCCTGCCGTaGAATAGCACTGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LAGCKELDGQHLLHMLDDNVSLP*NSTGSL
Trigger: GAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATT...GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAGCCTGCCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CTGGCAGGCTGCAAGGAGCTCGATGGCCAGCACTTGCTCCACATGCTCGATGACGCCACAATGTCAGCCTaGCGTGCAATAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LAGCKELDGQHLLHMLDDATMSA*RAIALA
Trigger: AGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGC...GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAGCCTGCCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TGGCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTCAAAGGCTTTGGTGGTaGCCTTCAGCACCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: WLRWWRGSQQTRDGTEPCQRLWW*PSAPQG
Trigger: CCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTG...ACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGGAGCAGCCTGTGGGCTaGCTCGATGTCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEEQPVG*LDVRGH
Trigger: ATGGCCCCGGACATCGAGGCAGCCCACAGGCTGCTC...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGGCTGCCAGAAAGGCCTaGGGTCTCCCACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEAARKA*GLPPWE
Trigger: CTCCCAGGGTGGGAGACCCCAGGCCTTTCTGGCAGC...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGGTGGCTACCGGGGTGTaGTCAGCTGCTGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRVATGV*SAAVPL
Trigger: CAAAGGGACAGCAGCTGACCACACCCCGGTAGCCAC...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGCGTGCACCGTGTATCTaGGCATGGCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVVVFRGRRNSMPWQAARRAPCI*AWLRCS
Trigger: GCTGCAGCGGAGCCATGCCCAGATACACGGTGCACG...CCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCCTGCAAGGAGCTCGATaGCCAGCACTTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: AALVERESTDEGWHRALFLQGAR*PALAPH
Trigger: ATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAG...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATACCAGCCAGCCCACAGTaGGCTGCGCGTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIPASPQ*AARPGR
Trigger: CCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGG...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGGTCCCTTTCCCAAGTTaGCCAGATCCTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWVPFPS*PDPPWS
Trigger: TGACCACGGAGGATCTGGTCAACTTGGGAAAGGGAC...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCGAGCGAAGAGCACCATaGGACCACTGGGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSERRAP*DHWGLL
Trigger: CAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTC...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCCTTTCCATCCAGACCTaGTGCCAGAAAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSLSIQT*CQKGLG
Trigger: CCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGAAAG...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GTCAGGGCTGCCACAATGTCAGCCTGCCGTGCAATAGCACTGGCTCGCTCTACACATTCCCCACGTACGTaGACCGTGTATCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: VRAATMSACRAIALARSTHSPRT*TVYLGM
Trigger: CATGCCCAGATACACGGTGCACGTACGTGGGGAATG...TGTAGAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GTCAGGGCTGCCACAATGTCAGCCTGCCGTGCAATAGCACTGGCTCGCTCTACAGCAGCGCAAGGTGTATaGATCCTGGACGCGATCACA +
Preference number: 4 (lower is better)
Translates to: VRAATMSACRAIALARSTAAQGV*ILDAIT
Trigger: TGTGATCGCGTCCAGGATGCATACACCTTGCGCTGC...TGTAGAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGCAGCCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGACGGAGGGCTTTCCTTGCTaGCCATCCTCCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: RAHQVIDLLQRSGCFQGTEGFPC*PSSHGD
Trigger: GTCTCCATGGGAGGATGGGCAGCAAGGAAAGCCCTC...CGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GCTATCATGAACCCAGAGTTCAGACCACCTTCAGCCACCAGGAAGGCAGGCAGCCCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: AIMNPEFRPPSATRKAGSPEGFP*CPSSHG
Trigger: TCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGG...GCTGCCTGCCTTCCTGGTGGCTGAAGGTGGTCTGAACTCTGGGTTCATGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATTATGCCCTGGCAGGCTaGAAGGAGCTCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNYALAG*KELDGQ
Trigger: CTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATA...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TGGCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTCAGTGTCAAAGGCTTTaGTGGTGCCCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: WLRWWRGSQQTRDGTEPCQCQRL*WCPSAP
Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTG...ACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TGGCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTCCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTA +
Preference number: 4 (lower is better)
Translates to: WLRWWRGSQQTRDGTEPCPSPAE*LFSGDV
Trigger: TACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGG...ACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCACCAGCCAGCCCACAGTaGGCTGCGCGTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAPASPQ*AARPGR
Trigger: CCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGG...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTCCAGCCAGCCCACAGTaGGCTGCGCGTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFPASPQ*AARPGR
Trigger: CCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGG...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TCGATGGCCAGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTGTCCCTTTCCCAAGTTaGCCAGATCCTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SMASTCSTCSMTLRAFLAVPFPS*PDPPWS
Trigger: TGACCACGGAGGATCTGGTCAACTTGGGAAAGGGAC...AGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp ATGAGAGAGTGGGGCAAGGTCTCCACTGGCACCAACGGTTCCTTTCTCTGGGACAGCCCAAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: MREWGKVSTGTNGSFLWDSPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCT...GTCCCAGAGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCCCACTCTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATTCCATCCAGACCTGCTaGCAGAAAGGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNSIQTC*QKGLGS
Trigger: AGACCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGA...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATCTTTCCATCCAGACCTaGTGCCAGAAAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNLSIQT*CQKGLG
Trigger: CCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGAAAG...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCAGAGGGGAGAGCTTTATaGAGGAGTGGCTACCGGGGT +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSEGRAL*RSGYRG
Trigger: ACCCCGGTAGCCACTCCTGCATAAAGCTCTCCCCTC...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GGCTGCCTCGATGTCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACGCCACAATGTCAGCCTaGCGTGCAATAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GCLDVRGHEAIFYPGPYNATMSA*RAIALA
Trigger: AGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGC...GTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATCGAGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGGTGGTCCTCCGTGGCTaGGCTGGTGGAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: IFYPGPYNRAHQVIDLLQVVLRG*AGGEGV
Trigger: GACTCCCTCTCCACCAGCGCAGCCACGGAGGACCAC...CTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCGGGCAAGGTCTCCACTaGCACCAACGGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSGQGLH*HQRFLS
Trigger: AGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCC...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGACGGGGCAAGGTCTCCACTaGCACCAACGGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RAHQVIDLLQRSGCFQGTGQGLH*HQRFLS
Trigger: AGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCC...CGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCTCATTCACCACACCATaGACCTGTGGACAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSSFTTP*TCGQQR
Trigger: GCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATGA...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TGGCCAAGTAGTCTAGGGCTTTGGCTGGGTATTCACCATGGAAGTTTCCTCCAGCCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACG +
Preference number: 4 (lower is better)
Translates to: WPSSLGLWLGIHHGSFLQPWLRW*RGSQQT
Trigger: CGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGG...CTGGAGGAAACTTCCATGGTGAATACCCAGCCAAAGCCCTAGACTACTTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGAAGACGTGGTCCTCCGTaGCTGCGCTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGRRGPP*LRWWRG
Trigger: CCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCT...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGACCTCCCATGGAGACGTaGTCCTCCGTGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGPPMET*SSVAAL
Trigger: CAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGG...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGCTGCAAGGAGCTCGATaGCCAGCACTTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRLQGAR*PALAPH
Trigger: ATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAG...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATTGCTGTTCTTGTCCCTaGTGGCACCTACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNCCSCP*WHLPAA
Trigger: AGCAGCAGGTAGGTGCCATCAGGGACAAGAACAGCA...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCCAGCCAGCCCACAGTaGGCTGCGCGTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISPASPQ*AARPGR
Trigger: CCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGG...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCTGTCGGGCTTATTCTTaGTATAGCGCCTCACGGCCT +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSCRAYS*YSASRP
Trigger: AGGCCGTGAGGCGCTATATCAAGAATAAGCCCGACA...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCAGTCCCTTTCCCAAGTTaGCCAGATCCTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSVPFPS*PDPPWS
Trigger: TGACCACGGAGGATCTGGTCAACTTGGGAAAGGGAC...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGGCTGCTGCCGTGCAGTaGGCTATCATGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEAAAVQ*AIMNPE
Trigger: CTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGC...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGAGAAACAAGGGCTGCTaGCGTGCAGTGAGCTATCAT +
Preference number: 4 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWRNKGC*RAVSYH
Trigger: ATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCT...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTGCCCATCCTCTCAGAAACAAGGGCTaGTGCCGTGCAGTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: STCSTCSMTLRAFLAAHPLRNKG*CRAVSY
Trigger: ATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAG...AGGATGGGCAGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATAGCTGCCAGAAAGGCCTaGGGTCTCCCACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIAARKA*GLPPWE
Trigger: CTCCCAGGGTGGGAGACCCCAGGCCTTTCTGGCAGC...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGAACGGTTCCTTTCTCTaGGACATAGGGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRNGSFL*DIGQAG
Trigger: TCCTGCCTGCCCTATGTCCCAGAGAAAGGAACCGTT...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGAACGGTTCCTTTCTCTaGGACATAGGGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RALQQSAPGHRPSPAEWLNGSFL*DIGQAG
Trigger: TCCTGCCTGCCCTATGTCCCAGAGAAAGGAACCGTT...CAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGGCAAGGTCTCCACTaGCACCAACGGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNGQGLH*HQRFLS
Trigger: AGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCC...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGATCATTCACCACACCATaGACCTGTGGACAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGSFTTP*TCGQQR
Trigger: GCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATGA...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AAAGCCAAGAGCATCCGACACCTCTCAGGACTTAGTGGTTTCCCAACACCTGAACCTCCGTGGCTGCGCTaGTGGAGAGGGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: KAKSIRHLSGLSGFPTPEPPWLR*WRGSQQ
Trigger: CTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGG...TTCAGGTGTTGGGAAACCACTAAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGACGTGGTCCTCCGTaGCTGCGCTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLRRGPP*LRWWRG
Trigger: CCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCT...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGCCAATGGCCAAGCTGCCCATCCTCCCATaGAGACGTGGTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RSILLSLIAASSWMPMAKLPILP*RRGPPW
Trigger: CCACGGAGGACCACGTCTCCATGGGAGGATGGGCAG...CTTGGCCATTGGCATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGCCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTA +
Preference number: 4 (lower is better)
Translates to: SGAMKRSFIQGLTTERTRPSPAE*LFSGDV
Trigger: TACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGG...CCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGGGGTTACTGGCTCAATaGCAGCCCACGGATGACAAT +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRGLLAQ*QPTDDN
Trigger: ATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCC...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGCAGCATTCCCCAAACTaGAGCGAAGAGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRQHSPN*SEEHHE
Trigger: CTCATGGTGCTCTTCGCTCCAGTTTGGGGAATGCTG...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCAGTGTCATTTTGACCTaGAGGGCTGCAGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSSVILT*RAAGAE
Trigger: TTCAGCCCCTGCAGCCCTCCAGGTCAAAATGACACT...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR CAA 72 bp AGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTaGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAPGHRPSPAEW*FSGDVETLCPG
Trigger: GCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGATGTCGGGCTTATTCTTaGTATAGCGCCTCACGGCCT +
Preference number: 4 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGCRAYS*YSASRP
Trigger: AGGCCGTGAGGCGCTATATCAAGAATAAGCCCGACA...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TCTAGGGCCATGGAAGTTTCCTCCAGAAACTGTCTCTCCCCTATTGGCAAAGACCGTCATCCACGGAGGTaGAGCCACCATTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SRAMEVSSRNCLSPIGKDRHPRR*SHHCRA
Trigger: AGCCCGACAATGGTGGCTTCACCTCCGTGGATGACG...GTCTTTGCCAATAGGGGAGAGACAGTTTCTGGAGGAAACTTCCATGGCCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546999.5
CDS-3UTR TCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCGTGAGCGTACTAAGTTaGCCTGAAGCTCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSVSVLS*PEAPVA
Trigger: AGCTACAGGAGCTTCAGGTCAACTTAGTACGCTCAC...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261208.8
CDS-3UTR GCA 90 bp TGGCCAAGTAGTCTAGGGCTTTGGCTGGGTATTCACCATGGAAGTTTCCTCCAGATGGCACCTACCTGCTaGTGGCCCCCTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WPSSLGLWLGIHHGSFLQMAPTC*WPPFFR
Trigger: CCTGAAGAAAGGGGGCCAGCAGCAGGTAGGTGCCAT...CTGGAGGAAACTTCCATGGTGAATACCCAGCCAAAGCCCTAGACTACTTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGGCAGGAGCAGGGGATaGAGACGGGTGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNGRSRG*RRVSLL
Trigger: CAGGAGGCTCACCCGTCTGCATCCCCTGCTCCTGCC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAGGCAGGAGCAGGGGATaGAGACGGGTGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAGRSRG*RRVSLL
Trigger: CAGGAGGCTCACCCGTCTGCATCCCCTGCTCCTGCC...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp CTCTCCCCTATTGGCAAAGACCATAGGATTATCTGTTGCGCTGTTCAGTTCTGTGGCAGGAGCAGGGGATaGAGACGGGTGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSPIGKDHRIICCAVQFCGRSRG*RRVSLL
Trigger: CAGGAGGCTCACCCGTCTGCATCCCCTGCTCCTGCC...ACAGAACTGAACAGCGCAACAGATAATCCTATGGTCTTTGCCAATAGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TCTACAGCTTCACAGCCCAGGGATGTGATCATCTGCGTCCCATTGATGAGTGCCCATTCCCCACGTACGTaGACCGTGTATCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: STASQPRDVIICVPLMSAHSPRT*TVYLGM
Trigger: CATGCCCAGATACACGGTGCACGTACGTGGGGAATG...GGCACTCATCAATGGGACGCAGATGATCACATCCCTGGGCTGTGAAGCTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCACCTCCCTGGATTTCTaGACCCTCTTCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSTSLDF*TLFSAV
Trigger: AACAGCTGAGAAGAGGGTGCAGAAATCCAGGGAGGT...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCCGTCCCATTGATGAGTaGCAGGCCCTCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSRPIDE*QALFWF
Trigger: AAACCAAAAGAGGGCCTGGCACTCATCAATGGGACG...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGCGTCCCATTGATGAGTaGCAGGCCCTCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RALQQSAPGHRPSPAEWLRPIDE*QALFWF
Trigger: AAACCAAAAGAGGGCCTGGCACTCATCAATGGGACG...CAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GGCTGCCTCGATGTCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACCGTCCCATTGATGAGTaGCAGGCCCTCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GCLDVRGHEAIFYPGPYNRPIDE*QALFWF
Trigger: AAACCAAAAGAGGGCCTGGCACTCATCAATGGGACG...GTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATCGAGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGGCCACAATGTCAGCCTaGCGTGCAATAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEATMSA*RAIALA
Trigger: AGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGC...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGTGGTCCTCCGTGGCTaGGCTGGTGGAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNVVLRG*AGGEGV
Trigger: GACTCCCTCTCCACCAGCGCAGCCACGGAGGACCAC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp TCTAGGGCCATGGAAGTTTCCTCCAGAAACTGTCTCTCCCCTATTGGCAAAGACTATGCCCTGGCAGGCTaGAAGGAGCTCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRAMEVSSRNCLSPIGKDYALAG*KELDGQ
Trigger: CTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATA...GTCTTTGCCAATAGGGGAGAGACAGTTTCTGGAGGAAACTTCCATGGCCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546999.5
CDS-3UTR GCA 90 bp GGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGGACGTAGAAACTCTATaGCCTGGCAGGCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GVVVFRGRRNSMPWQAARDVETL*PGRLQG
Trigger: TCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTC...CCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CCAGCGGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PAEWLFSGDVETLCPGRLDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...CAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGAGCTTTATGCAGGAGTaGCTACCGGGGTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLESFMQE*LPGCGQ
Trigger: CTGACCACACCCCGGTAGCCACTCCTGCATAAAGCT...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCTACAGCTTCACAGCCCAGGGATGTGATCATCTGCGTCCCATTGATGAGTGCCAGCTTTATGCAGGAGTaGCTACCGGGGTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: STASQPRDVIICVPLMSASFMQE*LPGCGQ
Trigger: CTGACCACACCCCGGTAGCCACTCCTGCATAAAGCT...GGCACTCATCAATGGGACGCAGATGATCACATCCCTGGGCTGTGAAGCTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATACCGTGTATCTGGGCATaGCTCCGCTGCAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIPCIWA*LRCSLR
Trigger: CCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGG...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGCGTGCACCGTGTATCTaGGCATGGCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKRAPCI*AWLRCS
Trigger: GCTGCAGCGGAGCCATGCCCAGATACACGGTGCACG...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCACAGTGTCAAAGGCTTTaGTGGTGCCCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSQCQRL*WCPSAP
Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTG...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATACCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACG +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIPWLRW*RGSQQT
Trigger: CGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGG...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGAGACGTGGTCCTCCGTaGCTGCGCTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQERRGPP*LRWWRG
Trigger: CCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCT...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATCCTCCCATGGAGACGTaGTCCTCCGTGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNPPMET*SSVAAL
Trigger: CAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGG...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGCCTCCCATGGAGACGTaGTCCTCCGTGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWPPMET*SSVAAL
Trigger: CAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGG...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTACTGCCCATCCTCCCATaGAGACGTGGTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLLPILP*RRGPPW
Trigger: CCACGGAGGACCACGTCTCCATGGGAGGATGGGCAG...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGGTTACTGGCTCAATaGCAGCCCACGGATGACAAT +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNGLLAQ*QPTDDN
Trigger: ATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCC...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAGGGGATGCAGACGGGTaGGCCTCCTGTCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAGDADG*ASCPLS
Trigger: GGAAAGTGGACAGGAGGCTCACCCGTCTGCATCCCC...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp ATGAGAGAGTGGGGCAAGGTCTCCACTGGCACCAACGGTTCCTTTCTCTGGGACTCTCAGCTGTTGGGGTaGGCTTTATTTTGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: MREWGKVSTGTNGSFLWDSQLLG*ALFCSV
Trigger: GACGCTACAAAATAAAGCTCACCCCAACAGCTGAGA...GTCCCAGAGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCCCACTCTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GCTTCTAGCACGTATTTAGCATCAGCCCAGCCACTCTTCGGAGACCACATCTTCAGCCCAAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: ASSTYLASAQPLFGDHIFSPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCT...GAAGATGTGGTCTCCGAAGAGTGGCTGGGCTGATGCTAAATACGTGCTAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGAGCTGCTGCCGTGCAGTaGGCTATCATGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGAAAVQ*AIMNPE
Trigger: CTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGC...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGTGCTTTGTGCTAAACTaGCTGCCCTCTCATCTGCTA +
Preference number: 4 (lower is better)
Translates to: SGAMKRSFIQGLTTERTRCFVLN*LPSHLL
Trigger: TAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCA...CCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGCACTTAAGCCATCCCTaGAGGTCCTTTATCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRHLSHP*RSFIFS
Trigger: CGAGAAGATAAAGGACCTTCAGGGATGGCTTAAGTG...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGGTGAGCGTACTAAGTTaGCCTGAAGCTCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SGAMKRSFIQGLTTERTRVSVLS*PEAPCF
Trigger: AAAACAGGGAGCTTCAGGTCAACTTAGTACGCTCAC...CCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCGGGGTGTGGTCAGCTaGTGTCCCTTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLERGVVS*CPFGFC
Trigger: ACAAAAACCAAAGGGACAGCAGCTGACCACACCCCG...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCAGCCCACAGTGAGCTaGGCGTCCTGGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISQPTVS*ASWQGT
Trigger: AGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTG...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTCAGCCCACAGTGAGCTaGGCGTCCTGGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCQPTVS*ASWQGT
Trigger: AGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTG...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATCGGCGCACAAGGAAGTaGGCGTCATCCACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNRRTRK*ASSTEV
Trigger: CACCTCCGTGGATGACGCGCACTTCCTTGTGCGCCG...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTCGGCGCACAAGGAAGTaGGCGTCATCCACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFRRTRK*ASSTEV
Trigger: CACCTCCGTGGATGACGCGCACTTCCTTGTGCGCCG...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAACGGCGCACAAGGAAGTaGGCGTCATCCACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKRRTRK*ASSTEV
Trigger: CACCTCCGTGGATGACGCGCACTTCCTTGTGCGCCG...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGACCTCCCTGGATTTCTaGACCCTCTTCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSTSLDF*TLFSAV
Trigger: AACAGCTGAGAAGAGGGTGCAGAAATCCAGGGAGGT...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCCATAGGATTATCTGTTaGGCTGTTCAGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: AALVERESTDEGWHRALFHRIIC*AVQFCG
Trigger: ACCACAGAACTGAACAGCGCAACAGATAATCCTATG...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGAGAAACAAGGGCTGCTaGCGTGCAGTGAGCTATCAT +
Preference number: 4 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSRNKGC*RAVSYH
Trigger: ATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCT...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGTGGTCCTCCGTGGCTaGGCTGGTGGAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCVVLRG*AGGEGV
Trigger: GACTCCCTCTCCACCAGCGCAGCCACGGAGGACCAC...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGACCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGPEGFP*CPSSHG
Trigger: TCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGG...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATGGGTGGTGATCTGAGTCCAAGAGTGACCGAAACCGAAAAGCAACTTCAATTTGAGCAGCCTGTGGGCTaGCTCGATGTCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: MGGDLSPRVTETEKQLQFEQPVG*LDVRGH
Trigger: ATGGCCCCGGACATCGAGGCAGCCCACAGGCTGCTC...AAATTGAAGTTGCTTTTCGGTTTCGGTCACTCTTGGACTCAGATCACCACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCAGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGCCGTGTATCTGGGCATaGCTCCGCTGCAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQEPCIWA*LRCSLR
Trigger: CCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGG...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCGTGAGCTGCGCGTCCTaGCAGGGCACTGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISVSCAS*QGTASH
Trigger: ATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCAC...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp ATGGGTGGTGATCTGAGTCCAAGAGTGACCGAAACCGAAAAGCAACTTCAATTTGTGAGCTGCGCGTCCTaGCAGGGCACTGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: MGGDLSPRVTETEKQLQFVSCAS*QGTASH
Trigger: ATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCAC...AAATTGAAGTTGCTTTTCGGTTTCGGTCACTCTTGGACTCAGATCACCACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCAGTAGTCTAGGGCTTTaGCTGGGTATTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSSSLGL*LGIHHG
Trigger: TCCATGGTGAATACCCAGCCAAAGCCCTAGACTACT...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CCAGCGGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGGTTCATGGATGCCAATaGCCAAGTAGTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PAEWLFSGDVETLCPGRLVHGCQ*PSSLGL
Trigger: AAGCCCTAGACTACTTGGCCATTGGCATCCATGAAC...CAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCATCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSSTDEG*HRALFS
Trigger: TGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGA...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATCCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNPWLRW*RGSQQT
Trigger: CGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGG...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGCTGCCCATCCTCCCATaGAGACGTGGTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQELPILP*RRGPPW
Trigger: CCACGGAGGACCACGTCTCCATGGGAGGATGGGCAG...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTA +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEPSPAE*LFSGDV
Trigger: TACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGG...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp GCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCACCAGCCAGCCCACAGTaGGCTGCGCGTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVGERGLDSGICSILYFSPASPQ*AARPGR
Trigger: CCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGG...TGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGATTTCTGATGGGTGGTaGTCTGAGTCCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: GVVVFRGRRNSMPWQAARISDGW*SESKSD
Trigger: GTCACTCTTGGACTCAGATCACCACCCATCAGAAAT...CCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGCGATCACAGAACCTGTaGCTCTCTGCTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SGAMKRSFIQGLTTERTRRSQNL*LSAISD
Trigger: ATCAGAAATAGCAGAGAGTCACAGGTTCTGTGATCG...CCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GGCTGCCTCGATGTCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACCGATCACAGAACCTGTaGCTCTCTGCTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: GCLDVRGHEAIFYPGPYNRSQNL*LSAISD
Trigger: ATCAGAAATAGCAGAGAGTCACAGGTTCTGTGATCG...GTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATCGAGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCCGATTCTTCTCTCACTaGTTGCAGCAAGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSRFFSH*LQQVHG
Trigger: TCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCG...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTAGGCAGGCAGCTCACTaGGGGAGGGATTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SDSGILVDFLCRNCSEKARQAAH*GRDCRA
Trigger: GGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCT...AGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGATGGCAGCCCACGGATaGCAATGCACAAACCTCATT +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEMAAHG*QCTNLI
Trigger: AATGAGGTTTGTGCATTGTCATCCGTGGGCTGCCAT...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCAGTGAGCGTACTAAGTTaGCCTGAAGCTCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSVSVLS*PEAPCF
Trigger: AAAACAGGGAGCTTCAGGTCAACTTAGTACGCTCAC...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541929.5
CDS-3UTR TCA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGGTGAGCGTACTAAGTTaGCCTGAAGCTCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSVSVLS*PEAPCF
Trigger: AAAACAGGGAGCTTCAGGTCAACTTAGTACGCTCAC...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATAATGGCACCTACCTGCTaGTGGCCCCCTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIMAPTC*WPPFFR
Trigger: CCTGAAGAAAGGGGGCCAGCAGCAGGTAGGTGCCAT...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGGGCAGGAGCAGGGGATaGAGACGGGTGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SEKAVGERGLDSGICSILGRSRG*RRVSLL
Trigger: CAGGAGGCTCACCCGTCTGCATCCCCTGCTCCTGCC...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GCTTCTAGCACGTATTTAGCATCAGCCCAGCCACTCTTCGGAGACCACATCTTCCGGGGTGTGGTCAGCTaGTGTCCCTTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: ASSTYLASAQPLFGDHIFRGVVS*CPFGFC
Trigger: ACAAAAACCAAAGGGACAGCAGCTGACCACACCCCG...GAAGATGTGGTCTCCGAAGAGTGGCTGGGCTGATGCTAAATACGTGCTAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGACATTCCCCACGTACGTaGACCGTGTATCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGHSPRT*TVYLGM
Trigger: CATGCCCAGATACACGGTGCACGTACGTGGGGAATG...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGCAGCCCACAGTGAGCTaGGCGTCCTGGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVQPTVS*ASWQGT
Trigger: AGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTG...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAGCAGGCCCAGGCCCTTaGACCGGCGCACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQAGPGP*TGAQGS
Trigger: ACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGC...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGAGGGATGTGATCATCTaGGTCCCATTGATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLERDVII*VPLMSA
Trigger: GGCACTCATCAATGGGACGCAGATGATCACATCCCT...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATAGAGGGCTTTCCTTGCTaGCCATCCTCCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIEGFPC*PSSHGD
Trigger: GTCTCCATGGGAGGATGGGCAGCAAGGAAAGCCCTC...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTATGCCCTGGCAGGCTaGAAGGAGCTCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWYALAG*KELDGQ
Trigger: CTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATA...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAGAGCAGCCTGTGGGCTaGCTCGATGTCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQEQPVG*LDVRGH
Trigger: ATGGCCCCGGACATCGAGGCAGCCCACAGGCTGCTC...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGTCCCTTGAAGGCGTGTaGTGTCAGTTACTAATAGAG +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRSLEGV*CQLLIE
Trigger: CTCTATTAGTAACTGACAGCACACGCCTTCAAGGGA...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGCACCTACCTGCTGCTaGCCCCCTTTCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNAPTCC*PPFFRV
Trigger: GACCCTGAAGAAAGGGGGCCAGCAGCAGGTAGGTGC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTGCTGCCAGAAAGGCCTaGGGTCTCCCACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCAARKA*GLPPWE
Trigger: CTCCCAGGGTGGGAGACCCCAGGCCTTTCTGGCAGC...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGGTGGCTACCGGGGTGTaGTCAGCTGCTGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PGFWWISCAEIAVKRLLEVATGV*SAAVPL
Trigger: CAAAGGGACAGCAGCTGACCACACCCCGGTAGCCAC...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGTGGCTACCGGGGTGTaGTCAGCTGCTGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNVATGV*SAAVPL
Trigger: CAAAGGGACAGCAGCTGACCACACCCCGGTAGCCAC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCGTGCACCGTGTATCTaGGCATGGCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISRAPCI*AWLRCS
Trigger: GCTGCAGCGGAGCCATGCCCAGATACACGGTGCACG...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAGTGAGCTGCGCGTCCTaGCAGGGCACTGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQVSCAS*QGTASH
Trigger: ATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCAC...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AAAGCCAAGAGCATCCGACACCTCTCAGGACTTAGTGGTTTCCCAACACCTGAAGGGCAAGGTCTCCACTaGCACCAACGGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KAKSIRHLSGLSGFPTPEGQGLH*HQRFLS
Trigger: AGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCC...TTCAGGTGTTGGGAAACCACTAAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTGTCAAAGGCTTTGGTaGTGCCCTTCAGCACCTCAA +
Preference number: 4 (lower is better)
Translates to: ALQQSAPGHRPSPAEWLFCQRLW*CPSAPQ
Trigger: TTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACA...AAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp ATGAGAGAGTGGGGCAAGGTCTCCACTGGCACCAACGGTTCCTTTCTCTGGGACGCTGGGTATTCACCATaGAAGTTTCCTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: MREWGKVSTGTNGSFLWDAGYSP*KFPPET
Trigger: AGTTTCTGGAGGAAACTTCCATGGTGAATACCCAGC...GTCCCAGAGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCCCACTCTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCAAGTAGTCTAGGGCTTTaGCTGGGTATTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSSSLGL*LGIHHG
Trigger: TCCATGGTGAATACCCAGCCAAAGCCCTAGACTACT...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGAGTAGTCTAGGGCTTTaGCTGGGTATTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSSSLGL*LGIHHG
Trigger: TCCATGGTGAATACCCAGCCAAAGCCCTAGACTACT...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CCA 90 bp TTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGCCTCCGTGGCTGCGCTaGTGGAGAGGGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LKVLRLRDFGGFLVQKLQPPWLR*WRGSQQ
Trigger: CTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGG...CTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGCCTCCCATGGAGACGTaGTCCTCCGTGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SEKAVGERGLDSGICSILPPMET*SSVAAL
Trigger: CAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGG...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTACCTCCCATGGAGACGTaGTCCTCCGTGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLPPMET*SSVAAL
Trigger: CAGCGCAGCCACGGAGGACCACGTCTCCATGGGAGG...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR TCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCTGGTTGAGATGGAATaGAGTCAGGAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLELVEME*SQETWH
Trigger: ATGCCATGTCTCCTGACTTCATTCCATCTCAACCAG...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGGTCCCTTTCCCAAGTTaGCCAGATCCTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKVPFPS*PDPPWS
Trigger: TGACCACGGAGGATCTGGTCAACTTGGGAAAGGGAC...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTTCTCAGCTGTTGGGGTaGGCTTTATTTTGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: ALQQSAPGHRPSPAEWLFSQLLG*ALFCSV
Trigger: GACGCTACAAAATAAAGCTCACCCCAACAGCTGAGA...AAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATAAGCCCAAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHISPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCT...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAGCTGCTGCCGTGCAGTaGGCTATCATGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAAAAVQ*AIMNPE
Trigger: CTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGC...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGAGCGAAGAGCACCATaGGACCACTGGGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNERRAP*DHWGLL
Trigger: CAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGACGTACTAAGTTGACCTaGAGCTCCCTGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGRTKLT*SSLFSL
Trigger: AAGAGAAAACAGGGAGCTTCAGGTCAACTTAGTACG...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAATGGCACCTACCTGCTaGTGGCCCCCTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAMAPTC*WPPFFR
Trigger: CCTGAAGAAAGGGGGCCAGCAGCAGGTAGGTGCCAT...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTATGGCACCTACCTGCTaGTGGCCCCCTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFMAPTC*WPPFFR
Trigger: CCTGAAGAAAGGGGGCCAGCAGCAGGTAGGTGCCAT...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATCTTTCCATCCAGACCTaGTGCCAGAAAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNLSIQT*CQKGLG
Trigger: CCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGAAAG...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTGGCAGGAGCAGGGGATaGAGACGGGTGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFGRSRG*RRVSLL
Trigger: CAGGAGGCTCACCCGTCTGCATCCCCTGCTCCTGCC...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGGAGGGGAGAGCTTTATaGAGGAGTGGCTACCGGGGT +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQEEGRAL*RSGYRG
Trigger: ACCCCGGTAGCCACTCCTGCATAAAGCTCTCCCCTC...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGAGGGGAGAGCTTTATaGAGGAGTGGCTACCGGGGT +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNEGRAL*RSGYRG
Trigger: ACCCCGGTAGCCACTCCTGCATAAAGCTCTCCCCTC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAAGAGGGGAGAGCTTTATaGAGGAGTGGCTACCGGGGT +
Preference number: 4 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKEGRAL*RSGYRG
Trigger: ACCCCGGTAGCCACTCCTGCATAAAGCTCTCCCCTC...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAGCCACAATGTCAGCCTaGCGTGCAATAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLATMSA*RAIALA
Trigger: AGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGC...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGCAAAGGCTTTGGTGGTaGCCTTCAGCACCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKQRLWW*PSAPQG
Trigger: CCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTG...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATCAGCAAGTTCATGGATaGCAATGGCCAAGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNQQVHG*QWPSSL
Trigger: TAGACTACTTGGCCATTGGCATCCATGAACTTGCTG...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCGTGGTCCTCCGTGGCTaGGCTGGTGGAGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSVVLRG*AGGEGV
Trigger: GACTCCCTCTCCACCAGCGCAGCCACGGAGGACCAC...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGAGGGCTTTCCTTGCTaGCCATCCTCCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNEGFPC*PSSHGD
Trigger: GTCTCCATGGGAGGATGGGCAGCAAGGAAAGCCCTC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGGAGGGCTTTCCTTGCTaGCCATCCTCCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: PGFWWISCAEIAVKRLLEEGFPC*PSSHGD
Trigger: GTCTCCATGGGAGGATGGGCAGCAAGGAAAGCCCTC...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCACCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAPEGFP*CPSSHG
Trigger: TCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGG...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp CTCTCCCCTATTGGCAAAGACCATAGGATTATCTGTTGCGCTGTTCAGTTCTGTCCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LSPIGKDHRIICCAVQFCPEGFP*CPSSHG
Trigger: TCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGG...ACAGAACTGAACAGCGCAACAGATAATCCTATGGTCTTTGCCAATAGGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGGACGTAGAAACTCTATaGCCTGGCAGGCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: IFYPGPYNRAHQVIDLLQDVETL*PGRLQG
Trigger: TCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTC...CTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCGAGCAGCCTGTGGGCTaGCTCGATGTCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSEQPVG*LDVRGH
Trigger: ATGGCCCCGGACATCGAGGCAGCCCACAGGCTGCTC...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp GCTTCTAGCACGTATTTAGCATCAGCCCAGCCACTCTTCGGAGACCACATCTTCGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ASSTYLASAQPLFGDHIFDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...GAAGATGTGGTCTCCGAAGAGTGGCTGGGCTGATGCTAAATACGTGCTAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCGCACCTACCTGCTGCTaGCCCCCTTTCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISAPTCC*PPFFRV
Trigger: GACCCTGAAGAAAGGGGGCCAGCAGCAGGTAGGTGC...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCGCACCTACCTGCTGCTaGCCCCCTTTCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVAPTCC*PPFFRV
Trigger: GACCCTGAAGAAAGGGGGCCAGCAGCAGGTAGGTGC...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCGATGGCCAGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTTCCTTCTGGTTGAGATaGAATGAAGTCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: SMASTCSTCSMTLRAFLASFWLR*NEVRRH
Trigger: ATGTCTCCTGACTTCATTCCATCTCAACCAGAAGGA...AGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCCCTCTTCTCAGCTGTTaGGGTGAGCTTTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSPLLSC*GELYFV
Trigger: TACAAAATAAAGCTCACCCCAACAGCTGAGAAGAGG...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GCTATCATGAACCCAGAGTTCAGACCACCTTCAGCCACCAGGAAGGCAGGCAGCCCTCTTCTCAGCTGTTaGGGTGAGCTTTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: AIMNPEFRPPSATRKAGSPLLSC*GELYFV
Trigger: TACAAAATAAAGCTCACCCCAACAGCTGAGAAGAGG...GCTGCCTGCCTTCCTGGTGGCTGAAGGTGGTCTGAACTCTGGGTTCATGATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATATCATTCACCACACCATaGACCTGTGGACAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHISFTTP*TCGQQR
Trigger: GCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATGA...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTACCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACG +
Preference number: 4 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLPWLRW*RGSQQT
Trigger: CGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGG...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAACCTCCGTGGCTGCGCTaGTGGAGAGGGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQPPWLR*WRGSQQ
Trigger: CTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGG...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGCCTCCGTGGCTGCGCTaGTGGAGAGGGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVPPWLR*WRGSQQ
Trigger: CTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGG...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTCCTCCGTGGCTGCGCTaGTGGAGAGGGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCPPWLR*WRGSQQ
Trigger: CTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGG...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTAGACGTGGTCCTCCGTaGCTGCGCTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFRRGPP*LRWWRG
Trigger: CCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCT...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp TATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTTGCTCATTCAGACGTGGTCCTCCGTaGCTGCGCTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: YGFLVVLQVVAQIPFCSFRRGPP*LRWWRG
Trigger: CCCTCTCCACCAGCGCAGCCACGGAGGACCACGTCT...GAATGAGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGCTGCCCATCCTCCCATaGAGACGTGGTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SEKAVGERGLDSGICSILLPILP*RRGPPW
Trigger: CCACGGAGGACCACGTCTCCATGGGAGGATGGGCAG...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCACAGACTCCGGGATTTTaGTGGATTTCTTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSQTPGF*WISCAE
Trigger: TTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTG...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGTCCCATGTAAGCATTTaGGGGATACGTGTAGTGATA +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRSHVSI*GIRVVI
Trigger: TATCACTACACGTATCCCCCAAATGCTTACATGGGA...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGACCCATCCTTCATCTaGACAGATACACTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNDPSFI*TDTLKP
Trigger: TGGCTTAAGTGTATCTGTCCAGATGAAGGATGGGTC...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCCATATATGCACACACTaGTGCAAAGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSHICTH*CKVTEL
Trigger: AAGCTCTGTGACTTTGCACCAGTGTGTGCATATATG...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGAGCTCGAGTAGTCTAGGGCCATaGAAGTTTCCTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: VVFRGRRNSMPWQAARSSSSLGP*KFPPET
Trigger: AGTTTCTGGAGGAAACTTCCATGGCCCTAGACTACT...CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546999.5
CDS-3UTR TCA 90 bp CTCTCCCCTATTGGCAAAGACCATAGGATTATCTGTTGCGCTGTTCAGTTCTGTTGCTGTTCTTGTCCCTaGTGGCACCTACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSPIGKDHRIICCAVQFCCCSCP*WHLPAA
Trigger: AGCAGCAGGTAGGTGCCATCAGGGACAAGAACAGCA...ACAGAACTGAACAGCGCAACAGATAATCCTATGGTCTTTGCCAATAGGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR TCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGCGTCATCCACGGAGGTaGAGCCACCATTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SEKAVGERGLDSGICSILRHPRR*SHHCRA
Trigger: AGCCCGACAATGGTGGCTTCACCTCCGTGGATGACG...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAAGTCCCTTTCCCAAGTTaGCCAGATCCTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKVPFPS*PDPPWS
Trigger: TGACCACGGAGGATCTGGTCAACTTGGGAAAGGGAC...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTTGCTCATTCAGGCAGGCAGCTCACTaGGGGAGGGATTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: YGFLVVLQVVAQIPFCSFRQAAH*GRDCRA
Trigger: GGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCT...GAATGAGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR TCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATGCAGTGAGCTATCATaGACCCAGAGTTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGCSELS*TQSSDH
Trigger: GTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCA...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCACGATGTCCGGGGCCATaGAGCGATCTTTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLARCPGP*SDLLSR
Trigger: CCTGGATAAAAGATCGCTTCATGGCCCCGGACATCG...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261208.8
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTCGATGTCCGGGGCCATaGAGCGATCTTTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFRCPGP*SDLLSR
Trigger: CCTGGATAAAAGATCGCTTCATGGCCCCGGACATCG...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCATGGAGAAAGAGGTCTTaGTTCTGGAATATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSWRKRS*FWNMLH
Trigger: ATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCA...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp GGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGTGGAGAAAGAGGTCTTaGTTCTGGAATATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GVVVFRGRRNSMPWQAARWRKRS*FWNMLH
Trigger: ATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCA...CCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATTCATCTGCTACTTCATaGCAAAGCCCATTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNSSATS*QSPLKV
Trigger: GACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGA...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGCCCTTGAAGTTCCCTTaGAGGCGTGTGCTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKPLKFP*RRVLSV
Trigger: AACTGACAGCACACGCCTTCAAGGGAACTTCAAGGG...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTTCCATCCAGACCTGCTaGCAGAAAGGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCSIQTC*QKGLGS
Trigger: AGACCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGA...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTCTTTCCATCCAGACCTaGTGCCAGAAAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCLSIQT*CQKGLG
Trigger: CCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGAAAG...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTACGGGGTGTGGTCAGCTaGTGTCCCTTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLRGVVS*CPFGFC
Trigger: ACAAAAACCAAAGGGACAGCAGCTGACCACACCCCG...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATCATTCCCCACGTACGTaGACCGTGTATCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNHSPRT*TVYLGM
Trigger: CATGCCCAGATACACGGTGCACGTACGTGGGGAATG...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCACAGCCCACAGTGAGCTaGGCGTCCTGGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: AVGERGLDSGICSILYFSQPTVS*ASWQGT
Trigger: AGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTG...TGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GCATTAAACATTTCTATGACTTGTTTGAGGGTCTCCAGGGAAATGCCACTGTATCGGCGCACAAGGAAGTaGGCGTCATCCACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ALNISMTCLRVSREMPLYRRTRK*ASSTEV
Trigger: CACCTCCGTGGATGACGCGCACTTCCTTGTGCGCCG...ATACAGTGGCATTTCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTTAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGAGGGTCTCCAGGGAAATaGCACTGTATCCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGGSPGK*HCILWL
Trigger: TAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCC...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATAATGTCAGCCTGCCGTaGAATAGCACTGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNNVSLP*NSTGSL
Trigger: GAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTGCCACAATGTCAGCCTaGCGTGCAATAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFATMSA*RAIALA
Trigger: AGCCAGTGCTATTGCACGGCAGGCTGACATTGTGGC...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGCAAAGGCTTTGGTGGTaGCCTTCAGCACCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQEQRLWW*PSAPQG
Trigger: CCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTG...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGCAGCGCAAGGTGTATaGATCCTGGACGCGATCACA +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNAAQGV*ILDAIT
Trigger: TGTGATCGCGTCCAGGATGCATACACCTTGCGCTGC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATACTCAGAAACAAGGGCTaGTGCCGTGCAGTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHILRNKG*CRAVSY
Trigger: ATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAG...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGAGGGCTTTCCTTGCTaGCCATCCTCCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCEGFPC*PSSHGD
Trigger: GTCTCCATGGGAGGATGGGCAGCAAGGAAAGCCCTC...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGAGCACTTGCTCCACATaGTCGATGACCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQESTCST*SMTLRA
Trigger: AGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAATATGCCCTGGCAGGCTaGAAGGAGCTCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQYALAG*KELDGQ
Trigger: CTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATA...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GGCTGCCTCGATGTCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACTTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GCLDVRGHEAIFYPGPYNFLCRN*SEKAVG
Trigger: TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAA...GTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATCGAGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGTGGGGTCTCCCACCCTaGGAGGTGCTGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVWGLPP*EVLFLS
Trigger: GGACAAGAACAGCACCTCCCAGGGTGGGAGACCCCA...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAAGCTTTATGCAGGAGTaGCTACCGGGGTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLASFMQE*LPGCGQ
Trigger: CTGACCACACCCCGGTAGCCACTCCTGCATAAAGCT...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGAGCTTTATGCAGGAGTaGCTACCGGGGTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGFWWISCAEIAVKRLLESFMQE*LPGCGQ
Trigger: CTGACCACACCCCGGTAGCCACTCCTGCATAAAGCT...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATCGTGCACCGTGTATCTaGGCATGGCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYRAPCI*AWLRCS
Trigger: GCTGCAGCGGAGCCATGCCCAGATACACGGTGCACG...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATTCCTTCTGGTTGAGATaGAATGAAGTCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNSFWLR*NEVRRH
Trigger: ATGTCTCCTGACTTCATTCCATCTCAACCAGAAGGA...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGACCTCTTCTCAGCTGTTaGGGTGAGCTTTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGPLLSC*GELYFV
Trigger: TACAAAATAAAGCTCACCCCAACAGCTGAGAAGAGG...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGAACGGTTCCTTTCTCTaGGACATAGGGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKNGSFL*DIGQAG
Trigger: TCCTGCCTGCCCTATGTCCCAGAGAAAGGAACCGTT...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGGGCAAGGTCTCCACTaGCACCAACGGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNGQGLH*HQRFLS
Trigger: AGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATACAGTGTCAAAGGCTTTaGTGGTGCCCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIQCQRL*WCPSAP
Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTG...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCCCTCCGTGGCTGCGCTaGTGGAGAGGGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSPPWLR*WRGSQQ
Trigger: CTGTTGACTCCCTCTCCACCAGCGCAGCCACGGAGG...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCCTGCCCATCCTCCCATaGAGACGTGGTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSLPILP*RRGPPW
Trigger: CCACGGAGGACCACGTCTCCATGGGAGGATGGGCAG...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAAGAAACTCTATGCCCTaGCAGGCTGCAAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLARNSMP*QAARSS
Trigger: CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCT...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATAGAAACTCTATGCCCTaGCAGGCTGCAAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNRNSMP*QAARSS
Trigger: CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp CCATTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACAGAAACTCTATGCCCTaGCAGGCTGCAAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PFLFLILRYSTVGCTLVHRNSMP*QAARSS
Trigger: CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCT...GTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp TCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGAGGCACATACAATTGTaGTTATTCTTCTCACCCTTA +
Preference number: 4 (lower is better)
Translates to: SRALQQSAPGHRPSPAEWRHIQL*LFFSPL
Trigger: TAAGGGTGAGAAGAATAACCACAATTGTATGTGCCT...CCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAACCACTGGGGGTTACTaGCTCAATGGCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQTTGGY*LNGSPR
Trigger: CCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTGGT...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGACCACTGGGGGTTACTaGCTCAATGGCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVTTGGY*LNGSPR
Trigger: CCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTGGT...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTCGTCATCCACGGAGGTaGAGCCACCATTGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFRHPRR*SHHCRA
Trigger: AGCCCGACAATGGTGGCTTCACCTCCGTGGATGACG...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp CGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGCCAATGGCCAAGCTGGTTGAGATGGAATaGAGTCAGGAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: RSILLSLIAASSWMPMAKLVEME*SQETWH
Trigger: ATGCCATGTCTCCTGACTTCATTCCATCTCAACCAG...CTTGGCCATTGGCATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGAATTTCTGATGGGTGGTaGTCTGAGTCCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGISDGW*SESKSD
Trigger: GTCACTCTTGGACTCAGATCACCACCCATCAGAAAT...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGTGCAGTGAGCTATCATaGACCCAGAGTTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKCSELS*TQSSDH
Trigger: GTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCA...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCCGATGTCCGGGGCCATaGAGCGATCTTTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVRCPGP*SDLLSR
Trigger: CCTGGATAAAAGATCGCTTCATGGCCCCGGACATCG...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAATACCTGGTGGGTCTTaGACCACGACAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLIPGGS*TTTTGT
Trigger: TGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTAT...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCACCCTTGAAGTTCCCTTaGAGGCGTGTGCTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAPLKFP*RRVLSV
Trigger: AACTGACAGCACACGCCTTCAAGGGAACTTCAAGGG...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAACTGATGGCACCTACCTaGTGCTGGCCCCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQLMAPT*CWPPFF
Trigger: GAAGAAAGGGGGCCAGCAGCAGGTAGGTGCCATCAG...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCATTCCCCACGTACGTaGACCGTGTATCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISHSPRT*TVYLGM
Trigger: CATGCCCAGATACACGGTGCACGTACGTGGGGAATG...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATAACCTCCCTGGATTTCTaGACCCTCTTCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHITSLDF*TLFSAV
Trigger: AACAGCTGAGAAGAGGGTGCAGAAATCCAGGGAGGT...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAGGGTCTCCAGGGAAATaGCACTGTATCCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLGSPGK*HCILWL
Trigger: TAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCC...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAAATGTCAGCCTGCCGTaGAATAGCACTGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGNVSLP*NSTGSL
Trigger: GAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATT...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGACAAAGGCTTTGGTGGTaGCCTTCAGCACCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGQRLWW*PSAPQG
Trigger: CCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTG...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGGCAGCGCAAGGTGTATaGATCCTGGACGCGATCACA +
Preference number: 4 (lower is better)
Translates to: LKVLRLRDFGGFLVQKLQAAQGV*ILDAIT
Trigger: TGTGATCGCGTCCAGGATGCATACACCTTGCGCTGC...CTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGCTCAGAAACAAGGGCTaGTGCCGTGCAGTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PGFWWISCAEIAVKRLLELRNKG*CRAVSY
Trigger: ATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAG...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CCATTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACCTCAGAAACAAGGGCTaGTGCCGTGCAGTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PFLFLILRYSTVGCTLVHLRNKG*CRAVSY
Trigger: ATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAG...GTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGCCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVPEGFP*CPSSHG
Trigger: TCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGG...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCTATGCCCTGGCAGGCTaGAAGGAGCTCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSYALAG*KELDGQ
Trigger: CTGGCCATCGAGCTCCTTGCAGCCTGCCAGGGCATA...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATAGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CCATTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTCAAAGAGGACATCTTaGAGGGGTGGGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: PFLFLILRYSTVGCTLVHSKRTS*RGGEAS
Trigger: TGATGCCTCCCCACCCCTGCAAGATGTCCTCTTTGA...GTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGTCCTTCTGGTTGAGATaGAATGAAGTCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLESFWLR*NEVRRH
Trigger: ATGTCTCCTGACTTCATTCCATCTCAACCAGAAGGA...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGAACGGTTCCTTTCTCTaGGACATAGGGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGFWWISCAEIAVKRLLENGSFL*DIGQAG
Trigger: TCCTGCCTGCCCTATGTCCCAGAGAAAGGAACCGTT...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGAACGGTTCCTTTCTCTaGGACATAGGGCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWNGSFL*DIGQAG
Trigger: TCCTGCCTGCCCTATGTCCCAGAGAAAGGAACCGTT...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGTGTCAAAGGCTTTGGTaGTGCCCTTCAGCACCTCAA +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKCQRLW*CPSAPQ
Trigger: TTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACA...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TTGGCTAAGACATTGATCCTTAAAGCCAAGAGCATCCGACACCTCTCAGGACTTCAGTGTCAAAGGCTTTaGTGGTGCCCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LAKTLILKAKSIRHLSGLQCQRL*WCPSAP
Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTG...AAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCAGAAACTCTATGCCCTaGCAGGCTGCAAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVRNSMP*QAARSS
Trigger: CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCT...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGTCGGGCTTATTCTTaGTATAGCGCCTCACGGCCT +
Preference number: 4 (lower is better)
Translates to: LKVLRLRDFGGFLVQKLQCRAYS*YSASRP
Trigger: AGGCCGTGAGGCGCTATATCAAGAATAAGCCCGACA...CTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATATCTCAGCTGTTGGGGTaGGCTTTATTTTGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHISQLLG*ALFCSV
Trigger: GACGCTACAAAATAAAGCTCACCCCAACAGCTGAGA...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCAAGCCCAAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPSPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCT...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAATTTCTGATGGGTGGTaGTCTGAGTCCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLISDGW*SESKSD
Trigger: GTCACTCTTGGACTCAGATCACCACCCATCAGAAAT...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGTGCAGTGAGCTATCATaGACCCAGAGTTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: PGFWWISCAEIAVKRLLECSELS*TQSSDH
Trigger: GTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCA...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTGCTGCTGCCGTGCAGTaGGCTATCATGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFAAAVQ*AIMNPE
Trigger: CTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGC...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTACGATGTCCGGGGCCATaGAGCGATCTTTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLRCPGP*SDLLSR
Trigger: CCTGGATAAAAGATCGCTTCATGGCCCCGGACATCG...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR TCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGCGGTTTCAGACCACTTaGAGGGCCTTGCACATATAT +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKRFQTT*RALHIY
Trigger: ATATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCG...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTCCATCCAGACCTGCTaGCAGAAAGGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYSIQTC*QKGLGS
Trigger: AGACCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGA...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTTCCATCCAGACCTGCTaGCAGAAAGGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFSIQTC*QKGLGS
Trigger: AGACCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGA...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATCTTTCCATCCAGACCTaGTGCCAGAAAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYLSIQT*CQKGLG
Trigger: CCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGAAAG...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTGAGGGGAGAGCTTTATaGAGGAGTGGCTACCGGGGT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFEGRAL*RSGYRG
Trigger: ACCCCGGTAGCCACTCCTGCATAAAGCTCTCCCCTC...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGGCCCAGGCCCTTaGACCGGCGCACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ERGLDSGICSILYFSMYGAGPGP*TGAQGS
Trigger: ACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGC...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTACCTCCCTGGATTTCTaGACCCTCTTCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFTSLDF*TLFSAV
Trigger: AACAGCTGAGAAGAGGGTGCAGAAATCCAGGGAGGT...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCACGTCCCATTGATGAGTaGCAGGCCCTCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLARPIDE*QALFWF
Trigger: AAACCAAAAGAGGGCCTGGCACTCATCAATGGGACG...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAAGGGATGTGATCATCTaGGTCCCATTGATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLARDVII*VPLMSA
Trigger: GGCACTCATCAATGGGACGCAGATGATCACATCCCT...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp CTCTCCCCTATTGGCAAAGACCATAGGATTATCTGTTGCGCTGTTCAGTTCTGTAGGGATGTGATCATCTaGGTCCCATTGATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LSPIGKDHRIICCAVQFCRDVII*VPLMSA
Trigger: GGCACTCATCAATGGGACGCAGATGATCACATCCCT...ACAGAACTGAACAGCGCAACAGATAATCCTATGGTCTTTGCCAATAGGGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGAATGTCAGCCTGCCGTaGAATAGCACTGGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVNVSLP*NSTGSL
Trigger: GAGCGAGCCAGTGCTATTGCACGGCAGGCTGACATT...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGGATGTTCTTCACAAATaGTATTGTATCATTCACCAC +
Preference number: 4 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRDVLHK*YCIIHH
Trigger: GTGGTGAATGATACAATAGCATTTGTGAAGAACATC...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GGATTGCAGAGCCGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGCAGCAAGTTCATGGATaGCAATGGCCAAGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: GLQSRSILLSLIAASSWMQQVHG*QWPSSL
Trigger: TAGACTACTTGGCCATTGGCATCCATGAACTTGCTG...CATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCGGCTCTGCAATCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAAGAAACAAGGGCTGCTaGCGTGCAGTGAGCTATCAT +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLARNKGC*RAVSYH
Trigger: ATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCT...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCGAGGGCTTTCCTTGCTaGCCATCCTCCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSEGFPC*PSSHGD
Trigger: GTCTCCATGGGAGGATGGGCAGCAAGGAAAGCCCTC...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTAGCACTTGCTCCACATaGTCGATGACCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCSTCST*SMTLRA
Trigger: AGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCAAGCACTTGCTCCACATaGTCGATGACCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPSTCST*SMTLRA
Trigger: AGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTAAGCACTTGCTCCACATaGTCGATGACCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLSTCST*SMTLRA
Trigger: AGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAGGCCTTGCACATATATaGACACACTGGTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLGLAHI*THWCKV
Trigger: GACTTTGCACCAGTGTGTGCATATATGTGCAAGGCC...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTACCACTTGAAGGGCCTTaGACATATATGCACACACTG +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLPLEGP*TYMHTL
Trigger: CAGTGTGTGCATATATGTGCAAGGCCCTTCAAGTGG...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTGCTGCCAGAAAGGCCTaGGGTCTCCCACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCAARKA*GLPPWE
Trigger: CTCCCAGGGTGGGAGACCCCAGGCCTTTCTGGCAGC...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCACCGTGTATCTGGGCATaGCTCCGCTGCAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGLDSGICSILYFSMYGAPCIWA*LRCSLR
Trigger: CCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGG...TGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGTGAGCTGCGCGTCCTaGCAGGGCACTGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ERGLDSGICSILYFSMYGVSCAS*QGTASH
Trigger: ATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCAC...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCTACAGCTTCACAGCCCAGGGATGTGATCATCTGCGTCCCATTGATGAGTGCCACTGGTTTCAATCCATaGGCTTCTAGCACGTATTTA +
Preference number: 4 (lower is better)
Translates to: STASQPRDVIICVPLMSATGFNP*ASSTYL
Trigger: TAAATACGTGCTAGAAGCCCATGGATTGAAACCAGT...GGCACTCATCAATGGGACGCAGATGATCACATCCCTGGGCTGTGAAGCTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGTGTCAAAGGCTTTGGTaGTGCCCTTCAGCACCTCAA +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQECQRLW*CPSAPQ
Trigger: TTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACA...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGAAGGTGTATGCATCCTaGACGCGATCACAGAACCTG +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQEKVYAS*TRSQNL
Trigger: CAGGTTCTGTGATCGCGTCCAGGATGCATACACCTT...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATAAGGTGTATGCATCCTaGACGCGATCACAGAACCTG +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNKVYAS*TRSQNL
Trigger: CAGGTTCTGTGATCGCGTCCAGGATGCATACACCTT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAAAAGGTGTATGCATCCTaGACGCGATCACAGAACCTG +
Preference number: 4 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKKVYAS*TRSQNL
Trigger: CAGGTTCTGTGATCGCGTCCAGGATGCATACACCTT...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGGTTCATGGATGCCAATaGCCAAGTAGTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKVHGCQ*PSSLGL
Trigger: AAGCCCTAGACTACTTGGCCATTGGCATCCATGAAC...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGTCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQESTDEG*HRALFS
Trigger: TGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGA...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCACTGCAAGGAGCTCGATaGCCAGCACTTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPLQGAR*PALAPH
Trigger: ATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAG...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGAGAAACTCTATGCCCTaGCAGGCTGCAAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SEKAVGERGLDSGICSILRNSMP*QAARSS
Trigger: CGAGCTCCTTGCAGCCTGCCAGGGCATAGAGTTTCT...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTA +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGPSPAE*LFSGDV
Trigger: TACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGG...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTACTCCGGGATTTTGGTaGATTTCTTGTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: ALQQSAPGHRPSPAEWLFTPGFW*ISCAEI
Trigger: AATTTCTGCACAAGAAATCCACCAAAATCCCGGAGT...AAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCAGTGTCATTTTGACCTaGAGGGCTGCAGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISSVILT*RAAGAE
Trigger: TTCAGCCCCTGCAGCCCTCCAGGTCAAAATGACACT...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTTGCTGTTCTTGTCCCTaGTGGCACCTACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFCCSCP*WHLPAA
Trigger: AGCAGCAGGTAGGTGCCATCAGGGACAAGAACAGCA...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATGTCGGGCTTATTCTTaGTATAGCGCCTCACGGCCT +
Preference number: 4 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPCRAYS*YSASRP
Trigger: AGGCCGTGAGGCGCTATATCAAGAATAAGCCCGACA...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGTCTCAGCTGTTGGGGTaGGCTTTATTTTGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQESQLLG*ALFCSV
Trigger: GACGCTACAAAATAAAGCTCACCCCAACAGCTGAGA...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGTGAGCGTACTAAGTTaGCCTGAAGCTCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCVSVLS*PEAPVA
Trigger: AGCTACAGGAGCTTCAGGTCAACTTAGTACGCTCAC...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538703.5
CDS-3UTR TCA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGACTTTGGCTAAGACATTaGTCCTTAAAGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGLWLRH*SLKPRA
Trigger: TGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAG...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCTGCAGTGAGCTATCATaGACCCAGAGTTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVCSELS*TQSSDH
Trigger: GTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCA...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTTGCAGTGAGCTATCATaGACCCAGAGTTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: SDSGILVDFLCRNCSEKACSELS*TQSSDH
Trigger: GTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCA...AGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATCGATGTCCGGGGCCATaGAGCGATCTTTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYRCPGP*SDLLSR
Trigger: CCTGGATAAAAGATCGCTTCATGGCCCCGGACATCG...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGCTTTGTGCTAAACTaGCTGCCCTCTCATCTGCTA +
Preference number: 4 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWCFVLN*LPSHLL
Trigger: TAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCA...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAAGCCAAGAGGTCATGTaGCCCATCCTTCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQSQEVM*PILHLD
Trigger: GTCCAGATGAAGGATGGGTCACATGACCTCTTGGCT...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCTCCATCCAGACCTGCTaGCAGAAAGGCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DSGICSILYFSMYGAATSSIQTC*QKGLGS
Trigger: AGACCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGA...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCGGGTCTCCAGGGAAATaGCACTGTATCCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISGSPGK*HCILWL
Trigger: TAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCC...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATCAAAGGCTTTGGTGGTaGCCTTCAGCACCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYQRLWW*PSAPQG
Trigger: CCCTTGAGGTGCTGAAGGGCACCACCAAAGCCTTTG...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCAGAAACAAGGGCTGCTaGCGTGCAGTGAGCTATCAT +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVRNKGC*RAVSYH
Trigger: ATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCT...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAACTCAGAAACAAGGGCTaGTGCCGTGCAGTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQLRNKG*CRAVSY
Trigger: ATAGCTCACTGCACGGCAGCAGCCCTTGTTTCTGAG...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTAGCACTTGCTCCACATaGTCGATGACCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFSTCST*SMTLRA
Trigger: AGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATAGCACTTGCTCCACATaGTCGATGACCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYSTCST*SMTLRA
Trigger: AGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGGACGTAGAAACTCTATaGCCTGGCAGGCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVDVETL*PGRLQG
Trigger: TCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTC...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCACCACTTGAAGGGCCTTaGACATATATGCACACACTG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLAPLEGP*TYMHTL
Trigger: CAGTGTGTGCATATATGTGCAAGGCCCTTCAAGTGG...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGACCGTGTATCTGGGCATaGCTCCGCTGCAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ERGLDSGICSILYFSMYGPCIWA*LRCSLR
Trigger: CCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGG...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTCGTGCACCGTGTATCTaGGCATGGCTCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCRAPCI*AWLRCS
Trigger: GCTGCAGCGGAGCCATGCCCAGATACACGGTGCACG...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AAAGCCAAGAGCATCCGACACCTCTCAGGACTTAGTGGTTTCCCAACACCTGAATCCTTCTGGTTGAGATaGAATGAAGTCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: KAKSIRHLSGLSGFPTPESFWLR*NEVRRH
Trigger: ATGTCTCCTGACTTCATTCCATCTCAACCAGAAGGA...TTCAGGTGTTGGGAAACCACTAAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTTGTCAAAGGCTTTGGTaGTGCCCTTCAGCACCTCAA +
Preference number: 4 (lower is better)
Translates to: SDSGILVDFLCRNCSEKACQRLW*CPSAPQ
Trigger: TTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACA...AGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTAAGGTGTATGCATCCTaGACGCGATCACAGAACCTG +
Preference number: 4 (lower is better)
Translates to: SDSGILVDFLCRNCSEKAKVYAS*TRSQNL
Trigger: CAGGTTCTGTGATCGCGTCCAGGATGCATACACCTT...AGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTAAGGTGTATGCATCCTaGACGCGATCACAGAACCTG +
Preference number: 4 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCKVYAS*TRSQNL
Trigger: CAGGTTCTGTGATCGCGTCCAGGATGCATACACCTT...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAAGTAGTCTAGGGCTTTaGCTGGGTATTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLASSLGL*LGIHHG
Trigger: TCCATGGTGAATACCCAGCCAAAGCCCTAGACTACT...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTCCGTGGCTGCGCTGGTaGAGAGGGAGTCAACAGACG +
Preference number: 4 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCPWLRW*RGSQQT
Trigger: CGTCTGTTGACTCCCTCTCCACCAGCGCAGCCACGG...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTCTGCAAGGAGCTCGATaGCCAGCACTTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFLQGAR*PALAPH
Trigger: ATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAG...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTA +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQPSPAE*LFSGDV
Trigger: TACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGG...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAGACCCATCCTTCATCTaGACAGATACACTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLDPSFI*TDTLKP
Trigger: TGGCTTAAGTGTATCTGTCCAGATGAAGGATGGGTC...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCCCTCTCCACCAGCTGTaGTTTTTAGAGCCACGGTTT +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVPLHQL*FLEPRF
Trigger: AAACCGTGGCTCTAAAAACCACAGCTGGTGGAGAGG...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
3UTR CAA 72 bp TCCAGGGAAATGCCACTGTATCCTTTGGCTAAGACATaGATCCTTAAAGCCAAGAGCATCCGACACCTCTCA +
Preference number: 4 (lower is better)
Translates to: SREMPLYPLAKT*ILKAKSIRHLS
Trigger: TGAGAGGTGTCGGATGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGGATACAGTGGCATTTCCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CAA 72 bp GGCAGGCAGGAGGCATTAAACATTTCTATGACTTGTTaGAGGGTCTCCAGGGAAATGCCACTGTATCCTTTG +
Preference number: 4 (lower is better)
Translates to: GRQEALNISMTC*RVSREMPLYPL
Trigger: CAAAGGATACAGTGGCATTTCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTTAATGCCTCCTGCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
3UTR CAA 72 bp ATAGGGCAGGCAGGAGGCATTAAACATTTCTATGACTaGTTTGAGGGTCTCCAGGGAAATGCCACTGTATCC +
Preference number: 4 (lower is better)
Translates to: IGQAGGIKHFYD*FEGLQGNATVS
Trigger: GGATACAGTGGCATTTCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTTAATGCCTCCTGCCTGCCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTCTGGTTGAGATGGAATaGAGTCAGGAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCLVEME*SQETWH
Trigger: ATGCCATGTCTCCTGACTTCATTCCATCTCAACCAG...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCCTGGTTGAGATGGAATaGAGTCAGGAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVLVEME*SQETWH
Trigger: ATGCCATGTCTCCTGACTTCATTCCATCTCAACCAG...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCATTTCTGATGGGTGGTaGTCTGAGTCCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVISDGW*SESKSD
Trigger: GTCACTCTTGGACTCAGATCACCACCCATCAGAAAT...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAACGATCACAGAACCTGTaGCTCTCTGCTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKRSQNL*LSAISD
Trigger: ATCAGAAATAGCAGAGAGTCACAGGTTCTGTGATCG...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAACGATTCTTCTCTCACTaGTTGCAGCAAGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKRFFSH*LQQVHG
Trigger: TCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCG...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCACGATTCTTCTCTCACTaGTTGCAGCAAGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLARFFSH*LQQVHG
Trigger: TCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCG...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTCGATTCTTCTCTCACTaGTTGCAGCAAGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFRFFSH*LQQVHG
Trigger: TCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCG...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTATGCAGTGAGCTATCATaGACCCAGAGTTCAGACCAC +
Preference number: 4 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLCSELS*TQSSDH
Trigger: GTGGTCTGAACTCTGGGTTCATGATAGCTCACTGCA...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR TCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATACCTGGTGGGTCTTaGACCACGACAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCIPGGS*TTTTGT
Trigger: TGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTAT...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS-3UTR TCA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCAATACCTGGTGGGTCTTaGACCACGACAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPIPGGS*TTTTGT
Trigger: TGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTAT...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS-3UTR TCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTAGCCAAGAGGTCATGTaGCCCATCCTTCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFSQEVM*PILHLD
Trigger: GTCCAGATGAAGGATGGGTCACATGACCTCTTGGCT...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAATGGCAGCCCACGGATaGCAATGCACAAACCTCATT +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQMAAHG*QCTNLI
Trigger: AATGAGGTTTGTGCATTGTCATCCGTGGGCTGCCAT...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTCGGGGTGTGGTCAGCTaGTGTCCCTTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFRGVVS*CPFGFC
Trigger: ACAAAAACCAAAGGGACAGCAGCTGACCACACCCCG...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTCGTCCCATTGATGAGTaGCAGGCCCTCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCRPIDE*QALFWF
Trigger: AAACCAAAAGAGGGCCTGGCACTCATCAATGGGACG...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAGCAGCGCAAGGTGTATaGATCCTGGACGCGATCACA +
Preference number: 4 (lower is better)
Translates to: AVGERGLDSGICSILYFSAAQGV*ILDAIT
Trigger: TGTGATCGCGTCCAGGATGCATACACCTTGCGCTGC...TGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTACATAGGATTATCTGTTaGGCTGTTCAGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLHRIIC*AVQFCG
Trigger: ACCACAGAACTGAACAGCGCAACAGATAATCCTATG...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGCAGCAAGTTCATGGATaGCAATGGCCAAGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: PGFWWISCAEIAVKRLLEQQVHG*QWPSSL
Trigger: TAGACTACTTGGCCATTGGCATCCATGAACTTGCTG...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGACGTAGAAACTCTATaGCCTGGCAGGCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVDVETL*PGRLQG
Trigger: TCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTC...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCGACGTAGAAACTCTATaGCCTGGCAGGCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSDVETL*PGRLQG
Trigger: TCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTC...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp GGATTGCAGAGCCGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGTTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GLQSRSILLSLIAASSWMFLCRN*SEKAVG
Trigger: TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAA...CATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCGGCTCTGCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTGACTGCCCTCTCATCTaGTACTTCATGACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCDCPLI*YFMTKP
Trigger: GGGCTTTGTCATGAAGTAGCAGATGAGAGGGCAGTC...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCATCCCTTGAAGGCGTGTaGTGTCAGTTACTAATAGAG +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLASLEGV*CQLLIE
Trigger: CTCTATTAGTAACTGACAGCACACGCCTTCAAGGGA...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTATATTCAACCGTTGGCTaGACCCTGGTGCACTTAGTG +
Preference number: 4 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLYSTVG*TLVHLV
Trigger: CACTAAGTGCACCAGGGTGCAGCCAACGGTTGAATA...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGTGGCTACCGGGGTGTaGTCAGCTGCTGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: ERGLDSGICSILYFSMYGVATGV*SAAVPL
Trigger: CAAAGGGACAGCAGCTGACCACACCCCGGTAGCCAC...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATACCTCTTCTCAGCTGTTaGGGTGAGCTTTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIPLLSC*GELYFV
Trigger: TACAAAATAAAGCTCACCCCAACAGCTGAGAAGAGG...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTTGTCAAAGGCTTTGGTaGTGCCCTTCAGCACCTCAA +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCCQRLW*CPSAPQ
Trigger: TTGAGGTGCTGAAGGGCACCACCAAAGCCTTTGACA...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATCAGTGTCAAAGGCTTTaGTGGTGCCCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYQCQRL*WCPSAP
Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTTGACACTG...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCTCATTCACCACACCATaGACCTGTGGACAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: DSGICSILYFSMYGAATSSFTTP*TCGQQR
Trigger: GCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATGA...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGGCTGGGTATTCACCATaGAAGTTTCCTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQEAGYSP*KFPPET
Trigger: AGTTTCTGGAGGAAACTTCCATGGTGAATACCCAGC...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGCTGGGTATTCACCATaGAAGTTTCCTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNAGYSP*KFPPET
Trigger: AGTTTCTGGAGGAAACTTCCATGGTGAATACCCAGC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp TCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTCATGGATGCCAATaGCCAAGTAGTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SDSGILVDFLCRNCSEKAVHGCQ*PSSLGL
Trigger: AAGCCCTAGACTACTTGGCCATTGGCATCCATGAAC...AGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS-3UTR CCA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTATCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLSTDEG*HRALFS
Trigger: TGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGA...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp CGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGCCAATGGCCAAGACTCCGGGATTTTGGTaGATTTCTTGTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: RSILLSLIAASSWMPMAKTPGFW*ISCAEI
Trigger: AATTTCTGCACAAGAAATCCACCAAAATCCCGGAGT...CTTGGCCATTGGCATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGCAGACTCCGGGATTTTaGTGGATTTCTTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWQTPGF*WISCAE
Trigger: TTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTG...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATACATATATGCACACACTaGTGCAAAGTCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIHICTH*CKVTEL
Trigger: AAGCTCTGTGACTTTGCACCAGTGTGTGCATATATG...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCGACATCTTGCAGGGGTaGGGAGGCATCAATGAACCT +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSDILQG*GGINEP
Trigger: AGGTTCATTGATGCCTCCCCACCCCTGCAAGATGTC...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGGTTCATGGATGCCAATaGCCAAGTAGTCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SEKAVGERGLDSGICSILVHGCQ*PSSLGP
Trigger: TGGCCCTAGACTACTTGGCCATTGGCATCCATGAAC...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546999.5
3UTR CAA 72 bp TGTTTGAGGGTCTCCAGGGAAATGCCACTGTATCCTTaGGCTAAGACATTGATCCTTAAAGCCAAGAGCATC +
Preference number: 4 (lower is better)
Translates to: CLRVSREMPLYP*AKTLILKAKSI
Trigger: GATGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCCTCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTTCTCAGCTGTTGGGGTaGGCTTTATTTTGTAGCGTC +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCSQLLG*ALFCSV
Trigger: GACGCTACAAAATAAAGCTCACCCCAACAGCTGAGA...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTAGCCCAAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICSPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTTGGGCT...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGACGATTCTTCTCTCACTaGTTGCAGCAAGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGRFFSH*LQQVHG
Trigger: TCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCG...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TGTTTATTATATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTGCTGCTGCCGTGCAGTaGGCTATCATGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: CLLYGFLVVLQVVAQIPFAAAVQ*AIMNPE
Trigger: CTCTGGGTTCATGATAGCTCACTGCACGGCAGCAGC...AAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATATAATAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR TCA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGTGGAGAAAGAGGTCTTaGTTCTGGAATATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQEWRKRS*FWNMLH
Trigger: ATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCA...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGAGAAAGAGGTCTTaGTTCTGGAATATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFWRKRS*FWNMLH
Trigger: ATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCA...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTCATCTGCTACTTCATaGCAAAGCCCATTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFSSATS*QSPLKV
Trigger: GACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGA...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp TTGGCTAAGACATTGATCCTTAAAGCCAAGAGCATCCGACACCTCTCAGGACTTTCATCTGCTACTTCATaGCAAAGCCCATTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LAKTLILKAKSIRHLSGLSSATS*QSPLKV
Trigger: GACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGA...AAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTTGCTTTGTGCTAAACTaGCTGCCCTCTCATCTGCTA +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCCFVLN*LPSHLL
Trigger: TAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCA...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAATACCTGGTGGGTCTTaGACCACGACAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVIPGGS*TTTTGT
Trigger: TGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTAT...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAACGGTTTCAGACCACTTaGAGGGCCTTGCACATATAT +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQRFQTT*RALHIY
Trigger: ATATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCG...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTGCAGCGCAAGGTGTATaGATCCTGGACGCGATCACA +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICAAQGV*ILDAIT
Trigger: TGTGATCGCGTCCAGGATGCATACACCTTGCGCTGC...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAACATAGGATTATCTGTTaGGCTGTTCAGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKHRIIC*AVQFCG
Trigger: ACCACAGAACTGAACAGCGCAACAGATAATCCTATG...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGACAGCAAGTTCATGGATaGCAATGGCCAAGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGQQVHG*QWPSSL
Trigger: TAGACTACTTGGCCATTGGCATCCATGAACTTGCTG...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCCAGCAAGTTCATGGATaGCAATGGCCAAGTAGTCTA +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVQQVHG*QWPSSL
Trigger: TAGACTACTTGGCCATTGGCATCCATGAACTTGCTG...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCAGAAACAAGGGCTGCTaGCGTGCAGTGAGCTATCAT +
Preference number: 4 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSRNKGC*RAVSYH
Trigger: ATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCT...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp TGTTTATTATATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTCCTGAGGGCTTTCCTTaGTGCCCATCCTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: CLLYGFLVVLQVVAQIPFPEGFP*CPSSHG
Trigger: TCCATGGGAGGATGGGCAGCAAGGAAAGCCCTCAGG...AAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATATAATAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR GCA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATATTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIFLCRN*SEKAVG
Trigger: TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAA...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAGTTCATGGATGCCAATaGCCAAGTAGTCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQVHGCQ*PSSLGL
Trigger: AAGCCCTAGACTACTTGGCCATTGGCATCCATGAAC...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTCCTCTCCACCAGCTGTaGTTTTTAGAGCCACGGTTT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFPLHQL*FLEPRF
Trigger: AAACCGTGGCTCTAAAAACCACAGCTGGTGGAGAGG...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGATGCTGTTCTTGTCCCTaGTGGCACCTACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ERGLDSGICSILYFSMYGCCSCP*WHLPAA
Trigger: AGCAGCAGGTAGGTGCCATCAGGGACAAGAACAGCA...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS-3UTR TCA 90 bp GCATTAAACATTTCTATGACTTGTTTGAGGGTCTCCAGGGAAATGCCACTGTATCTGGTTGAGATGGAATaGAGTCAGGAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: ALNISMTCLRVSREMPLYLVEME*SQETWH
Trigger: ATGCCATGTCTCCTGACTTCATTCCATCTCAACCAG...ATACAGTGGCATTTCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTTAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCACGTACTAAGTTGACCTaGAGCTCCTGTAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPRTKLT*SSCSLL
Trigger: CAATAAGCTACAGGAGCTTCAGGTCAACTTAGTACG...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538703.5
CDS-3UTR TCA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCCTTTGGCTAAGACATTaGTCCTTAAAGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVLWLRH*SLKPRA
Trigger: TGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAG...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGACTTTGGCTAAGACATTaGTCCTTAAAGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGLWLRH*SLKPRA
Trigger: TGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAG...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTTGCTTTGTGCTAAACTaGCTGCCCTCTCATCTGCTA +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFCFVLN*LPSHLL
Trigger: TAGCAGATGAGAGGGCAGTCAGTTTAGCACAAAGCA...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAACCTCCCTGGATTTCTaGACCCTCTTCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AVGERGLDSGICSILYFSTSLDF*TLFSAV
Trigger: AACAGCTGAGAAGAGGGTGCAGAAATCCAGGGAGGT...TGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCGGGTCTCCAGGGAAATaGCACTGTATCCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: DSGICSILYFSMYGAATSGSPGK*HCILWL
Trigger: TAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCC...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCATAGGATTATCTGTTaGGCTGTTCAGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISHRIIC*AVQFCG
Trigger: ACCACAGAACTGAACAGCGCAACAGATAATCCTATG...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp GCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAAGAAACAAGGGCTGCTaGCGTGCAGTGAGCTATCAT +
Preference number: 4 (lower is better)
Translates to: AVGERGLDSGICSILYFSRNKGC*RAVSYH
Trigger: ATGATAGCTCACTGCACGGCAGCAGCCCTTGTTTCT...TGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTAGCTTTATGCAGGAGTaGCTACCGGGGTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCSFMQE*LPGCGQ
Trigger: CTGACCACACCCCGGTAGCCACTCCTGCATAAAGCT...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGACCTCTTCTCAGCTGTTaGGGTGAGCTTTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGPLLSC*GELYFV
Trigger: TACAAAATAAAGCTCACCCCAACAGCTGAGAAGAGG...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTTCATTCACCACACCATaGACCTGTGGACAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCSFTTP*TCGQQR
Trigger: GCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATGA...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCATCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AVGERGLDSGICSILYFSSTDEG*HRALFS
Trigger: TGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGA...TGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCTCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: DSGICSILYFSMYGAATSSTDEG*HRALFS
Trigger: TGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGA...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTCTGCAAGGAGCTCGATaGCCAGCACTTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCLQGAR*PALAPH
Trigger: ATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAG...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TGTTTATTATATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTCTGCAAGGAGCTCGATaGCCAGCACTTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: CLLYGFLVVLQVVAQIPFLQGAR*PALAPH
Trigger: ATGTGGAGCAAGTGCTGGCCATCGAGCTCCTTGCAG...AAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATATAATAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGACTCCGGGATTTTGGTaGATTTCTTGTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: PGFWWISCAEIAVKRLLETPGFW*ISCAEI
Trigger: AATTTCTGCACAAGAAATCCACCAAAATCCCGGAGT...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTCAGCATTCCCCAAACTaGAGCGAAGAGCACCATGAG +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICQHSPN*SEEHHE
Trigger: CTCATGGTGCTCTTCGCTCCAGTTTGGGGAATGCTG...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTACGTACTAAGTTGACCTaGAGCTCCTGTAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVRTKLT*SSCSLL
Trigger: CAATAAGCTACAGGAGCTTCAGGTCAACTTAGTACG...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261208.8
CDS-3UTR TCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTCTTTGGCTAAGACATTaGTCCTTAAAGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCLWLRH*SLKPRA
Trigger: TGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAG...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTACGATCACAGAACCTGTaGCTCTCTGCTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVRSQNL*LSAISD
Trigger: ATCAGAAATAGCAGAGAGTCACAGGTTCTGTGATCG...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTCGATCACAGAACCTGTaGCTCTCTGCTATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFRSQNL*LSAISD
Trigger: ATCAGAAATAGCAGAGAGTCACAGGTTCTGTGATCG...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGTCATCTGCTACTTCATaGCAAAGCCCATTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVSSATS*QSPLKV
Trigger: GACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGA...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTACGTACTAAGTTGACCTaGAGCTCCCTGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVRTKLT*SSLFSL
Trigger: AAGAGAAAACAGGGAGCTTCAGGTCAACTTAGTACG...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541929.5
CDS-3UTR GCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTCGGGGTGTGGTCAGCTaGTGTCCCTTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCRGVVS*CPFGFC
Trigger: ACAAAAACCAAAGGGACAGCAGCTGACCACACCCCG...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGGGTCTCCAGGGAAATaGCACTGTATCCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: RGLDSGICSILYFSMYGAGSPGK*HCILWL
Trigger: TAGCCAAAGGATACAGTGGCATTTCCCTGGAGACCC...TGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTAGGGATGTGATCATCTaGGTCCCATTGATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICRDVII*VPLMSA
Trigger: GGCACTCATCAATGGGACGCAGATGATCACATCCCT...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGACGTAGAAACTCTATaGCCTGGCAGGCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ERGLDSGICSILYFSMYGDVETL*PGRLQG
Trigger: TCCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTC...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGATTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGFLCRN*SEKAVG
Trigger: TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAA...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTAGCTCAAATACCTTTTTaGTCATTCCCAAGGAATGGC +
Preference number: 4 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLAQIPF*SFPRNG
Trigger: GCCATTCCTTGGGAATGAGCAAAAAGGTATTTGAGC...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAACTGGTTTCAATCCATaGGCTTCTAGCACGTATTTA +
Preference number: 4 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGTGFNP*ASSTYL
Trigger: TAAATACGTGCTAGAAGCCCATGGATTGAAACCAGT...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTGCTGGGTATTCACCATaGAAGTTTCCTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFAGYSP*KFPPET
Trigger: AGTTTCTGGAGGAAACTTCCATGGTGAATACCCAGC...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp TGTTTATTATATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTCCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTA +
Preference number: 4 (lower is better)
Translates to: CLLYGFLVVLQVVAQIPFPSPAE*LFSGDV
Trigger: TACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGG...AAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATATAATAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCACTCCGGGATTTTGGTaGATTTCTTGTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISTPGFW*ISCAEI
Trigger: AATTTCTGCACAAGAAATCCACCAAAATCCCGGAGT...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATCAGACTCCGGGATTTTaGTGGATTTCTTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYQTPGF*WISCAE
Trigger: TTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTG...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATAGGCACATACAATTGTaGTTATTCTTCTCACCCTTA +
Preference number: 4 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNRHIQL*LFFSPL
Trigger: TAAGGGTGAGAAGAATAACCACAATTGTATGTGCCT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
3UTR CAA 72 bp CTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTaGCTCATTCCCAAGGAATGGCCAGAAAACAATAGA +
Preference number: 4 (lower is better)
Translates to: LSGAASCCSNTF*LIPKEWPENNR
Trigger: TCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR TCA 90 bp AGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAATTTCTGATGGGTGGTaGTCTGAGTCCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RGLDSGICSILYFSMYGAISDGW*SESKSD
Trigger: GTCACTCTTGGACTCAGATCACCACCCATCAGAAAT...TGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTGGAGAAAGAGGTCTTaGTTCTGGAATATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: EKAVGERGLDSGICSILYWRKRS*FWNMLH
Trigger: ATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCA...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTCACTTAAGCCATCCCTaGAGGTCCTTTATCTTCTCG +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICHLSHP*RSFIFS
Trigger: CGAGAAGATAAAGGACCTTCAGGGATGGCTTAAGTG...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTAGGGATGTGATCATCTaGGTCCCATTGATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCRDVII*VPLMSA
Trigger: GGCACTCATCAATGGGACGCAGATGATCACATCCCT...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCAGATGTTCTTCACAAATaGTATTGTATCATTCACCAC +
Preference number: 4 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLADVLHK*YCIIHH
Trigger: GTGGTGAATGATACAATAGCATTTGTGAAGAACATC...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR GCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTGGCCTTGCACATATATaGACACACTGGTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICGLAHI*THWCKV
Trigger: GACTTTGCACCAGTGTGTGCATATATGTGCAAGGCC...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTTCCTTCTGGTTGAGATaGAATGAAGTCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFSFWLR*NEVRRH
Trigger: ATGTCTCCTGACTTCATTCCATCTCAACCAGAAGGA...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGATCAACAGACGAGGGATaGCACAGAGCCTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: ERGLDSGICSILYFSMYGSTDEG*HRALFS
Trigger: TGAGAACAAGGCTCTGTGCCATCCCTCGTCTGTTGA...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCCAGACTCCGGGATTTTaGTGGATTTCTTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DSGICSILYFSMYGAATSQTPGF*WISCAE
Trigger: TTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTG...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCAGGCACATACAATTGTaGTTATTCTTCTCACCCTTA +
Preference number: 4 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISRHIQL*LFFSPL
Trigger: TAAGGGTGAGAAGAATAACCACAATTGTATGTGCCT...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR TCA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAACTTCAGTTTCCACCTaGCAGGTTGTAAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVTSVST*QVVNLK
Trigger: CTTTAGATTTACAACCTGTCAGGTGGAAACTGAAGT...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp AGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCACGTACTAAGTTGACCTaGAGCTCCCTGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RGLDSGICSILYFSMYGARTKLT*SSLFSL
Trigger: AAGAGAAAACAGGGAGCTTCAGGTCAACTTAGTACG...TGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCCATAGGATTATCTGTTaGGCTGTTCAGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: DSGICSILYFSMYGAATSHRIIC*AVQFCG
Trigger: ACCACAGAACTGAACAGCGCAACAGATAATCCTATG...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR GCA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTATTCTTGTGCAGAAATTaGAGTGAAAAGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVFLCRN*SEKAVG
Trigger: TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAA...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTACTGGTTTCAATCCATaGGCTTCTAGCACGTATTTA +
Preference number: 4 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFTGFNP*ASSTYL
Trigger: TAAATACGTGCTAGAAGCCCATGGATTGAAACCAGT...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTCAGACTCCGGGATTTTaGTGGATTTCTTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICQTPGF*WISCAE
Trigger: TTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTG...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAAGGCACATACAATTGTaGTTATTCTTCTCACCCTTA +
Preference number: 4 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQRHIQL*LFFSPL
Trigger: TAAGGGTGAGAAGAATAACCACAATTGTATGTGCCT...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR TCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTCTTTGGCTAAGACATTaGTCCTTAAAGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICLWLRH*SLKPRA
Trigger: TGCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAG...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTGATGTTCTTCACAAATaGTATTGTATCATTCACCAC +
Preference number: 4 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCDVLHK*YCIIHH
Trigger: GTGGTGAATGATACAATAGCATTTGTGAAGAACATC...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTTCCCATGTAAGCATTTaGGGGATACGTGTAGTGATA +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICSHVSI*GIRVVI
Trigger: TATCACTACACGTATCCCCCAAATGCTTACATGGGA...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp TATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTTGCTCATTCCTCATTCCCAAGGAATaGCCAGAAAACAATAGAATA +
Preference number: 4 (lower is better)
Translates to: YGFLVVLQVVAQIPFCSFLIPKE*PENNRI
Trigger: TATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAG...GAATGAGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR TCA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGATCATCTGCTACTTCATaGCAAAGCCCATTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: ERGLDSGICSILYFSMYGSSATS*QSPLKV
Trigger: GACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGA...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR TCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTACTTCAGTTTCCACCTaGCAGGTTGTAAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICTSVST*QVVNLK
Trigger: CTTTAGATTTACAACCTGTCAGGTGGAAACTGAAGT...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CCA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTACTGGTTTCAATCCATaGGCTTCTAGCACGTATTTA +
Preference number: 4 (lower is better)
Translates to: MITITERRLVNPQRFLICTGFNP*ASSTYL
Trigger: TAAATACGTGCTAGAAGCCCATGGATTGAAACCAGT...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR GCA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCGATGTTCTTCACAAATaGTATTGTATCATTCACCAC +
Preference number: 4 (lower is better)
Translates to: DSGICSILYFSMYGAATSDVLHK*YCIIHH
Trigger: GTGGTGAATGATACAATAGCATTTGTGAAGAACATC...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS GCA 90 bp CCGGCCCAGCCAGCCCACAGTGAGCTGCGCGTCCTGGCAGGGCACTaGCAGCCATTCCCCACGTACGTGCACCGTGTATCTGGGCATGGC +
Preference number: 5 (lower is better)
Translates to: PAQPAHSELRVLAGH*QPFPTYVHRVSGHG
Trigger: GCCATGCCCAGATACACGGTGCACGTACGTGGGGAATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS CCA 90 bp CTCACGGCCTCCCGGCCCAGCCAGCCCACAGTGAGCTGCGCGTCCTaGCAGGGCACTGCCAGCCATTCCCCACGTACGTGCACCGTGTAT +
Preference number: 5 (lower is better)
Translates to: LTASRPSQPTVSCAS*QGTASHSPRTCTVY
Trigger: ATACACGGTGCACGTACGTGGGGAATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGGGCCGGGAGGCCGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS GCA 90 bp AGCTGCGCGTCCTGGCAGGGCACTGCCAGCCATTCCCCACGTACGTaGACCGTGTATCTGGGCATGGCTCCGCTGCAGCCTGAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SCASWQGTASHSPRT*TVYLGMAPLQPEVL
Trigger: GAGGACCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGGTGCACGTACGTGGGGAATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS CCA 90 bp GGCAGGGCACTGCCAGCCATTCCCCACGTACGTGCACCGTGTATCTaGGCATGGCTCCGCTGCAGCCTGAGGTCCTCAGCTGGTCACAGG +
Preference number: 5 (lower is better)
Translates to: GRALPAIPHVRAPCI*AWLRCSLRSSAGHR
Trigger: CCTGTGACCAGCTGAGGACCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGGTGCACGTACGTGGGGAATGGCTGGCAGTGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS CCA 90 bp GCACTGCCAGCCATTCCCCACGTACGTGCACCGTGTATCTGGGCATaGCTCCGCTGCAGCCTGAGGTCCTCAGCTGGTCACAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: ALPAIPHVRAPCIWA*LRCSLRSSAGHRRG
Trigger: TCCCCTCCTGTGACCAGCTGAGGACCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGGTGCACGTACGTGGGGAATGGCTGGCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGGAAGGCAGGCAGCTCACTGAGGGAGGGATTGCAGAGCCGCTCGATTCTTCTCTCGAGCCGGTCCTCGTaGTCCAGCAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RKAGSSLREGLQSRSILLSSRSS*SSRPRP
Trigger: GGGCCTGGGCCTGCTGGACAACGAGGACCGGCTCGA...GAGAAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGTCGAGCCGGTCCTCGTaGTCCAGCAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRSSRSS*SSRPRP
Trigger: GGGCCTGGGCCTGCTGGACAACGAGGACCGGCTCGA...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS GCA 90 bp TCGTTGTCCAGCAGGCCCAGGCCCTTGCACCGGCGCACAAGGAAGTaGGCGTCATCCACGGAGGTGAAGCCACCATTGTCGGGCTTATTC +
Preference number: 5 (lower is better)
Translates to: SLSSRPRPLHRRTRK*ASSTEVKPPLSGLF
Trigger: GAATAAGCCCGACAATGGTGGCTTCACCTCCGTGGATGACGCGCACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCTGGACAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS GCA 90 bp GCCAAGGAGCCAGCTTGCCTTCTGCTCCAGGAGCAGCCTGTGGGCTaGCTCGATGTCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: AKEPACLLLQEQPVG*LDVRGHEAIFYPGP
Trigger: AGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATCGAGGCAGCCCACAGGCTGCTCCTGGAGCAGAAGGCAAGCTGGCTCCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp GGCTGCCTCGATGTCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACAGCAGGCCCAGGCCCTaGCACCGGCGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: GCLDVRGHEAIFYPGPYNSRPRP*HRRTRK
Trigger: CTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCT...GTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATCGAGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS GCA 90 bp CTGCAGCCTGAGGTCCTCAGCTGGTCACAGGAGGGGAGAGCTTTATaGAGGAGTGGCTACCGGGGTGTGGTCAGCTGCTGTCCCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LQPEVLSWSQEGRAL*RSGYRGVVSCCPFG
Trigger: ACCAAAGGGACAGCAGCTGACCACACCCCGGTAGCCACTCCTGCATAAAGCTCTCCCCTCCTGTGACCAGCTGAGGACCTCAGGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS GCA 90 bp GCCATTCCCCACGTACGTGCACCGTGTATCTGGGCATGGCTCCGCTaGAGCCTGAGGTCCTCAGCTGGTCACAGGAGGGGAGAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: AIPHVRAPCIWAWLR*SLRSSAGHRRGELY
Trigger: ATAAAGCTCTCCCCTCCTGTGACCAGCTGAGGACCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGGTGCACGTACGTGGGGAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS CCA 90 bp GAGCCTCCTGTCCACTTTCCATCCAGACCTGCTGCCAGAAAGGCCTaGGGTCTCCCACCCTGGGAGGTGCTGTTCTTGTCCCTGATGGCA +
Preference number: 5 (lower is better)
Translates to: EPPVHFPSRPAARKA*GLPPWEVLFLSLMA
Trigger: TGCCATCAGGGACAAGAACAGCACCTCCCAGGGTGGGAGACCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGAAAGTGGACAGGAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp GCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTGGTTGTTTAGCAGGCCCAGGCCCTaGCACCGGCGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ALQQSAPGHRPSPAEWLFSRPRP*HRRTRK
Trigger: CTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCT...AAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATCGAGCCGGTCCTCGTaGTCCAGCAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGSSRSS*SSRPRP
Trigger: GGGCCTGGGCCTGCTGGACAACGAGGACCGGCTCGA...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AAAGCCAAGAGCATCCGACACCTCTCAGGACTTAGTGGTTTCCCAACACCTGAATCGAGCCGGTCCTCGTaGTCCAGCAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KAKSIRHLSGLSGFPTPESSRSS*SSRPRP
Trigger: GGGCCTGGGCCTGCTGGACAACGAGGACCGGCTCGA...TTCAGGTGTTGGGAAACCACTAAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGGAAGGCAGGCAGCTCACTGAGGGAGGGATTGCAGAGCCGCTCGATTCTTCTCATCATCTGCGTCCCATaGATGAGTGCCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: RKAGSSLREGLQSRSILLIICVP*MSARPS
Trigger: AGAGGGCCTGGCACTCATCAATGGGACGCAGATGAT...GAGAAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGCTCGATGGCCAGCACTaGCTCCACATGCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRLDGQH*LHMLDD
Trigger: GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAG...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATTGGGAGGTGCTGTTCTaGTCCCTGATGGCACCTACC +
Preference number: 5 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNWEVLF*SLMAPT
Trigger: GGTAGGTGCCATCAGGGACAAGAACAGCACCTCCCA...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GGAGTGGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTGCAAGGTGGGAGGTGCTGTTCTaGTCCCTGATGGCACCTACC +
Preference number: 5 (lower is better)
Translates to: GVVVFRGRRNSMPWQAARWEVLF*SLMAPT
Trigger: GGTAGGTGCCATCAGGGACAAGAACAGCACCTCCCA...CCTTGCAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CAA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCACTTCCACGAACTCGTaGTTCTCTAGGGCCACCTCG +
Preference number: 5 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSTSTNS*FSRATS
Trigger: CGAGGTGGCCCTAGAGAACAACGAGTTCGTGGAAGT...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCATCATCTGCGTCCCATaGATGAGTGCCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSIICVP*MSARPS
Trigger: AGAGGGCCTGGCACTCATCAATGGGACGCAGATGAT...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCTCAGTGTCAAAGGCTTaGGTGGTGCCCTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSSVSKA*VVPFST
Trigger: GGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGA...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGTCAGTGTCAAAGGCTTaGGTGGTGCCCTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: SGAMKRSFIQGLTTERTRSVSKA*VVPFST
Trigger: GGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGA...CCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCACTCGATGGCCAGCACTaGCTCCACATGCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSLDGQH*LHMLDD
Trigger: GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAG...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGACTCGATGGCCAGCACTaGCTCCACATGCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGLDGQH*LHMLDD
Trigger: GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAG...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAAAGCAGGCCCAGGCCCTaGCACCGGCGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKSRPRP*HRRTRK
Trigger: CTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCT...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATTCACTGAGGGAGGGATaGCAGAGCCGCTCGATTCTT +
Preference number: 5 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNSLREG*QSRSIL
Trigger: AAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGA...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTGCCCATCCTGGATGGCACAGAGCCTaGTTCTCAGAAACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: STCSTCSMTLRAFLAAHPGWHRA*FSETRA
Trigger: AGCCCTTGTTTCTGAGAACAAGGCTCTGTGCCATCC...AGGATGGGCAGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS CCA 90 bp ACCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGACGTAGAAACTCTATGCCCTGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TLQQSAPGHRPSPAE*LFSGDVETLCPGRL
Trigger: CAGCCTGCCAGGGCATAGAGTTTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538703.5
CDS-3UTR CAA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCAGCAGGCCCAGGCCCTaGCACCGGCGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISSRPRP*HRRTRK
Trigger: CTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCT...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp AGCACTTGCTCCACATGCTCGATGACCCTGAGGGCTTTCCTTGCTGCCCATCCTAATACCTGGTGGGTCTaGAACCACGACAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: STCSTCSMTLRAFLAAHPNTWWV*NHDNRN
Trigger: GTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT...AGGATGGGCAGCAAGGAAAGCCCTCAGGGTCATCGAGCATGTGGAGCAAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CAA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATGGGAGGTGCTGTTCTaGTCCCTGATGGCACCTACC +
Preference number: 5 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGWEVLF*SLMAPT
Trigger: GGTAGGTGCCATCAGGGACAAGAACAGCACCTCCCA...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS-3UTR CAA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAAAGCAGGCCCAGGCCCTaGCACCGGCGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQSRPRP*HRRTRK
Trigger: CTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCT...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTATCGAGCCGGTCCTCGTaGTCCAGCAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVSSRSS*SSRPRP
Trigger: GGGCCTGGGCCTGCTGGACAACGAGGACCGGCTCGA...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GCTGCGCTGGTGGAGAGGGAGTCAACAGACGAGGGATGGCACAGAGCCTTGTTCATTTCTATGACTTGTTaGAGGGTCTCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: AALVERESTDEGWHRALFISMTC*RVSREM
Trigger: CATTTCCCTGGAGACCCTCAAACAAGTCATAGAAAT...GAACAAGGCTCTGTGCCATCCCTCGTCTGTTGACTCCCTCTCCACCAGCGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGGGATGGCACAGAGCCTaGTTCTCAGAAACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEGWHRA*FSETRA
Trigger: AGCCCTTGTTTCTGAGAACAAGGCTCTGTGCCATCC...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGACTCGATGGCCAGCACTaGCTCCACATGCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGLDGQH*LHMLDD
Trigger: GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAG...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TCCCCAAACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATAATACCTGGTGGGTCTaGAACCACGACAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: SPNWSEEHHETTGGYWLNNTWWV*NHDNRN
Trigger: GTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT...ATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTTTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS GCA 90 bp AGCACAGTTGGTGTCCAACCTGGGGCAATTGCTGCAGATAGAAGCTaGTACGAGTCTTACGTATTTAGCATCAGCCCAGCCACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: STVGVQPGAIAADRS*YESYVFSISPATLR
Trigger: CCGAAGAGTGGCTGGGCTGATGCTAAATACGTAAGACTCGTAGCAGCTTCTATCTGCAGCAATTGCCCCAGGTTGGACACCAACTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549376.1
CDS-3UTR CAA 90 bp ATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGACTTCCACGAACTCGTaGTTCTCTAGGGCCACCTCG +
Preference number: 5 (lower is better)
Translates to: IFYPGPYNRAHQVIDLLQTSTNS*FSRATS
Trigger: CGAGGTGGCCCTAGAGAACAACGAGTTCGTGGAAGT...CTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGCCACGGCCTTTGGCTAAGACATaGATCCTTAAAGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: GGKCVCPPLHQLWFLEPRPLAKT*ILKAKS
Trigger: GCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGG...CCGTGGCTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGAAAAAGCAACTTCAATTaGCCCACGGTGAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGKSNFN*PTVRSK
Trigger: CTTCGACCTCACCGTGGGCAAATTGAAGTTGCTTTT...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGCCAATGGCCAAGTCACTGAGGGAGGGATaGCAGAGCCGCTCGATTCTT +
Preference number: 5 (lower is better)
Translates to: RSILLSLIAASSWMPMAKSLREG*QSRSIL
Trigger: AAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGA...CTTGGCCATTGGCATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGGAAGGCAGGCAGCTCACTGAGGGAGGGATTGCAGAGCCGCTCGATTCTTCTCTTGGAGAAAGAGGTCTaGATTCTGGAATATGCTCCA +
Preference number: 5 (lower is better)
Translates to: RKAGSSLREGLQSRSILLLEKEV*ILEYAP
Trigger: TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA...GAGAAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGAGCTGCCTGCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATGAGAGAGTGGGGCAAGGTCTCCACTGGCACCAACGGTTCCTTTCTCTGGGACATAAACTCCTTCTGGTaGAGATGGAATGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: MREWGKVSTGTNGSFLWDINSFW*RWNEVR
Trigger: CCTGACTTCATTCCATCTCAACCAGAAGGAGTTTAT...GTCCCAGAGAAAGGAACCGTTGGTGCCAGTGGAGACCTTGCCCCACTCTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAACGTCCCTTTCCCAAGTaGACCAGATCCTCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKRPFPK*TRSSVV
Trigger: GACCACGGAGGATCTGGTCAACTTGGGAAAGGGACG...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGAGGATGGCACAGAGCCTaGTTCTCAGAAACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGGWHRA*FSETRA
Trigger: AGCCCTTGTTTCTGAGAACAAGGCTCTGTGCCATCC...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAACTCGATGGCCAGCACTaGCTCCACATGCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKLDGQH*LHMLDD
Trigger: GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAG...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GGCTGCCTCGATGTCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACAACAACAGGCACATACAATaGTGGTTATTCTTCTCACCC +
Preference number: 5 (lower is better)
Translates to: GCLDVRGHEAIFYPGPYNNRHIQ*WLFFSP
Trigger: GGGTGAGAAGAATAACCACAATTGTATGTGCCTGTT...GTTGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATCGAGGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544080.6
CDS-3UTR CAA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCTGGGAGGTGCTGTTCTaGTCCCTGATGGCACCTACC +
Preference number: 5 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVWEVLF*SLMAPT
Trigger: GGTAGGTGCCATCAGGGACAAGAACAGCACCTCCCA...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp CTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTACTTCCACGAACTCGTaGTTCTCTAGGGCCACCTCG +
Preference number: 5 (lower is better)
Translates to: LICYFMTKPIKGPQTPGFTSTNS*FSRATS
Trigger: CGAGGTGGCCCTAGAGAACAACGAGTTCGTGGAAGT...AAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGATCATCTGCGTCCCATaGATGAGTGCCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQEIICVP*MSARPS
Trigger: AGAGGGCCTGGCACTCATCAATGGGACGCAGATGAT...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAAATCATCTGCGTCCCATaGATGAGTGCCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKIICVP*MSARPS
Trigger: AGAGGGCCTGGCACTCATCAATGGGACGCAGATGAT...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTCAGTGTCAAAGGCTTaGGTGGTGCCCTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNSVSKA*VVPFST
Trigger: GGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGA...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp CCATTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTCACTGAGGGAGGGATaGCAGAGCCGCTCGATTCTT +
Preference number: 5 (lower is better)
Translates to: PFLFLILRYSTVGCTLVHSLREG*QSRSIL
Trigger: AAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGA...GTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp GCTGTGGTTTTTAGAGCCACGGTTTCAGACCACTTGAAGGGCCTTGCACATATAGGATGGCACAGAGCCTaGTTCTCAGAAACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: AVVFRATVSDHLKGLAHIGWHRA*FSETRA
Trigger: AGCCCTTGTTTCTGAGAACAAGGCTCTGTGCCATCC...TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGTGGCTCTAAAAACCACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCATTGGAGAAAGAGGTCTaGATTCTGGAATATGCTCCA +
Preference number: 5 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSLEKEV*ILEYAP
Trigger: TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp CATTCACCACACCATGGACCTGTGGACAGCAGCGCAAGGTGTATGCATCCTGGATTGGAGAAAGAGGTCTaGATTCTGGAATATGCTCCA +
Preference number: 5 (lower is better)
Translates to: HSPHHGPVDSSARCMHPGLEKEV*ILEYAP
Trigger: TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA...TCCAGGATGCATACACCTTGCGCTGCTGTCCACAGGTCCATGGTGTGGTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CACTGGGGGTTACTGGCTCAATGGCAGCCCACGGATGACAATGCACAAACCTCATCCTTCAGCCTAGTATaGCTTTGTGCTAAACTGACT +
Preference number: 5 (lower is better)
Translates to: HWGLLAQWQPTDDNAQTSSFSLV*LCAKLT
Trigger: AGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGA...TGAGGTTTGTGCATTGTCATCCGTGGGCTGCCATTGAGCCAGTAACCCCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTAAGCCAAGGAGCCAGCTaGCCTTCTGCTCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLSQGAS*PSAPGA
Trigger: TGCTCCTGGAGCAGAAGGCAAGCTGGCTCCTTGGCT...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp CCATTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACATCAAAGAGGACATCTaGCAGGGGTGGGGAGGCATC +
Preference number: 5 (lower is better)
Translates to: PFLFLILRYSTVGCTLVHIKEDI*QGWGGI
Trigger: GATGCCTCCCCACCCCTGCAAGATGTCCTCTTTGAT...GTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGATAAACTCCTTCTGGTaGAGATGGAATGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEINSFW*RWNEVR
Trigger: CCTGACTTCATTCCATCTCAACCAGAAGGAGTTTAT...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGCGTCCCTTTCCCAAGTaGACCAGATCCTCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVRPFPK*TRSSVV
Trigger: GACCACGGAGGATCTGGTCAACTTGGGAAAGGGACG...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGCGTCCCTTTCCCAAGTaGACCAGATCCTCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: SEKAVGERGLDSGICSILRPFPK*TRSSVV
Trigger: GACCACGGAGGATCTGGTCAACTTGGGAAAGGGACG...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGATTTCTATGACTTGTTaGAGGGTCTCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEISMTC*RVSREM
Trigger: CATTTCCCTGGAGACCCTCAAACAAGTCATAGAAAT...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGAAACATTTCTATGACTaGTTTGAGGGTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLEKHFYD*FEGLQG
Trigger: TCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTT...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTATCATCTGCGTCCCATaGATGAGTGCCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCIICVP*MSARPS
Trigger: AGAGGGCCTGGCACTCATCAATGGGACGCAGATGAT...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TTTCTGTTTCTAATCCTTAGATATTCAACCGTTGGCTGCACCCTGGTGCACTTACTCGATGGCCAGCACTaGCTCCACATGCTCGATGAC +
Preference number: 5 (lower is better)
Translates to: FLFLILRYSTVGCTLVHLLDGQH*LHMLDD
Trigger: GTCATCGAGCATGTGGAGCAAGTGCTGGCCATCGAG...TAAGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAAGGATTAGAAACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp AGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATCTCCAGCGGAGTGGTaGTTTTCAGGGGACGTAGAA +
Preference number: 5 (lower is better)
Translates to: SPLKVLRLRDFGGFLVQKSPAEW*FSGDVE
Trigger: TTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGA...TTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCATCTCCAGCGGAGTGGTaGTTTTCAGGGGACGTAGAA +
Preference number: 5 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLASPAEW*FSGDVE
Trigger: TTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGA...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp AACTGGAGCGAAGAGCACCATGAGACCACTGGGGGTTACTGGCTCAATGGCAGCATTTTGGTGGATTTCTaGTGCAGAAATTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: NWSEEHHETTGGYWLNGSILVDF*CRNCSE
Trigger: TTCACTGCAATTTCTGCACAAGAAATCCACCAAAAT...GCTGCCATTGAGCCAGTAACCCCCAGTGGTCTCATGGTGCTCTTCGCTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp ATCTTTTATCCAGGGCCTTACAACAGAGCGCACCAGGTCATAGACCTTCTCCAGTCAGACTCCGGGATTTaGGTGGATTTCTTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: IFYPGPYNRAHQVIDLLQSDSGI*VDFLCR
Trigger: TCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA...CTGGAGAAGGTCTATGACCTGGTGCGCTCTGTTGTAAGGCCCTGGATAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAATACCTGGTGGGTCTaGAACCACGACAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLNTWWV*NHDNRN
Trigger: GTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCATCCCTTGAAGTTCCCTaGAAGGCGTGTGCTGTCAGT +
Preference number: 5 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLASLEVP*KACAVS
Trigger: ACTGACAGCACACGCCTTCAAGGGAACTTCAAGGGA...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS TCA 90 bp GACTTAGTGGTTTCCCAACACCTGAAGAATGTGAGCGTACTAAGTTaGCCTGAAGCTCCATGCAAGGTAACCCAAGCCTCATCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: DLVVSQHLKNVSVLS*PEAPCKVTQASSSD
Trigger: ATCAGAGGATGAGGCTTGGGTTACCTTGCATGGAGCTTCAGGTCAACTTAGTACGCTCACATTCTTCAGGTGTTGGGAAACCACTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552509.5
CDS-3UTR CAA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCTCAGCTGCTGTCCCTTaGGTTTTTGTAGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVSAAVP*VFVAEQ
Trigger: CTGCTCGGCTACAAAAACCAAAGGGACAGCAGCTGA...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGGAGGTGAAGCCACCATaGTCGGGCTTATTCTTGATA +
Preference number: 5 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKEVKPP*SGLFLI
Trigger: TATCAAGAATAAGCCCGACAATGGTGGCTTCACCTC...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTACTTCCACGAACTCGTaGTTCTCTAGGGCCACCTCG +
Preference number: 5 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCTSTNS*FSRATS
Trigger: CGAGGTGGCCCTAGAGAACAACGAGTTCGTGGAAGT...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTACGTCCCTTTCCCAAGTaGACCAGATCCTCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVRPFPK*TRSSVV
Trigger: GACCACGGAGGATCTGGTCAACTTGGGAAAGGGACG...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GGATTGCAGAGCCGCTCGATTCTTCTCTCACTGATTGCAGCAAGTTCATGGATGCCTTTGGCTAAGACATaGATCCTTAAAGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: GLQSRSILLSLIAASSWMPLAKT*ILKAKS
Trigger: GCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGG...CATCCATGAACTTGCTGCAATCAGTGAGAGAAGAATCGAGCGGCTCTGCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAAAAGCAACTTCAATTaGCCCACGGTGAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLKSNFN*PTVRSK
Trigger: CTTCGACCTCACCGTGGGCAAATTGAAGTTGCTTTT...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp CCTCTCATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGAACTGTCTCTCCCCTATaGGCAAAGACCATAGGATTA +
Preference number: 5 (lower is better)
Translates to: PLICYFMTKPIKGPQTPGTVSPL*AKTIGL
Trigger: TAATCCTATGGTCTTTGCCAATAGGGGAGAGACAGT...TCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGATGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATCACTGAGGGAGGGATaGCAGAGCCGCTCGATTCTT +
Preference number: 5 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPSLREG*QSRSIL
Trigger: AAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGA...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGGGATGGCACAGAGCCTaGTTCTCAGAAACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LKVLRLRDFGGFLVQKLQGWHRA*FSETRA
Trigger: AGCCCTTGTTTCTGAGAACAAGGCTCTGTGCCATCC...CTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGAATACCTGGTGGGTCTaGAACCACGACAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWNTWWV*NHDNRN
Trigger: GTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS CCA 90 bp CTCGATGTACTTTTCAGGCTCCCGGTACTTGAGATAAACTCCTTCTaGTTGAGATGGAATGAAGTCAGGAGACATGGCATCACCCTCTAT +
Preference number: 5 (lower is better)
Translates to: LDVLFRLPVLEINSF*LRWNEVRRHGITLY
Trigger: ATAGAGGGTGATGCCATGTCTCCTGACTTCATTCCATCTCAACCAGAAGGAGTTTATCTCAAGTACCGGGAGCCTGAAAAGTACATCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546579.1
CDS-3UTR CAA 90 bp ATCTGCTACTTCATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGGAGGTGAAGCCACCATaGTCGGGCTTATTCTTGATA +
Preference number: 5 (lower is better)
Translates to: ICYFMTKPIKGPQTPGFWEVKPP*SGLFLI
Trigger: TATCAAGAATAAGCCCGACAATGGTGGCTTCACCTC...CCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCATGAAGTAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCCGTCCCTTTCCCAAGTaGACCAGATCCTCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: DSGICSILYFSMYGAATSRPFPK*TRSSVV
Trigger: GACCACGGAGGATCTGGTCAACTTGGGAAAGGGACG...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GCATTAAACATTTCTATGACTTGTTTGAGGGTCTCCAGGGAAATGCCACTGTATTCAGTGTCAAAGGCTTaGGTGGTGCCCTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: ALNISMTCLRVSREMPLYSVSKA*VVPFST
Trigger: GGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGA...ATACAGTGGCATTTCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTTAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAGAAAAGCAACTTCAATTaGCCCACGGTGAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: PGFWWISCAEIAVKRLLEKSNFN*PTVRSK
Trigger: CTTCGACCTCACCGTGGGCAAATTGAAGTTGCTTTT...CTCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGGCAAGGTGGCAAGTGTGTCTGTCCTCCTCTCCACCAGCTGTGGTTTTTAGAGTCTTCACAAATGCTATaGTATCATTCACCACACCAT +
Preference number: 5 (lower is better)
Translates to: RQGGKCVCPPLHQLWFLESSQML*YHSPHH
Trigger: ATGGTGTGGTGAATGATACAATAGCATTTGTGAAGA...CTCTAAAAACCACAGCTGGTGGAGAGGAGGACAGACACACTTGCCACCTTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTCACTGAGGGAGGGATaGCAGAGCCGCTCGATTCTT +
Preference number: 5 (lower is better)
Translates to: EKAVGERGLDSGICSILYSLREG*QSRSIL
Trigger: AAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGA...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTCTCCAGCGGAGTGGTaGTTTTCAGGGGACGTAGAA +
Preference number: 5 (lower is better)
Translates to: SEKAVGERGLDSGICSILSPAEW*FSGDVE
Trigger: TTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGA...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATCTCCAGCGGAGTGGTaGTTTTCAGGGGACGTAGAA +
Preference number: 5 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPSPAEW*FSGDVE
Trigger: TTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGA...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGTCAGACTCCGGGATTTaGGTGGATTTCTTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQESDSGI*VDFLCR
Trigger: TCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATTTAGCATCAGACTCCGGGATTTaGGTGGATTTCTTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: NTWWVLNHDNRNTVLNLASDSGI*VDFLCR
Trigger: TCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA...TGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp AAAGCCAAGAGCATCCGACACCTCTCAGGACTTAGTGGTTTCCCAACACCTGAATCCTTCAGCCTAGTATaGCTTTGTGCTAAACTGACT +
Preference number: 5 (lower is better)
Translates to: KAKSIRHLSGLSGFPTPESFSLV*LCAKLT
Trigger: AGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGA...TTCAGGTGTTGGGAAACCACTAAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATCTCCCATGTAAGCATTaGGGGGATACGTGTAGTGAT +
Preference number: 5 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNLPCKH*GDTCSD
Trigger: ATCACTACACGTATCCCCCAAATGCTTACATGGGAG...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGACGGTTTCAGACCACTaGAAGGGCCTTGCACATATA +
Preference number: 5 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQETVSDH*KGLAHI
Trigger: TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGT...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGAAACATTTCTATGACTaGTTTGAGGGTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKKHFYD*FEGLQG
Trigger: TCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTT...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAAAAAGCAACTTCAATTaGCCCACGGTGAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGKSNFN*PTVRSK
Trigger: CTTCGACCTCACCGTGGGCAAATTGAAGTTGCTTTT...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATACTGTCTCTCCCCTATaGGCAAAGACCATAGGATTA +
Preference number: 5 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNTVSPL*AKTIGL
Trigger: TAATCCTATGGTCTTTGCCAATAGGGGAGAGACAGT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCGGATGGCACAGAGCCTaGTTCTCAGAAACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSGWHRA*FSETRA
Trigger: AGCCCTTGTTTCTGAGAACAAGGCTCTGTGCCATCC...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTTCTCCAGCGGAGTGGTaGTTTTCAGGGGACGTAGAA +
Preference number: 5 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFSPAEW*FSGDVE
Trigger: TTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGA...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp TTGCTCATTCCCAAGGAATGGCCAGAAAACAATAGAATAAGGCAATGTTTCTCCTCTCCAGCGGAGTGGTaGTTTTCAGGGGACGTAGAA +
Preference number: 5 (lower is better)
Translates to: LLIPKEWPENNRIRQCFSSPAEW*FSGDVE
Trigger: TTCTACGTCCCCTGAAAACAACCACTCCGCTGGAGA...GGAGAAACATTGCCTTATTCTATTGTTTTCTGGCCATTCCTTGGGAATGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp CTTGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTATTGGAGAAAGAGGTCTaGATTCTGGAATATGCTCCA +
Preference number: 5 (lower is better)
Translates to: LGKPRGHVTHPSSGQIHLLEKEV*ILEYAP
Trigger: TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA...TAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTACTTCCACGAACTCGTaGTTCTCTAGGGCCACCTCG +
Preference number: 5 (lower is better)
Translates to: MITITERRLVNPQRFLICTSTNS*FSRATS
Trigger: CGAGGTGGCCCTAGAGAACAACGAGTTCGTGGAAGT...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGAGCTCCTGTAGCTTATaGATAGGAATTACAGTTCTG +
Preference number: 5 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKSSCSL*IGITVL
Trigger: CAGAACTGTAATTCCTATCAATAAGCTACAGGAGCT...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261208.8
CDS-3UTR CAA 90 bp TCAGACTCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTCCTTTGGCTAAGACATaGATCCTTAAAGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: SDSGILVDFLCRNCSEKAPLAKT*ILKAKS
Trigger: GCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGG...AGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATATATGCACACACTGGTGCAAAGTCACAGAGCTTAGACTTGGGAAGCCAAGAGATTTCTATGACTTGTTaGAGGGTCTCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: IYAHTGAKSQSLDLGSQEISMTC*RVSREM
Trigger: CATTTCCCTGGAGACCCTCAAACAAGTCATAGAAAT...CTCTTGGCTTCCCAAGTCTAAGCTCTGTGACTTTGCACCAGTGTGTGCATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCATCAGTGTCAAAGGCTTaGGTGGTGCCCTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: RGLDSGICSILYFSMYGASVSKA*VVPFST
Trigger: GGTGCTGAAGGGCACCACCAAAGCCTTTGACACTGA...TGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AAAGCCAAGAGCATCCGACACCTCTCAGGACTTAGTGGTTTCCCAACACCTGAATCTTCACAAATGCTATaGTATCATTCACCACACCAT +
Preference number: 5 (lower is better)
Translates to: KAKSIRHLSGLSGFPTPESSQML*YHSPHH
Trigger: ATGGTGTGGTGAATGATACAATAGCATTTGTGAAGA...TTCAGGTGTTGGGAAACCACTAAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCACTGTCTCTCCCCTATaGGCAAAGACCATAGGATTA +
Preference number: 5 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISTVSPL*AKTIGL
Trigger: TAATCCTATGGTCTTTGCCAATAGGGGAGAGACAGT...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTTCACTGAGGGAGGGATaGCAGAGCCGCTCGATTCTT +
Preference number: 5 (lower is better)
Translates to: MITITERRLVNPQRFLICSLREG*QSRSIL
Trigger: AAGAATCGAGCGGCTCTGCAATCCCTCCCTCAGTGA...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATAACAGGCACATACAATaGTGGTTATTCTTCTCACCC +
Preference number: 5 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNNRHIQ*WLFFSP
Trigger: GGGTGAGAAGAATAACCACAATTGTATGTGCCTGTT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGCTCCCATGTAAGCATTaGGGGGATACGTGTAGTGAT +
Preference number: 5 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVLPCKH*GDTCSD
Trigger: ATCACTACACGTATCCCCCAAATGCTTACATGGGAG...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATGTGTGTGTTCACATTTaGACAAGGAATAGCACCAAG +
Preference number: 5 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNVCVHI*TRNSTK
Trigger: CTTGGTGCTATTCCTTGTCAAAATGTGAACACACAC...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTTGCTCATTCTTAGATATTCAACCGTaGGCTGCACCCTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: YGFLVVLQVVAQIPFCSFLDIQP*AAPWCT
Trigger: AGTGCACCAGGGTGCAGCCAACGGTTGAATATCTAA...GAATGAGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTATAAACTCCTTCTGGTaGAGATGGAATGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCINSFW*RWNEVR
Trigger: CCTGACTTCATTCCATCTCAACCAGAAGGAGTTTAT...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAATTTCTATGACTTGTTaGAGGGTCTCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGISMTC*RVSREM
Trigger: CATTTCCCTGGAGACCCTCAAACAAGTCATAGAAAT...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TCCGGGATTTTGGTGGATTTCTTGTGCAGAAATTGCAGTGAAAAGGCTGTTGGAAAACATTTCTATGACTaGTTTGAGGGTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: SGILVDFLCRNCSEKAVGKHFYD*FEGLQG
Trigger: TCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTT...TCCAACAGCCTTTTCACTGCAATTTCTGCACAAGAAATCCACCAAAATCCCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTAAAAGCAACTTCAATTaGCCCACGGTGAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFKSNFN*PTVRSK
Trigger: CTTCGACCTCACCGTGGGCAAATTGAAGTTGCTTTT...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp TGGGAAGCCAAGAGGTCATGTGACCCATCCTTCATCTGGACAGATACACTTAAGATTTTGGTGGATTTCTaGTGCAGAAATTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: WEAKRSCDPSFIWTDTLKILVDF*CRNCSE
Trigger: TTCACTGCAATTTCTGCACAAGAAATCCACCAAAAT...CTTAAGTGTATCTGTCCAGATGAAGGATGGGTCACATGACCTCTTGGCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTTCAGACTCCGGGATTTaGGTGGATTTCTTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFSDSGI*VDFLCR
Trigger: TCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCTCCTTCAGCCTAGTATaGCTTTGTGCTAAACTGACT +
Preference number: 5 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISSFSLV*LCAKLT
Trigger: AGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGA...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp TCTGAAAATACCTGGTGGGTCTTGAACCACGACAACAGGAACACAGTGCTGAATATTACAGAAAGGAGGTaGGTTAATCCCCAAAGATTC +
Preference number: 5 (lower is better)
Translates to: SENTWWVLNHDNRNTVLNITERR*VNPQRF
Trigger: GAATCTTTGGGGATTAACCAACCTCCTTTCTGTAAT...ATTCAGCACTGTGTTCCTGTTGTCGTGGTTCAAGACCCACCAGGTATTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GAAGTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAACGGTTTCAGACCACTaGAAGGGCCTTGCACATATA +
Preference number: 5 (lower is better)
Translates to: EVKILTSNSHVSIWGIRVTVSDH*KGLAHI
Trigger: TATATGTGCAAGGCCCTTCAAGTGGTCTGAAACCGT...TACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTTCCCTTGAAGTTCCCTaGAAGGCGTGTGCTGTCAGT +
Preference number: 5 (lower is better)
Translates to: MITITERRLVNPQRFLICSLEVP*KACAVS
Trigger: ACTGACAGCACACGCCTTCAAGGGAACTTCAAGGGA...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS TCA 90 bp ACATGCTTGAATTTGCTGTTTAGAAAGGTCAGGGTGATTGCTGTATaGGGGTGGTCGGAGGAAAACGCTGTCCATAGTGAAATAATCAAA +
Preference number: 5 (lower is better)
Translates to: TCLNLLFRKVRVIAV*GWSEENAVHSEIIK
Trigger: TTTGATTATTTCACTATGGACAGCGTTTTCCTCCGACCACCCTCATACAGCAATCACCCTGACCTTTCTAAACAGCAAATTCAAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551562.1
CDS-3UTR CAA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGATAAACTCCTTCTGGTaGAGATGGAATGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVINSFW*RWNEVR
Trigger: CCTGACTTCATTCCATCTCAACCAGAAGGAGTTTAT...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCAATAAACTCCTTCTGGTaGAGATGGAATGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPINSFW*RWNEVR
Trigger: CCTGACTTCATTCCATCTCAACCAGAAGGAGTTTAT...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATACTGTCTCTCCCCTATaGGCAAAGACCATAGGATTA +
Preference number: 5 (lower is better)
Translates to: EKAVGERGLDSGICSILYTVSPL*AKTIGL
Trigger: TAATCCTATGGTCTTTGCCAATAGGGGAGAGACAGT...ATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTGGAGAAAGAGGTCTaGATTCTGGAATATGCTCCA +
Preference number: 5 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPLEKEV*ILEYAP
Trigger: TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CTCTCCCCTATTGGCAAAGACCATAGGATTATCTGTTGCGCTGTTCAGTTCTGTATTTTGGTGGATTTCTaGTGCAGAAATTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LSPIGKDHRIICCAVQFCILVDF*CRNCSE
Trigger: TTCACTGCAATTTCTGCACAAGAAATCCACCAAAAT...ACAGAACTGAACAGCGCAACAGATAATCCTATGGTCTTTGCCAATAGGGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTTCCTTCAGCCTAGTATaGCTTTGTGCTAAACTGACT +
Preference number: 5 (lower is better)
Translates to: VKRLLEKEVLILEYAPFCSFSLV*LCAKLT
Trigger: AGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGA...ACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp GTGAAAATACTAACCTCAAACTCCCATGTAAGCATTTGGGGGATACGTGTAGTGAACAGGCACATACAATaGTGGTTATTCTTCTCACCC +
Preference number: 5 (lower is better)
Translates to: VKILTSNSHVSIWGIRVVNRHIQ*WLFFSP
Trigger: GGGTGAGAAGAATAACCACAATTGTATGTGCCTGTT...CACTACACGTATCCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGACTTAGTTTATTCCATGTTTCCCTTGAAGTTCCCTTGAAGGCGTGTGCTGTCATTACAGAAAGGAGGTaGGTTAATCCCCAAAGATTC +
Preference number: 5 (lower is better)
Translates to: RLSLFHVSLEVPLKACAVITERR*VNPQRF
Trigger: GAATCTTTGGGGATTAACCAACCTCCTTTCTGTAAT...GACAGCACACGCCTTCAAGGGAACTTCAAGGGAAACATGGAATAAACTAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTGAGGTGAAGCCACCATaGTCGGGCTTATTCTTGATA +
Preference number: 5 (lower is better)
Translates to: MITITERRLVNPQRFLICEVKPP*SGLFLI
Trigger: TATCAAGAATAAGCCCGACAATGGTGGCTTCACCTC...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGAGCTCCTGTAGCTTATaGATAGGAATTACAGTTCTG +
Preference number: 5 (lower is better)
Translates to: SEKAVGERGLDSGICSILSSCSL*IGITVL
Trigger: CAGAACTGTAATTCCTATCAATAAGCTACAGGAGCT...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538703.5
CDS-3UTR CAA 90 bp GCATTAAACATTTCTATGACTTGTTTGAGGGTCTCCAGGGAAATGCCACTGTATAAACATTTCTATGACTaGTTTGAGGGTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: ALNISMTCLRVSREMPLYKHFYD*FEGLQG
Trigger: TCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTT...ATACAGTGGCATTTCCCTGGAGACCCTCAAACAAGTCATAGAAATGTTTAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp CCACGACAACAGGAACACAGTGCTGAATTTAGCAACTATAATACTGCCATCAGCTCTTCACAAATGCTATaGTATCATTCACCACACCAT +
Preference number: 5 (lower is better)
Translates to: PRQQEHSAEFSNYNTAISSSQML*YHSPHH
Trigger: ATGGTGTGGTGAATGATACAATAGCATTTGTGAAGA...GCTGATGGCAGTATTATAGTTGCTAAATTCAGCACTGTGTTCCTGTTGTCGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp ATGACAAAGCCCATTAAAGGTCCTCAGACTCCGGGATTTTGGTGGATTTCTTGTATTTTGGTGGATTTCTaGTGCAGAAATTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: MTKPIKGPQTPGFWWISCILVDF*CRNCSE
Trigger: TTCACTGCAATTTCTGCACAAGAAATCCACCAAAAT...ACAAGAAATCCACCAAAATCCCGGAGTCTGAGGACCTTTAATGGGCTTTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCATCAGACTCCGGGATTTaGGTGGATTTCTTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: RGLDSGICSILYFSMYGASDSGI*VDFLCR
Trigger: TCTGCACAAGAAATCCACCAAAATCCCGGAGTCTGA...TGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGAGAGTGAGTGGCCTGTaGAAACTGTTAAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: SEKAVGERGLDSGICSILRVSGL*KLLRKK
Trigger: TTTCTTTCTTAACAGTTTCAACAGGCCACTCACTCT...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS-3UTR CAA 90 bp ATTGCAGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCAAGAGTGAGTGGCCTGTaGAAACTGTTAAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: IAVKRLLEKEVLILEYAPRVSGL*KLLRKK
Trigger: TTTCTTTCTTAACAGTTTCAACAGGCCACTCACTCT...TGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538703.5
ENST00000544080.6
CDS-3UTR CAA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTAACAGGCACATACAATaGTGGTTATTCTTCTCACCC +
Preference number: 5 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFNRHIQ*WLFFSP
Trigger: GGGTGAGAAGAATAACCACAATTGTATGTGCCTGTT...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp CTCTATTGTGAAATCCACTGTTCGGCCCATTTTAGATGGCAATTAGGTAGGCAACATTCCTTATCTCCTTaGCACATGAAACTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: LYCEIHCSAHFRWQLGRQHSLSP*HMKLLV
Trigger: AACAAGGAGTTTCATGTGCAAAGGAGATAAGGAATG...TTGCCTACCTAATTGCCATCTAAAATGGGCCGAACAGTGGATTTCACAATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp TATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTTGCTCATTCTGGTGCTGCAAGTTGTaGCTCAAATACCTTTTTGCT +
Preference number: 5 (lower is better)
Translates to: YGFLVVLQVVAQIPFCSFWCCKL*LKYLFA
Trigger: AGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCA...GAATGAGCAAAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp GAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGAGGTGAAGCCACCATaGTCGGGCTTATTCTTGATA +
Preference number: 5 (lower is better)
Translates to: ERGLDSGICSILYFSMYGEVKPP*SGLFLI
Trigger: TATCAAGAATAAGCCCGACAATGGTGGCTTCACCTC...TCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp TTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTGAGGTGAAGCCACCATaGTCGGGCTTATTCTTGATA +
Preference number: 5 (lower is better)
Translates to: LEKEVLILEYAPFCIFQCEVKPP*SGLFLI
Trigger: TATCAAGAATAAGCCCGACAATGGTGGCTTCACCTC...ACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp ATGATTACCATTACAGAAAGGAGGTTGGTTAATCCCCAAAGATTCCTTATCTGTCCTTTGGCTAAGACATaGATCCTTAAAGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: MITITERRLVNPQRFLICPLAKT*ILKAKS
Trigger: GCTCTTGGCTTTAAGGATCAATGTCTTAGCCAAAGG...ACAGATAAGGAATCTTTGGGGATTAACCAACCTCCTTTCTGTAATGGTAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp GATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCAGCTACTTCCATTTCTATGACTTGTTaGAGGGTCTCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: DSGICSILYFSMYGAATSISMTC*RVSREM
Trigger: CATTTCCCTGGAGACCCTCAAACAAGTCATAGAAAT...GGAAGTAGCTGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGTGAAAAGGCTGTTGGAGAAAGAGGTCTTGATTCTGGAATATGCTCCATTCTGATTTTGGTGGATTTCTaGTGCAGAAATTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: SEKAVGERGLDSGICSILILVDF*CRNCSE
Trigger: TTCACTGCAATTTCTGCACAAGAAATCCACCAAAAT...CAGAATGGAGCATATTCCAGAATCAAGACCTCTTTCTCCAACAGCCTTTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS-3UTR CAA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTAGAGTGAGTGGCCTGTaGAAACTGTTAAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFRVSGL*KLLRKK
Trigger: TTTCTTTCTTAACAGTTTCAACAGGCCACTCACTCT...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTCATTCCTTATCTCCTTaGCACATGAAACTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFHSLSP*HMKLLV
Trigger: AACAAGGAGTTTCATGTGCAAAGGAGATAAGGAATG...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261208.8
ENST00000541929.5
CDS-3UTR CAA 90 bp AGTGCTGAATTTAGCAACTATAATACTGCCATCAGCCTAACCAACGTAGGCTTTTCTTCACAAATGCTATaGTATCATTCACCACACCAT +
Preference number: 5 (lower is better)
Translates to: SAEFSNYNTAISLTNVGFSSQML*YHSPHH
Trigger: ATGGTGTGGTGAATGATACAATAGCATTTGTGAAGA...AAAGCCTACGTTGGTTAGGCTGATGGCAGTATTATAGTTGCTAAATTCAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
CDS-3UTR CAA 90 bp TGTTTATTATATGGCTTCTTAGTGGTGCTGCAAGTTGTTGCTCAAATACCTTTTTGCTCAAATACCTTTTaGCTCATTCCCAAGGAATGG +
Preference number: 5 (lower is better)
Translates to: CLLYGFLVVLQVVAQIPFCSNTF*LIPKEW
Trigger: CCATTCCTTGGGAATGAGCAAAAAGGTATTTGAGCA...AAAAGGTATTTGAGCAACAACTTGCAGCACCACTAAGAAGCCATATAATAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548808.1
CDS-3UTR CAA 90 bp AGAGGTCTTGATTCTGGAATATGCTCCATTCTGTATTTTTCAATGTATGGAGCATCTTCACAAATGCTATaGTATCATTCACCACACCAT +
Preference number: 5 (lower is better)
Translates to: RGLDSGICSILYFSMYGASSQML*YHSPHH
Trigger: ATGGTGTGGTGAATGATACAATAGCATTTGTGAAGA...TGCTCCATACATTGAAAAATACAGAATGGAGCATATTCCAGAATCAAGACCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538703.5
ENST00000544080.6
ENST00000546999.5
CDS GCA 72 bp CTCACGGCCTCCCGGCCCAGCCAGCCCACAGTGAGCTaGGCGTCCTGGCAGGGCACTGCCAGCCATTCCCCA +
Preference number: 6 (lower is better)
Translates to: LTASRPSQPTVS*ASWQGTASHSP
Trigger: TGGGGAATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGGGCCGGGAGGCCGTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS CCA 72 bp TCCCGGCCCAGCCAGCCCACAGTGAGCTGCGCGTCCTaGCAGGGCACTGCCAGCCATTCCCCACGTACGTGC +
Preference number: 6 (lower is better)
Translates to: SRPSQPTVSCAS*QGTASHSPRTC
Trigger: GCACGTACGTGGGGAATGGCTGGCAGTGCCCTGCCAGGACGCGCAGCTCACTGTGGGCTGGCTGGGCCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS GCA 72 bp CGAGCCGGTCCTCGTTGTCCAGCAGGCCCAGGCCCTTaGACCGGCGCACAAGGAAGTGCGCGTCATCCACGG +
Preference number: 6 (lower is better)
Translates to: RAGPRCPAGPGP*TGAQGSARHPR
Trigger: CCGTGGATGACGCGCACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCTGGACAACGAGGACCGGCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS GCA 72 bp TCCTGGCAGGGCACTGCCAGCCATTCCCCACGTACGTaGACCGTGTATCTGGGCATGGCTCCGCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: SWQGTASHSPRT*TVYLGMAPLQP
Trigger: AGGCTGCAGCGGAGCCATGCCCAGATACACGGTGCACGTACGTGGGGAATGGCTGGCAGTGCCCTGCCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS GCA 72 bp AGCAGGCCCAGGCCCTTGCACCGGCGCACAAGGAAGTaGGCGTCATCCACGGAGGTGAAGCCACCATTGTCG +
Preference number: 6 (lower is better)
Translates to: SRPRPLHRRTRK*ASSTEVKPPLS
Trigger: CGACAATGGTGGCTTCACCTCCGTGGATGACGCGCACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS CAA 90 bp TCCACGAACTCGTTGTTCTCTAGGGCCACCTCGAGCCGGTCCTCGTaGTCCAGCAGGCCCAGGCCCTTGCACCGGCGCACAAGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: STNSLFSRATSSRSS*SSRPRPLHRRTRKC
Trigger: GCACTTCCTTGTGCGCCGGTGCAAGGGCCTGGGCCTGCTGGACAACGAGGACCGGCTCGAGGTGGCCCTAGAGAACAACGAGTTCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS GCA 72 bp CACGTACGTGCACCGTGTATCTGGGCATGGCTCCGCTaGAGCCTGAGGTCCTCAGCTGGTCACAGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: HVRAPCIWAWLR*SLRSSAGHRRG
Trigger: TCCCCTCCTGTGACCAGCTGAGGACCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGGTGCACGTACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS CCA 72 bp GCCATTCCCCACGTACGTGCACCGTGTATCTGGGCATaGCTCCGCTGCAGCCTGAGGTCCTCAGCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: AIPHVRAPCIWA*LRCSLRSSAGH
Trigger: GTGACCAGCTGAGGACCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGGTGCACGTACGTGGGGAATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS CCA 72 bp CTGCCAGCCATTCCCCACGTACGTGCACCGTGTATCTaGGCATGGCTCCGCTGCAGCCTGAGGTCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: LPAIPHVRAPCI*AWLRCSLRSSA
Trigger: AGCTGAGGACCTCAGGCTGCAGCGGAGCCATGCCCAGATACACGGTGCACGTACGTGGGGAATGGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS CCA 72 bp GTCCACTTTCCATCCAGACCTGCTGCCAGAAAGGCCTaGGGTCTCCCACCCTGGGAGGTGCTGTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: VHFPSRPAARKA*GLPPWEVLFLS
Trigger: GGACAAGAACAGCACCTCCCAGGGTGGGAGACCCCAGGCCTTTCTGGCAGCAGGTCTGGATGGAAAGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
CDS CAA 72 bp ATGGCATCACCCTCTATAACCACTTCCACGAACTCGTaGTTCTCTAGGGCCACCTCGAGCCGGTCCTCGTTG +
Preference number: 6 (lower is better)
Translates to: MASPSITTSTNS*FSRATSSRSSL
Trigger: CAACGAGGACCGGCTCGAGGTGGCCCTAGAGAACAACGAGTTCGTGGAAGTGGTTATAGAGGGTGATGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546999.5
ENST00000552509.5
CDS GCA 72 bp GGTGTCCAACCTGGGGCAATTGCTGCAGATAGAAGCTaGTACGAGTCTTACGTATTTAGCATCAGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GVQPGAIAADRS*YESYVFSISPA
Trigger: GGCTGGGCTGATGCTAAATACGTAAGACTCGTAGCAGCTTCTATCTGCAGCAATTGCCCCAGGTTGGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549376.1
CDS TCA 72 bp CCAACACCTGAAGAATGTGAGCGTACTAAGTTGACCTaGAGCTCCATGCAAGGTAACCCAAGCCTCATCCTC +
Preference number: 6 (lower is better)
Translates to: PTPEECERTKLT*SSMQGNPSLIL
Trigger: GAGGATGAGGCTTGGGTTACCTTGCATGGAGCTTCAGGTCAACTTAGTACGCTCACATTCTTCAGGTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552509.5
CDS GCA 72 bp GACTTGGAACCTGAGAGTAAGTTCACAGGTCACCTCTaGCACTTACCAGCTCTGACCTGGAGAAAGTCAGTT +
Preference number: 6 (lower is better)
Translates to: DLEPESKFTGHL*HLPALTWRKSV
Trigger: AACTGACTTTCTCCAGGTCAGAGCTGGTAAGTGGCAGAGGTGACCTGTGAACTTACTCTCAGGTTCCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548636.1
CDS CAA 90 bp GTGATACGAAGCATGCAAGCACAGTTGGTGTCCAACCTGGGGCAATaGCTGCAGATAGAAGCTGCTACGAGTCTTACGTATTTAGCATCA +
Preference number: 6 (lower is better)
Translates to: VIRSMQAQLVSNLGQ*LQIEAATSLTYLAS
Trigger: TGATGCTAAATACGTAAGACTCGTAGCAGCTTCTATCTGCAGCAATTGCCCCAGGTTGGACACCAACTGTGCTTGCATGCTTCGTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549376.1
CDS CCA 72 bp CTTTTCAGGCTCCCGGTACTTGAGATAAACTCCTTCTaGTTGAGATGGAATGAAGTCAGGAGACATGGCATC +
Preference number: 6 (lower is better)
Translates to: LFRLPVLEINSF*LRWNEVRRHGI
Trigger: GATGCCATGTCTCCTGACTTCATTCCATCTCAACCAGAAGGAGTTTATCTCAAGTACCGGGAGCCTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546579.1
CDS CAA 90 bp GATGTACTTTTCAGGCTCCCGGTACTTGAGATAAACTCCTTCTGGTaGAGATGGAATGAAGTCAGGAGACATGGCATCACCCTCTATAAC +
Preference number: 6 (lower is better)
Translates to: DVLFRLPVLEINSFW*RWNEVRRHGITLYN
Trigger: GTTATAGAGGGTGATGCCATGTCTCCTGACTTCATTCCATCTCAACCAGAAGGAGTTTATCTCAAGTACCGGGAGCCTGAAAAGTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546579.1
CDS TCA 72 bp AATTTGCTGTTTAGAAAGGTCAGGGTGATTGCTGTATaGGGGTGGTCGGAGGAAAACGCTGTCCATAGTGAA +
Preference number: 6 (lower is better)
Translates to: NLLFRKVRVIAV*GWSEENAVHSE
Trigger: TTCACTATGGACAGCGTTTTCCTCCGACCACCCTCATACAGCAATCACCCTGACCTTTCTAAACAGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551562.1
CDS CAA 72 bp CTAAAACAATGCACGGGAGACTCGTTACAGATCACATaGTACAGCCATGTTCCCCCTGTTAAACCAAGGAAC +
Preference number: 6 (lower is better)
Translates to: LKQCTGDSLQIT*YSHVPPVKPRN
Trigger: GTTCCTTGGTTTAACAGGGGGAACATGGCTGTACAATGTGATCTGTAACGAGTCTCCCGTGCATTGTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546579.1
CDS CAA 90 bp TTGTACAGCCATGTTCCCCCTGTTAAACCAAGGAACGGCCCATCATaGGCCCATGAATTCTATAGAAATGGCTGCTTTAAAACTGCTTCA +
Preference number: 6 (lower is better)
Translates to: LYSHVPPVKPRNGPS*AHEFYRNGCFKTAS
Trigger: TGAAGCAGTTTTAAAGCAGCCATTTCTATAGAATTCATGGGCCAATGATGGGCCGTTCCTTGGTTTAACAGGGGGAACATGGCTGTACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546579.1
CDS GCA 72 bp TCTTTTATGATGCTATCTATGACCTCCCTGGATTTCTaGACCCTCTTCTCAGCTGTTGGGGTGAGCTTTATT +
Preference number: 6 (lower is better)
Translates to: SFMMLSMTSLDF*TLFSAVGVSFI
Trigger: AATAAAGCTCACCCCAACAGCTGAGAAGAGGGTGCAGAAATCCAGGGAGGTCATAGATAGCATCATAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261208.8
ENST00000538703.5
ENST00000541929.5
ENST00000544080.6
ENST00000546579.1
ENST00000546999.5
ENST00000552509.5
CDS CAA 72 bp CATGTTCCCCCTGTTAAACCAAGGAACGGCCCATCATaGGCCCATGAATTCTATAGAAATGGCTGCTTTAAA +
Preference number: 6 (lower is better)
Translates to: HVPPVKPRNGPS*AHEFYRNGCFK
Trigger: TTTAAAGCAGCCATTTCTATAGAATTCATGGGCCAATGATGGGCCGTTCCTTGGTTTAACAGGGGGAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546579.1
CDS GCA 72 bp GGCCCATCATTGGCCCATGAATTCTATAGAAATGGCTaGTTTAAAACTGCTTCAGATGGTTTCATGTGGTCT +
Preference number: 6 (lower is better)
Translates to: GPSLAHEFYRNG*FKTASDGFMWS
Trigger: AGACCACATGAAACCATCTGAAGCAGTTTTAAAGCAGCCATTTCTATAGAATTCATGGGCCAATGATGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546579.1
CDS CCA 72 bp ATGTTCCCCCTGTTAAACCAAGGAACGGCCCATCATTaGCCCATGAATTCTATAGAAATGGCTGCTTTAAAA +
Preference number: 6 (lower is better)
Translates to: MFPLLNQGTAHH*PMNSIEMAALK
Trigger: TTTTAAAGCAGCCATTTCTATAGAATTCATGGGCCAATGATGGGCCGTTCCTTGGTTTAACAGGGGGAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546579.1
CDS TCA 72 bp CTGATTCATTTACTCTGTGAAATGGAGCAATGGAACTaGGAAGCTACACAAAATGATTGTTTCAGTAGATCC +
Preference number: 6 (lower is better)
Translates to: LIHLLCEMEQWN*EATQNDCFSRS
Trigger: GGATCTACTGAAACAATCATTTTGTGTAGCTTCTCAGTTCCATTGCTCCATTTCACAGAGTAAATGAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548636.1