RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HACL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131373

Ensembl transcript IDs: ENST00000321169.10, ENST00000383779.8, ENST00000414979.1, ENST00000421993.5, ENST00000422591.5, ENST00000435217.6, ENST00000451445.6, ENST00000456194.6, ENST00000457447.6, ENST00000460907.1, ENST00000469454.1, ENST00000472857.1, ENST00000628377.2

Found 533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTCTGCACAGATATCAACCTGGATCTGGCTGCACCTACACAGTATaGATGGTTGTCAGGGACAACACCCTTCCCCATAGGGGTGGGCAA +
Preference number: 1 (lower is better)
Translates to: LLHRYQPGSGCTYTV*MVVRDNTLPHRGGQ
Trigger: TTGCCCACCCCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTTGATATCTGTGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383779.8
3UTR CCA 90 bp ATCAGCAAATTGCAAAGCCCTGGATCTGGCTGCACCTACACAGTATaGATGGTTGTCAGGGACAACACCCTTCCCCATAGGGGTGGGCAA +
Preference number: 1 (lower is better)
Translates to: ISKLQSPGSGCTYTV*MVVRDNTLPHRGGQ
Trigger: TTGCCCACCCCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGGCTTTGCAATTTGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR GCA 90 bp CCAGAAAACCCAAATGCACTGTCTCCTTCCACACAGATGATCCATTaGCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCA +
Preference number: 1 (lower is better)
Translates to: PENPNALSPSTQMIH*PGLLSLATTAAAIA
Trigger: TGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR GCA 90 bp GATGATCCATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTaGAATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACC +
Preference number: 1 (lower is better)
Translates to: DDPLPRASIFSHHGS*NSKSQTNSHCSEST
Trigger: GGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATGGATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR GCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATaGACTGTCTCCTTCCACACAGATGATCCATTGCCCAGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: VVPADGFYLHARKPK*TVSFHTDDPLPRAS
Trigger: AGAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR TCA 90 bp AAAATACCCTTTGCCTCCAAATGCAGTCATGACTTGCTCATAATGTaGATTTGGCAGCAAACACATTGGAGGGACCACTGCAGTAGCATC +
Preference number: 1 (lower is better)
Translates to: KIPFASKCSHDLLIM*IWQQTHWRDHCSSI
Trigger: GATGCTACTGCAGTGGTCCCTCCAATGTGTTTGCTGCCAAATTCACATTATGAGCAAGTCATGACTGCATTTGGAGGCAAAGGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR CCA 90 bp GTACTTTATAGAATTCACATTCACCTGAAGGTTCACAAAATCTGCTaGTATGTCAACATAGCAAGCACCTGGACGACCATAGATACTGCT +
Preference number: 1 (lower is better)
Translates to: VLYRIHIHLKVHKIC*YVNIASTWTTIDTA
Trigger: AGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGACATACCAGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTCTATAAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR GCA 90 bp CATGTACTTTATAGAATTCACATTCACCTGAAGGTTCACAAAATCTaGTGGTATGTCAACATAGCAAGCACCTGGACGACCATAGATACT +
Preference number: 1 (lower is better)
Translates to: HVLYRIHIHLKVHKI*WYVNIASTWTTIDT
Trigger: AGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGACATACCAGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTCTATAAAGTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CCA 90 bp TGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCCTTCCGCAAAGCCCTGGATCTaGCTGCACCTACACAGTATG +
Preference number: 2 (lower is better)
Translates to: WIWLHLHSMDGCQGQHPSAKPWI*LHLHSM
Trigger: CATACTGTGTAGGTGCAGCCAGATCCAGGGCTTTGC...GGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR CAA 90 bp GCCAGAAAACCCAAATGCACTGTCTCCTTCCACACAGATGATCCATaGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGC +
Preference number: 2 (lower is better)
Translates to: ARKPKCTVSFHTDDP*PRASIFSHHGSCNS
Trigger: GCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp CATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATCCCGCACAGATATCAACCTaGATCTGGCTGCACCTACAC +
Preference number: 2 (lower is better)
Translates to: HCPGLLSLATTAAAIANPAQIST*IWLHLH
Trigger: GTGTAGGTGCAGCCAGATCCAGGTTGATATCTGTGC...GGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383779.8
3UTR-3UTR CCA 90 bp GATCCATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAACAAATTGCAAAGCCCTaGATCTGGCTGCACCTACAC +
Preference number: 2 (lower is better)
Translates to: DPLPRASIFSHHGSCNSKQIAKP*IWLHLH
Trigger: GTGTAGGTGCAGCCAGATCCAGGGCTTTGCAATTTG...TTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp CAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGTTGAGTTTTCCACCACTTaGTCTCTGGAGGATACTGCC +
Preference number: 2 (lower is better)
Translates to: QPMKILGLPCGLWLNHDVEFSTT*SLEDTA
Trigger: GGCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTC...AACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CCA 90 bp ACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTACCTACACAGTATGGATaGTTGTCAGGGACAACACCC +
Preference number: 2 (lower is better)
Translates to: TNSHCSESTSIKPVTRKVPTQYG*LSGTTP
Trigger: GGGTGTTGTCCCTGACAACCATCCATACTGTGTAGG...TACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp GTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTTACCACCCACCACTTGCTCTCTaGAGGATACTGCCATGGTGT +
Preference number: 2 (lower is better)
Translates to: VLKHSPSNVHSICSFTYHPPLAL*RILPWC
Trigger: ACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGG...GTGGTAAGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR TCA 90 bp TGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGTCTGCCTCCTTCCACACAGATaGTCCATTGCCCAGGGCTTC +
Preference number: 2 (lower is better)
Translates to: CGLWLNHDVDKRRFSCVCLLPHR*SIAQGF
Trigger: GAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAG...GCAGACACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp TGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACTTGATACTCTCTTCTaGATGAGCGTAAGCAGCACC +
Preference number: 2 (lower is better)
Translates to: CRWFLPPCQKTQMHCLLPLDTLF*MSVSST
Trigger: GGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAG...TGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp AGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCAACCTGGATCTGGCTaGACCTACACAGTATGGATG +
Preference number: 2 (lower is better)
Translates to: SCTCRWFLPPCQKTQMHCQPGSG*TYTVWM
Trigger: CATCCATACTGTGTAGGTGCAGCCAGATCCAGGTTG...ACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383779.8
3UTR-3UTR GCA 90 bp ACCAGCATCAAGCCTGTGACGAGGAAGGTAGTTCTGAAGCACAGTCCGTCCAATCTCTCTGGAGGATACTaGCATGGTGTTTTATCAAGT +
Preference number: 2 (lower is better)
Translates to: TSIKPVTRKVVLKHSPSNLSGGY*HGVLSS
Trigger: ACTTGATAAAACACCATGGCAGTATCCTCCAGAGAG...ATTGGACGGACTGTGCTTCAGAACTACCTTCCTCGTCACAGGCTTGATGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp TCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTACCTACACAGTATGGATaGTTGTCAGGGACAACACCC +
Preference number: 2 (lower is better)
Translates to: STTCSLEDTAMVFYQVPLPTQYG*LSGTTP
Trigger: GGGTGTTGTCCCTGACAACCATCCATACTGTGTAGG...TAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp GCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGCACCTACACAGTATaGATGGTTGTCAGGGACAAC +
Preference number: 2 (lower is better)
Translates to: ASCTCRWFLPPCQKTQMHCTYTV*MVVRDN
Trigger: GTTGTCCCTGACAACCATCCATACTGTGTAGGTGCA...GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp TGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATCCCAAAGATAAACTTCACATCTaGCTGATATCTTGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CPGLLSLATTAAAIANPKDKLHI*LISWRQ
Trigger: CTGCCTCCAAGATATCAGCCAGATGTGAAGTTTATC...TTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR TCA 90 bp TTCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTCATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTA +
Preference number: 2 (lower is better)
Translates to: FHHLLSGGYCHGVLSSSSHANRR*HAAFHV
Trigger: TACATGGAACGCTGCATGTCACCTCCTATTAGCATG...AGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR TCA 90 bp TTCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAACTTCACATCTGGCTaGTATCTTGGAGGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: FHHLLSGGYCHGVLSSSSNFTSG*YLGGSP
Trigger: TGGACTGCCTCCAAGATATCAGCCAGATGTGAAGTT...AGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTCCTACACAGTATGGATaGTTGTCAGGGACAACACCC +
Preference number: 2 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPPTQYG*LSGTTP
Trigger: GGGTGTTGTCCCTGACAACCATCCATACTGTGTAGG...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp GAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACCCACCACTTGCTCTCTaGAGGATACTGCCATGGTGT +
Preference number: 2 (lower is better)
Translates to: EFFWCLYKIPFASKCSHDPPLAL*RILPWC
Trigger: ACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGG...GTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp GAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTGGCAGCAAACACATTaGAGGGACCACTGCAGTAGC +
Preference number: 2 (lower is better)
Translates to: EFFWCLYKIPFASKCSHDWQQTH*RDHCSS
Trigger: GCTACTGCAGTGGTCCCTCCAATGTGTTTGCTGCCA...GTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp ACAGCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAGCAAAGCCCTGGATCTaGCTGCACCTACACAGTATG +
Preference number: 2 (lower is better)
Translates to: TAGFTLFPNSSAQISTWIAKPWI*LHLHSM
Trigger: CATACTGTGTAGGTGCAGCCAGATCCAGGGCTTTGC...TATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp TGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAGCTGCTCAAATTGCAAAGCCCTaGATCTGGCTGCACCTACAC +
Preference number: 2 (lower is better)
Translates to: CSLEDTAMVFYQVPLKAAQIAKP*IWLHLH
Trigger: GTGTAGGTGCAGCCAGATCCAGGGCTTTGCAATTTG...AGCAGCTTTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp ACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTAATTCCCCAATTCTTCTaGACAGATATCAACCTGGAT +
Preference number: 2 (lower is better)
Translates to: TNSHCSESTSIKPVTRKVIPQFF*TDINLD
Trigger: ATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAAT...TACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp ACCAGCATCAAGCCTGTGACGAGGAAGGTAGTTCTGAAGCACAGTCCGTCCAATAATGTCCATAGTATTTaGTCCTTCACTTACCACGAA +
Preference number: 2 (lower is better)
Translates to: TSIKPVTRKVVLKHSPSNNVHSI*SFTYHE
Trigger: TTCGTGGTAAGTGAAGGAGCAAATACTATGGACATT...ATTGGACGGACTGTGCTTCAGAACTACCTTCCTCGTCACAGGCTTGATGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp GATCCATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAAAATGTCCATAGTATTTaGTCCTTCACTTACCACGAA +
Preference number: 2 (lower is better)
Translates to: DPLPRASIFSHHGSCNSKNVHSI*SFTYHE
Trigger: TTCGTGGTAAGTGAAGGAGCAAATACTATGGACATT...TTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp AACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTGTTCACAAAATCTGCTaGTATGTCAACATAGCAAGC +
Preference number: 2 (lower is better)
Translates to: NQLPLFRKYQHQACDEEGVHKIC*YVNIAS
Trigger: GCTTGCTATGTTGACATACCAGCAGATTTTGTGAAC...ACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CCA 90 bp AGCTGCTTAGTGACAGCATGTATGTTTCCTAGCAAAGTAACAGCGGGCTTTACATGCACCTACACAGTATaGATGGTTGTCAGGGACAAC +
Preference number: 2 (lower is better)
Translates to: SCLVTACMFPSKVTAGFTCTYTV*MVVRDN
Trigger: GTTGTCCCTGACAACCATCCATACTGTGTAGGTGCA...TGTAAAGCCCGCTGTTACTTTGCTAGGAAACATACATGCTGTCACTAAGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp GCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACGATAAACTTCACATCTaGCTGATATCTTGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: ASCTCRWFLPPCQKTQMHDKLHI*LISWRQ
Trigger: CTGCCTCCAAGATATCAGCCAGATGTGAAGTTTATC...GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp TGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCAGCACAGATATCAACCTaGATAAACTTCACATCTGGC +
Preference number: 2 (lower is better)
Translates to: CRWFLPPCQKTQMHCLLPAQIST*INFTSG
Trigger: GCCAGATGTGAAGTTTATCCAGGTTGATATCTGTGC...TGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp AAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTACATATTAGAGCGGGTGTGTCTGCTAGGCTCTaGCTCAGGGATTTTTGGAGT +
Preference number: 2 (lower is better)
Translates to: KRKLKTTNWRLYLHIRAGVSARL*LRDFWS
Trigger: ACTCCAAAAATCCCTGAGGCAGAGCCTAGCAGACAC...ACCCGCTCTAATATGTAAATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CCA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTAACATAGCAAGCACCTaGACGACCATAGATACTGCT +
Preference number: 2 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPNIAST*TTIDTA
Trigger: AGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTT...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACAGTTCACAAAATCTGCTaGTATGTCAACATAGCAAGC +
Preference number: 2 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTVHKIC*YVNIAS
Trigger: GCTTGCTATGTTGACATACCAGCAGATTTTGTGAAC...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CCA 90 bp ACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAATGCACCTACACAGTATaGATGGTTGTCAGGGACAAC +
Preference number: 2 (lower is better)
Translates to: TTCSLEDTAMVFYQVPLKCTYTV*MVVRDN
Trigger: GTTGTCCCTGACAACCATCCATACTGTGTAGGTGCA...TTTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCCCACCACTTGCTCTCTaGAGGATACTGCCATGGTGT +
Preference number: 2 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFPPLAL*RILPWC
Trigger: ACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGG...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGACGACCATAGATACTaGTTCTCACTGCCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPDDHRY*FSLPFQ
Trigger: TTGAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTC...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR GCA 90 bp TTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATTTGGCAAGTTGTACCTaGAGATGGTTTCTACCTCCA +
Preference number: 2 (lower is better)
Translates to: LEFFWCLYKIPFASKCSHLASCT*RWFLPP
Trigger: TGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAA...ATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CCA 90 bp AGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTAACATAGCAAGCACCTaGACGACCATAGATACTGCT +
Preference number: 2 (lower is better)
Translates to: SSSGVCTKYPLPPNAVMTNIAST*TTIDTA
Trigger: AGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTT...AGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CCA 90 bp GCATGTATGTTTCCTAGCAAAGTAACAGCGGGCTTTACATTATTCCCCAATTCTAGGGGTGGGCAAAAATaGCAGTTTATATTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: ACMFPSKVTAGFTLFPNSRGGQK*QFILLH
Trigger: GTGGAGCAATATAAACTGCCATTTTTGCCCACCCCT...AGAATTGGGGAATAATGTAAAGCCCGCTGTTACTTTGCTAGGAAACATACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR TCA 90 bp TGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGTCTGCGAATTCACATTCACCTaGAGGTTCACAAAATCTGCT +
Preference number: 2 (lower is better)
Translates to: CGLWLNHDVDKRRFSCVCEFTFT*RFTKSA
Trigger: AGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTC...GCAGACACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR TCA 90 bp ACAGCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAGAATTCACATTCACCTaGAGGTTCACAAAATCTGCT +
Preference number: 2 (lower is better)
Translates to: TAGFTLFPNSSAQISTWIEFTFT*RFTKSA
Trigger: AGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTC...TATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628377.2
3UTR-3UTR GCA 90 bp GTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACCTCTCTGGAGGATACTaGCATGGTGTTTTATCAAGT +
Preference number: 2 (lower is better)
Translates to: VIHYQQYDWQVVPADGFYLSGGY*HGVLSS
Trigger: ACTTGATAAAACACCATGGCAGTATCCTCCAGAGAG...GTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp TTTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCACATTGGAGGGACCACTaGAGTAGCATCTTGAAATTT +
Preference number: 2 (lower is better)
Translates to: FGVLLVFVQNTLCLQMQSHWRDH*SSILKF
Trigger: AAATTTCAAGATGCTACTGCAGTGGTCCCTCCAATG...TGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp AGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTATTACATCAGCAAATTaGAAAGCCCTGGATCTGGCT +
Preference number: 2 (lower is better)
Translates to: SSSGVCTKYPLPPNAVMTITSAN*KALDLA
Trigger: AGCCAGATCCAGGGCTTTGCAATTTGCTGATGTAAT...AGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR TCA 90 bp TTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTACATATTACATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTA +
Preference number: 2 (lower is better)
Translates to: LQERENSRPPTGVFIYILHANRR*HAAFHV
Trigger: TACATGGAACGCTGCATGTCACCTCCTATTAGCATG...TAATATGTAAATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR TCA 90 bp ACCTTGGTAAATTCCATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTAAACTTCACATCTGGCTaGTATCTTGGAGGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: TLVNSIVIHYQQYDWQVVNFTSG*YLGGSP
Trigger: TGGACTGCCTCCAAGATATCAGCCAGATGTGAAGTT...TACAACTTGCCAATCATACTGTTGGTAGTGAATAACAATGGAATTTACCAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp ATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAAACTTCACATCTGGATTACATCAGCAAATTaGAAAGCCCTGGATCTGGCT +
Preference number: 2 (lower is better)
Translates to: IIPQFFCTDINLDKLHIWITSAN*KALDLA
Trigger: AGCCAGATCCAGGGCTTTGCAATTTGCTGATGTAAT...CCAGATGTGAAGTTTATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR GCA 90 bp AAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTACATATTAGAGCGGGTGATACTGCTTCTCACTaGCTTTTCAATAACAAAAGG +
Preference number: 2 (lower is better)
Translates to: KRKLKTTNWRLYLHIRAGDTASH*LFNNKR
Trigger: CCTTTTGTTATTGAAAAGGCAGTGAGAAGCAGTATC...ACCCGCTCTAATATGTAAATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR GCA 90 bp TACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAGCTGCTTAGTGACAGCATGTAAGGTTCACAAAATCTaGTGGTATGTCAACATAGCA +
Preference number: 2 (lower is better)
Translates to: YCHGVLSSSSKSCLVTACKVHKI*WYVNIA
Trigger: TGCTATGTTGACATACCAGCAGATTTTGTGAACCTT...ACATGCTGTCACTAAGCAGCTTTTAGAGGAACTTGATAAAACACCATGGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR GCA 90 bp ATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTACATACTCTCTGGAGGATACTaGCATGGTGTTTTATCAAGT +
Preference number: 2 (lower is better)
Translates to: ILQERENSRPPTGVFIYILSGGY*HGVLSS
Trigger: ACTTGATAAAACACCATGGCAGTATCCTCCAGAGAG...TATGTAAATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR GCA 90 bp ATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTACATAAATGTCCATAGTATTTaGTCCTTCACTTACCACGAA +
Preference number: 2 (lower is better)
Translates to: ILQERENSRPPTGVFIYINVHSI*SFTYHE
Trigger: TTCGTGGTAAGTGAAGGAGCAAATACTATGGACATT...TATGTAAATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR CCA 72 bp AAAGCCCTGGATCTGGCTGCACCTACACAGTATGGATaGTTGTCAGGGACAACACCCTTCCCCATAGGGGTG +
Preference number: 3 (lower is better)
Translates to: KALDLAAPTQYG*LSGTTPFPIGV
Trigger: CACCCCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR CCA 72 bp ATCAACCTGGATCTGGCTGCACCTACACAGTATGGATaGTTGTCAGGGACAACACCCTTCCCCATAGGGGTG +
Preference number: 3 (lower is better)
Translates to: INLDLAAPTQYG*LSGTTPFPIGV
Trigger: CACCCCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383779.8
3UTR CCA 72 bp TTGCAAAGCCCTGGATCTGGCTGCACCTACACAGTATaGATGGTTGTCAGGGACAACACCCTTCCCCATAGG +
Preference number: 3 (lower is better)
Translates to: LQSPGSGCTYTV*MVVRDNTLPHR
Trigger: CCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGGCTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp GCGGGTCAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATAGAGTTTTCCACCACTaGCTCTCTGGAGGATACTGC +
Preference number: 3 (lower is better)
Translates to: AGQPMKILGLPCGLWLNHRVFHH*LSGGYC
Trigger: GCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTCT...ATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTGACCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR GCA 72 bp TTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTaGAATAGCAAATCCCAAACCAACTCCCATTGTTCC +
Preference number: 3 (lower is better)
Translates to: LPRASIFSHHGS*NSKSQTNSHCS
Trigger: GGAACAATGGGAGTTGGTTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR CCA 72 bp AGATATCAACCTGGATCTGGCTGCACCTACACAGTATaGATGGTTGTCAGGGACAACACCCTTCCCCATAGG +
Preference number: 3 (lower is better)
Translates to: RYQPGSGCTYTV*MVVRDNTLPHR
Trigger: CCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTTGATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383779.8
3UTR-3UTR CAA 90 bp ACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTAACACAGTATGGATGGTaGTCAGGGACAACACCCTTC +
Preference number: 3 (lower is better)
Translates to: TNSHCSESTSIKPVTRKVTQYGW*SGTTPF
Trigger: GAAGGGTGTTGTCCCTGACAACCATCCATACTGTGT...TACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR GCA 72 bp GCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATaGACTGTCTCCTTCCACACAGATGATCCATTGCCC +
Preference number: 3 (lower is better)
Translates to: ADGFYLHARKPK*TVSFHTDDPLP
Trigger: GGGCAATGGATCATCTGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp TCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAACACAGTATGGATGGTaGTCAGGGACAACACCCTTC +
Preference number: 3 (lower is better)
Translates to: STTCSLEDTAMVFYQVPLTQYGW*SGTTPF
Trigger: GAAGGGTGTTGTCCCTGACAACCATCCATACTGTGT...TAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCCCAAACCAACTCCCATaGTTCCGAAAGTACCAGCAT +
Preference number: 3 (lower is better)
Translates to: VVPADGFYLHARKPKCTVPNQLP*FRKYQH
Trigger: ATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGG...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp CACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAGAGTTTTCCACCACTaGCTCTCTGGAGGATACTGC +
Preference number: 3 (lower is better)
Translates to: HHLLSGGYCHGVLSSSSKRVFHH*LSGGYC
Trigger: GCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTCT...TTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp ATTGGCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATAGAGTTTTCCACCACTaGCTCTCTGGAGGATACTGC +
Preference number: 3 (lower is better)
Translates to: IGKLYLQMVSTSMPENPNRVFHH*LSGGYC
Trigger: GCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTCT...ATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp TGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACATCTGGCTGATATCTaGGAGGCAGTCCAAAATGTA +
Preference number: 3 (lower is better)
Translates to: CRWFLPPCQKTQMHCLLPHLADI*EAVQNV
Trigger: TACATTTTGGACTGCCTCCAAGATATCAGCCAGATG...TGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp CCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATTGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG +
Preference number: 3 (lower is better)
Translates to: PMKILGLPCGLWLNHDVDCTKYP*PPNAVM
Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACA...ATCAACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR TCA 72 bp GCACACAGCAGAGGTTTCTGCCATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTACTTTATAGAATTCAC +
Preference number: 3 (lower is better)
Translates to: AHSRGFCHANRR*HAAFHVLYRIH
Trigger: GTGAATTCTATAAAGTACATGGAACGCTGCATGTCACCTCCTATTAGCATGGCAGAAACCTCTGCTGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR GCA 72 bp AGTAACAGCGGGCTTTACATTATTCCCCAATTCTTCTaGACAGATATCAACCTGGATCTGGCTGCACCTACA +
Preference number: 3 (lower is better)
Translates to: SNSGLYIIPQFF*TDINLDLAAPT
Trigger: TGTAGGTGCAGCCAGATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383779.8
3UTR CCA 72 bp CACAAAATCTGCTGGTATGTCAACATAGCAAGCACCTaGACGACCATAGATACTGCTTCTCACTGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: HKICWYVNIAST*TTIDTASHCLF
Trigger: GAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGACATACCAGCAGATTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR CCA 72 bp CAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTaGCTCAATCATGATGTTGATAAGAGAAGGTTTAGT +
Preference number: 3 (lower is better)
Translates to: QPMKILGLPCGL*LNHDVDKRRFS
Trigger: ACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CAA 90 bp ACCAACTGGCGTCTTTATTTACATATTAGAGCGGGTCAGCCAATGAAAATCCTGCACACAGATGATCCATaGCCCAGGGCTTCTATCTTT +
Preference number: 3 (lower is better)
Translates to: TNWRLYLHIRAGQPMKILHTDDP*PRASIF
Trigger: AAAGATAGAAGCCCTGGGCAATGGATCATCTGTGTG...CAGGATTTTCATTGGCTGACCCGCTCTAATATGTAAATAAAGACGCCAGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CAA 90 bp TGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGTCTGCCATCTGGCTGATATCTaGGAGGCAGTCCAAAATGTA +
Preference number: 3 (lower is better)
Translates to: CGLWLNHDVDKRRFSCVCHLADI*EAVQNV
Trigger: TACATTTTGGACTGCCTCCAAGATATCAGCCAGATG...GCAGACACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR GCA 72 bp TATAGAATTCACATTCACCTGAAGGTTCACAAAATCTaGTGGTATGTCAACATAGCAAGCACCTGGACGACC +
Preference number: 3 (lower is better)
Translates to: YRIHIHLKVHKI*WYVNIASTWTT
Trigger: GGTCGTCCAGGTGCTTGCTATGTTGACATACCAGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR CCA 72 bp AGAATTCACATTCACCTGAAGGTTCACAAAATCTGCTaGTATGTCAACATAGCAAGCACCTGGACGACCATA +
Preference number: 3 (lower is better)
Translates to: RIHIHLKVHKIC*YVNIASTWTTI
Trigger: TATGGTCGTCCAGGTGCTTGCTATGTTGACATACCAGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
3UTR-3UTR CAA 90 bp GTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACAATTACATCAGCAAATaGCAAAGCCCTGGATCTGGC +
Preference number: 3 (lower is better)
Translates to: VIHYQQYDWQVVPADGFYNYISK*QSPGSG
Trigger: GCCAGATCCAGGGCTTTGCAATTTGCTGATGTAATT...GTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR GCA 72 bp TTTATATTGCTCCACCAATTTCTTGATACTCTCTTCTaGATGAGCGTAAGCAGCACCTTTCCCGATGATAAG +
Preference number: 3 (lower is better)
Translates to: FILLHQFLDTLF*MSVSSTFPDDK
Trigger: CTTATCATCGGGAAAGGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGCAATATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTATAAGAAGGGGTTGTTaGGCATTCCTAATAACAGAA +
Preference number: 3 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPIRRGC*AFLITE
Trigger: TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTAT...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp ACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAATAAGAAGGGGTTGTTaGGCATTCCTAATAACAGAA +
Preference number: 3 (lower is better)
Translates to: TTCSLEDTAMVFYQVPLKIRRGC*AFLITE
Trigger: TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTAT...TTTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR-3UTR CAA 90 bp GTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACGATGATAAGAAGGGGTaGTTTGGCATTCCTAATAAC +
Preference number: 3 (lower is better)
Translates to: VIHYQQYDWQVVPADGFYDDKKG*FGIPNN
Trigger: GTTATTAGGAATGCCAAACAACCCCTTCTTATCATC...GTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
3UTR CAA 72 bp GCCCTGGATCTGGCTGCACCTACACAGTATGGATGGTaGTCAGGGACAACACCCTTCCCCATAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ALDLAAPTQYGW*SGTTPFPIGVG
Trigger: GCCCACCCCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AGCCCTGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCGCTGCTGGGCAGCAATaGCGATTTCGGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: SPGSGCTYTVWMVVRDNTAAGQQ*RFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGC...GGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
3UTR CAA 72 bp AACCTGGATCTGGCTGCACCTACACAGTATGGATGGTaGTCAGGGACAACACCCTTCCCCATAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NLDLAAPTQYGW*SGTTPFPIGVG
Trigger: GCCCACCCCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383779.8
CDS-3UTR TCA 90 bp GGTCAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATCGCCCAAGGCATGGATaGGACCTGGGCCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: GQPMKILGLPCGLWLNHDRPRHG*DLGQKQ
Trigger: TTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCG...ATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp TGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCCTTCCATACCGCCCAAGGCATaGATGAGACCTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: WIWLHLHSMDGCQGQHPSIPPKA*MRPGPE
Trigger: TTCTGGCCCAGGTCTCATCCATGCCTTGGGCGGTAT...GGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GCGGGTCAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGTGTCTGCTAGGCTCTaGCTCAGGGATTTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGQPMKILGLPCGLWLNHVSARL*LRDFWS
Trigger: ACTCCAAAAATCCCTGAGGCAGAGCCTAGCAGACAC...ATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTGACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR GCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACACGCCACCTCTGGTACTaGACCTCTGACGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTRHLWY*TSDGQE
Trigger: CTCCTGTCCGTCAGAGGTGCAGTACCAGAGGTGGCG...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR CCA 90 bp CATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATCCCAGCTTCTATGCTGCTTaGGCGGGCAGAGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: HCPGLLSLATTAAAIANPSFYAA*AGRELG
Trigger: ACCAAGTTCTCTGCCCGCCCAAGCAGCATAGAAGCT...GGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp TGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCATCCGAGTCGGCCAGCTaGAGCGTTTTCGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: CRWFLPPCQKTQMHCLLPSESAS*SVFGAV
Trigger: TACAGCCCCGAAAACGCTCCAGCTGGCCGACTCGGA...TGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR TCA 90 bp GCGGGTCAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATAACTTCACATCTGGCTaGTATCTTGGAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGQPMKILGLPCGLWLNHNFTSG*YLGGSP
Trigger: TGGACTGCCTCCAAGATATCAGCCAGATGTGAAGTT...ATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTGACCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR GCA 90 bp TCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTATTAGCACCAGACACCTaGTCCTCGCTGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: STTCSLEDTAMVFYQVPLLAPDT*SSLRSA
Trigger: CGCAGAGCGCAGCGAGGAGCAGGTGTCTGGTGCTAA...TAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAGGTTTCAGCCACCACGGCAGCTaGAATAGCAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: GLFGIPNNRSRRAHSRGFSHHGS*NSKSQT
Trigger: GGTTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCT...GAAACCTCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GATCCATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATTGATGCCTAGCTGCTaGGCAGCAATGGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: DPLPRASIFSHHGSCNSKLMPSC*AAMAIS
Trigger: CGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAA...TTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVSSRCT*CLAAGQ
Trigger: CTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGA...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp TGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACTCCTTCCACACAGATaGTCCATTGCCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: CRWFLPPCQKTQMHCLLPLLPHR*SIAQGF
Trigger: GAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAG...TGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCCTCCTTCCACACAGATaGTCCATTGCCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVLLPHR*SIAQGF
Trigger: GAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAG...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp ATAGCAAGCACCTGGACGACCATAGATACTGCTTCTCACTGCCTTTTCAATAACCTGGTACTGCACCTCTaGCGGACAGGAGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: IASTWTTIDTASHCLFNNLVLHL*RTGGQP
Trigger: TGGTTGCCCTCCTGTCCGTCAGAGGTGCAGTACCAG...GTTATTGAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTCCAGGTGCTTGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR TCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACAACTTCCCGGGAGAGGTaGGAATGTAAACACGCGCGT +
Preference number: 4 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTTSRER*ECKHAR
Trigger: ACGCGCGTGTTTACATTCTCACCTCTCCCGGGAAGT...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR GCA 90 bp ACCAGCATCAAGCCTGTGACGAGGAAGGTAGTTCTGAAGCACAGTCCGTCCAATTACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATT +
Preference number: 4 (lower is better)
Translates to: TSIKPVTRKVVLKHSPSNYLMPS*WAAMAI
Trigger: AATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTA...ATTGGACGGACTGTGCTTCAGAACTACCTTCCTCGTCACAGGCTTGATGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATCCCAAAGAGTTTTCCACCACTTaGTCTCTGGAGGATACTGCC +
Preference number: 4 (lower is better)
Translates to: CPGLLSLATTAAAIANPKEFSTT*SLEDTA
Trigger: GGCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTC...TTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp ACCAGCATCAAGCCTGTGACGAGGAAGGTAGTTCTGAAGCACAGTCCGTCCAATGAGTTTTCCACCACTTaGTCTCTGGAGGATACTGCC +
Preference number: 4 (lower is better)
Translates to: TSIKPVTRKVVLKHSPSNEFSTT*SLEDTA
Trigger: GGCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTC...ATTGGACGGACTGTGCTTCAGAACTACCTTCCTCGTCACAGGCTTGATGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCCTTCCGCCAGAAAACCCAAATaGACTGTCTCCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: WIWLHLHSMDGCQGQHPSARKPK*TVSFHT
Trigger: TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGC...GGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGCAGCACGCCACCTCTaGTACTGCACCTCTGACGGA +
Preference number: 4 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPAARHL*YCTSDG
Trigger: TCCGTCAGAGGTGCAGTACCAGAGGTGGCGTGCTGC...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR TCA 90 bp CCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATTGCGTTTTCAGGGCCTaGGCGATGACTTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: PMKILGLPCGLWLNHDVDCVFRA*AMTLAP
Trigger: TGGTGCTAAAGTCATCGCTCAGGCCCTGAAAACGCA...ATCAACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR TCA 90 bp TTCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FHHLLSGGYCHGVLSSSSSSRCT*CLAAGQ
Trigger: CTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGA...AGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp AAGGTAGTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTCGCCCAAGGCATGGATaGGACCTGGGCCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: KVVLKHSPSNVHSICSFTRPRHG*DLGQKQ
Trigger: TTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCG...AGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAACTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp TTCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTCTCCTTCCACACAGATaGTCCATTGCCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: FHHLLSGGYCHGVLSSSSLLPHR*SIAQGF
Trigger: GAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAG...AGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp ATTGGCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGAGCGGGTCAGCCAATaGAAATCCTGGGCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: IGKLYLQMVSTSMPENPNERVSQ*KSWAFR
Trigger: ACGGAAGGCCCAGGATTTTCATTGGCTGACCCGCTC...ATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR TCA 90 bp GCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGAGCGGGTCAGCCAATaGAAATCCTGGGCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: AAPFPMIRRGCLAFLITEERVSQ*KSWAFR
Trigger: ACGGAAGGCCCAGGATTTTCATTGGCTGACCCGCTC...TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR GCA 90 bp AAGGTAGTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTCTCCTCGCTGCGCTCTaGGAAGTTACTGTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KVVLKHSPSNVHSICSFTLLAAL*EVTVRH
Trigger: ATGCCGGACAGTAACTTCGCAGAGCGCAGCGAGGAG...AGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAACTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTTGCTTAGCACCAGACACCTaGTCCTCGCTGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SSGVCTKYPLPPNAVMTCLAPDT*SSLRSA
Trigger: CGCAGAGCGCAGCGAGGAGCAGGTGTCTGGTGCTAA...GCAAGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACAGCCACCACGGCAGCTaGAATAGCAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: ASCTCRWFLPPCQKTQMHSHHGS*NSKSQT
Trigger: GGTTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCT...GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAGGTTTCGCCAGAAAACCCAAATaGACTGTCTCCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: GLFGIPNNRSRRAHSRGFARKPK*TVSFHT
Trigger: TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGC...GAAACCTCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTGTGTCTGCTAGGCTCTaGCTCAGGGATTTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: NQLPLFRKYQHQACDEEGVSARL*LRDFWS
Trigger: ACTCCAAAAATCCCTGAGGCAGAGCCTAGCAGACAC...ACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACATTCGCGCGCCAGAATaGCAGAGGGAGGCGGGACTA +
Preference number: 4 (lower is better)
Translates to: EFFWCLYKIPFASKCSHDIRAPE*QREAGL
Trigger: TAGTCCCGCCTCCCTCTGGCATTCTGGCGCGCGAAT...GTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR GCA 90 bp AACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTTTCTCCAATCAGAACTaGGCTCTCTTCTCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NQLPLFRKYQHQACDEEGFSNQN*ALFSAP
Trigger: AGGAGCCGAGAAGAGAGCGCAGTTCTGATTGGAGAA...ACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR CCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCGGCGATTTCGGTCACTaGGATGCCTACGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVGDFGH*DAYDAK
Trigger: TTTGGCATCGTAGGCATCCCAGTGACCGAAATCGCC...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTTGATGCCTAGCTGCTaGGCAGCAATGGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVLMPSC*AAMAIS
Trigger: CGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAA...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTATACCGCCCAAGGCATaGATGAGACCTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SCTCRWFLPPCQKTQMHCIPPKA*MRPGPE
Trigger: TTCTGGCCCAGGTCTCATCCATGCCTTGGGCGGTAT...ACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp TTCTTCTGCACAGATATCAACCTGGATCTGGCTGCACCTACACAGTATGGATGGAGCTTCTATGCTGCTTaGGCGGGCAGAGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: FFCTDINLDLAAPTQYGWSFYAA*AGRELG
Trigger: ACCAAGTTCTCTGCCCGCCCAAGCAGCATAGAAGCT...CCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTTGATATCTGTGCAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383779.8
CDS-3UTR CCA 90 bp GTCAACATAGCAAGCACCTGGACGACCATAGATACTGCTTCTCACTGCCTTTTCGCAAAGCCCTGGATCTaGCTGCACCTACACAGTATG +
Preference number: 4 (lower is better)
Translates to: VNIASTWTTIDTASHCLFAKPWI*LHLHSM
Trigger: CATACTGTGTAGGTGCAGCCAGATCCAGGGCTTTGC...GAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR CCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTGGCAGCAAACACATTaGAGGGACCACTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVWQQTH*RDHCSS
Trigger: GCTACTGCAGTGGTCCCTCCAATGTGTTTGCTGCCA...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp CCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATTGGCAGCAAACACATTaGAGGGACCACTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: PMKILGLPCGLWLNHDVDWQQTH*RDHCSS
Trigger: GCTACTGCAGTGGTCCCTCCAATGTGTTTGCTGCCA...ATCAACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp ACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTAGCACAGATATCAACCTaGATCTGGCTGCACCTACAC +
Preference number: 4 (lower is better)
Translates to: TNSHCSESTSIKPVTRKVAQIST*IWLHLH
Trigger: GTGTAGGTGCAGCCAGATCCAGGTTGATATCTGTGC...TACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383779.8
3UTR CAA 72 bp AGCGTAAGCAGCACCTTTCCCGATGATAAGAAGGGGTaGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: SVSSTFPDDKKG*FGIPNNRSRRA
Trigger: TGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGCTTACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATTTAGCACCAGACACCTaGTCCTCGCTGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LEFFWCLYKIPFASKCSHLAPDT*SSLRSA
Trigger: CGCAGAGCGCAGCGAGGAGCAGGTGTCTGGTGCTAA...ATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAGGTTTCCTGGGATGCCTACGATaGCAAATATGTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: GLFGIPNNRSRRAHSRGFLGCLR*QICTPH
Trigger: ATGTGGAGTACATATTTGGCATCGTAGGCATCCCAG...GAAACCTCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATT +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVYLMPS*WAAMAI
Trigger: AATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTA...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp ACAGCAGAGGTTTCTGCCATGCTAATAGGAGGTGACATGCAGCGTTCCATGTACCCAGCAGTTCATGTTTaGATTTGCCATACCGCCCAA +
Preference number: 4 (lower is better)
Translates to: TAEVSAMLIGGDMQRSMYPAVHV*ICHTAQ
Trigger: TTGGGCGGTATGGCAAATGCAAACATGAACTGCTGG...GTACATGGAACGCTGCATGTCACCTCCTATTAGCATGGCAGAAACCTCTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR GCA 90 bp CCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACCTTGATACTCTCTTCTaGATGAGCGTAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PMIRRGCLAFLITEAAVHLDTLF*MSVSST
Trigger: GGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAG...GTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCCTTCCCTCTCTGGAGGATACTaGCATGGTGTTTTATCAAGT +
Preference number: 4 (lower is better)
Translates to: WIWLHLHSMDGCQGQHPSLSGGY*HGVLSS
Trigger: ACTTGATAAAACACCATGGCAGTATCCTCCAGAGAG...GGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp ACCAGCATCAAGCCTGTGACGAGGAAGGTAGTTCTGAAGCACAGTCCGTCCAATTTGGCAAGTTGTACCTaGAGATGGTTTCTACCTCCA +
Preference number: 4 (lower is better)
Translates to: TSIKPVTRKVVLKHSPSNLASCT*RWFLPP
Trigger: TGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAA...ATTGGACGGACTGTGCTTCAGAACTACCTTCCTCGTCACAGGCTTGATGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGACTAGCAGGAGATTGCTaGCTATGCAAAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: KKGLFGIPNNRSRRAHSRLAGDC*LCKAGK
Trigger: CTTACCTGCTTTGCATAGGCAGCAATCTCCTGCTAG...TCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR CCA 90 bp GTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTTACCACGGCGATTTCGGTCACTaGGATGCCTACGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: VLKHSPSNVHSICSFTYHGDFGH*DAYDAK
Trigger: TTTGGCATCGTAGGCATCCCAGTGACCGAAATCGCC...GTGGTAAGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCCAAATTGCAAAGCCCTaGATCTGGCTGCACCTACAC +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVQIAKP*IWLHLH
Trigger: GTGTAGGTGCAGCCAGATCCAGGGCTTTGCAATTTG...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AGCGTAAGCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATCCACCACTTGCTCTCTaGAGGATACTGCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: SVSSTFPDDKKGLFGIPNPPLAL*RILPWC
Trigger: ACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGG...ATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGCTTACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GCACAGATATCAACCTGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGAGTTGTACCTGCAGATaGTTTCTACCTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: AQISTWIWLHLHSMDGCQSCTCR*FLPPCQ
Trigger: CTGGCATGGAGGTAGAAACCATCTGCAGGTACAACT...CTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTTGATATCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383779.8
CDS-3UTR CCA 90 bp AGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAGCTTCCGTGTGGCTTGTaGCTCAATCATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: RRGCLAFLITEAAVHTAELPCGL*LNHDVD
Trigger: ATCAACATCATGATTGAGCCACAAGCCACACGGAAG...CTCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTTGCGTTTTCAGGGCCTaGGCGATGACTTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPCVFRA*AMTLAP
Trigger: TGGTGCTAAAGTCATCGCTCAGGCCCTGAAAACGCA...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp TTTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCACGCCCAAGGCATGGATaGGACCTGGGCCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: FGVLLVFVQNTLCLQMQSRPRHG*DLGQKQ
Trigger: TTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCG...TGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCCATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVHANRR*HAAFHV
Trigger: TACATGGAACGCTGCATGTCACCTCCTATTAGCATG...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACACATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTHANRR*HAAFHV
Trigger: TACATGGAACGCTGCATGTCACCTCCTATTAGCATG...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp CCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATCATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: PMKILGLPCGLWLNHDVDHANRR*HAAFHV
Trigger: TACATGGAACGCTGCATGTCACCTCCTATTAGCATG...ATCAACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR TCA 90 bp AAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGATCACTACCAACAGTATaGTTGGCAAGTTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: KKGLFGIPNNRSRRAHSRSLPTV*LASCTC
Trigger: GCAGGTACAACTTGCCAATCATACTGTTGGTAGTGA...TCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACCTCCTCGCTGCGCTCTaGGAAGTTACTGTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: VIHYQQYDWQVVPADGFYLLAAL*EVTVRH
Trigger: ATGCCGGACAGTAACTTCGCAGAGCGCAGCGAGGAG...GTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTTTTCGGTCACTGGGATaGCTACGATGCCAAATATGT +
Preference number: 4 (lower is better)
Translates to: NQLPLFRKYQHQACDEEGFRSLG*LRCQIC
Trigger: ACATATTTGGCATCGTAGGCATCCCAGTGACCGAAA...ACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACACCAGCAGTTCATGTTTaGATTTGCCATACCGCCCAA +
Preference number: 4 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTPAVHV*ICHTAQ
Trigger: TTGGGCGGTATGGCAAATGCAAACATGAACTGCTGG...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTAGCCACCACGGCAGCTaGAATAGCAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPSHHGS*NSKSQT
Trigger: GGTTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCT...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGATGGTTTCTACCTCCATaGCAGAAAACCCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: KKGLFGIPNNRSRRAHSRWFLPP*QKTQMH
Trigger: GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCA...TCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp CCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCCCTTTGCCTCCAAATaGAGTCATGACTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: PADGFYLHARKPKCTVSFPFASK*SHDLLI
Trigger: TATGAGCAAGTCATGACTGCATTTGGAGGCAAAGGG...GAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GCATGTATGTTTCCTAGCAAAGTAACAGCGGGCTTTACATTATTCCCCAATTCTGCTGCTGGGCAGCAATaGCGATTTCGGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: ACMFPSKVTAGFTLFPNSAAGQQ*RFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGC...AGAATTGGGGAATAATGTAAAGCCCGCTGTTACTTTGCTAGGAAACATACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACGCTGCTGGGCAGCAATaGCGATTTCGGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: VIHYQQYDWQVVPADGFYAAGQQ*RFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGC...GTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AGCTGCTTAGTGACAGCATGTATGTTTCCTAGCAAAGTAACAGCGGGCTTTACATTGATGCCTAGCTGCTaGGCAGCAATGGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: SCLVTACMFPSKVTAGFTLMPSC*AAMAIS
Trigger: CGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAA...TGTAAAGCCCGCTGTTACTTTGCTAGGAAACATACATGCTGTCACTAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp TCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTTGCATACCGCCCAAGGCATaGATGAGACCTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSGVCTKYPLPPNAVMTCIPPKA*MRPGPE
Trigger: TTCTGGCCCAGGTCTCATCCATGCCTTGGGCGGTAT...GCAAGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp CACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAGCAAAGCCCTGGATCTaGCTGCACCTACACAGTATG +
Preference number: 4 (lower is better)
Translates to: HHLLSGGYCHGVLSSSSKAKPWI*LHLHSM
Trigger: CATACTGTGTAGGTGCAGCCAGATCCAGGGCTTTGC...TTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp CATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATCCCTACCAACAGTATGATTaGCAAGTTGTACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: HCPGLLSLATTAAAIANPYQQYD*QVVPAD
Trigger: ATCTGCAGGTACAACTTGCCAATCATACTGTTGGTA...GGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAATGGCAGCAAACACATTaGAGGGACCACTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: AAPFPMIRRGCLAFLITEWQQTH*RDHCSS
Trigger: GCTACTGCAGTGGTCCCTCCAATGTGTTTGCTGCCA...TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGACTTCCGTGTGGCTTGTaGCTCAATCATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: KKGLFGIPNNRSRRAHSRLPCGL*LNHDVD
Trigger: ATCAACATCATGATTGAGCCACAAGCCACACGGAAG...TCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp AGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSGVCTKYPLPPNAVMTSSRCT*CLAAGQ
Trigger: CTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGA...AGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp AGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAGGAATTCACATTCACCTaGAGGTTCACAAAATCTGCT +
Preference number: 4 (lower is better)
Translates to: RRGCLAFLITEAAVHTAEEFTFT*RFTKSA
Trigger: AGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTC...CTCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR TCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCGCTCCACCAATTTCTTaGTACTCTCTTCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVAPPIS*YSLLHE
Trigger: CTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGC...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp GGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAGGTTTCGACTTGCTCATAATGTaGATTTGGCAGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: GLFGIPNNRSRRAHSRGFDLLIM*IWQQTH
Trigger: ATGTGTTTGCTGCCAAATTCACATTATGAGCAAGTC...GAAACCTCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTAGCACCAGACACCTaGTCCTCGCTGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLAPDT*SSLRSA
Trigger: CGCAGAGCGCAGCGAGGAGCAGGTGTCTGGTGCTAA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTAGCACCAGACACCTaGTCCTCGCTGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLAPDT*SSLRSA
Trigger: CGCAGAGCGCAGCGAGGAGCAGGTGTCTGGTGCTAA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTGACGACCATAGATACTaGTTCTCACTGCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NQLPLFRKYQHQACDEEGDDHRY*FSLPFQ
Trigger: TTGAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTC...ACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR GCA 90 bp GTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTTACCACCTTGATACTCTCTTCTaGATGAGCGTAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: VLKHSPSNVHSICSFTYHLDTLF*MSVSST
Trigger: GGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAG...GTGGTAAGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp ACCAGCATCAAGCCTGTGACGAGGAAGGTAGTTCTGAAGCACAGTCCGTCCAATATTCCCCAATTCTTCTaGACAGATATCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: TSIKPVTRKVVLKHSPSNIPQFF*TDINLD
Trigger: ATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAAT...ATTGGACGGACTGTGCTTCAGAACTACCTTCCTCGTCACAGGCTTGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTCTCTCTGGAGGATACTaGCATGGTGTTTTATCAAGT +
Preference number: 4 (lower is better)
Translates to: NQLPLFRKYQHQACDEEGLSGGY*HGVLSS
Trigger: ACTTGATAAAACACCATGGCAGTATCCTCCAGAGAG...ACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACATGGTTTCTACCTCCATaGCAGAAAACCCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTWFLPP*QKTQMH
Trigger: GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCA...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGTGTCTGCTAGGCTCTaGCTCAGGGATTTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: AAPFPMIRRGCLAFLITEVSARL*LRDFWS
Trigger: ACTCCAAAAATCCCTGAGGCAGAGCCTAGCAGACAC...TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCGCCACCTCTGGTACTaGACCTCTGACGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYRHLWY*TSDGQE
Trigger: CTCCTGTCCGTCAGAGGTGCAGTACCAGAGGTGGCG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451445.6
ENST00000628377.2
CDS-3UTR GCA 90 bp TTTCTTGATACTCTCTTCTGCATGAGCGTAAGCAGCACCTTTCCCGATGATAAGAGGAGGGCAACCAACTaGCTTAAACAACGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FLDTLFCMSVSSTFPDDKRRATN*LKQREG
Trigger: TCCTTCCCGTTGTTTAAGGCAGTTGGTTGCCCTCCT...CTTATCATCGGGAAAGGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR CCA 90 bp AACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTGGCGGGCAGAGAACTTaGTATATAATCTACAAGCTT +
Preference number: 4 (lower is better)
Translates to: NQLPLFRKYQHQACDEEGGGQRT*YIIYKL
Trigger: AAGCTTGTAGATTATATACCAAGTTCTCTGCCCGCC...ACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp GCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAACCTACACAGTATGGATaGTTGTCAGGGACAACACCC +
Preference number: 4 (lower is better)
Translates to: AAPFPMIRRGCLAFLITEPTQYG*LSGTTP
Trigger: GGGTGTTGTCCCTGACAACCATCCATACTGTGTAGG...TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAGCACAGATATCAACCTaGATAAACTTCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: KKGLFGIPNNRSRRAHSRAQIST*INFTSG
Trigger: GCCAGATGTGAAGTTTATCCAGGTTGATATCTGTGC...TCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp ACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAACCACCACTTGCTCTCTaGAGGATACTGCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: TTCSLEDTAMVFYQVPLKPPLAL*RILPWC
Trigger: ACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGG...TTTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp TGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATCCCAAATACCAACAGTATGATTaGCAAGTTGTACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: CPGLLSLATTAAAIANPKYQQYD*QVVPAD
Trigger: ATCTGCAGGTACAACTTGCCAATCATACTGTTGGTA...TTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCAGCACGCCACCTCTaGTACTGCACCTCTGACGGA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYAARHL*YCTSDG
Trigger: TCCGTCAGAGGTGCAGTACCAGAGGTGGCGTGCTGC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451445.6
ENST00000628377.2
CDS-3UTR TCA 90 bp GCATGTATGTTTCCTAGCAAAGTAACAGCGGGCTTTACATTATTCCCCAATTCTTGCGTTTTCAGGGCCTaGGCGATGACTTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: ACMFPSKVTAGFTLFPNSCVFRA*AMTLAP
Trigger: TGGTGCTAAAGTCATCGCTCAGGCCCTGAAAACGCA...AGAATTGGGGAATAATGTAAAGCCCGCTGTTACTTTGCTAGGAAACATACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCGCCCAAGGCATGGATaGGACCTGGGCCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYRPRHG*DLGQKQ
Trigger: TTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACGCCCAAGGCATGGATaGGACCTGGGCCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLRPRHG*DLGQKQ
Trigger: TTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp ATTGGCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATAACTTCACATCTGGCTaGTATCTTGGAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: IGKLYLQMVSTSMPENPNNFTSG*YLGGSP
Trigger: TGGACTGCCTCCAAGATATCAGCCAGATGTGAAGTT...ATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGAGCGGGTCAGCCAATaGAAATCCTGGGCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYERVSQ*KSWAFR
Trigger: ACGGAAGGCCCAGGATTTTCATTGGCTGACCCGCTC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGAGCGGGTCAGCCAATaGAAATCCTGGGCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLERVSQ*KSWAFR
Trigger: ACGGAAGGCCCAGGATTTTCATTGGCTGACCCGCTC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp ACAGCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAAGCGTTCCATGTACCTaGGGAAACTCCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TAGFTLFPNSSAQISTWISVPCT*GNSWKA
Trigger: AGCTTTCCAGGAGTTTCCTCAGGTACATGGAACGCT...TATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422591.5
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTCCTCGCTGCGCTCTaGGAAGTTACTGTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLLAAL*EVTVRH
Trigger: ATGCCGGACAGTAACTTCGCAGAGCGCAGCGAGGAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTCCTCGCTGCGCTCTaGGAAGTTACTGTCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLLAAL*EVTVRH
Trigger: ATGCCGGACAGTAACTTCGCAGAGCGCAGCGAGGAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAGGTAGTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTCTTGATACTCTCTTCTaGATGAGCGTAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: KVVLKHSPSNVHSICSFTLDTLF*MSVSST
Trigger: GGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAG...AGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAACTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTATGGTTTCTACCTCCATaGCAGAAAACCCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: STTCSLEDTAMVFYQVPLWFLPP*QKTQMH
Trigger: GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCA...TAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp ACCAACTGGCGTCTTTATTTACATATTAGAGCGGGTCAGCCAATGAAAATCCTGCAACCTGGATCTGGCTaGACCTACACAGTATGGATG +
Preference number: 4 (lower is better)
Translates to: TNWRLYLHIRAGQPMKILQPGSG*TYTVWM
Trigger: CATCCATACTGTGTAGGTGCAGCCAGATCCAGGTTG...CAGGATTTTCATTGGCTGACCCGCTCTAATATGTAAATAAAGACGCCAGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383779.8
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCTGCTGGGCAGCAATaGCGATTTCGGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYAAGQQ*RFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGCTGCTGGGCAGCAATaGCGATTTCGGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLAAGQQ*RFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp GTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCGCTCCCATTGTTTCTTaGTTTCTTTCAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: VVPADGFYLHARKPKCTVAPIVS*FLSEEP
Trigger: TGGTTCCTCTGAAAGAAACCAAGAAACAATGGGAGC...GACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422591.5
CDS-3UTR CCA 90 bp TGTCAACATAGCAAGCACCTGGACGACCATAGATACTGCTTCTCACTGCCTTTTAACATAGCAAGCACCTaGACGACCATAGATACTGCT +
Preference number: 4 (lower is better)
Translates to: CQHSKHLDDHRYCFSLPFNIAST*TTIDTA
Trigger: AGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTT...AAAAGGCAGTGAGAAGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp AAGGTAGTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTTGCACCTACACAGTATaGATGGTTGTCAGGGACAAC +
Preference number: 4 (lower is better)
Translates to: KVVLKHSPSNVHSICSFTCTYTV*MVVRDN
Trigger: GTTGTCCCTGACAACCATCCATACTGTGTAGGTGCA...AGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAACTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACAGCACAGATATCAACCTaGATAAACTTCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTAQIST*INFTSG
Trigger: GCCAGATGTGAAGTTTATCCAGGTTGATATCTGTGC...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AGCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGTTGTACCTGCAGATaGTTTCTACCTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: SSTFPDDKKGLFGIPNNRSCTCR*FLPPCQ
Trigger: CTGGCATGGAGGTAGAAACCATCTGCAGGTACAACT...TCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GATCCATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAACTCAAGACCACCAACTaGCGTCTTTATTTACATATT +
Preference number: 4 (lower is better)
Translates to: DPLPRASIFSHHGSCNSKLKTTN*RLYLHI
Trigger: AATATGTAAATAAAGACGCCAGTTGGTGGTCTTGAG...TTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLSSRCT*CLAAGQ
Trigger: CTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSSRCT*CLAAGQ
Trigger: CTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp CACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAGCTCCACCAATTTCTTaGTACTCTCTTCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: HHLLSGGYCHGVLSSSSKAPPIS*YSLLHE
Trigger: CTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGC...TTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTCCTTCCACACAGATaGTCCATTGCCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLLPHR*SIAQGF
Trigger: GAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTCCTTCCACACAGATaGTCCATTGCCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLLPHR*SIAQGF
Trigger: GAAGCCCTGGGCAATGGATCATCTGTGTGGAAGGAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACACTCCAAATGCAGTCATaGCTTGCTCATAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTLQMQS*LAHNVN
Trigger: ATTCACATTATGAGCAAGTCATGACTGCATTTGGAG...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATACACCTGCTCCTCGCTaGGCTCTGCGAAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYTPAPR*ALRSYC
Trigger: ACAGTAACTTCGCAGAGCGCAGCGAGGAGCAGGTGT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AGCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGACTGGGATGCCTACGATaGCAAATATGTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: SSTFPDDKKGLFGIPNNRLGCLR*QICTPH
Trigger: ATGTGGAGTACATATTTGGCATCGTAGGCATCCCAG...TCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp CACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAATTTCGGTCACTGGGATaGCTACGATGCCAAATATGT +
Preference number: 4 (lower is better)
Translates to: HHLLSGGYCHGVLSSSSKFRSLG*LRCQIC
Trigger: ACATATTTGGCATCGTAGGCATCCCAGTGACCGAAA...TTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TTTCTTGATACTCTCTTCTGCATGAGCGTAAGCAGCACCTTTCCCGATGATAAGTTTCGGTCACTGGGATaGCTACGATGCCAAATATGT +
Preference number: 4 (lower is better)
Translates to: FLDTLFCMSVSSTFPDDKFRSLG*LRCQIC
Trigger: ACATATTTGGCATCGTAGGCATCCCAGTGACCGAAA...CTTATCATCGGGAAAGGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTTGCGTTCATGTTTGCATTTaGCATACCGCCCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: SSGVCTKYPLPPNAVMTCVHVCI*HTAQGM
Trigger: CATGCCTTGGGCGGTATGGCAAATGCAAACATGAAC...GCAAGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGTCTGCCCAGCAGTTCATGTTTaGATTTGCCATACCGCCCAA +
Preference number: 4 (lower is better)
Translates to: CGLWLNHDVDKRRFSCVCPAVHV*ICHTAQ
Trigger: TTGGGCGGTATGGCAAATGCAAACATGAACTGCTGG...GCAGACACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp ACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTAGATACTGCTTCTCACTaGCTTTTCAATAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: TNSHCSESTSIKPVTRKVDTASH*LFNNKR
Trigger: CCTTTTGTTATTGAAAAGGCAGTGAGAAGCAGTATC...TACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR GCA 90 bp AGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTGAGTTTTCCACCACTTaGTCTCTGGAGGATACTGCC +
Preference number: 4 (lower is better)
Translates to: SSSGVCTKYPLPPNAVMTEFSTT*SLEDTA
Trigger: GGCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTC...AGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GCACAGATATCAACCTGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGAATGTCCATAGTATTTaGTCCTTCACTTACCACGAA +
Preference number: 4 (lower is better)
Translates to: AQISTWIWLHLHSMDGCQNVHSI*SFTYHE
Trigger: TTCGTGGTAAGTGAAGGAGCAAATACTATGGACATT...CTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTTGATATCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383779.8
CDS-3UTR GCA 90 bp AGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCATTGGAGGGACCACTaGAGTAGCATCTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: SCTCRWFLPPCQKTQMHCHWRDH*SSILKF
Trigger: AAATTTCAAGATGCTACTGCAGTGGTCCCTCCAATG...ACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAACCCTTTGCCTCCAAATaGAGTCATGACTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: AAPFPMIRRGCLAFLITEPFASK*SHDLLI
Trigger: TATGAGCAAGTCATGACTGCATTTGGAGGCAAAGGG...TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCGGCGATTTCGGTCACTaGGATGCCTACGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFGDFGH*DAYDAK
Trigger: TTTGGCATCGTAGGCATCCCAGTGACCGAAATCGCC...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATATACCGCCCAAGGCATaGATGAGACCTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYIPPKA*MRPGPE
Trigger: TTCTGGCCCAGGTCTCATCCATGCCTTGGGCGGTAT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp TTTCCTAGCAAAGTAACAGCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGTGCACCTACACAGTATaGATGGTTGTCAGGGACAAC +
Preference number: 4 (lower is better)
Translates to: FPSKVTAGFTLFPNSSAQCTYTV*MVVRDN
Trigger: GTTGTCCCTGACAACCATCCATACTGTGTAGGTGCA...CTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGTTACTTTGCTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACAGTTGTACCTGCAGATaGTTTCTACCTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: EFFWCLYKIPFASKCSHDSCTCR*FLPPCQ
Trigger: CTGGCATGGAGGTAGAAACCATCTGCAGGTACAACT...GTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACATACCAACAGTATGATTaGCAAGTTGTACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTYQQYD*QVVPAD
Trigger: ATCTGCAGGTACAACTTGCCAATCATACTGTTGGTA...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAGGTAGTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTCTTCCGTGTGGCTTGTaGCTCAATCATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: KVVLKHSPSNVHSICSFTLPCGL*LNHDVD
Trigger: ATCAACATCATGATTGAGCCACAAGCCACACGGAAG...AGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAACTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCGTTTTCAGGGCCTaGGCGATGACTTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLCVFRA*AMTLAP
Trigger: TGGTGCTAAAGTCATCGCTCAGGCCCTGAAAACGCA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTGCGTTTTCAGGGCCTaGGCGATGACTTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYCVFRA*AMTLAP
Trigger: TGGTGCTAAAGTCATCGCTCAGGCCCTGAAAACGCA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp GCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAAACTCACTACCAACAGTATaGTTGGCAAGTTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: AGFTLFPNSSAQISTWINSLPTV*LASCTC
Trigger: GCAGGTACAACTTGCCAATCATACTGTTGGTAGTGA...GTTTATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp TTCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTGACTTGCTCATAATGTaGATTTGGCAGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: FHHLLSGGYCHGVLSSSSDLLIM*IWQQTH
Trigger: ATGTGTTTGCTGCCAAATTCACATTATGAGCAAGTC...AGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATGGCAGTTTATATTGCTCCACCAATTTCTTGATACTCTCTTCTGCATGAGCTACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATT +
Preference number: 4 (lower is better)
Translates to: KWQFILLHQFLDTLFCMSYLMPS*WAAMAI
Trigger: AATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTA...GCTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGCAATATAAACTGCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTGTTCATGTTTGCATTTaGCATACCGCCCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: SSSGVCTKYPLPPNAVMTVHVCI*HTAQGM
Trigger: CATGCCTTGGGCGGTATGGCAAATGCAAACATGAAC...AGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TTTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCAGTTCATGTTTGCATTTaGCATACCGCCCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: FGVLLVFVQNTLCLQMQSVHVCI*HTAQGM
Trigger: CATGCCTTGGGCGGTATGGCAAATGCAAACATGAAC...TGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTATTACATCAGCAAATTaGAAAGCCCTGGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPITSAN*KALDLA
Trigger: AGCCAGATCCAGGGCTTTGCAATTTGCTGATGTAAT...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGCCACCACGGCAGCTaGAATAGCAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSHHGS*NSKSQT
Trigger: GGTTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAGCCACCACGGCAGCTaGAATAGCAAATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLSHHGS*NSKSQT
Trigger: GGTTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGGCGATTTCGGTCACTaGGATGCCTACGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYGDFGH*DAYDAK
Trigger: TTTGGCATCGTAGGCATCCCAGTGACCGAAATCGCC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGGCGATTTCGGTCACTaGGATGCCTACGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLGDFGH*DAYDAK
Trigger: TTTGGCATCGTAGGCATCCCAGTGACCGAAATCGCC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTGATGCCTAGCTGCTaGGCAGCAATGGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLMPSC*AAMAIS
Trigger: CGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTGATGCCTAGCTGCTaGGCAGCAATGGCGATTTCG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLMPSC*AAMAIS
Trigger: CGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGCTTCTATGCTGCTTaGGCGGGCAGAGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSFYAA*AGRELG
Trigger: ACCAAGTTCTCTGCCCGCCCAAGCAGCATAGAAGCT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CCA 90 bp ACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAAGGGGTGGGCAAAAATaGCAGTTTATATTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TTCSLEDTAMVFYQVPLKRGGQK*QFILLH
Trigger: GTGGAGCAATATAAACTGCCATTTTTGCCCACCCCT...TTTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp TGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGAGGGGTGGGCAAAAATaGCAGTTTATATTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: WSSSGVCTKYPLPPNAVMRGGQK*QFILLH
Trigger: GTGGAGCAATATAAACTGCCATTTTTGCCCACCCCT...CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATGGCAGTTTATATTGCTCCACCAATTTCTTGATACTCTCTTCTGCATGAGCCCTACACAGTATGGATaGTTGTCAGGGACAACACCC +
Preference number: 4 (lower is better)
Translates to: KWQFILLHQFLDTLFCMSPTQYG*LSGTTP
Trigger: GGGTGTTGTCCCTGACAACCATCCATACTGTGTAGG...GCTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGCAATATAAACTGCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp ATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAAACTTCACATCTGGCCTACACAGTATGGATaGTTGTCAGGGACAACACCC +
Preference number: 4 (lower is better)
Translates to: IIPQFFCTDINLDKLHIWPTQYG*LSGTTP
Trigger: GGGTGTTGTCCCTGACAACCATCCATACTGTGTAGG...CCAGATGTGAAGTTTATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGCAAAGCCCTGGATCTaGCTGCACCTACACAGTATG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLAKPWI*LHLHSM
Trigger: CATACTGTGTAGGTGCAGCCAGATCCAGGGCTTTGC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCAAAGCCCTGGATCTaGCTGCACCTACACAGTATG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYAKPWI*LHLHSM
Trigger: CATACTGTGTAGGTGCAGCCAGATCCAGGGCTTTGC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCCAAATTGCAAAGCCCTaGATCTGGCTGCACCTACAC +
Preference number: 4 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFQIAKP*IWLHLH
Trigger: GTGTAGGTGCAGCCAGATCCAGGGCTTTGCAATTTG...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp GCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGATAAACTTCACATCTaGCTGATATCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AAPFPMIRRGCLAFLITEDKLHI*LISWRQ
Trigger: CTGCCTCCAAGATATCAGCCAGATGTGAAGTTTATC...TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCCACCACTTGCTCTCTaGAGGATACTGCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYPPLAL*RILPWC
Trigger: ACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACCACCACTTGCTCTCTaGAGGATACTGCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLPPLAL*RILPWC
Trigger: ACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGGCAGCAAACACATTaGAGGGACCACTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLWQQTH*RDHCSS
Trigger: GCTACTGCAGTGGTCCCTCCAATGTGTTTGCTGCCA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTGGCAGCAAACACATTaGAGGGACCACTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYWQQTH*RDHCSS
Trigger: GCTACTGCAGTGGTCCCTCCAATGTGTTTGCTGCCA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp TACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAGCTGCTTAGTGACAGCATGTGCTCCACCAATTTCTTaGTACTCTCTTCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: YCHGVLSSSSKSCLVTACAPPIS*YSLLHE
Trigger: CTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGC...ACATGCTGTCACTAAGCAGCTTTTAGAGGAACTTGATAAAACACCATGGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR TCA 90 bp TGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAGCTGCTCTCCAAATGCAGTCATaGCTTGCTCATAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: CSLEDTAMVFYQVPLKAALQMQS*LAHNVN
Trigger: ATTCACATTATGAGCAAGTCATGACTGCATTTGGAG...AGCAGCTTTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATCTGGGATGCCTACGATaGCAAATATGTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: LEFFWCLYKIPFASKCSHLGCLR*QICTPH
Trigger: ATGTGGAGTACATATTTGGCATCGTAGGCATCCCAG...ATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLYLMPS*WAAMAI
Trigger: AATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYYLMPS*WAAMAI
Trigger: AATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp GCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAAACGACGACCATAGATACTaGTTCTCACTGCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: AGFTLFPNSSAQISTWINDDHRY*FSLPFQ
Trigger: TTGAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTC...GTTTATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR GCA 90 bp TGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGATTACATCAGCAAATTaGAAAGCCCTGGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: WSSSGVCTKYPLPPNAVMITSAN*KALDLA
Trigger: AGCCAGATCCAGGGCTTTGCAATTTGCTGATGTAAT...CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGAGTTTTCCACCACTTaGTCTCTGGAGGATACTGCC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLEFSTT*SLEDTA
Trigger: GGCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGAGTTTTCCACCACTTaGTCTCTGGAGGATACTGCC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYEFSTT*SLEDTA
Trigger: GGCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR GCA 90 bp TGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGCATTGGAGGGACCACTaGAGTAGCATCTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: WSSSGVCTKYPLPPNAVMHWRDH*SSILKF
Trigger: AAATTTCAAGATGCTACTGCAGTGGTCCCTCCAATG...CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATCCCTTTGCCTCCAAATaGAGTCATGACTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: LEFFWCLYKIPFASKCSHPFASK*SHDLLI
Trigger: TATGAGCAAGTCATGACTGCATTTGGAGGCAAAGGG...ATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGTGTCTGCTAGGCTCTaGCTCAGGGATTTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYVSARL*LRDFWS
Trigger: ACTCCAAAAATCCCTGAGGCAGAGCCTAGCAGACAC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGTGTCTGCTAGGCTCTaGCTCAGGGATTTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLVSARL*LRDFWS
Trigger: ACTCCAAAAATCCCTGAGGCAGAGCCTAGCAGACAC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACCTACACAGTATGGATaGTTGTCAGGGACAACACCC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLPTQYG*LSGTTP
Trigger: GGGTGTTGTCCCTGACAACCATCCATACTGTGTAGG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCCTACACAGTATGGATaGTTGTCAGGGACAACACCC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYPTQYG*LSGTTP
Trigger: GGGTGTTGTCCCTGACAACCATCCATACTGTGTAGG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCAAATTGCAAAGCCCTaGATCTGGCTGCACCTACAC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYQIAKP*IWLHLH
Trigger: GTGTAGGTGCAGCCAGATCCAGGGCTTTGCAATTTG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTACAAGCTTCAACCTaGGGAAACTCCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLQAST*GNSWKA
Trigger: AGCTTTCCAGGAGTTTCCTCAGGTTGAAGCTTGTAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321169.10
ENST00000456194.6
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTACAAGCTTCAACCTaGGGAAACTCCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLQAST*GNSWKA
Trigger: AGCTTTCCAGGAGTTTCCTCAGGTTGAAGCTTGTAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321169.10
ENST00000456194.6
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLHANRR*HAAFHV
Trigger: TACATGGAACGCTGCATGTCACCTCCTATTAGCATG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYHANRR*HAAFHV
Trigger: TACATGGAACGCTGCATGTCACCTCCTATTAGCATG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAACTTCACATCTGGCTaGTATCTTGGAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLNFTSG*YLGGSP
Trigger: TGGACTGCCTCCAAGATATCAGCCAGATGTGAAGTT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp ACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTAAAACTCCAAATGCAGTCATaGCTTGCTCATAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: TTCSLEDTAMVFYQVPLKLQMQS*LAHNVN
Trigger: ATTCACATTATGAGCAAGTCATGACTGCATTTGGAG...TTTTAGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGTTCATGTTTGCATTTaGCATACCGCCCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLVHVCI*HTAQGM
Trigger: CATGCCTTGGGCGGTATGGCAAATGCAAACATGAAC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGTTCATGTTTGCATTTaGCATACCGCCCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYVHVCI*HTAQGM
Trigger: CATGCCTTGGGCGGTATGGCAAATGCAAACATGAAC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACCAGCAGTTCATGTTTaGATTTGCCATACCGCCCAA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLPAVHV*ICHTAQ
Trigger: TTGGGCGGTATGGCAAATGCAAACATGAACTGCTGG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCCAGCAGTTCATGTTTaGATTTGCCATACCGCCCAA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYPAVHV*ICHTAQ
Trigger: TTGGGCGGTATGGCAAATGCAAACATGAACTGCTGG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp ATTGGCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATAAGGTTCACAAAATCTaGTGGTATGTCAACATAGCA +
Preference number: 4 (lower is better)
Translates to: IGKLYLQMVSTSMPENPNKVHKI*WYVNIA
Trigger: TGCTATGTTGACATACCAGCAGATTTTGTGAACCTT...ATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTTGATACTCTCTTCTaGATGAGCGTAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLDTLF*MSVSST
Trigger: GGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTTGATACTCTCTTCTaGATGAGCGTAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLDTLF*MSVSST
Trigger: GGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp TCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTTGCATTCCCCAATTCTTCTaGACAGATATCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: SSGVCTKYPLPPNAVMTCIPQFF*TDINLD
Trigger: ATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAAT...GCAAGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTCTCTCTGGAGGATACTaGCATGGTGTTTTATCAAGT +
Preference number: 4 (lower is better)
Translates to: SSSGVCTKYPLPPNAVMTLSGGY*HGVLSS
Trigger: ACTTGATAAAACACCATGGCAGTATCCTCCAGAGAG...AGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AGCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAATGTCCATAGTATTTaGTCCTTCACTTACCACGAA +
Preference number: 4 (lower is better)
Translates to: SSTFPDDKKGLFGIPNNRNVHSI*SFTYHE
Trigger: TTCGTGGTAAGTGAAGGAGCAAATACTATGGACATT...TCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGCCAGAAAACCCAAATaGACTGTCTCCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLARKPK*TVSFHT
Trigger: TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCCAGAAAACCCAAATaGACTGTCTCCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYARKPK*TVSFHT
Trigger: TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATGGCAGTTTATATTGCTCCACCAATTTCTTGATACTCTCTTCTGCATGAGCTTGGCAAGTTGTACCTaGAGATGGTTTCTACCTCCA +
Preference number: 4 (lower is better)
Translates to: KWQFILLHQFLDTLFCMSLASCT*RWFLPP
Trigger: TGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAA...GCTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGCAATATAAACTGCCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp TTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATCATTGGAGGGACCACTaGAGTAGCATCTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: LEFFWCLYKIPFASKCSHHWRDH*SSILKF
Trigger: AAATTTCAAGATGCTACTGCAGTGGTCCCTCCAATG...ATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCACAAGCAAGGGCCTaGTTGTCAGATATCCAATCG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLSQARA*LSDIQS
Trigger: CGATTGGATATCTGACAAGCAGGCCCTTGCTTGTGA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456194.6
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACAGATATCAACCGCTTaGTCATTCCTCATCCCGATG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLQISTA*SFLIPM
Trigger: CATCGGGATGAGGAATGAGCAAGCGGTTGATATCTG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435217.6
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGATACTGCTTCTCACTaGCTGAGGAAACTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYDTASH*LRKLLE
Trigger: TTCCAGGAGTTTCCTCAGGCAGTGAGAAGCAGTATC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457447.6
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGACGACCATAGATACTaGTTCTCACTGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYDDHRY*FSLPEE
Trigger: TTCCTCAGGCAGTGAGAAGCAGTATCTATGGTCGTC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457447.6
CDS-3UTR GCA 90 bp TTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTACATATTAGGACTAGCAGGAGATTaGTGCCTATGCAAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQERENSRPPTGVFIYILGLAGD*CLCKAG
Trigger: ACCTGCTTTGCATAGGCAGCAATCTCCTGCTAGTCC...TAATATGTAAATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR CCA 90 bp GCATGTATGTTTCCTAGCAAAGTAACAGCGGGCTTTACATTATTCCCCAATTCTGGCGGGCAGAGAACTTaGTATATAATCTACAAGCTT +
Preference number: 4 (lower is better)
Translates to: ACMFPSKVTAGFTLFPNSGGQRT*YIIYKL
Trigger: AAGCTTGTAGATTATATACCAAGTTCTCTGCCCGCC...AGAATTGGGGAATAATGTAAAGCCCGCTGTTACTTTGCTAGGAAACATACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATGGCAGTTTATATTGCTCCACCAATTTCTTGATACTCTCTTCTGCATGAGCAACATAGCAAGCACCTaGACGACCATAGATACTGCT +
Preference number: 4 (lower is better)
Translates to: KWQFILLHQFLDTLFCMSNIAST*TTIDTA
Trigger: AGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTT...GCTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGCAATATAAACTGCCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTGCACCTACACAGTATaGATGGTTGTCAGGGACAAC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYCTYTV*MVVRDN
Trigger: GTTGTCCCTGACAACCATCCATACTGTGTAGGTGCA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCACCTACACAGTATaGATGGTTGTCAGGGACAAC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLCTYTV*MVVRDN
Trigger: GTTGTCCCTGACAACCATCCATACTGTGTAGGTGCA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAGTTGTACCTGCAGATaGTTTCTACCTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLSCTCR*FLPPCQ
Trigger: CTGGCATGGAGGTAGAAACCATCTGCAGGTACAACT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGTTGTACCTGCAGATaGTTTCTACCTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSCTCR*FLPPCQ
Trigger: CTGGCATGGAGGTAGAAACCATCTGCAGGTACAACT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCATATCAACCTGGATCTaGCTGCACCTACACAGTATG +
Preference number: 4 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFISTWI*LHLHSM
Trigger: CATACTGTGTAGGTGCAGCCAGATCCAGGTTGATAT...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383779.8
CDS-3UTR TCA 90 bp TACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAGCTGCTTAGTGACAGCATGTGAATTCACATTCACCTaGAGGTTCACAAAATCTGCT +
Preference number: 4 (lower is better)
Translates to: YCHGVLSSSSKSCLVTACEFTFT*RFTKSA
Trigger: AGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTC...ACATGCTGTCACTAAGCAGCTTTTAGAGGAACTTGATAAAACACCATGGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGCTCCACCAATTTCTTaGTACTCTCTTCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLAPPIS*YSLLHE
Trigger: CTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCTCCACCAATTTCTTaGTACTCTCTTCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYAPPIS*YSLLHE
Trigger: CTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTCACTACCAACAGTATaGTTGGCAAGTTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSLPTV*LASCTC
Trigger: GCAGGTACAACTTGCCAATCATACTGTTGGTAGTGA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCACTACCAACAGTATaGTTGGCAAGTTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLSLPTV*LASCTC
Trigger: GCAGGTACAACTTGCCAATCATACTGTTGGTAGTGA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTGGGATGCCTACGATaGCAAATATGTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLGCLR*QICTPH
Trigger: ATGTGGAGTACATATTTGGCATCGTAGGCATCCCAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTGGGATGCCTACGATaGCAAATATGTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLGCLR*QICTPH
Trigger: ATGTGGAGTACATATTTGGCATCGTAGGCATCCCAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTCGGTCACTGGGATaGCTACGATGCCAAATATGT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLFRSLG*LRCQIC
Trigger: ACATATTTGGCATCGTAGGCATCCCAGTGACCGAAA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTTCGGTCACTGGGATaGCTACGATGCCAAATATGT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYFRSLG*LRCQIC
Trigger: ACATATTTGGCATCGTAGGCATCCCAGTGACCGAAA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp TTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGAAGGTTCACAAAATCTaGTGGTATGTCAACATAGCA +
Preference number: 4 (lower is better)
Translates to: FRVACGSIMMLIREGLVVKVHKI*WYVNIA
Trigger: TGCTATGTTGACATACCAGCAGATTTTGTGAACCTT...CACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACACGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR GCA 90 bp ACAGCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAAATGTCCATAGTATTTaGTCCTTCACTTACCACGAA +
Preference number: 4 (lower is better)
Translates to: TAGFTLFPNSSAQISTWINVHSI*SFTYHE
Trigger: TTCGTGGTAAGTGAAGGAGCAAATACTATGGACATT...TATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp ACCTTGGTAAATTCCATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTAGCCAGAAAACCCAAATaGACTGTCTCCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: TLVNSIVIHYQQYDWQVVARKPK*TVSFHT
Trigger: TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGC...TACAACTTGCCAATCATACTGTTGGTAGTGAATAACAATGGAATTTACCAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTGGTTTCTACCTCCATaGCAGAAAACCCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYWFLPP*QKTQMH
Trigger: GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGGTTTCTACCTCCATaGCAGAAAACCCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLWFLPP*QKTQMH
Trigger: GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTGGCAAGTTGTACCTaGAGATGGTTTCTACCTCCA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLASCT*RWFLPP
Trigger: TGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTGGCAAGTTGTACCTaGAGATGGTTTCTACCTCCA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLASCT*RWFLPP
Trigger: TGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCCCTTTGCCTCCAAATaGAGTCATGACTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYPFASK*SHDLLI
Trigger: TATGAGCAAGTCATGACTGCATTTGGAGGCAAAGGG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACCCTTTGCCTCCAAATaGAGTCATGACTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLPFASK*SHDLLI
Trigger: TATGAGCAAGTCATGACTGCATTTGGAGGCAAAGGG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAACATAGCAAGCACCTaGACGACCATAGATACTGCT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYNIAST*TTIDTA
Trigger: AGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAACATAGCAAGCACCTaGACGACCATAGATACTGCT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLNIAST*TTIDTA
Trigger: AGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp TTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGTTCACAAAATCTGCTaGTATGTCAACATAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LEFFWCLYKIPFASKCSHVHKIC*YVNIAS
Trigger: GCTTGCTATGTTGACATACCAGCAGATTTTGTGAAC...ATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp TTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACCGTTCACAAAATCTGCTaGTATGTCAACATAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LFTTNSMIGKLYLQMVSTVHKIC*YVNIAS
Trigger: GCTTGCTATGTTGACATACCAGCAGATTTTGTGAAC...GGTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAGGGGTGGGCAAAAATaGCAGTTTATATTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLRGGQK*QFILLH
Trigger: GTGGAGCAATATAAACTGCCATTTTTGCCCACCCCT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATGGCAGTTTATATTGCTCCACCAATTTCTTGATACTCTCTTCTGCATGAGCGATAAACTTCACATCTaGCTGATATCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KWQFILLHQFLDTLFCMSDKLHI*LISWRQ
Trigger: CTGCCTCCAAGATATCAGCCAGATGTGAAGTTTATC...GCTCATGCAGAAGAGAGTATCAAGAAATTGGTGGAGCAATATAAACTGCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTTCCGTGTGGCTTGTaGCTCAATCATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLPCGL*LNHDVD
Trigger: ATCAACATCATGATTGAGCCACAAGCCACACGGAAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTTCCGTGTGGCTTGTaGCTCAATCATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLPCGL*LNHDVD
Trigger: ATCAACATCATGATTGAGCCACAAGCCACACGGAAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp GCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAAACCTCAAGACCACCAACTaGCGTCTTTATTTACATATT +
Preference number: 4 (lower is better)
Translates to: AGFTLFPNSSAQISTWINLKTTN*RLYLHI
Trigger: AATATGTAAATAAAGACGCCAGTTGGTGGTCTTGAG...GTTTATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR TCA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCGACTTGCTCATAATGTaGATTTGGCAGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFDLLIM*IWQQTH
Trigger: ATGTGTTTGCTGCCAAATTCACATTATGAGCAAGTC...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR GCA 90 bp GTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACGATACTGCTTCTCACTaGCTTTTCAATAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: VIHYQQYDWQVVPADGFYDTASH*LFNNKR
Trigger: CCTTTTGTTATTGAAAAGGCAGTGAGAAGCAGTATC...GTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGACGACCATAGATACTaGTTCTCACTGCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYDDHRY*FSLPFQ
Trigger: TTGAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGACGACCATAGATACTaGTTCTCACTGCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLDDHRY*FSLPFQ
Trigger: TTGAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAATTACATCAGCAAATTaGAAAGCCCTGGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLITSAN*KALDLA
Trigger: AGCCAGATCCAGGGCTTTGCAATTTGCTGATGTAAT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATATTACATCAGCAAATTaGAAAGCCCTGGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYITSAN*KALDLA
Trigger: AGCCAGATCCAGGGCTTTGCAATTTGCTGATGTAAT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTCTCTGGAGGATACTaGCATGGTGTTTTATCAAGT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLSGGY*HGVLSS
Trigger: ACTTGATAAAACACCATGGCAGTATCCTCCAGAGAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTCTCTGGAGGATACTaGCATGGTGTTTTATCAAGT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLSGGY*HGVLSS
Trigger: ACTTGATAAAACACCATGGCAGTATCCTCCAGAGAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCATTGGAGGGACCACTaGAGTAGCATCTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYHWRDH*SSILKF
Trigger: AAATTTCAAGATGCTACTGCAGTGGTCCCTCCAATG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACATTGGAGGGACCACTaGAGTAGCATCTTGAAATTT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLHWRDH*SSILKF
Trigger: AAATTTCAAGATGCTACTGCAGTGGTCCCTCCAATG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATATTCCCCAATTCTTCTaGACAGATATCAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYIPQFF*TDINRL
Trigger: CAAGCGGTTGATATCTGTGCAGAAGAATTGGGGAAT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435217.6
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGCTCCCATTGTTTCTTaGTTTCTTTCAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLAPIVS*FLSEEP
Trigger: TGGTTCCTCTGAAAGAAACCAAGAAACAATGGGAGC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321169.10
ENST00000456194.6
ENST00000457447.6
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCTCCCATTGTTTCTTaGTTTCTTTCAGAGGAACCA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYAPIVS*FLSEEP
Trigger: TGGTTCCTCTGAAAGAAACCAAGAAACAATGGGAGC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321169.10
ENST00000456194.6
ENST00000457447.6
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGGCGGGCAGAGAACTTaGTATATAATCTACAAGCTT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYGGQRT*YIIYKL
Trigger: AAGCTTGTAGATTATATACCAAGTTCTCTGCCCGCC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGGCGGGCAGAGAACTTaGTATATAATCTACAAGCTT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLGGQRT*YIIYKL
Trigger: AAGCTTGTAGATTATATACCAAGTTCTCTGCCCGCC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGATAAACTTCACATCTaGCTGATATCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYDKLHI*LISWRQ
Trigger: CTGCCTCCAAGATATCAGCCAGATGTGAAGTTTATC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGATAAACTTCACATCTaGCTGATATCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLDKLHI*LISWRQ
Trigger: CTGCCTCCAAGATATCAGCCAGATGTGAAGTTTATC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGCACAGATATCAACCTaGATAAACTTCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLAQIST*INFTSG
Trigger: GCCAGATGTGAAGTTTATCCAGGTTGATATCTGTGC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCACAGATATCAACCTaGATAAACTTCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYAQIST*INFTSG
Trigger: GCCAGATGTGAAGTTTATCCAGGTTGATATCTGTGC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGAATTCACATTCACCTaGAGGTTCACAAAATCTGCT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYEFTFT*RFTKSA
Trigger: AGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGAATTCACATTCACCTaGAGGTTCACAAAATCTGCT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLEFTFT*RFTKSA
Trigger: AGCAGATTTTGTGAACCTTCAGGTGAATGTGAATTC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGACTTGCTCATAATGTaGATTTGGCAGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYDLLIM*IWQQTH
Trigger: ATGTGTTTGCTGCCAAATTCACATTATGAGCAAGTC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGACTTGCTCATAATGTaGATTTGGCAGCAAACACAT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLDLLIM*IWQQTH
Trigger: ATGTGTTTGCTGCCAAATTCACATTATGAGCAAGTC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTCCAAATGCAGTCATaGCTTGCTCATAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLQMQS*LAHNVN
Trigger: ATTCACATTATGAGCAAGTCATGACTGCATTTGGAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR TCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTCCAAATGCAGTCATaGCTTGCTCATAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLQMQS*LAHNVN
Trigger: ATTCACATTATGAGCAAGTCATGACTGCATTTGGAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATATTCCCCAATTCTTCTaGACAGATATCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYIPQFF*TDINLD
Trigger: ATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAAT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAATTCCCCAATTCTTCTaGACAGATATCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLIPQFF*TDINLD
Trigger: ATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAAT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTAGAAGCTAGTTCCTaGTTAGTGACAGCATGTATG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLEASS*LVTACM
Trigger: CATACATGCTGTCACTAAGCAGGAACTAGCTTCTAA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457447.6
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGTTCACAAAATCTGCTaGTATGTCAACATAGCAAGC +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLVHKIC*YVNIAS
Trigger: GCTTGCTATGTTGACATACCAGCAGATTTTGTGAAC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGTTCACAAAATCTGCTaGTATGTCAACATAGCAAGC +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYVHKIC*YVNIAS
Trigger: GCTTGCTATGTTGACATACCAGCAGATTTTGTGAAC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTACCAACAGTATGATTaGCAAGTTGTACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYYQQYD*QVVPAD
Trigger: ATCTGCAGGTACAACTTGCCAATCATACTGTTGGTA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATACCAACAGTATGATTaGCAAGTTGTACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLYQQYD*QVVPAD
Trigger: ATCTGCAGGTACAACTTGCCAATCATACTGTTGGTA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGATACTGCTTCTCACTaGCTTTTCAATAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYDTASH*LFNNKR
Trigger: CCTTTTGTTATTGAAAAGGCAGTGAGAAGCAGTATC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAAGGTTCACAAAATCTaGTGGTATGTCAACATAGCA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLKVHKI*WYVNIA
Trigger: TGCTATGTTGACATACCAGCAGATTTTGTGAACCTT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAATGTCCATAGTATTTaGTCCTTCACTTACCACGAA +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLNVHSI*SFTYHE
Trigger: TTCGTGGTAAGTGAAGGAGCAAATACTATGGACATT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR GCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAATGTCCATAGTATTTaGTCCTTCACTTACCACGAA +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYNVHSI*SFTYHE
Trigger: TTCGTGGTAAGTGAAGGAGCAAATACTATGGACATT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTCAAGACCACCAACTaGCGTCTTTATTTACATATT +
Preference number: 4 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLKTTN*RLYLHI
Trigger: AATATGTAAATAAAGACGCCAGTTGGTGGTCTTGAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CCA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTCAAGACCACCAACTaGCGTCTTTATTTACATATT +
Preference number: 4 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLKTTN*RLYLHI
Trigger: AATATGTAAATAAAGACGCCAGTTGGTGGTCTTGAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS GCA 90 bp CGCGCGCCAGAATGCCAGAGGGAGGCGGGACTAGCAGGAGATTGCTaGCTATGCAAAGCAGGTAAGAAGCCGAACTCTGAGGCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: RAPECQREAGLAGDC*LCKAGKKPNSEASR
Trigger: GCGAGAGGCCTCAGAGTTCGGCTTCTTACCTGCTTTGCATAGGCAGCAATCTCCTGCTAGTCCCGCCTCCCTCTGGCATTCTGGCGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS TCA 90 bp GGCAAACGCGAAATCGGCAGCACGCCACCTCTGGTACTGCACCTCTaGCGGACAGGAGGGCAACCAACTGCCTTAAACAACGGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GKREIGSTPPLVLHL*RTGGQPTALNNGKE
Trigger: TTCCTTCCCGTTGTTTAAGGCAGTTGGTTGCCCTCCTGTCCGTCAGAGGTGCAGTACCAGAGGTGGCGTGCTGCCGATTTCGCGTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS GCA 90 bp ATTCGCGCGCCAGAATGCCAGAGGGAGGCGGGACTAGCAGGAGATTaGTGCCTATGCAAAGCAGGTAAGAAGCCGAACTCTGAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: IRAPECQREAGLAGD*CLCKAGKKPNSEAS
Trigger: AGAGGCCTCAGAGTTCGGCTTCTTACCTGCTTTGCATAGGCAGCAATCTCCTGCTAGTCCCGCCTCCCTCTGGCATTCTGGCGCGCGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS GCA 90 bp CCAGAATGCCAGAGGGAGGCGGGACTAGCAGGAGATTGCTGCCTATaGAAAGCAGGTAAGAAGCCGAACTCTGAGGCCTCTCGCCATTGT +
Preference number: 5 (lower is better)
Translates to: PECQREAGLAGDCCL*KAGKKPNSEASRHC
Trigger: ACAATGGCGAGAGGCCTCAGAGTTCGGCTTCTTACCTGCTTTGCATAGGCAGCAATCTCCTGCTAGTCCCGCCTCCCTCTGGCATTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS CCA 90 bp GCCGCTTGCTCATTCCTCATCCCGATGTACTTGATGCCTAGCTGCTaGGCAGCAATGGCGATTTCGGTCACTGGGATGCCTACGATGCCA +
Preference number: 5 (lower is better)
Translates to: AACSFLIPMYLMPSC*AAMAISVTGMPTMP
Trigger: TGGCATCGTAGGCATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000421993.5
ENST00000422591.5
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000469454.1
ENST00000628377.2
CDS GCA 90 bp CTGAGCGATGACTTTAGCACCAGACACCTGCTCCTCGCTGCGCTCTaGGAAGTTACTGTCCGGCATCTTCCACCGAAAAGCTCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: LSDDFSTRHLLLAAL*EVTVRHLPPKSSKH
Trigger: GTGCTTAGAGCTTTTCGGTGGAAGATGCCGGACAGTAACTTCGCAGAGCGCAGCGAGGAGCAGGTGTCTGGTGCTAAAGTCATCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000414979.1
ENST00000421993.5
ENST00000422591.5
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000472857.1
ENST00000628377.2
CDS GCA 90 bp CAAGCCGCTTGCTCATTCCTCATCCCGATGTACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATTTCGGTCACTGGGATGCCTACGATG +
Preference number: 5 (lower is better)
Translates to: QAACSFLIPMYLMPS*WAAMAISVTGMPTM
Trigger: CATCGTAGGCATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000421993.5
ENST00000422591.5
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000469454.1
ENST00000628377.2
CDS GCA 90 bp CTCACCGCTTGCTCATTCCTCATCCCGATGTACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATTTCGGTCACTGGGATGCCTACGATG +
Preference number: 5 (lower is better)
Translates to: LTACSFLIPMYLMPS*WAAMAISVTGMPTM
Trigger: CATCGTAGGCATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472857.1
CDS GCA 90 bp GCCACCTCTGGTACTGCACCTCTGACGGACAGGAGGGCAACCAACTaGCTTAAACAACGGGAAGGAAGAGGCGGTCTAAATTCGTCCACT +
Preference number: 5 (lower is better)
Translates to: ATSGTAPLTDRRATN*LKQREGRGGLNSST
Trigger: AGTGGACGAATTTAGACCGCCTCTTCCTTCCCGTTGTTTAAGGCAGTTGGTTGCCCTCCTGTCCGTCAGAGGTGCAGTACCAGAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS CCA 90 bp AAGGGCCAGCAGTTCATGTTTGCATTTGCCATACCGCCCAAGGCATaGATGAGACCTGGGCCAGAAACAACAAGGCAGACTCCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: KGQQFMFAFAIPPKA*MRPGPETTRQTPGL
Trigger: CAGGCCAGGAGTCTGCCTTGTTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCGGTATGGCAAATGCAAACATGAACTGCTGGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321169.10
ENST00000422591.5
ENST00000457447.6
CDS CCA 90 bp ACCGCTTGCTCATTCCTCATCCCGATGTACTTGATGCCTAGCTGCTaGGCAGCAATGGCGATTTCGGTCACTGGGATGCCTACGATGCCA +
Preference number: 5 (lower is better)
Translates to: TACSFLIPMYLMPSC*AAMAISVTGMPTMP
Trigger: TGGCATCGTAGGCATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414979.1
ENST00000435217.6
ENST00000472857.1
CDS TCA 90 bp AGGCAGCATAACAAGCCGCTTGCTCATTCCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: RQHNKPLAHSSSRCT*CLAAGQQWRFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGCTTGTTATGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000421993.5
ENST00000422591.5
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000469454.1
ENST00000628377.2
CDS TCA 90 bp CTGAGTCCATACTCACCGCTTGCTCATTCCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: LSPYSPLAHSSSRCT*CLAAGQQWRFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTGAGTATGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472857.1
CDS TCA 90 bp CGGGAAGGAAGAGGCGGTCTAAATTCGTCCACTTCCCGGGAGAGGTaGGAATGTAAACACGCGCGTTCTCCAATCAGAACTGCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: REGRGGLNSSTSRER*ECKHARSPIRTALS
Trigger: AGAGAGCGCAGTTCTGATTGGAGAACGCGCGTGTTTACATTCTCACCTCTCCCGGGAAGTGGACGAATTTAGACCGCCTCTTCCTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS GCA 90 bp GCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGGATGCCTACGATaGCAAATATGTACTCCACATCTTGCGTTTTCAGGGCCTGAGCGA +
Preference number: 5 (lower is better)
Translates to: AAGQQWRFRSLGCLR*QICTPHLAFSGPER
Trigger: TCGCTCAGGCCCTGAAAACGCAAGATGTGGAGTACATATTTGGCATCGTAGGCATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000414979.1
ENST00000421993.5
ENST00000422591.5
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000472857.1
ENST00000628377.2
CDS GCA 90 bp TCAACCGCTTGCTCATTCCTCATCCCGATGTACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATTTCGGTCACTGGGATGCCTACGATG +
Preference number: 5 (lower is better)
Translates to: STACSFLIPMYLMPS*WAAMAISVTGMPTM
Trigger: CATCGTAGGCATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414979.1
ENST00000435217.6
CDS TCA 90 bp CTGCACAGATATCAACCGCTTGCTCATTCCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: LHRYQPLAHSSSRCT*CLAAGQQWRFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGATATCTGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435217.6
CDS CCA 90 bp TTCAACCAGCAGTTCATGTTTGCATTTGCCATACCGCCCAAGGCATaGATGAGACCTGGGCCAGAAACAACAAGGCAGACTCCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: FNQQFMFAFAIPPKA*MRPGPETTRQTPGL
Trigger: CAGGCCAGGAGTCTGCCTTGTTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCGGTATGGCAAATGCAAACATGAACTGCTGGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS CCA 90 bp ATGTACCAGCAGTTCATGTTTGCATTTGCCATACCGCCCAAGGCATaGATGAGACCTGGGCCAGAAACAACAAGGCAGACTCCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: MYQQFMFAFAIPPKA*MRPGPETTRQTPGL
Trigger: CAGGCCAGGAGTCTGCCTTGTTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCGGTATGGCAAATGCAAACATGAACTGCTGGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451445.6
CDS TCA 90 bp ATCTACAAGCTTCAACCGCTTGCTCATTCCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: IYKLQPLAHSSSRCT*CLAAGQQWRFRSLG
Trigger: TCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGAAGCTTGTAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414979.1
CDS-3UTR CAA 90 bp CAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGTTAGACTCCTGGCCTGCTaGTCAGATATCCAATCGCGG +
Preference number: 5 (lower is better)
Translates to: QPMKILGLPCGLWLNHDVRLLAC*SDIQSR
Trigger: CCGCGATTGGATATCTGACAAGCAGGCCAGGAGTCT...AACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CAA 90 bp AGCCCTGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCAGTTCATGTTTGCATTaGCCATACCGCCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: SPGSGCTYTVWMVVRDNTSSCLH*PYRPRH
Trigger: ATGCCTTGGGCGGTATGGCAAATGCAAACATGAACT...GGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp CATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATCCCAGAGTTTTCCACCACTaGCTCTCTGGAGGATACTGC +
Preference number: 5 (lower is better)
Translates to: HCPGLLSLATTAAAIANPRVFHH*LSGGYC
Trigger: GCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTCT...GGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCCTTCCAGAGTTTTCCACCACTaGCTCTCTGGAGGATACTGC +
Preference number: 5 (lower is better)
Translates to: WIWLHLHSMDGCQGQHPSRVFHH*LSGGYC
Trigger: GCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTCT...GGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTAGCCACCACGGCAGCTGCAATAGCAAATCCCAAACCAACTCCCATTGTTCCGGGCCTTCCGTGTGGCTaGTGGCTCAATCATGATGTT +
Preference number: 5 (lower is better)
Translates to: LATTAAAIANPKPTPIVPGLPCG*WLNHDV
Trigger: AACATCATGATTGAGCCACAAGCCACACGGAAGGCC...CGGAACAATGGGAGTTGGTTTGGGATTTGCTATTGCAGCTGCCGTGGTGGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp GCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ASCTCRWFLPPCQKTQMHLIPMY*MPSCWA
Trigger: TGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAG...GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp GATCCATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAAACACAGTATGGATGGTaGTCAGGGACAACACCCTTC +
Preference number: 5 (lower is better)
Translates to: DPLPRASIFSHHGSCNSKTQYGW*SGTTPF
Trigger: GAAGGGTGTTGTCCCTGACAACCATCCATACTGTGT...TTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AGCCCTGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCCATCTGGCTGATATCTaGGAGGCAGTCCAAAATGTA +
Preference number: 5 (lower is better)
Translates to: SPGSGCTYTVWMVVRDNTHLADI*EAVQNV
Trigger: TACATTTTGGACTGCCTCCAAGATATCAGCCAGATG...GGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp CATTGCCCAGGGCTTCTATCTTTAGCCACCACGGCAGCTGCAATAGCAAATCCCCTGCCTCAGGGATTTTaGGAGTTCTTCTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: HCPGLLSLATTAAAIANPLPQGF*EFFWCL
Trigger: CAAACACCAGAAGAACTCCAAAAATCCCTGAGGCAG...GGGATTTGCTATTGCAGCTGCCGTGGTGGCTAAAGATAGAAGCCCTGGGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TGGATCTGGCTGCACCTACACAGTATGGATGGTTGTCAGGGACAACACCCTTCCCTGCCTCAGGGATTTTaGGAGTTCTTCTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: WIWLHLHSMDGCQGQHPSLPQGF*EFFWCL
Trigger: CAAACACCAGAAGAACTCCAAAAATCCCTGAGGCAG...GGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp CCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATGGGACTAGCAGGAGATaGCTGCCTATGCAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PMKILGLPCGLWLNHDVDGTSRR*LPMQSR
Trigger: CCTGCTTTGCATAGGCAGCAATCTCCTGCTAGTCCC...ATCAACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS-3UTR CAA 90 bp ACAGCAGAGGTTTCTGCCATGCTAATAGGAGGTGACATGCAGCGTTCCATGTACTATGTACTCCACATCTaGCGTTTTCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: TAEVSAMLIGGDMQRSMYYVLHI*RFQGLS
Trigger: GCTCAGGCCCTGAAAACGCAAGATGTGGAGTACATA...GTACATGGAACGCTGCATGTCACCTCCTATTAGCATGGCAGAAACCTCTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CAA 90 bp TTCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FHHLLSGGYCHGVLSSSSLIPMY*MPSCWA
Trigger: TGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAG...AGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTAGCATAACAAGCCGCTaGCTCATTCCTCATCCCGAT +
Preference number: 5 (lower is better)
Translates to: NQLPLFRKYQHQACDEEGSITSR*LIPHPD
Trigger: ATCGGGATGAGGAATGAGCAAGCGGCTTGTTATGCT...ACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp GCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACGCCAGCAGTTCATGTTaGCATTTGCCATACCGCCCA +
Preference number: 5 (lower is better)
Translates to: ASCTCRWFLPPCQKTQMHASSSC*HLPYRP
Trigger: TGGGCGGTATGGCAAATGCAAACATGAACTGCTGGC...GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422591.5
CDS-3UTR CAA 90 bp ACAGCAGAGGTTTCTGCCATGCTAATAGGAGGTGACATGCAGCGTTCCATGTACACCAGCAGTTCATGTTaGCATTTGCCATACCGCCCA +
Preference number: 5 (lower is better)
Translates to: TAEVSAMLIGGDMQRSMYTSSSC*HLPYRP
Trigger: TGGGCGGTATGGCAAATGCAAACATGAACTGCTGGT...GTACATGGAACGCTGCATGTCACCTCCTATTAGCATGGCAGAAACCTCTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS GCA 90 bp GAGAATGGACTCAGACCCAGAATACGTGGGTTCAAACCCTGGCTCTaGTACTACCAGCTGTGTCACCAAAGGCAAGTTTTACTTAACCTG +
Preference number: 5 (lower is better)
Translates to: ENGLRPRIRGFKPWL*YYQLCHQRQVLLNL
Trigger: CAGGTTAAGTAAAACTTGCCTTTGGTGACACAGCTGGTAGTAGCAGAGCCAGGGTTTGAACCCACGTATTCTGGGTCTGAGTCCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472857.1
CDS-3UTR CAA 90 bp CAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGTTAGTTCATGTTTGCATTaGCCATACCGCCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: QPMKILGLPCGLWLNHDVSSCLH*PYRPRH
Trigger: ATGCCTTGGGCGGTATGGCAAATGCAAACATGAACT...AACATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CAA 90 bp ACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTAGGGCGGGCAGAGAACTaGGTATATAATCTACAAGCT +
Preference number: 5 (lower is better)
Translates to: TNSHCSESTSIKPVTRKVGRAEN*VYNLQA
Trigger: AGCTTGTAGATTATATACCAAGTTCTCTGCCCGCCC...TACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CAA 90 bp GCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACACACAGTATGGATGGTaGTCAGGGACAACACCCTTC +
Preference number: 5 (lower is better)
Translates to: ASCTCRWFLPPCQKTQMHTQYGW*SGTTPF
Trigger: GAAGGGTGTTGTCCCTGACAACCATCCATACTGTGT...GTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp ACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTGTGACGAGGAAGGTACCAAACCAACTCCCATaGTTCCGAAAGTACCAGCAT +
Preference number: 5 (lower is better)
Translates to: TNSHCSESTSIKPVTRKVPNQLP*FRKYQH
Trigger: ATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGG...TACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS CCA 90 bp CTGAAGGTTCACAAAATCTGCTGGTATGTCAACATAGCAAGCACCTaGACGACCATAGATACTGCTTCTCACTGCCTGAGGAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: LKVHKICWYVNIAST*TTIDTASHCLRKLL
Trigger: CAGGAGTTTCCTCAGGCAGTGAGAAGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGACATACCAGCAGATTTTGTGAACCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457447.6
CDS-3UTR CAA 90 bp AGCGTAAGCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAGCATAACAAGCCGCTaGCTCATTCCTCATCCCGAT +
Preference number: 5 (lower is better)
Translates to: SVSSTFPDDKKGLFGIPNSITSR*LIPHPD
Trigger: ATCGGGATGAGGAATGAGCAAGCGGCTTGTTATGCT...ATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGCTTACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp GTTCTGAAGCACAGTCCGTCCAATGTCCATAGTATTTGCTCCTTCACTTACCACAGCATAACAAGCCGCTaGCTCATTCCTCATCCCGAT +
Preference number: 5 (lower is better)
Translates to: VLKHSPSNVHSICSFTYHSITSR*LIPHPD
Trigger: ATCGGGATGAGGAATGAGCAAGCGGCTTGTTATGCT...GTGGTAAGTGAAGGAGCAAATACTATGGACATTGGACGGACTGTGCTTCAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTTCCTAGCAAAGTAACAGCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGAGACTCCTGGCCTGCTaGTCAGATATCCAATCGCGG +
Preference number: 5 (lower is better)
Translates to: FPSKVTAGFTLFPNSSAQRLLAC*SDIQSR
Trigger: CCGCGATTGGATATCTGACAAGCAGGCCAGGAGTCT...CTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGTTACTTTGCTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp GGTCAGCCAATGAAAATCCTGGGCCTTCCGTGTGGCTTGTGGCTCAATCATGATGAGTTCTTCTGGTGTTaGTACAAAATACCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GQPMKILGLPCGLWLNHDEFFWC*YKIPFA
Trigger: GGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC...ATCATGATTGAGCCACAAGCCACACGGAAGGCCCAGGATTTTCATTGGCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CAA 90 bp ATTGGCAAGTTGTACCTGCAGATGGTTTCTACCTCCATGCCAGAAAACCCAAATGGCCTTCCGTGTGGCTaGTGGCTCAATCATGATGTT +
Preference number: 5 (lower is better)
Translates to: IGKLYLQMVSTSMPENPNGLPCG*WLNHDV
Trigger: AACATCATGATTGAGCCACAAGCCACACGGAAGGCC...ATTTGGGTTTTCTGGCATGGAGGTAGAAACCATCTGCAGGTACAACTTGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACTCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSSGVCTKYPLPPNAVMTLIPMY*MPSCWA
Trigger: TGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAG...AGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TACTGCCATGGTGTTTTATCAAGTTCCTCTAAAAGCTGCTTAGTGACAGCATGTAGACTCCTGGCCTGCTaGTCAGATATCCAATCGCGG +
Preference number: 5 (lower is better)
Translates to: YCHGVLSSSSKSCLVTACRLLAC*SDIQSR
Trigger: CCGCGATTGGATATCTGACAAGCAGGCCAGGAGTCT...ACATGCTGTCACTAAGCAGCTTTTAGAGGAACTTGATAAAACACCATGGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp GATGGTTTCTACCTCCATGCCAGAAAACCCAAATGCACTGTCTCCTTCCACACACATCTGGCTGATATCTaGGAGGCAGTCCAAAATGTA +
Preference number: 5 (lower is better)
Translates to: DGFYLHARKPKCTVSFHTHLADI*EAVQNV
Trigger: TACATTTTGGACTGCCTCCAAGATATCAGCCAGATG...TGTGTGGAAGGAGACAGTGCATTTGGGTTTTCTGGCATGGAGGTAGAAACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAAGTATGATTGGCAAGTaGTACCTGCAGATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KKGLFGIPNNRSRRAHSRSMIGK*YLQMVS
Trigger: AGAAACCATCTGCAGGTACAACTTGCCAATCATACT...TCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAGAAGGGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGATGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG +
Preference number: 5 (lower is better)
Translates to: KKGLFGIPNNRSRRAHSRCTKYP*PPNAVM
Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACA...TCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGGGCCTTCCGTGTGGCTaGTGGCTCAATCATGATGTT +
Preference number: 5 (lower is better)
Translates to: FRVACGSIMMLIREGLVVGLPCG*WLNHDV
Trigger: AACATCATGATTGAGCCACAAGCCACACGGAAGGCC...CACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACACGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGTATGTACTCCACATCTaGCGTTTTCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: FRVACGSIMMLIREGLVVYVLHI*RFQGLS
Trigger: GCTCAGGCCCTGAAAACGCAAGATGTGGAGTACATA...CACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACACGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGTCTGCTATGTACTCCACATCTaGCGTTTTCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: CGLWLNHDVDKRRFSCVCYVLHI*RFQGLS
Trigger: GCTCAGGCCCTGAAAACGCAAGATGTGGAGTACATA...GCAGACACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AGCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAGGGCGGGCAGAGAACTaGGTATATAATCTACAAGCT +
Preference number: 5 (lower is better)
Translates to: SSTFPDDKKGLFGIPNNRGRAEN*VYNLQA
Trigger: AGCTTGTAGATTATATACCAAGTTCTCTGCCCGCCC...TCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CAA 90 bp GGGTTGTTTGGCATTCCTAATAACAGAAGCCGCCGTGCACACAGCAGAGGTTTCATAAGAAGGGGTTGTTaGGCATTCCTAATAACAGAA +
Preference number: 5 (lower is better)
Translates to: GLFGIPNNRSRRAHSRGFIRRGC*AFLITE
Trigger: TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTAT...GAAACCTCTGCTGTGTGCACGGCGGCTTCTGTTATTAGGAATGCCAAACAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGAGAGTTTTCCACCACTaGCTCTCTGGAGGATACTGC +
Preference number: 5 (lower is better)
Translates to: WSSSGVCTKYPLPPNAVMRVFHH*LSGGYC
Trigger: GCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTCT...CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTCCACCACTTGCTCTCTGGAGGATACTGCCATGGTGTTTTATCAAGTTCCTCTTTAGAAGCTAGTTCCTaGGATGCAGCTTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: FHHLLSGGYCHGVLSSSSLEASS*DAASLL
Trigger: GAGCAATGAAGCTGCATCCAAGGAACTAGCTTCTAA...AGAGGAACTTGATAAAACACCATGGCAGTATCCTCCAGAGAGCAAGTGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTTCTTGATACTCTCTTCTGCATGAGCGTAAGCAGCACCTTTCCCGATGATAAGCACACAGATGATCCATaGCCCAGGGCTTCTATCTTT +
Preference number: 5 (lower is better)
Translates to: FLDTLFCMSVSSTFPDDKHTDDP*PRASIF
Trigger: AAAGATAGAAGCCCTGGGCAATGGATCATCTGTGTG...CTTATCATCGGGAAAGGTGCTGCTTACGCTCATGCAGAAGAGAGTATCAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp GTCAACATAGCAAGCACCTGGACGACCATAGATACTGCTTCTCACTGCCTTTTCGAGTTCTTCTGGTGTTaGTACAAAATACCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: VNIASTWTTIDTASHCLFEFFWC*YKIPFA
Trigger: GGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC...GAAAAGGCAGTGAGAAGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CAA 90 bp GAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACACCAGCAGTTCATGTTaGCATTTGCCATACCGCCCA +
Preference number: 5 (lower is better)
Translates to: EFFWCLYKIPFASKCSHDTSSSC*HLPYRP
Trigger: TGGGCGGTATGGCAAATGCAAACATGAACTGCTGGT...GTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLIPMY*MPSCWA
Trigger: TGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLIPMY*MPSCWA
Trigger: TGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGACTCCTGGCCTGCTaGTCAGATATCCAATCGCGG +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYRLLAC*SDIQSR
Trigger: CCGCGATTGGATATCTGACAAGCAGGCCAGGAGTCT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAGACTCCTGGCCTGCTaGTCAGATATCCAATCGCGG +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLRLLAC*SDIQSR
Trigger: CCGCGATTGGATATCTGACAAGCAGGCCAGGAGTCT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp TGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGAGTTCATGTTTGCATTaGCCATACCGCCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: WSSSGVCTKYPLPPNAVMSSCLH*PYRPRH
Trigger: ATGCCTTGGGCGGTATGGCAAATGCAAACATGAACT...CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp GCAGCACCTTTCCCGATGATAAGAAGGGGTTGTTTGGCATTCCTAATAACAGAATTAGAAGCTAGTTCCTaGGATGCAGCTTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: AAPFPMIRRGCLAFLITELEASS*DAASLL
Trigger: GAGCAATGAAGCTGCATCCAAGGAACTAGCTTCTAA...TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTATCATCGGGAAAGGTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AATAGCAAATCCCAAACCAACTCCCATTGTTCCGAAAGTACCAGCATCAAGCCTTTAGAAGCTAGTTCCTaGGATGCAGCTTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: NSKSQTNSHCSESTSIKPLEASS*DAASLL
Trigger: GAGCAATGAAGCTGCATCCAAGGAACTAGCTTCTAA...AGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGGGATTTGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGCACACAGATGATCCATaGCCCAGGGCTTCTATCTTT +
Preference number: 5 (lower is better)
Translates to: FRVACGSIMMLIREGLVVHTDDP*PRASIF
Trigger: AAAGATAGAAGCCCTGGGCAATGGATCATCTGTGTG...CACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACACGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp ACAGCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATACTGCCTCAGGGATTTTaGGAGTTCTTCTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: TAGFTLFPNSSAQISTWILPQGF*EFFWCL
Trigger: CAAACACCAGAAGAACTCCAAAAATCCCTGAGGCAG...TATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACAAGCAAGGGCCTGCTaGTCAGATATCCAATCGCGG +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLQARAC*SDIQSR
Trigger: CCGCGATTGGATATCTGACAAGCAGGCCCTTGCTTG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456194.6
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGCCAGCAGTTCATGTTaGCATTTGCCATACCGCCCA +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYASSSC*HLPYRP
Trigger: TGGGCGGTATGGCAAATGCAAACATGAACTGCTGGC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321169.10
ENST00000457447.6
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGCCAGCAGTTCATGTTaGCATTTGCCATACCGCCCA +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLASSSC*HLPYRP
Trigger: TGGGCGGTATGGCAAATGCAAACATGAACTGCTGGC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321169.10
ENST00000457447.6
CDS-3UTR CAA 90 bp TGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGAGCTCCCATTGTTTCTaGGTTTCTTTCAGAGGAACC +
Preference number: 5 (lower is better)
Translates to: WSSSGVCTKYPLPPNAVMSSHCF*VSFRGT
Trigger: GGTTCCTCTGAAAGAAACCAAGAAACAATGGGAGCT...CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422591.5
CDS-3UTR CAA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCACACAGTATGGATGGTaGTCAGGGACAACACCCTTC +
Preference number: 5 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFTQYGW*SGTTPF
Trigger: GAAGGGTGTTGTCCCTGACAACCATCCATACTGTGT...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTTCCTAGCAAAGTAACAGCGGGCTTTACATTATTCCCCAATTCTTCTGCACAGAATTACATCAGCAAATaGCAAAGCCCTGGATCTGGC +
Preference number: 5 (lower is better)
Translates to: FPSKVTAGFTLFPNSSAQNYISK*QSPGSG
Trigger: GCCAGATCCAGGGCTTTGCAATTTGCTGATGTAATT...CTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGTTACTTTGCTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTTGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCACCAAACCAACTCCCATaGTTCCGAAAGTACCAGCAT +
Preference number: 5 (lower is better)
Translates to: FGVLLVFVQNTLCLQMQSPNQLP*FRKYQH
Trigger: ATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGG...TGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGGCCTTCCGTGTGGCTaGTGGCTCAATCATGATGTT +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYGLPCG*WLNHDV
Trigger: AACATCATGATTGAGCCACAAGCCACACGGAAGGCC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGGCCTTCCGTGTGGCTaGTGGCTCAATCATGATGTT +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLGLPCG*WLNHDV
Trigger: AACATCATGATTGAGCCACAAGCCACACGGAAGGCC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTATGTACTCCACATCTaGCGTTTTCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYYVLHI*RFQGLS
Trigger: GCTCAGGCCCTGAAAACGCAAGATGTGGAGTACATA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATATGTACTCCACATCTaGCGTTTTCAGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLYVLHI*RFQGLS
Trigger: GCTCAGGCCCTGAAAACGCAAGATGTGGAGTACATA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGCATAACAAGCCGCTaGCTCATTCCTCATCCCGAT +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSITSR*LIPHPD
Trigger: ATCGGGATGAGGAATGAGCAAGCGGCTTGTTATGCT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAGCATAACAAGCCGCTaGCTCATTCCTCATCCCGAT +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLSITSR*LIPHPD
Trigger: ATCGGGATGAGGAATGAGCAAGCGGCTTGTTATGCT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AGCTGCTTAGTGACAGCATGTATGTTTCCTAGCAAAGTAACAGCGGGCTTTACAGATGATAAGAAGGGGTaGTTTGGCATTCCTAATAAC +
Preference number: 5 (lower is better)
Translates to: SCLVTACMFPSKVTAGFTDDKKG*FGIPNN
Trigger: GTTATTAGGAATGCCAAACAACCCCTTCTTATCATC...TGTAAAGCCCGCTGTTACTTTGCTAGGAAACATACATGCTGTCACTAAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAACACAGTATGGATGGTaGTCAGGGACAACACCCTTC +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLTQYGW*SGTTPF
Trigger: GAAGGGTGTTGTCCCTGACAACCATCCATACTGTGT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATACACAGTATGGATGGTaGTCAGGGACAACACCCTTC +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYTQYGW*SGTTPF
Trigger: GAAGGGTGTTGTCCCTGACAACCATCCATACTGTGT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp TTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACCAATTACATCAGCAAATaGCAAAGCCCTGGATCTGGC +
Preference number: 5 (lower is better)
Translates to: LFTTNSMIGKLYLQMVSTNYISK*QSPGSG
Trigger: GCCAGATCCAGGGCTTTGCAATTTGCTGATGTAATT...GGTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGAGTTTTCCACCACTaGCTCTCTGGAGGATACTGC +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYRVFHH*LSGGYC
Trigger: GCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTCT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAGAGTTTTCCACCACTaGCTCTCTGGAGGATACTGC +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLRVFHH*LSGGYC
Trigger: GCAGTATCCTCCAGAGAGCAAGTGGTGGAAAACTCT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CAA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCCCAAACCAACTCCCATaGTTCCGAAAGTACCAGCAT +
Preference number: 5 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFPNQLP*FRKYQH
Trigger: ATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGG...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGTCTGCAGTATGATTGGCAAGTaGTACCTGCAGATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: CGLWLNHDVDKRRFSCVCSMIGK*YLQMVS
Trigger: AGAAACCATCTGCAGGTACAACTTGCCAATCATACT...GCAGACACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TGGAGTTCTTCTGGTGTTTGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGTGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG +
Preference number: 5 (lower is better)
Translates to: WSSSGVCTKYPLPPNAVMCTKYP*PPNAVM
Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACA...CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACAAACACCAGAAGAACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGTCTGCGAGTTCTTCTGGTGTTaGTACAAAATACCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: CGLWLNHDVDKRRFSCVCEFFWC*YKIPFA
Trigger: GGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC...GCAGACACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAACCAGCAGTTCATGTTaGCATTTGCCATACCGCCCA +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLTSSSC*HLPYRP
Trigger: TGGGCGGTATGGCAAATGCAAACATGAACTGCTGGT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000451445.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAGTTCATGTTTGCATTaGCCATACCGCCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLSSCLH*PYRPRH
Trigger: ATGCCTTGGGCGGTATGGCAAATGCAAACATGAACT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGTTCATGTTTGCATTaGCCATACCGCCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSSCLH*PYRPRH
Trigger: ATGCCTTGGGCGGTATGGCAAATGCAAACATGAACT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGGGCGGGCAGAGAACTaGGTATATAATCTACAAGCT +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYGRAEN*VYNLQA
Trigger: AGCTTGTAGATTATATACCAAGTTCTCTGCCCGCCC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGGGCGGGCAGAGAACTaGGTATATAATCTACAAGCT +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLGRAEN*VYNLQA
Trigger: AGCTTGTAGATTATATACCAAGTTCTCTGCCCGCCC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACCAAACCAACTCCCATaGTTCCGAAAGTACCAGCAT +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLPNQLP*FRKYQH
Trigger: ATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCCAAACCAACTCCCATaGTTCCGAAAGTACCAGCAT +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYPNQLP*FRKYQH
Trigger: ATGCTGGTACTTTCGGAACAATGGGAGTTGGTTTGG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACACACAGATGATCCATaGCCCAGGGCTTCTATCTTT +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLHTDDP*PRASIF
Trigger: AAAGATAGAAGCCCTGGGCAATGGATCATCTGTGTG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCACACAGATGATCCATaGCCCAGGGCTTCTATCTTT +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYHTDDP*PRASIF
Trigger: AAAGATAGAAGCCCTGGGCAATGGATCATCTGTGTG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACTGCCTCAGGGATTTTaGGAGTTCTTCTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLPQGF*EFFWCL
Trigger: CAAACACCAGAAGAACTCCAAAAATCCCTGAGGCAG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCTGCCTCAGGGATTTTaGGAGTTCTTCTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLPQGF*EFFWCL
Trigger: CAAACACCAGAAGAACTCCAAAAATCCCTGAGGCAG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATACAGATATCAACCGCTaGCTCATTCCTCATCCCGAT +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYTDINR*LIPHPD
Trigger: ATCGGGATGAGGAATGAGCAAGCGGTTGATATCTGT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435217.6
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGCTCCCATTGTTTCTaGGTTTCTTTCAGAGGAACC +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSSHCF*VSFRGT
Trigger: GGTTCCTCTGAAAGAAACCAAGAAACAATGGGAGCT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321169.10
ENST00000456194.6
ENST00000457447.6
CDS-3UTR CAA 90 bp TTCCGTGTGGCTTGTGGCTCAATCATGATGTTGATAAGAGAAGGTTTAGTTGTGATAAGAAGGGGTTGTTaGGCATTCCTAATAACAGAA +
Preference number: 5 (lower is better)
Translates to: FRVACGSIMMLIREGLVVIRRGC*AFLITE
Trigger: TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTAT...CACAACTAAACCTTCTCTTATCAACATCATGATTGAGCCACAAGCCACACGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp TTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCTACCGATGATAAGAAGGGGTaGTTTGGCATTCCTAATAAC +
Preference number: 5 (lower is better)
Translates to: LFTTNSMIGKLYLQMVSTDDKKG*FGIPNN
Trigger: GTTATTAGGAATGCCAAACAACCCCTTCTTATCATC...GGTAGAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAATTACATCAGCAAATaGCAAAGCCCTGGATCTGGC +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLNYISK*QSPGSG
Trigger: GCCAGATCCAGGGCTTTGCAATTTGCTGATGTAATT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAATTACATCAGCAAATaGCAAAGCCCTGGATCTGGC +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYNYISK*QSPGSG
Trigger: GCCAGATCCAGGGCTTTGCAATTTGCTGATGTAATT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATCATCTGGCTGATATCTaGGAGGCAGTCCAAAATGTA +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYHLADI*EAVQNV
Trigger: TACATTTTGGACTGCCTCCAAGATATCAGCCAGATG...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTACATCTGGCTGATATCTaGGAGGCAGTCCAAAATGTA +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLHLADI*EAVQNV
Trigger: TACATTTTGGACTGCCTCCAAGATATCAGCCAGATG...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321169.10
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTAGAAGCTAGTTCCTaGGATGCAGCTTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLLEASS*DAASLL
Trigger: GAGCAATGAAGCTGCATCCAAGGAACTAGCTTCTAA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTTAGAAGCTAGTTCCTaGGATGCAGCTTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYLEASS*DAASLL
Trigger: GAGCAATGAAGCTGCATCCAAGGAACTAGCTTCTAA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000628377.2
CDS-3UTR CAA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCAGTATGATTGGCAAGTaGTACCTGCAGATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFSMIGK*YLQMVS
Trigger: AGAAACCATCTGCAGGTACAACTTGCCAATCATACT...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp ATTGTTATTCACTACCAACAGTATGATTGGCAAGTTGTACCTGCAGATGGTTTCGATGATAAGAAGGGGTaGTTTGGCATTCCTAATAAC +
Preference number: 5 (lower is better)
Translates to: IVIHYQQYDWQVVPADGFDDKKG*FGIPNN
Trigger: GTTATTAGGAATGCCAAACAACCCCTTCTTATCATC...GAAACCATCTGCAGGTACAACTTGCCAATCATACTGTTGGTAGTGAATAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383779.8
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATAGTATGATTGGCAAGTaGTACCTGCAGATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYSMIGK*YLQMVS
Trigger: AGAAACCATCTGCAGGTACAACTTGCCAATCATACT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAAGTATGATTGGCAAGTaGTACCTGCAGATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLSMIGK*YLQMVS
Trigger: AGAAACCATCTGCAGGTACAACTTGCCAATCATACT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLCTKYP*PPNAVM
Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACA...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATTGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYCTKYP*PPNAVM
Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACA...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGAGTTCTTCTGGTGTTaGTACAAAATACCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLEFFWC*YKIPFA
Trigger: GGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGAGTTCTTCTGGTGTTaGTACAAAATACCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYEFFWC*YKIPFA
Trigger: GGCAAAGGGTATTTTGTACAAACACCAGAAGAACTC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp ATTATTCCCCAATTCTTCTGCACAGATATCAACCTGGATAAACTTCACATCTGGATAAGAAGGGGTTGTTaGGCATTCCTAATAACAGAA +
Preference number: 5 (lower is better)
Translates to: IIPQFFCTDINLDKLHIWIRRGC*AFLITE
Trigger: TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTAT...CCAGATGTGAAGTTTATCCAGGTTGATATCTGTGCAGAAGAATTGGGGAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422591.5
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATGATGATAAGAAGGGGTaGTTTGGCATTCCTAATAAC +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYDDKKG*FGIPNN
Trigger: GTTATTAGGAATGCCAAACAACCCCTTCTTATCATC...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAGATGATAAGAAGGGGTaGTTTGGCATTCCTAATAAC +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLDDKKG*FGIPNN
Trigger: GTTATTAGGAATGCCAAACAACCCCTTCTTATCATC...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTAATAAGAAGGGGTTGTTaGGCATTCCTAATAACAGAA +
Preference number: 5 (lower is better)
Translates to: KISSCKKEKTQDHQLASLIRRGC*AFLITE
Trigger: TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTAT...TAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS-3UTR CAA 90 bp AAATTTCATCTTGCAAGAAAGAGAAAACTCAAGACCACCAACTGGCGTCTTTATATAAGAAGGGGTTGTTaGGCATTCCTAATAACAGAA +
Preference number: 5 (lower is better)
Translates to: KFHLARKRKLKTTNWRLYIRRGC*AFLITE
Trigger: TTCTGTTATTAGGAATGCCAAACAACCCCTTCTTAT...ATAAAGACGCCAGTTGGTGGTCTTGAGTTTTCTCTTTCTTGCAAGATGAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000628377.2
CDS GCA 72 bp GCAAACGCGAAATCGGCAGCACGCCACCTCTGGTACTaGACCTCTGACGGACAGGAGGGCAACCAACTGCCT +
Preference number: 6 (lower is better)
Translates to: ANAKSAARHLWY*TSDGQEGNQLP
Trigger: AGGCAGTTGGTTGCCCTCCTGTCCGTCAGAGGTGCAGTACCAGAGGTGGCGTGCTGCCGATTTCGCGTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS CCA 72 bp AGCAAGGCAAACGCGAAATCGGCAGCACGCCACCTCTaGTACTGCACCTCTGACGGACAGGAGGGCAACCAA +
Preference number: 6 (lower is better)
Translates to: SKANAKSAARHL*YCTSDGQEGNQ
Trigger: TTGGTTGCCCTCCTGTCCGTCAGAGGTGCAGTACCAGAGGTGGCGTGCTGCCGATTTCGCGTTTGCCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421993.5
ENST00000628377.2
CDS CAA 72 bp CACCTGGATCTGGCTGCACCTACACAGTATGGATGGTaGTCAGGGACAACACCCTTCCCCATAGGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: HLDLAAPTQYGW*SGTTPFPIGVG
Trigger: GCCCACCCCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421993.5
CDS TCA 72 bp GAAATCGGCAGCACGCCACCTCTGGTACTGCACCTCTaGCGGACAGGAGGGCAACCAACTGCCTTAAACAAC +
Preference number: 6 (lower is better)
Translates to: EIGSTPPLVLHL*RTGGQPTALNN
Trigger: GTTGTTTAAGGCAGTTGGTTGCCCTCCTGTCCGTCAGAGGTGCAGTACCAGAGGTGGCGTGCTGCCGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS GCA 72 bp GACTTTAGCACCAGACACCTGCTCCTCGCTGCGCTCTaGGAAGTTACTGTCCGGCATCTTCCACCGAAAAGC +
Preference number: 6 (lower is better)
Translates to: DFSTRHLLLAAL*EVTVRHLPPKS
Trigger: GCTTTTCGGTGGAAGATGCCGGACAGTAACTTCGCAGAGCGCAGCGAGGAGCAGGTGTCTGGTGCTAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000414979.1
ENST00000421993.5
ENST00000422591.5
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000472857.1
ENST00000628377.2
CDS CAA 90 bp CCTGAGTCCATACTCACCGCTTGCTCATTCCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGG +
Preference number: 6 (lower is better)
Translates to: PESILTACSFLIPMY*MPSCWAAMAISVTG
Trigger: CCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTGAGTATGGACTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472857.1
CDS GCA 72 bp GCAGCGTTCCATGTACCAGCAGTTCATGTTTGCATTTaGCATACCGCCCAAGGCATGGATGAGACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: AAFHVPAVHVCI*HTAQGMDETWA
Trigger: GGCCCAGGTCTCATCCATGCCTTGGGCGGTATGGCAAATGCAAACATGAACTGCTGGTACATGGAACGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451445.6
CDS GCA 72 bp GAATGCCAGAGGGAGGCGGGACTAGCAGGAGATTGCTaGCTATGCAAAGCAGGTAAGAAGCCGAACTCTGAG +
Preference number: 6 (lower is better)
Translates to: ECQREAGLAGDC*LCKAGKKPNSE
Trigger: CTCAGAGTTCGGCTTCTTACCTGCTTTGCATAGGCAGCAATCTCCTGCTAGTCCCGCCTCCCTCTGGCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS GCA 72 bp CCAGAATGCCAGAGGGAGGCGGGACTAGCAGGAGATTaGTGCCTATGCAAAGCAGGTAAGAAGCCGAACTCT +
Preference number: 6 (lower is better)
Translates to: PECQREAGLAGD*CLCKAGKKPNS
Trigger: AGAGTTCGGCTTCTTACCTGCTTTGCATAGGCAGCAATCTCCTGCTAGTCCCGCCTCCCTCTGGCATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS CCA 72 bp ACACACCTGGATCTGGCTGCACCTACACAGTATGGATaGTTGTCAGGGACAACACCCTTCCCCATAGGGGTG +
Preference number: 6 (lower is better)
Translates to: THLDLAAPTQYG*LSGTTPFPIGV
Trigger: CACCCCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421993.5
CDS CCA 72 bp TGCCACACACCTGGATCTGGCTGCACCTACACAGTATaGATGGTTGTCAGGGACAACACCCTTCCCCATAGG +
Preference number: 6 (lower is better)
Translates to: CHTPGSGCTYTV*MVVRDNTLPHR
Trigger: CCTATGGGGAAGGGTGTTGTCCCTGACAACCATCCATACTGTGTAGGTGCAGCCAGATCCAGGTGTGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421993.5
CDS TCA 72 bp AACAAGCCGCTTGCTCATTCCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAGCAATGGCGATTTCGG +
Preference number: 6 (lower is better)
Translates to: NKPLAHSSSRCT*CLAAGQQWRFR
Trigger: CCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000421993.5
ENST00000422591.5
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000469454.1
ENST00000628377.2
CDS TCA 72 bp CTTCAACCGCTTGCTCATTCCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAGCAATGGCGATTTCGG +
Preference number: 6 (lower is better)
Translates to: LQPLAHSSSRCT*CLAAGQQWRFR
Trigger: CCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414979.1
CDS TCA 72 bp TACTCACCGCTTGCTCATTCCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAGCAATGGCGATTTCGG +
Preference number: 6 (lower is better)
Translates to: YSPLAHSSSRCT*CLAAGQQWRFR
Trigger: CCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472857.1
CDS GCA 72 bp GCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGGATaGCTACGATGCCAAATATGTACTCCACATCTTGCG +
Preference number: 6 (lower is better)
Translates to: AAGQQWRFRSLG*LRCQICTPHLA
Trigger: CGCAAGATGTGGAGTACATATTTGGCATCGTAGGCATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000414979.1
ENST00000421993.5
ENST00000422591.5
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000472857.1
ENST00000628377.2
CDS GCA 72 bp TGCTCATTCCTCATCCCGATGTACTTGATGCCTAGCTaGTGGGCAGCAATGGCGATTTCGGTCACTGGGATG +
Preference number: 6 (lower is better)
Translates to: CSFLIPMYLMPS*WAAMAISVTGM
Trigger: CATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000414979.1
ENST00000421993.5
ENST00000422591.5
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000469454.1
ENST00000472857.1
ENST00000628377.2
CDS GCA 72 bp GGTACTGCACCTCTGACGGACAGGAGGGCAACCAACTaGCTTAAACAACGGGAAGGAAGAGGCGGTCTAAAT +
Preference number: 6 (lower is better)
Translates to: GTAPLTDRRATN*LKQREGRGGLN
Trigger: ATTTAGACCGCCTCTTCCTTCCCGTTGTTTAAGGCAGTTGGTTGCCCTCCTGTCCGTCAGAGGTGCAGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS CCA 72 bp TCATTCCTCATCCCGATGTACTTGATGCCTAGCTGCTaGGCAGCAATGGCGATTTCGGTCACTGGGATGCCT +
Preference number: 6 (lower is better)
Translates to: SFLIPMYLMPSC*AAMAISVTGMP
Trigger: AGGCATCCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000414979.1
ENST00000421993.5
ENST00000422591.5
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000469454.1
ENST00000472857.1
ENST00000628377.2
CDS CAA 72 bp GCTTCAACCGCTTGCTCATTCCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCAGCAATGGCGATTTCG +
Preference number: 6 (lower is better)
Translates to: ASTACSFLIPMY*MPSCWAAMAIS
Trigger: CGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414979.1
CDS CAA 90 bp TCTGCACAGATATCAACCGCTTGCTCATTCCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGG +
Preference number: 6 (lower is better)
Translates to: SAQISTACSFLIPMY*MPSCWAAMAISVTG
Trigger: CCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGATATCTGTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435217.6
CDS TCA 72 bp TATCAACCGCTTGCTCATTCCTCATCCCGATGTACTTaGTGCCTAGCTGCTGGGCAGCAATGGCGATTTCGG +
Preference number: 6 (lower is better)
Translates to: YQPLAHSSSRCT*CLAAGQQWRFR
Trigger: CCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435217.6
CDS GCA 72 bp ACCACCAATCACAAGCAAGGGCCAGCAGTTCATGTTTaGATTTGCCATACCGCCCAAGGCATGGATGAGACC +
Preference number: 6 (lower is better)
Translates to: TTNHKQGPAVHV*ICHTAQGMDET
Trigger: GGTCTCATCCATGCCTTGGGCGGTATGGCAAATGCAAACATGAACTGCTGGCCCTTGCTTGTGATTGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321169.10
ENST00000422591.5
ENST00000457447.6
CDS CAA 72 bp ATACTCACCGCTTGCTCATTCCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCAGCAATGGCGATTTCG +
Preference number: 6 (lower is better)
Translates to: ILTACSFLIPMY*MPSCWAAMAIS
Trigger: CGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472857.1
CDS CAA 90 bp AATCTACAAGCTTCAACCGCTTGCTCATTCCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCAGCAATGGCGATTTCGGTCACTGGG +
Preference number: 6 (lower is better)
Translates to: NLQASTACSFLIPMY*MPSCWAAMAISVTG
Trigger: CCCAGTGACCGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGAAGCTTGTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414979.1
CDS TCA 72 bp CCAAATATGTACTCCACATCTTGCGTTTTCAGGGCCTaGGCGATGACTTTAGCACCAGACACCTGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: PNMYSTSCVFRA*AMTLAPDTCSS
Trigger: CGAGGAGCAGGTGTCTGGTGCTAAAGTCATCGCTCAGGCCCTGAAAACGCAAGATGTGGAGTACATATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000414979.1
ENST00000421993.5
ENST00000422591.5
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000472857.1
ENST00000628377.2
CDS TCA 72 bp GCACACAGCAGAGGTTTCTGCCATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTACCTGAGGAAACTCCT +
Preference number: 6 (lower is better)
Translates to: AHSRGFCHANRR*HAAFHVPEETP
Trigger: AGGAGTTTCCTCAGGTACATGGAACGCTGCATGTCACCTCCTATTAGCATGGCAGAAACCTCTGCTGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422591.5
CDS TCA 72 bp AGAGGCGGTCTAAATTCGTCCACTTCCCGGGAGAGGTaGGAATGTAAACACGCGCGTTCTCCAATCAGAACT +
Preference number: 6 (lower is better)
Translates to: RGGLNSSTSRER*ECKHARSPIRT
Trigger: AGTTCTGATTGGAGAACGCGCGTGTTTACATTCTCACCTCTCCCGGGAAGTGGACGAATTTAGACCGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628377.2
CDS GCA 72 bp ATCTACAAGCTTCAACCAGCAGTTCATGTTTGCATTTaGCATACCGCCCAAGGCATGGATGAGACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: IYKLQPAVHVCI*HTAQGMDETWA
Trigger: GGCCCAGGTCTCATCCATGCCTTGGGCGGTATGGCAAATGCAAACATGAACTGCTGGTTGAAGCTTGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS CCA 72 bp CAGTTCATGTTTGCATTTGCCATACCGCCCAAGGCATaGATGAGACCTGGGCCAGAAACAACAAGGCAGACT +
Preference number: 6 (lower is better)
Translates to: QFMFAFAIPPKA*MRPGPETTRQT
Trigger: AGTCTGCCTTGTTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGGCGGTATGGCAAATGCAAACATGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000422591.5
ENST00000451445.6
ENST00000457447.6
ENST00000628377.2
CDS CAA 72 bp ATATCAACCGCTTGCTCATTCCTCATCCCGATGTACTaGATGCCTAGCTGCTGGGCAGCAATGGCGATTTCG +
Preference number: 6 (lower is better)
Translates to: ISTACSFLIPMY*MPSCWAAMAIS
Trigger: CGAAATCGCCATTGCTGCCCAGCAGCTAGGCATCAAGTACATCGGGATGAGGAATGAGCAAGCGGTTGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435217.6
CDS CAA 90 bp GCTTCTCACTGCCTGAGGAAACTCCTGGAAAGCTCCCATTGTTTCTaGGTTTCTTTCAGAGGAACCACCAATCACAAGCAAGGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: ASHCLRKLLESSHCF*VSFRGTTNHKQGPA
Trigger: TGCTGGCCCTTGCTTGTGATTGGTGGTTCCTCTGAAAGAAACCAAGAAACAATGGGAGCTTTCCAGGAGTTTCCTCAGGCAGTGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457447.6
CDS TCA 72 bp GCACACAGCAGAGGTTTCTGCCATGCTAATAGGAGGTaGCATGCAGCGTTCCATGTACCAGCAGTTCATGTT +
Preference number: 6 (lower is better)
Translates to: AHSRGFCHANRR*HAAFHVPAVHV
Trigger: AACATGAACTGCTGGTACATGGAACGCTGCATGTCACCTCCTATTAGCATGGCAGAAACCTCTGCTGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451445.6
CDS GCA 72 bp CAGCAATGGCGATTTCGGTCACTGGGATGCCTACGATaGCAAATATGTACTCCACATCTTGCGTTTTCAGGG +
Preference number: 6 (lower is better)
Translates to: QQWRFRSLGCLR*QICTPHLAFSG
Trigger: CCCTGAAAACGCAAGATGTGGAGTACATATTTGGCATCGTAGGCATCCCAGTGACCGAAATCGCCATTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000321169.10
ENST00000383779.8
ENST00000414979.1
ENST00000421993.5
ENST00000422591.5
ENST00000435217.6
ENST00000451445.6
ENST00000456194.6
ENST00000457447.6
ENST00000460907.1
ENST00000472857.1
ENST00000628377.2
CDS GCA 72 bp TGTCAACATAGCAAGCACCTGGACGACCATAGATACTaGTTCTCACTGCCTGAGGAAACTCCTGGAAAGCTC +
Preference number: 6 (lower is better)
Translates to: CQHSKHLDDHRY*FSLPEETPGKL
Trigger: GAGCTTTCCAGGAGTTTCCTCAGGCAGTGAGAAGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457447.6
CDS CCA 72 bp CACAAAATCTGCTGGTATGTCAACATAGCAAGCACCTaGACGACCATAGATACTGCTTCTCACTGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: HKICWYVNIAST*TTIDTASHCLR
Trigger: CCTCAGGCAGTGAGAAGCAGTATCTATGGTCGTCCAGGTGCTTGCTATGTTGACATACCAGCAGATTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457447.6
CDS CAA 72 bp GGAATAGCTTCTATGCTGCTTGGGCGGGCAGAGAACTaGGTATATAATCTACAAGCTTCAACCGCTTGCTCA +
Preference number: 6 (lower is better)
Translates to: GIASMLLGRAEN*VYNLQASTACS
Trigger: TGAGCAAGCGGTTGAAGCTTGTAGATTATATACCAAGTTCTCTGCCCGCCCAAGCAGCATAGAAGCTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414979.1
CDS GCA 72 bp AGTAACAGCGGGCTTTACATTATTCCCCAATTCTTCTaGACAGATATCAACCGCTTGCTCATTCCTCATCCC +
Preference number: 6 (lower is better)
Translates to: SNSGLYIIPQFF*TDINRLLIPHP
Trigger: GGGATGAGGAATGAGCAAGCGGTTGATATCTGTGCAGAAGAATTGGGGAATAATGTAAAGCCCGCTGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435217.6
CDS GCA 72 bp TATATAATCTACAAGCTTCAACCAGCAGTTCATGTTTaGATTTGCCATACCGCCCAAGGCATGGATGAGACC +
Preference number: 6 (lower is better)
Translates to: YIIYKLQPAVHV*ICHTAQGMDET
Trigger: GGTCTCATCCATGCCTTGGGCGGTATGGCAAATGCAAACATGAACTGCTGGTTGAAGCTTGTAGATTATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383779.8
ENST00000628377.2
CDS CAA 90 bp ATAACAAAAGGAATAGCTTCTATGCTGCTTGGGCGGGCAGAGAACTaGGTATATAATCTACAAGCTTCAACCGCTTGCTCATTCCTCATC +
Preference number: 6 (lower is better)
Translates to: ITKGIASMLLGRAEN*VYNLQASTACSFLI
Trigger: GATGAGGAATGAGCAAGCGGTTGAAGCTTGTAGATTATATACCAAGTTCTCTGCCCGCCCAAGCAGCATAGAAGCTATTCCTTTTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414979.1
CDS TCA 72 bp GATCCAAGACAAGGTATCATACATCAACTCACTATCTaGTCACCAGTGATTCACTCTACAAAATGGCAATGT +
Preference number: 6 (lower is better)
Translates to: DPRQGIIHQLTI*SPVIHSTKWQC
Trigger: ACATTGCCATTTTGTAGAGTGAATCACTGGTGATCAGATAGTGAGTTGATGTATGATACCTTGTCTTGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469454.1