Pregenerated sensors for HADHB (Homo sapiens)
Ensembl gene IDs: ENSG00000138029Ensembl transcript IDs: ENST00000425035.5, ENST00000479347.1, ENST00000494615.1, ENST00000537713.5, ENST00000545822.2
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AAGGCACTGCGCCTGGCCTCATTTTTAAACTCGCTAACTTTGAGGTaGCAGAGAGACAACCAGGTGGATATGTTAATTCCACAGTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: KALRLASFLNSLTLR*QRDNQVDMLIPQLA Trigger: AGCTAACTGTGGAATTAACATATCCACCTGGTTGTCTCTCTGTCACCTCAAAGTTAGCGAGTTTAAAAATGAGGCCAGGCGCAGTGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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| CDS CCA 90 bp | CCAACCAGAAACCAGTGTCATCTACCTACAAGTGATCAACTGTGTTaGTCAGATTCTCTCTCTAGGCAAAGAAGCATGGAAAGAAATGCC | + |
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Preference number: 5 (lower is better) Translates to: PTRNQCHLPTSDQLC*SDSLSRQRSMERNA Trigger: GGCATTTCTTTCCATGCTTCTTTGCCTAGAGAGAGAATCTGACCAACACAGTTGATCACTTGTAGGTAGATGACACTGGTTTCTGGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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| CDS TCA 90 bp | CCTACAATGAGAAGGCTGAGGGAATATGTGAGACAAACAGTAACTTaGGAGGTAGTAGGAGAATCAAGAGAGAACAGTACACAAGATCAA | + |
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Preference number: 5 (lower is better) Translates to: PTMRRLREYVRQTVT*EVVGESRENSTQDQ Trigger: TTGATCTTGTGTACTGTTCTCTCTTGATTCTCCTACTACCTCTCAAGTTACTGTTTGTCTCACATATTCCCTCAGCCTTCTCATTGTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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| CDS CCA 90 bp | CTAGTTCCTAATCACTTCTATTTCAGGAATGGGCCCTCTTGCACATaGGAGAAGAAGATATTCATCAATAGAGAAGCATTTCACAAATTG | + |
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Preference number: 5 (lower is better) Translates to: LVPNHFYFRNGPSCT*EKKIFINREAFHKL Trigger: CAATTTGTGAAATGCTTCTCTATTGATGAATATCTTCTTCTCCCATGTGCAAGAGGGCCCATTCCTGAAATAGAAGTGATTAGGAACTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479347.1 |
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| CDS GCA 90 bp | AGAGACAACCAGGTGGATATGTTAATTCCACAGTTAGCTAGAAGATaGAAAGCAAAACCTCTGAAGAGAAATGAGTGTAGATTAGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: RDNQVDMLIPQLARR*KAKPLKRNECRLES Trigger: ACTTTCTAATCTACACTCATTTCTCTTCAGAGGTTTTGCTTTGCATCTTCTAGCTAACTGTGGAATTAACATATCCACCTGGTTGTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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| CDS CCA 72 bp | GGCCGGGGGCACCGGCGACAGTTGCGGGGAAGGAAGTaGAATCTCGCCTTTGGGAAAGCCCGGGCGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GRGHRRQLRGRK*NLAFGKARAES Trigger: GCTCTCCGCCCGGGCTTTCCCAAAGGCGAGATTCCACTTCCTTCCCCGCAACTGTCGCCGGTGCCCCCGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425035.5 |
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| CDS TCA 72 bp | GTCAGGGCCGTTCTTGAGGGCTGCCCTCCGGCCGCCTaGCTGGAAAACCAGGCACTCCACCCCCTCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VRAVLEGCPPAA*LENQALHPLLS Trigger: GGAGAGGAGGGGGTGGAGTGCCTGGTTTTCCAGTCAGGCGGCCGGAGGGCAGCCCTCAAGAACGGCCCTGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537713.5 |
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| CDS CAA 90 bp | GGGGGCACCGGCGACAGTTGCGGGGAAGGAAGTGGAATCTCGCCTTaGGGAAAGCCCGGGCGGAGAGCTGAGGGCTCGCCGTCTCACCTT | + |
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Preference number: 6 (lower is better) Translates to: GGTGDSCGEGSGISP*GKPGRRAEGSPSHL Trigger: AAGGTGAGACGGCGAGCCCTCAGCTCTCCGCCCGGGCTTTCCCAAAGGCGAGATTCCACTTCCTTCCCCGCAACTGTCGCCGGTGCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425035.5 |
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| CDS GCA 72 bp | TCTCGGAGCAAGGTTCAGGTCCAAGTACCAAGGCTCTaGGGGACCAAGGGGCGGGTCCTGCCCAGAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SRSKVQVQVPRL*GTKGRVLPRKG Trigger: GCCCTTTCTGGGCAGGACCCGCCCCTTGGTCCCGCAGAGCCTTGGTACTTGGACCTGAACCTTGCTCCGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537713.5 |
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| CDS GCA 72 bp | GGCCCCTCTAAAGGGAGTTGCCCTGCTTACAGTCCCTaGCAAAGGGGAAGCCATAGACACATCCCTAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GPSKGSCPAYSP*QRGSHRHIPKS Trigger: TGACTTAGGGATGTGTCTATGGCTTCCCCTTTGGCAGGGACTGTAAGCAGGGCAACTCCCTTTAGAGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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| CDS TCA 72 bp | TGGCTAACGTCTTCTTCGTTTTGGTCTGGACAGCAATaGTCCATCCATATAGGAGCCAACCAGAAACCAGTG | + |
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Preference number: 6 (lower is better) Translates to: WLTSSSFWSGQQ*SIHIGANQKPV Trigger: CACTGGTTTCTGGTTGGCTCCTATATGGATGGATCATTGCTGTCCAGACCAAAACGAAGAAGACGTTAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545822.2 |
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| CDS TCA 72 bp | CGCCTGGCCTCATTTTTAAACTCGCTAACTTTGAGGTaGCAGAGAGACAACCAGGTGGATATGTTAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: RLASFLNSLTLR*QRDNQVDMLIP Trigger: TGGAATTAACATATCCACCTGGTTGTCTCTCTGTCACCTCAAAGTTAGCGAGTTTAAAAATGAGGCCAGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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| CDS CAA 72 bp | GAGAAGGCTGAGGGAATATGTGAGACAAACAGTAACTaGAGAGGTAGTAGGAGAATCAAGAGAGAACAGTAC | + |
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Preference number: 6 (lower is better) Translates to: EKAEGICETNSN*RGSRRIKREQY Trigger: GTACTGTTCTCTCTTGATTCTCCTACTACCTCTCAAGTTACTGTTTGTCTCACATATTCCCTCAGCCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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| CDS CAA 90 bp | CCCTACAATGAGAAGGCTGAGGGAATATGTGAGACAAACAGTAACTaGAGAGGTAGTAGGAGAATCAAGAGAGAACAGTACACAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: PYNEKAEGICETNSN*RGSRRIKREQYTRS Trigger: TGATCTTGTGTACTGTTCTCTCTTGATTCTCCTACTACCTCTCAAGTTACTGTTTGTCTCACATATTCCCTCAGCCTTCTCATTGTAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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| CDS TCA 72 bp | GATGTCATTCGTAAGCCAGAGTTTGTAAACCATAAGTaGGCAAATAAGCCAGCCAGAATGAAGAATGATAGA | + |
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Preference number: 6 (lower is better) Translates to: DVIRKPEFVNHK*ANKPARMKNDR Trigger: TCTATCATTCTTCATTCTGGCTGGCTTATTTGCTCACTTATGGTTTACAAACTCTGGCTTACGAATGACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494615.1 |
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