RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HACE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000085382

Ensembl transcript IDs: ENST00000262903.9, ENST00000369125.6, ENST00000369127.8, ENST00000416605.6, ENST00000517424.1, ENST00000517995.5, ENST00000518228.1, ENST00000518402.5, ENST00000518503.5, ENST00000519645.5, ENST00000521962.1, ENST00000524020.1

Found 476 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATTCCCTTGTGCCAGTGGACAGATTTTCATAGCTCCCAGGTCCTaGAGGTTCAAATGGAGGAATGGAAGCAGCATCTTGATCTTGGCC +
Preference number: 1 (lower is better)
Translates to: RFPCASGQIFIAPRS*RFKWRNGSSILILA
Trigger: GGCCAAGATCAAGATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTATGAAAATCTGTCCACTGGCACAAGGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR CCA 90 bp ATCCTGACAATCTGCACTGGCTTCCTGTCTCCCTGCAAGAGCATCTaGTTTAGATTCCCTTGTGCCAGTGGACAGATTTTCATAGCTCCC +
Preference number: 1 (lower is better)
Translates to: ILTICTGFLSPCKSI*FRFPCASGQIFIAP
Trigger: GGGAGCTATGAAAATCTGTCCACTGGCACAAGGGAATCTAAACCAGATGCTCTTGCAGGGAGACAGGAAGCCAGTGCAGATTGTCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR CCA 90 bp GCCAGTGGACAGATTTTCATAGCTCCCAGGTCCTGGAGGTTCAAATaGAGGAATGGAAGCAGCATCTTGATCTTGGCCTTTTTGTTTCAG +
Preference number: 1 (lower is better)
Translates to: ASGQIFIAPRSWRFK*RNGSSILILAFLFQ
Trigger: CTGAAACAAAAAGGCCAAGATCAAGATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTATGAAAATCTGTCCACTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR TCA 90 bp TCAGCAAGGCTTGTTAGAATCTTTAGGTACTGGCTTTCACTTTGCTaGGACAAATGCTCCAGAACTTGCCGTAACATGTTTTCTCGGAGG +
Preference number: 1 (lower is better)
Translates to: SARLVRIFRYWLSLC*DKCSRTCRNMFSRR
Trigger: CCTCCGAGAAAACATGTTACGGCAAGTTCTGGAGCATTTGTCTCAGCAAAGTGAAAGCCAGTACCTAAAGATTCTAACAAGCCTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR CCA 90 bp CACATAAATCCAGAGGAGTTACTCCATTTTTATCTGGCAGATATTTaGCTCCTCGTAATAGTAGGATCTGTGCTGTATCTCTCTGACCAT +
Preference number: 1 (lower is better)
Translates to: HINPEELLHFYLADI*LLVIVGSVLYLSDH
Trigger: ATGGTCAGAGAGATACAGCACAGATCCTACTATTACGAGGAGCCAAATATCTGCCAGATAAAAATGGAGTAACTCCTCTGGATTTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR TCA 90 bp CTGCAATGTGAAGCAAGCTTCTTTTCACACGTCCGAATGCATAATTaGCATCAAATTTTGAATTTGATAGTAGTTCAGAAACAGACCTGT +
Preference number: 1 (lower is better)
Translates to: LQCEASFFSHVRMHN*HQILNLIVVQKQTC
Trigger: ACAGGTCTGTTTCTGAACTACTATCAAATTCAAAATTTGATGTCAATTATGCATTCGGACGTGTGAAAAGAAGCTTGCTTCACATTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521962.1
3UTR GCA 90 bp GTTAGTTCTAGACCCAGATCACTTATATCATTATCTAAAATCCATTaGAAATTTTTCGCATATTCTGGATCAATGGATGCCACATCTTGG +
Preference number: 1 (lower is better)
Translates to: VSSRPRSLISLSKIH*KFFAYSGSMDATSW
Trigger: CCAAGATGTGGCATCCATTGATCCAGAATATGCGAAAAATTTGCAATGGATTTTAGATAATGATATAAGTGATCTGGGTCTAGAACTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR TCA 90 bp CCATGTGGGACCCTGGAACTGCCCGTAACAAACTGTAAGAGAAGAACTCTCTCCGCAATTCCAGAGGCTTaGACACCTGGCTTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: PCGTLELPVTNCKRRTLSAIPEA*TPGFLE
Trigger: CTCCAAGAAGCCAGGTGTTCAAGCCTCTGGAATTGC...GGAGAGAGTTCTTCTCTTACAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR GCA 90 bp TTGACCAGCTGCCTGTGGTTCAACGCTAATCCCAAGATCTGCCCAGCAAACCGATGGAAGCATCAGCCCTaGCTATGGGTTGCATTTAGG +
Preference number: 2 (lower is better)
Translates to: LTSCLWFNANPKICPANRWKHQP*LWVAFR
Trigger: CCTAAATGCAACCCATAGGCAGGGCTGATGCTTCCA...TCGGTTTGCTGGGCAGATCTTGGGATTAGCGTTGAACCACAGGCAGCTGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR CCA 90 bp CCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCCCTCCTGGAGGTTCAAATaGAGGAATGGAAGCAGCATC +
Preference number: 2 (lower is better)
Translates to: PLPPMILANPPCGTLELPSWRFK*RNGSSI
Trigger: GATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGA...GGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CCA 90 bp AATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCATCAGCCCTGCCTATaGGTTGCATTTAGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: NPLPPMILANPPCGTLELHQPCL*VAFRLL
Trigger: AAGCAGCCTAAATGCAACCCATAGGCAGGGCTGATG...CAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR GCA 90 bp CCATGTGGGACCCTGGAACTGCCCGTAACAAACTGTAAGAGAAGAACTCTCTCCTGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: PCGTLELPVTNCKRRTLSCHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...GGAGAGAGTTCTTCTCTTACAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR GCA 90 bp CAATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTCATTCATCTAACGAGTaGCAAAGCAATTCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: QSTSTHDISKPTMWDPGTHSSNE*QSNSRG
Trigger: GCCTCTGGAATTGCTTTGGCACTCGTTAGATGAATG...AGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CCA 90 bp CCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCCCCATATTCTGGATCAATaGATGCCACATCTTGGTAAT +
Preference number: 2 (lower is better)
Translates to: PLPPMILANPPCGTLELPHILDQ*MPHLGN
Trigger: ATTACCAAGATGTGGCATCCATTGATCCAGAATATG...GGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR TCA 90 bp GCATTCCACCGATCCACAATTTGCTGCAATGTGAAGCAAGCTTCTTTTCACACGGAAACAGACCTGTGTTaGTCAGCCATAACCATTGGC +
Preference number: 2 (lower is better)
Translates to: AFHRSTICCNVKQASFHTETDLC*SAITIG
Trigger: GCCAATGGTTATGGCTGATCAACACAGGTCTGTTTC...CGTGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTGTGGATCGGTGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521962.1
3UTR-3UTR GCA 90 bp AATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAAATGCTCCAGAACTTaGCGTAACATGTTTTCTCGG +
Preference number: 2 (lower is better)
Translates to: NTPTPRFQRHLFHCSKHIKCSRT*RNMFSR
Trigger: CCGAGAAAACATGTTACGGCAAGTTCTGGAGCATTT...GATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CCA 90 bp GCCAGTGGACAGATTTTCATAGCTCCCAGGTCCTGGAGGTTCAAATGGAGGAATTATCTGGCAGATATTTaGCTCCTCGTAATAGTAGGA +
Preference number: 2 (lower is better)
Translates to: ASGQIFIAPRSWRFKWRNYLADI*LLVIVG
Trigger: TCCTACTATTACGAGGAGCCAAATATCTGCCAGATA...ATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTATGAAAATCTGTCCACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR CAA 90 bp TCACAAGAATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATaGCTCCAAACACATCAGTCTCAACAGAAAAAGTTAGTTCTAGAC +
Preference number: 2 (lower is better)
Translates to: SQEYSHPQVSKAPLP*LQTHQSQQKKLVLD
Trigger: GTCTAGAACTAACTTTTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATTCTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR GCA 90 bp CTTGGGTATTCAGGTAACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAATGGAAGCATCAGCCCTaGCTATGGGTTGCATTTAGG +
Preference number: 2 (lower is better)
Translates to: LGYSGNLSMLMHVLEVGKWKHQP*LWVAFR
Trigger: CCTAAATGCAACCCATAGGCAGGGCTGATGCTTCCA...TTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTTACCTGAATACCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR CCA 90 bp TCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTGTGTCACAAGCATCAGCCCTGCCTATaGGTTGCATTTAGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: SKFSNKLDVLRFIILCHKHQPCL*VAFRLL
Trigger: AAGCAGCCTAAATGCAACCCATAGGCAGGGCTGATG...CTTGTGACACAAAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR GCA 90 bp CAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAATGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: QVSKAPLPLLQTHQSQQKCHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...TTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGCAACACCTTGACCCATaGCTTCTTCTCCATGGAACC +
Preference number: 2 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRQHLDP*LLLHGT
Trigger: GGTTCCATGGAGAAGAAGGCATGGGTCAAGGTGTTG...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR GCA 90 bp ATTTCTTCTGCCCATTTCTTGCTGCCAAATGAAGGGGTGTACAGCCTGAAATATCGATCCACAATTTGCTaGAATGTGAAGCAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: ISSAHFLLPNEGVYSLKYRSTIC*NVKQAS
Trigger: AGAAGCTTGCTTCACATTGCAGCAAATTGTGGATCG...ATATTTCAGGCTGTACACCCCTTCATTTGGCAGCAAGAAATGGGCAGAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521962.1
3UTR-3UTR CCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTCATCAGCCCTGCCTATaGGTTGCATTTAGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: ILNITNPSVSISSCMHVPHQPCL*VAFRLL
Trigger: AAGCAGCCTAAATGCAACCCATAGGCAGGGCTGATG...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
3UTR-3UTR CCA 90 bp TGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATGGCACAGCAGCGATTGAGAGGCTTGAACACCTaGCTTCTTGGAGTTTTATTC +
Preference number: 2 (lower is better)
Translates to: CMCLKLVKDLEYMAQQRLRGLNT*LLGVLF
Trigger: GAATAAAACTCCAAGAAGCCAGGTGTTCAAGCCTCT...CAATCGCTGCTGTGCCATATACTCCAAATCTTTTACCAACTTCAAGCACATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR TCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAAACACACCAGCTGGATaGCCTCATATAATATATCAG +
Preference number: 2 (lower is better)
Translates to: TSAILNCASVVRGVFQTSNTPAG*PHIIYQ
Trigger: CTGATATATTATATGAGGTCATCCAGCTGGTGTGTT...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
3UTR-3UTR TCA 90 bp AATAGAATCTCTGTGAACCAGCAGGATATCATTTTCATTCACTGGCCTGTGCACGATATGCATGAATCTTaGCATCAACTCAGGACATTC +
Preference number: 2 (lower is better)
Translates to: NRISVNQQDIIFIHWPVHDMHES*HQLRTF
Trigger: GAATGTCCTGAGTTGATGTCAAGATTCATGCATATC...GTGCACAGGCCAGTGAATGAAAATGATATCCTGCTGGTTCACAGAGATTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR GCA 90 bp TTCAACTTACATGTCTCTCAAACATTACTGGCAAACACAATGACTGCTTATGAGCTGTCTAGCAAGCACTaGACTGTCTGTAATCCCAAC +
Preference number: 2 (lower is better)
Translates to: FNLHVSQTLLANTMTAYELSSKH*TVCNPN
Trigger: GTTGGGATTACAGACAGTGCAGTGCTTGCTAGACAG...CTCATAAGCAGTCATTGTGTTTGCCAGTAATGTTTGAGAGACATGTAAGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTATGCCTTCTTCTCCATaGAACCGTACAGCAATCCCT +
Preference number: 2 (lower is better)
Translates to: ILNITNPSVSISSCMHVPMPSSP*NRTAIP
Trigger: AGGGATTGCTGTACGGTTCCATGGAGAAGAAGGCAT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR TCA 90 bp TCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTGTGTCACAAGAACACACCAGCTGGATaGCCTCATATAATATATCAG +
Preference number: 2 (lower is better)
Translates to: SKFSNKLDVLRFIILCHKNTPAG*PHIIYQ
Trigger: CTGATATATTATATGAGGTCATCCAGCTGGTGTGTT...CTTGTGACACAAAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR TCA 90 bp AATAGAATCTCTGTGAACCAGCAGGATATCATTTTCATTCACTGGCCTGTGCACTACTGGCAAACACAATaGCTGCTTATGAGAAAATCT +
Preference number: 2 (lower is better)
Translates to: NRISVNQQDIIFIHWPVHYWQTQ*LLMRKS
Trigger: AGATTTTCTCATAAGCAGTCATTGTGTTTGCCAGTA...GTGCACAGGCCAGTGAATGAAAATGATATCCTGCTGGTTCACAGAGATTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR GCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTTGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPCHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
3UTR-3UTR TCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATCAATGGAGTTGCTCCTaGTACATTTGGCCTGTTAAT +
Preference number: 2 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYQWSCS*YIWPVN
Trigger: ATTAACAGGCCAAATGTATCAGGAGCAACTCCATTG...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR GCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCTGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: EKRETENLMILYKLEASACHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
3UTR-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRCHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
3UTR-3UTR TCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATAGGCTAAGCAGTTTATaGCCATTTGTTGTAGCAACT +
Preference number: 2 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYRLSSL*PFVVAT
Trigger: AGTTGCTACAACAAATGGTCATAAACTGCTTAGCCT...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR TCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATCCAATTCGAAAGACGTaGCAAAACATTCTCACAATC +
Preference number: 2 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYPIRKT*QNILTI
Trigger: GATTGTGAGAATGTTTTGTCACGTCTTTCGAATTGG...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR TCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTTACTGGCAAACACAATaGCTGCTTATGAGAAAATCT +
Preference number: 2 (lower is better)
Translates to: ILNITNPSVSISSCMHVPYWQTQ*LLMRKS
Trigger: AGATTTTCTCATAAGCAGTCATTGTGTTTGCCAGTA...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
3UTR-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTCCTGTTCAAACATATaGTGTAACTATTCAAGTACG +
Preference number: 2 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRSCSNI*CNYSST
Trigger: CGTACTTGAATAGTTACAGCATATGTTTGAACAGGA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
3UTR-3UTR CCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTAAAGAACACACCAGCTaGATGACCTCATATAATATA +
Preference number: 2 (lower is better)
Translates to: ILNITNPSVSISSCMHVPKEHTS*MTSYNI
Trigger: TATATTATATGAGGTCATCCAGCTGGTGTGTTCTTT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
3UTR-3UTR CCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAAAGAACACACCAGCTaGATGACCTCATATAATATA +
Preference number: 2 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRKEHTS*MTSYNI
Trigger: TATATTATATGAGGTCATCCAGCTGGTGTGTTCTTT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
3UTR-3UTR GCA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATTCCTGTTCAAACATATaGTGTAACTATTCAAGTACG +
Preference number: 2 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYSCSNI*CNYSST
Trigger: CGTACTTGAATAGTTACAGCATATGTTTGAACAGGA...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR CCA 72 bp TGTGCCAGTGGACAGATTTTCATAGCTCCCAGGTCCTaGAGGTTCAAATGGAGGAATGGAAGCAGCATCTTG +
Preference number: 3 (lower is better)
Translates to: CASGQIFIAPRS*RFKWRNGSSIL
Trigger: CAAGATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTATGAAAATCTGTCCACTGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CAA 90 bp CCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACACAAAGTACAATGGAGTaGCTCCTGATACATTTGGCC +
Preference number: 3 (lower is better)
Translates to: PPGFKGTSSIAPNTSVSTQSTME*LLIHLA
Trigger: GGCCAAATGTATCAGGAGCAACTCCATTGTACTTTG...TGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR CCA 72 bp CATAGCTCCCAGGTCCTGGAGGTTCAAATGGAGGAATaGAAGCAGCATCTTGATCTTGGCCTTTTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: HSSQVLEVQMEE*KQHLDLGLFVS
Trigger: TGAAACAAAAAGGCCAAGATCAAGATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CAA 90 bp AGTTTTCCAGACTTCATTATGCCATTGTGTAACCATAGCTGCCACAATGTAGTGCACGACGTCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 3 (lower is better)
Translates to: SFPDFIMPLCNHSCHNVVHDVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACGTCGTG...CACTACATTGTGGCAGCTATGGTTACACAATGGCATAATGAAGTCTGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CAA 90 bp TACAACTTCCCAGAACCACTGAATAACTGGATCTTCTCTTTCATAGCCACTTGTAGCAATTCCAGAGGCTaGAACACCTGGCTTCTTGGA +
Preference number: 3 (lower is better)
Translates to: YNFPEPLNNWIFSFIATCSNSRG*NTWLLG
Trigger: TCCAAGAAGCCAGGTGTTCAAGCCTCTGGAATTGCT...ACAAGTGGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CAA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCATTCTGCCATTCTGAATaGTGCATCAGTAGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: TSAILNCASVVRGVFQTSFCHSE*CISSQR
Trigger: CCTCTGACTACTGATGCACAATTCAGAATGGCAGAA...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
3UTR CCA 72 bp CCAGAGGAGTTACTCCATTTTTATCTGGCAGATATTTaGCTCCTCGTAATAGTAGGATCTGTGCTGTATCTC +
Preference number: 3 (lower is better)
Translates to: PEELLHFYLADI*LLVIVGSVLYL
Trigger: GAGATACAGCACAGATCCTACTATTACGAGGAGCCAAATATCTGCCAGATAAAAATGGAGTAACTCCTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CAA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTTTCTGCCATTCTGAATaGTGCATCAGTAGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: RETENLMILYKLEASALPFCHSE*CISSQR
Trigger: CCTCTGACTACTGATGCACAATTCAGAATGGCAGAA...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
3UTR-3UTR CAA 90 bp AGATTTGGAGTATATGGCACAGCAGCGATTGTAAAGTTTTGCAATCCACTTCCATTCTGCCATTCTGAATaGTGCATCAGTAGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: RFGVYGTAAIVKFCNPLPFCHSE*CISSQR
Trigger: CCTCTGACTACTGATGCACAATTCAGAATGGCAGAA...TGGAAGTGGATTGCAAAACTTTACAATCGCTGCTGTGCCATATACTCCAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR CAA 90 bp AGCAGTAGCTCCAATTCATATTCATCAAAAAGCTGTATGAGGGAGGGTGGAATGTTATCTGGCAGATATTaGGCTCCTCGTAATAGTAGG +
Preference number: 3 (lower is better)
Translates to: SSSSNSYSSKSCMREGGMLSGRY*APRNSR
Trigger: CCTACTATTACGAGGAGCCAAATATCTGCCAGATAA...CATTCCACCCTCCCTCATACAGCTTTTTGATGAATATGAATTGGAGCTACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR-3UTR CAA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCTTCTGCCATTCTGAATaGTGCATCAGTAGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: EKRETENLMILYKLEASAFCHSE*CISSQR
Trigger: CCTCTGACTACTGATGCACAATTCAGAATGGCAGAA...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
3UTR-3UTR CAA 90 bp TACAACTTCCCAGAACCACTGAATAACTGGATCTTCTCTTTCATAGCCACTTGTAATGGATGCCACATCTaGGTAATTTACAGGAATACC +
Preference number: 3 (lower is better)
Translates to: YNFPEPLNNWIFSFIATCNGCHI*VIYRNT
Trigger: GGTATTCCTGTAAATTACCAAGATGTGGCATCCATT...ACAAGTGGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR CAA 90 bp GCGCTATATTCTAATAATTTACTCATACATTTCTTCTGCCCATTTCTTGCTGCCAGAAACAGACCTGTGTaGATCAGCCATAACCATTGG +
Preference number: 3 (lower is better)
Translates to: ALYSNNLLIHFFCPFLAARNRPV*ISHNHW
Trigger: CCAATGGTTATGGCTGATCAACACAGGTCTGTTTCT...GGCAGCAAGAAATGGGCAGAAGAAATGTATGAGTAAATTATTAGAATATAGCGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521962.1
3UTR GCA 72 bp GACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGTTTTCCAGACTTCATT +
Preference number: 3 (lower is better)
Translates to: DIFPNYFCHSEL*ISSQRSFPDFI
Trigger: AATGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR-3UTR CAA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATAATGGATGCCACATCTaGGTAATTTACAGGAATACC +
Preference number: 3 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYNGCHI*VIYRNT
Trigger: GGTATTCCTGTAAATTACCAAGATGTGGCATCCATT...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR TCA 72 bp ACTTACATGTCTCTCAAACATTACTGGCAAACACAATaGCTGCTTATGAGAAAATCTGCATATGTCATTCTA +
Preference number: 3 (lower is better)
Translates to: TYMSLKHYWQTQ*LLMRKSAYVIL
Trigger: TAGAATGACATATGCAGATTTTCTCATAAGCAGTCATTGTGTTTGCCAGTAATGTTTGAGAGACATGTAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCGCTGCGAGGGCTGCCTaGGGCCACGTCCTGCGTCCG +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFAARAA*GHVLRP
Trigger: CGGACGCAGGACGTGGCCCCAGGCAGCCCTCGCAGC...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAGCTGCGAGGGCTGCCTaGGGCCACGTCCTGCGTCCG +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSAARAA*GHVLRP
Trigger: CGGACGCAGGACGTGGCCCCAGGCAGCCCTCGCAGC...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTACCCGCCGCCGCCTCTaGTCGCGCCTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPTRRRL*SRLSCS
Trigger: GCTGCAGGAAAGGCGCGAGCAGAGGCGGCGGCGGGT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000369125.6
CDS-3UTR GCA 90 bp CCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCCCGTAACAAACGTCAGGCGGTTGAGTTaGTCCATCGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: PMILANPPCGTLELPVTNVRRLS*SIALSI
Trigger: GATGGAGAGAGCGATGGAGCAACTCAACCGCCTGAC...GTTTGTTACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp ATCCACAATTTGCTGCAATGTGAAGCAAGCTTCTTTTCACACGTCCGAATGCATTCATCTCTGCCGGGGTaGGAGCGTCGGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: IHNLLQCEASFFSHVRMHSSLPG*ERRARG
Trigger: TCCCCTGGCCCGACGCTCCCACCCCGGCAGAGATGA...ATGCATTCGGACGTGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTGCTCGCGCCTTTCCTaGAGCCCCCGCCGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRCSRLS*SPRRRV
Trigger: GACGCGGCGGCGGGGGCTGCAGGAAAGGCGCGAGCA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000369125.6
CDS-3UTR GCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCTGCTCGCGCCTTTCCTaGAGCCCCCGCCGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASACSRLS*SPRRRV
Trigger: GACGCGGCGGCGGGGGCTGCAGGAAAGGCGCGAGCA...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000369125.6
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGACCCGCCGCCGCCTCTaGTCGCGCCTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALTRRRL*SRLSCS
Trigger: GCTGCAGGAAAGGCGCGAGCAGAGGCGGCGGCGGGT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000369125.6
CDS-3UTR GCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATCGGGGGCCGGGCTGCTaGCGGACCGACCACCTACAG +
Preference number: 4 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYRGPGC*RTDHLQ
Trigger: CTGTAGGTGGTCGGTCCGGCAGCAGCCCGGCCCCCG...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGGTCCGGGGGCCGGGCTaGTGCCGGACCGACCACCTA +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRVRGPG*CRTDHL
Trigger: TAGGTGGTCGGTCCGGCAGCAGCCCGGCCCCCGGAC...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATGTCCGGGGGCCGGGCTaGTGCCGGACCGACCACCTA +
Preference number: 4 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYVRGPG*CRTDHL
Trigger: TAGGTGGTCGGTCCGGCAGCAGCCCGGCCCCCGGAC...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp TTCAACTTACATGTCTCTCAAACATTACTGGCAAACACAATGACTGCTTATGAGGCTGCGAGGGCTGCCTaGGGCCACGTCCTGCGTCCG +
Preference number: 4 (lower is better)
Translates to: FNLHVSQTLLANTMTAYEAARAA*GHVLRP
Trigger: CGGACGCAGGACGTGGCCCCAGGCAGCCCTCGCAGC...CTCATAAGCAGTCATTGTGTTTGCCAGTAATGTTTGAGAGACATGTAAGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp TTGACCAGCTGCCTGTGGTTCAACGCTAATCCCAAGATCTGCCCAGCAAACCGACTGTCTAGCAAGCACTaGACTGTCTGTAATCCCAAC +
Preference number: 4 (lower is better)
Translates to: LTSCLWFNANPKICPANRLSSKH*TVCNPN
Trigger: GTTGGGATTACAGACAGTGCAGTGCTTGCTAGACAG...TCGGTTTGCTGGGCAGATCTTGGGATTAGCGTTGAACCACAGGCAGCTGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTGCCCTACATCTCGCCTaGGCCCGTCCAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPALHLA*ARPAGG
Trigger: TCCGCCTGCTGGACGGGCCCAGGCGAGATGTAGGGC...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp CCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCCCGTAACAAACCATCAGCCCTGCCTATaGGTTGCATTTAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PMILANPPCGTLELPVTNHQPCL*VAFRLL
Trigger: AAGCAGCCTAAATGCAACCCATAGGCAGGGCTGATG...GTTTGTTACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAAGCGCGTCAGGCGGTTaGGTTGCTCCATCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSSASGG*VAPSLS
Trigger: AGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCT...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAGCGCGTCAGGCGGTTaGGTTGCTCCATCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFSASGG*VAPSLS
Trigger: AGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCT...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp CAATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGGCTTCCTGTCTCCCTaGAAGAGCATCTGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: QSTSTHDISKPTMWDPGTGFLSP*KSIWFR
Trigger: TCTAAACCAGATGCTCTTGCAGGGAGACAGGAAGCC...AGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp CCTTGTGCCAGTGGACAGATTTTCATAGCTCCCAGGTCCTGGAGGTTCAAATGGTCATTCACTGGCCTGTaGACCATATCTGAATCTGGC +
Preference number: 4 (lower is better)
Translates to: PCASGQIFIAPRSWRFKWSFTGL*TISESG
Trigger: GCCAGATTCAGATATGGTGCACAGGCCAGTGAATGA...CCATTTGAACCTCCAGGACCTGGGAGCTATGAAAATCTGTCCACTGGCACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp CAATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTTGGAAGCATCAGCCCTaGCTATGGGTTGCATTTAGG +
Preference number: 4 (lower is better)
Translates to: QSTSTHDISKPTMWDPGTWKHQP*LWVAFR
Trigger: CCTAAATGCAACCCATAGGCAGGGCTGATGCTTCCA...AGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGCCCTACATCTCGCCTaGGCCCGTCCAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVALHLA*ARPAGG
Trigger: TCCGCCTGCTGGACGGGCCCAGGCGAGATGTAGGGC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp CCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACATTGACCAGCTGCCTGTaGTTCAACGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: PPGFKGTSSIAPNTSVSTLTSCL*FNANPK
Trigger: CTTGGGATTAGCGTTGAACCACAGGCAGCTGGTCAA...TGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp CAATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTCATCAGCCCTGCCTATaGGTTGCATTTAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QSTSTHDISKPTMWDPGTHQPCL*VAFRLL
Trigger: AAGCAGCCTAAATGCAACCCATAGGCAGGGCTGATG...AGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCTTCTGCCCATTTCTTaGTGCCAAATGAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: NPLPPMILANPPCGTLELLLPIS*CQMKGC
Trigger: ACACCCCTTCATTTGGCAGCAAGAAATGGGCAGAAG...CAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp CAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAATTCTGGCAGGCAACATaGAGTGCTGTCTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: QVSKAPLPLLQTHQSQQKFWQAT*SAVCPM
Trigger: CATGGGGCAGACAGCACTGCATGTTGCCTGCCAGAA...TTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp CCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACATCATTCACTGGCCTGTaGACCATATCTGAATCTGGC +
Preference number: 4 (lower is better)
Translates to: PPGFKGTSSIAPNTSVSTSFTGL*TISESG
Trigger: GCCAGATTCAGATATGGTGCACAGGCCAGTGAATGA...TGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGGCACCTCTTCCATTaGTCCAAACACATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NTPTPRFQRHLFHCSKHIRHLFH*SKHISL
Trigger: GAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCT...GATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGAGGCACCTCTTCCATTaGTCCAAACACATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NPLPPMILANPPCGTLELRHLFH*SKHISL
Trigger: GAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCT...CAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp CTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCCCGTATTGTGTAACCATAGCTaGCACAATGTAGTGCCACAA +
Preference number: 4 (lower is better)
Translates to: LPPMILANPPCGTLELPVLCNHS*HNVVPQ
Trigger: TTGTGGCACTACATTGTGGCAGCTATGGTTACACAA...TACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp CTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCCCGTATGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LPPMILANPPCGTLELPVCHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...TACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCTCCTGGAGGTTCAAATaGAGGAATGGAAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: NTPTPRFQRHLFHCSKHISWRFK*RNGSSI
Trigger: GATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGA...GATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGTCCTGGAGGTTCAAATaGAGGAATGGAAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: NPLPPMILANPPCGTLELSWRFK*RNGSSI
Trigger: GATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGA...CAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAAGCAAACCCACCATGTaGGACCCTGGAACTGCCCGT +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSSKPTM*DPGTAR
Trigger: ACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCT...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp AAAAATAGAATCTCTGTGAACCAGCAGGATATCATTTTCATTCACTGGCCTGTGAGCGCGTCAGGCGGTTaGGTTGCTCCATCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KNRISVNQQDIIFIHWPVSASGG*VAPSLS
Trigger: AGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCT...CACAGGCCAGTGAATGAAAATGATATCCTGCTGGTTCACAGAGATTCTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp CCACCGATCCACAATTTGCTGCAATGTGAAGCAAGCTTCTTTTCACACGTCCGATTTCTTGCTGCCAAATaGAGGGGTGTACAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PPIHNLLQCEASFFSHVRFLAAK*RGVQPE
Trigger: TTCAGGCTGTACACCCCTTCATTTGGCAGCAAGAAA...TCGGACGTGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTGTGGATCGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR TCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCTGCACTGTCGTCTTGTaGCCGTTCTGGCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFCTVVL*PFWQAT
Trigger: TGTTGCCTGCCAGAACGGTCACAAGACGACAGTGCA...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000369125.6
CDS-3UTR TCA 90 bp TTGACCAGCTGCCTGTGGTTCAACGCTAATCCCAAGATCTGCCCAGCAAACCGACCAATTCGAAAGACGTaGCAAAACATTCTCACAATC +
Preference number: 4 (lower is better)
Translates to: LTSCLWFNANPKICPANRPIRKT*QNILTI
Trigger: GATTGTGAGAATGTTTTGTCACGTCTTTCGAATTGG...TCGGTTTGCTGGGCAGATCTTGGGATTAGCGTTGAACCACAGGCAGCTGGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp CCATGTGGGACCCTGGAACTGCCCGTAACAAACTGTAAGAGAAGAACTCTCTCCAAATGCTCCAGAACTTaGCGTAACATGTTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: PCGTLELPVTNCKRRTLSKCSRT*RNMFSR
Trigger: CCGAGAAAACATGTTACGGCAAGTTCTGGAGCATTT...GGAGAGAGTTCTTCTCTTACAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp AGTAGCTCCAATTCATATTCATCAAAAAGCTGTATGAGGGAGGGTGGAATGAACAGCAAACCCACCATGTaGGACCCTGGAACTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SSSNSYSSKSCMREGGMNSKPTM*DPGTAR
Trigger: ACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCT...GTTCATTCCACCCTCCCTCATACAGCTTTTTGATGAATATGAATTGGAGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp CCATGTGGGACCCTGGAACTGCCCGTAACAAACTGTAAGAGAAGAACTCTCTCCAACACACCAGCTGGATaGCCTCATATAATATATCAG +
Preference number: 4 (lower is better)
Translates to: PCGTLELPVTNCKRRTLSNTPAG*PHIIYQ
Trigger: CTGATATATTATATGAGGTCATCCAGCTGGTGTGTT...GGAGAGAGTTCTTCTCTTACAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGGCAGGCAACATGCAGTaGTGTCTGCCCCATGGCATC +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALAGNMQ*CLPHGI
Trigger: GATGCCATGGGGCAGACAGCACTGCATGTTGCCTGC...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp CAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAAAACATCCTGACAATCTaGACTGGCTTCCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QVSKAPLPLLQTHQSQQKNILTI*TGFLSP
Trigger: GGGAGACAGGAAGCCAGTGCAGATTGTCAGGATGTT...TTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGAGCAAACCCACCATGTaGGACCCTGGAACTGCCCGT +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALSKPTM*DPGTAR
Trigger: ACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTAGCAAACCCACCATGTaGGACCCTGGAACTGCCCGT +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPSKPTM*DPGTAR
Trigger: ACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCT...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTGCACTGTCGTCTTGTaGCCGTTCTGGCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSCTVVL*PFWQAT
Trigger: TGTTGCCTGCCAGAACGGTCACAAGACGACAGTGCA...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000369125.6
CDS-3UTR TCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTGCAATTCCAGAGGCTTaGACACCTGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPAIPEA*TPGFLE
Trigger: CTCCAAGAAGCCAGGTGTTCAAGCCTCTGGAATTGC...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp CAATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGATATGCATGAATCTTaGCATCAACTCAGGACATTC +
Preference number: 4 (lower is better)
Translates to: QSTSTHDISKPTMWDPGTDMHES*HQLRTF
Trigger: GAATGTCCTGAGTTGATGTCAAGATTCATGCATATC...AGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp AAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAAAAGTTAGTTCACGCACAACACCTTaGCCCATGCCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGTSSIAPNTSVSTEKVSSRTTP*PMPSSP
Trigger: TGGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGA...ACTAACTTTTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp GTCACAAGAATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAATGCATAATCAGGATTaGCTATCTCATTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: VTRILPPPGFKGTSSIAPMHNQD*LSHWTE
Trigger: TTCTGTCCAATGAGATAGTCAATCCTGATTATGCAT...TGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATTCTTGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp CCATGTGGGACCCTGGAACTGCCCGTAACAAACTGTAAGAGAAGAACTCTCTCCATGCATAATCAGGATTaGCTATCTCATTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: PCGTLELPVTNCKRRTLSMHNQD*LSHWTE
Trigger: TTCTGTCCAATGAGATAGTCAATCCTGATTATGCAT...GGAGAGAGTTCTTCTCTTACAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGGTCAGGCGGTTGAGTTaGTCCATCGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALVRRLS*SIALSI
Trigger: GATGGAGAGAGCGATGGAGCAACTCAACCGCCTGAC...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTACATGCAGTGCTGTCTaGCCCATGGCATCCTCAACA +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPTCSAV*PMASST
Trigger: TGTTGAGGATGCCATGGGGCAGACAGCACTGCATGT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGCAGGCAACATGCAGTaGTGTCTGCCCCATGGCATC +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVAGNMQ*CLPHGI
Trigger: GATGCCATGGGGCAGACAGCACTGCATGTTGCCTGC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp TTCAACTTACATGTCTCTCAAACATTACTGGCAAACACAATGACTGCTTATGAGGCAGGCAACATGCAGTaGTGTCTGCCCCATGGCATC +
Preference number: 4 (lower is better)
Translates to: FNLHVSQTLLANTMTAYEAGNMQ*CLPHGI
Trigger: GATGCCATGGGGCAGACAGCACTGCATGTTGCCTGC...CTCATAAGCAGTCATTGTGTTTGCCAGTAATGTTTGAGAGACATGTAAGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp TGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATGGCACAGCAGCGATTGAACATCCTGACAATCTaGACTGGCTTCCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: CMCLKLVKDLEYMAQQRLNILTI*TGFLSP
Trigger: GGGAGACAGGAAGCCAGTGCAGATTGTCAGGATGTT...CAATCGCTGCTGTGCCATATACTCCAAATCTTTTACCAACTTCAAGCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCTGGAAGCATCAGCCCTaGCTATGGGTTGCATTTAGG +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFWKHQP*LWVAFR
Trigger: CCTAAATGCAACCCATAGGCAGGGCTGATGCTTCCA...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTGTGCTGTCTGCCCCATaGCATCCTCAACATCAACAT +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIVLSAP*HPQHQH
Trigger: ATGTTGATGTTGAGGATGCCATGGGGCAGACAGCAC...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTTTGACCAGCTGCCTGTaGTTCAACGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCILTSCL*FNANPK
Trigger: CTTGGGATTAGCGTTGAACCACAGGCAGCTGGTCAA...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp AGCAGTAGCTCCAATTCATATTCATCAAAAAGCTGTATGAGGGAGGGTGGAATGTTGACCAGCTGCCTGTaGTTCAACGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SSSSNSYSSKSCMREGGMLTSCL*FNANPK
Trigger: CTTGGGATTAGCGTTGAACCACAGGCAGCTGGTCAA...CATTCCACCCTCCCTCATACAGCTTTTTGATGAATATGAATTGGAGCTACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTTCAGTAACAAGCTaGACGTACTCCGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: NTPTPRFQRHLFHCSKHISSVTS*TYSALL
Trigger: TAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACT...GATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp CAATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTAGTTCAGTAACAAGCTaGACGTACTCCGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: QSTSTHDISKPTMWDPGTSSVTS*TYSALL
Trigger: TAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACT...AGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGCAAACCCACCATGTaGGACCCTGGAACTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVSKPTM*DPGTAR
Trigger: ACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCACATCAGCCCTGCCTATaGGTTGCATTTAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSHQPCL*VAFRLL
Trigger: AAGCAGCCTAAATGCAACCCATAGGCAGGGCTGATG...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTCATCAGCCCTGCCTATaGGTTGCATTTAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIHQPCL*VAFRLL
Trigger: AAGCAGCCTAAATGCAACCCATAGGCAGGGCTGATG...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTAGTTCAGTAACAAGCTaGACGTACTCCGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCISSVTS*TYSACA
Trigger: AGCACAGGCGGAGTACGTCCAGCTTGTTACTGAACT...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369125.6
3UTR CAA 72 bp TACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATaGCTCCAAACACATCAGTCTCAACAGAAAAAGTTA +
Preference number: 4 (lower is better)
Translates to: YSHPQVSKAPLP*LQTHQSQQKKL
Trigger: TAACTTTTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCGAAACAGACCTGTGTTaGTCAGCCATAACCATTGGC +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFETDLC*SAITIG
Trigger: GCCAATGGTTATGGCTGATCAACACAGGTCTGTTTC...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp TCATACATTTCTTCTGCCCATTTCTTGCTGCCAAATGAAGGGGTGTACAGCCTGAAGGGGTGTACAGCCTaGAATATCTTGATAGTTAGG +
Preference number: 4 (lower is better)
Translates to: SYISSAHFLLPNEGVYSLKGCTA*NILIVR
Trigger: CCTAACTATCAAGATATTTCAGGCTGTACACCCCTT...CAGGCTGTACACCCCTTCATTTGGCAGCAAGAAATGGGCAGAAGAAATGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR TCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGGCAATTCCAGAGGCTTaGACACCTGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALAIPEA*TPGFLE
Trigger: CTCCAAGAAGCCAGGTGTTCAAGCCTCTGGAATTGC...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTTTCAATGAAACGAGGTaGAGTCATTCCCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIFNETR*SHSRRH
Trigger: ATGCCTCCGGGAATGACTTCACCTCGTTTCATTGAA...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp TGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATGGCACAGCAGCGATTGTTCAATGAAACGAGGTaGAGTCATTCCCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: CMCLKLVKDLEYMAQQRLFNETR*SHSRRH
Trigger: ATGCCTCCGGGAATGACTTCACCTCGTTTCATTGAA...CAATCGCTGCTGTGCCATATACTCCAAATCTTTTACCAACTTCAAGCACATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp TTGAGTAATGTCTTCTACAACTTCCCAGAACCACTGAATAACTGGATCTTCTCTTCACGCACAACACCTTaGCCCATGCCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSNVFYNFPEPLNNWIFSSRTTP*PMPSSP
Trigger: TGGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGA...AGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGTTGTAGAAGACATTACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGTCACGCACAACACCTTaGCCCATGCCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALSRTTP*PMPSSP
Trigger: TGGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGA...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp GCCAGTGGACAGATTTTCATAGCTCCCAGGTCCTGGAGGTTCAAATGGAGGAATTACTGGCAAACACAATaGCTGCTTATGAGAAAATCT +
Preference number: 4 (lower is better)
Translates to: ASGQIFIAPRSWRFKWRNYWQTQ*LLMRKS
Trigger: AGATTTTCTCATAAGCAGTCATTGTGTTTGCCAGTA...ATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTATGAAAATCTGTCCACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATCGTCTCTACGTCTTGTaGCCGTTCTGGCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYRLYVL*PFWQAT
Trigger: TGTTGCCTGCCAGAACGGTCACAAGACGTAGAGACG...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp CAGCGCTATATTCTAATAATTTACTCATACATTTCTTCTGCCCATTTCTTGCTGAGGGTGCGGATCACTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: QRYILIIYSYISSAHFLLRVRIT*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAGTGATCCGCACCCT...CAGCAAGAAATGGGCAGAAGAAATGTATGAGTAAATTATTAGAATATAGCGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR GCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCGTCAGGCGGTTGAGTTaGTCCATCGCTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAVRRLS*SIALSI
Trigger: GATGGAGAGAGCGATGGAGCAACTCAACCGCCTGAC...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCACTGCCCATTTCTTGCTaGCAAATGAAGGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSLPISC*QMKGCT
Trigger: TGTACACCCCTTCATTTGGCAGCAAGAAATGGGCAG...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp CCTTTCTTTAACAGCAAAACCAAGCATTCCACCGATCCACAATTTGCTGCAATGCTGCCCATTTCTTGCTaGCAAATGAAGGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: PFFNSKTKHSTDPQFAAMLPISC*QMKGCT
Trigger: TGTACACCCCTTCATTTGGCAGCAAGAAATGGGCAG...CATTGCAGCAAATTGTGGATCGGTGGAATGCTTGGTTTTGCTGTTAAAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR GCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTCTTCTGCCCATTTCTTaGTGCCAAATGAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCILLPIS*CQMKGC
Trigger: ACACCCCTTCATTTGGCAGCAAGAAATGGGCAGAAG...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCACTTCTGCCCATTTCTTaGTGCCAAATGAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSLLPIS*CQMKGC
Trigger: ACACCCCTTCATTTGGCAGCAAGAAATGGGCAGAAG...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp ATCCACAATTTGCTGCAATGTGAAGCAAGCTTCTTTTCACACGTCCGAATGCATCTTCTGCCCATTTCTTaGTGCCAAATGAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: IHNLLQCEASFFSHVRMHLLPIS*CQMKGC
Trigger: ACACCCCTTCATTTGGCAGCAAGAAATGGGCAGAAG...ATGCATTCGGACGTGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGACATGCAGTGCTGTCTaGCCCATGGCATCCTCAACA +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALTCSAV*PMASST
Trigger: TGTTGAGGATGCCATGGGGCAGACAGCACTGCATGT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp TTCAACTTACATGTCTCTCAAACATTACTGGCAAACACAATGACTGCTTATGAGTTCTGGCAGGCAACATaGAGTGCTGTCTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: FNLHVSQTLLANTMTAYEFWQAT*SAVCPM
Trigger: CATGGGGCAGACAGCACTGCATGTTGCCTGCCAGAA...CTCATAAGCAGTCATTGTGTTTGCCAGTAATGTTTGAGAGACATGTAAGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCTTCTGGCAGGCAACATaGAGTGCTGTCTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVFWQAT*SAVCPM
Trigger: CATGGGGCAGACAGCACTGCATGTTGCCTGCCAGAA...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp TCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTGTGTCACAAGCAACACCTTGACCCATaGCTTCTTCTCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: SKFSNKLDVLRFIILCHKQHLDP*LLLHGT
Trigger: GGTTCCATGGAGAAGAAGGCATGGGTCAAGGTGTTG...CTTGTGACACAAAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTCAACACCTTGACCCATaGCTTCTTCTCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPQHLDP*LLLHGT
Trigger: GGTTCCATGGAGAAGAAGGCATGGGTCAAGGTGTTG...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp CCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACATTCTGGATCAATGGATaGCACATCTTGGTAATTTAC +
Preference number: 4 (lower is better)
Translates to: PPGFKGTSSIAPNTSVSTFWING*HILVIY
Trigger: GTAAATTACCAAGATGTGGCATCCATTGATCCAGAA...TGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCTTCTGGATCAATGGATaGCACATCTTGGTAATTTAC +
Preference number: 4 (lower is better)
Translates to: NTPTPRFQRHLFHCSKHIFWING*HILVIY
Trigger: GTAAATTACCAAGATGTGGCATCCATTGATCCAGAA...GATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGTGCTGCACAAGGTCATaGAGTAGTTCTGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALCCTRS*SSSVRP
Trigger: TGGGCGGACAGAACTACTCCATGACCTTGTGCAGCA...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTTGCTGCACAAGGTCATaGAGTAGTTCTGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPCCTRS*SSSVRP
Trigger: TGGGCGGACAGAACTACTCCATGACCTTGTGCAGCA...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp CTTGGGTATTCAGGTAACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAGTGCTGTCTGCCCCATaGCATCCTCAACATCAACAT +
Preference number: 4 (lower is better)
Translates to: LGYSGNLSMLMHVLEVGKVLSAP*HPQHQH
Trigger: ATGTTGATGTTGAGGATGCCATGGGGCAGACAGCAC...TTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTTACCTGAATACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAATTACTGGGGGAGGATaGACCAATTCGAAAGACGTG +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSITGGG*TNSKDV
Trigger: CACGTCTTTCGAATTGGTCCATCCTCCCCCAGTAAT...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCTCCTGGAGGTTCAAATaGAGGAATGGAAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFSWRFK*RNGSSI
Trigger: GATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGA...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAATAGCTCCCAGGTCCTaGAGGTTCAAATGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSIAPRS*RFKWRN
Trigger: ATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTAT...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTCCCTGCAAGAGCATCTaGTTTAGATTCCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPPCKSI*FRFPCA
Trigger: GGCACAAGGGAATCTAAACCAGATGCTCTTGCAGGG...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCATGCCTTCTTCTCCATaGAACCGTACAGCAATCCCT +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFMPSSP*NRTAIP
Trigger: AGGGATTGCTGTACGGTTCCATGGAGAAGAAGGCAT...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATAGCAAACCCACCATGTaGGACCCTGGAACTGCCCGT +
Preference number: 4 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYSKPTM*DPGTAR
Trigger: ACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCT...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp CAATCCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTAAGATTTGGAGTATATaGCACAGCAGCGATTGTAAA +
Preference number: 4 (lower is better)
Translates to: QSTSTHDISKPTMWDPGTKIWSI*HSSDCK
Trigger: TTTACAATCGCTGCTGTGCCATATACTCCAAATCTT...AGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
3UTR CAA 72 bp CTCCATGGAACCGTACAGCAATCCCTTGCTTTAGCTTaGCACAATTTGCTTTTGACACAACTTCACAGCTAC +
Preference number: 4 (lower is better)
Translates to: LHGTVQQSLALA*HNLLLTQLHSY
Trigger: GTAGCTGTGAAGTTGTGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGGATTGCTGTACGGTTCCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTCAACATCAACATCACTaGCATGCTGCACAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIQHQHH*HAAQGH
Trigger: ATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTG...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCGCAATTCCAGAGGCTTaGACACCTGGCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAAIPEA*TPGFLE
Trigger: CTCCAAGAAGCCAGGTGTTCAAGCCTCTGGAATTGC...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTCACGCACAACACCTTaGCCCATGCCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRSRTTP*PMPSSP
Trigger: TGGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCTCACGCACAACACCTTaGCCCATGCCTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASASRTTP*PMPSSP
Trigger: TGGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGA...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp AGTTTTCCAGACTTCATTATGCCATTGTGTAACCATAGCTGCCACAATGTAGTGCTGCCCATTTCTTGCTaGCAAATGAAGGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: SFPDFIMPLCNHSCHNVVLPISC*QMKGCT
Trigger: TGTACACCCCTTCATTTGGCAGCAAGAAATGGGCAG...CACTACATTGTGGCAGCTATGGTTACACAATGGCATAATGAAGTCTGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCTCAACATCACTGACATaGTGCACAAGGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFSTSLT*CTRSWS
Trigger: ACTCCATGACCTTGTGCAGCATGTCAGTGATGTTGA...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTGGCTTCCTGTCTCCCTaGAAGAGCATCTGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPGFLSP*KSIWFR
Trigger: TCTAAACCAGATGCTCTTGCAGGGAGACAGGAAGCC...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTGGCTTCCTGTCTCCCTaGAAGAGCATCTGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSGFLSP*KSIWFR
Trigger: TCTAAACCAGATGCTCTTGCAGGGAGACAGGAAGCC...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGAACATCCTGACAATCTaGACTGGCTTCCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALNILTI*TGFLSP
Trigger: GGGAGACAGGAAGCCAGTGCAGATTGTCAGGATGTT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTTCATTCACTGGCCTGTaGACCATATCTGAATCTGGC +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPSFTGL*TISESG
Trigger: GCCAGATTCAGATATGGTGCACAGGCCAGTGAATGA...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518503.5
CDS-3UTR GCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTAGGCACCTCTTCCATTaGTCCAAACACATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPRHLFH*SKHISL
Trigger: GAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTGGAAGCATCAGCCCTaGCTATGGGTTGCATTTAGG +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSWKHQP*LWVAFR
Trigger: CCTAAATGCAACCCATAGGCAGGGCTGATGCTTCCA...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp AAAAATAGAATCTCTGTGAACCAGCAGGATATCATTTTCATTCACTGGCCTGTGTGGAAGCATCAGCCCTaGCTATGGGTTGCATTTAGG +
Preference number: 4 (lower is better)
Translates to: KNRISVNQQDIIFIHWPVWKHQP*LWVAFR
Trigger: CCTAAATGCAACCCATAGGCAGGGCTGATGCTTCCA...CACAGGCCAGTGAATGAAAATGATATCCTGCTGGTTCACAGAGATTCTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCTGCTGCACAAGGTCATaGAGTAGTTCTGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVCCTRS*SSSVRP
Trigger: TGGGCGGACAGAACTACTCCATGACCTTGTGCAGCA...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATAGCTCCCAGGTCCTaGAGGTTCAAATGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPIAPRS*RFKWRN
Trigger: ATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTAT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp GATTGTAAAGTTTTGCAATCCACTTCCACCCATGATATTAGCAAACCCACCATGATAGCTCCCAGGTCCTaGAGGTTCAAATGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: DCKVLQSTSTHDISKPTMIAPRS*RFKWRN
Trigger: ATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTAT...CATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTGCAAAACTTTACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTCCCTGCAAGAGCATCTaGTTTAGATTCCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPPCKSI*FRFPCA
Trigger: GGCACAAGGGAATCTAAACCAGATGCTCTTGCAGGG...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGCCTTCTTCTCCATaGAACCGTACAGCAATCCCT +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPMPSSP*NRTAIP
Trigger: AGGGATTGCTGTACGGTTCCATGGAGAAGAAGGCAT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTGACCAGCTGCCTGTaGTTCAACGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSLTSCL*FNANPK
Trigger: CTTGGGATTAGCGTTGAACCACAGGCAGCTGGTCAA...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTCTGTATGAGGGAGGGTaGAATGAACATATGAAAGCC +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCILYEGG*NEHMKA
Trigger: GGCTTTCATATGTTCATTCCACCCTCCCTCATACAG...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTAAGGGGTGTACAGCCTaGAATATCTTGATAGTTAGG +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIKGCTA*NILIVR
Trigger: CCTAACTATCAAGATATTTCAGGCTGTACACCCCTT...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGTTTCTTGCTGCCAAATaGAGGGGTGTACAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALFLAAK*RGVQPE
Trigger: TTCAGGCTGTACACCCCTTCATTTGGCAGCAAGAAA...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp CTCACATCAATTTCTGGCATGCCAGAAAGCAGTAGCTCCAATTCATATTCATCACAACATCAACATCACTaGCATGCTGCACAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LTSISGMPESSSSNSYSSQHQHH*HAAQGH
Trigger: ATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTG...TGATGAATATGAATTGGAGCTACTGCTTTCTGGCATGCCAGAAATTGATGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGTTCAATGAAACGAGGTaGAGTCATTCCCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALFNETR*SHSRRH
Trigger: ATGCCTCCGGGAATGACTTCACCTCGTTTCATTGAA...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp CAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAAGATATGCATGAATCTTaGCATCAACTCAGGACATTC +
Preference number: 4 (lower is better)
Translates to: QVSKAPLPLLQTHQSQQKDMHES*HQLRTF
Trigger: GAATGTCCTGAGTTGATGTCAAGATTCATGCATATC...TTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp AATAGAATCTCTGTGAACCAGCAGGATATCATTTTCATTCACTGGCCTGTGCACAGTTGTTCCATCAGCTaGCTGGGTAAACAATGCATA +
Preference number: 4 (lower is better)
Translates to: NRISVNQQDIIFIHWPVHSCSIS*LGKQCI
Trigger: TATGCATTGTTTACCCAGTCAGCTGATGGAACAACT...GTGCACAGGCCAGTGAATGAAAATGATATCCTGCTGGTTCACAGAGATTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCGAGTTGCTATTAGGCTaGAAAGTTGTTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFELLLG*KVVPSA
Trigger: AGCTGATGGAACAACTTTTCAGCCTAATAGCAACTC...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp ATTTGGAGTATATGGCACAGCAGCGATTGTAAAGTTTTGCAATCCACTTCCACCGAGTTGCTATTAGGCTaGAAAGTTGTTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: IWSIWHSSDCKVLQSTSTELLLG*KVVPSA
Trigger: AGCTGATGGAACAACTTTTCAGCCTAATAGCAACTC...GGTGGAAGTGGATTGCAAAACTTTACAATCGCTGCTGTGCCATATACTCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp GATTGTAAAGTTTTGCAATCCACTTCCACCCATGATATTAGCAAACCCACCATGACAGCTACTCCTCTGTaGACCAGCAGGATATCATTT +
Preference number: 4 (lower is better)
Translates to: DCKVLQSTSTHDISKPTMTATPL*TSRISF
Trigger: AAATGATATCCTGCTGGTTCACAGAGGAGTAGCTGT...CATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTGCAAAACTTTACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517424.1
CDS-3UTR GCA 90 bp AATAGAATCTCTGTGAACCAGCAGGATATCATTTTCATTCACTGGCCTGTGCACCGATCCACAATTTGCTaGAATGTGAAGCAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NRISVNQQDIIFIHWPVHRSTIC*NVKQAS
Trigger: AGAAGCTTGCTTCACATTGCAGCAAATTGTGGATCG...GTGCACAGGCCAGTGAATGAAAATGATATCCTGCTGGTTCACAGAGATTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCTGCCCATTTCTTGCTaGCAAATGAAGGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALLPISC*QMKGCT
Trigger: TGTACACCCCTTCATTTGGCAGCAAGAAATGGGCAG...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp AGATTTGGAGTATATGGCACAGCAGCGATTGTAAAGTTTTGCAATCCACTTCCAACATCACTGACATGCTaGACAAGGTCATGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RFGVYGTAAIVKFCNPLPTSLTC*TRSWSS
Trigger: ACTACTCCATGACCTTGTGCAGCATGTCAGTGATGT...TGGAAGTGGATTGCAAAACTTTACAATCGCTGCTGTGCCATATACTCCAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp GCTCTTGTCATTCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTCAACATCACTGACATaGTGCACAAGGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: ALVIRSSVTSWTYSALLFSTSLT*CTRSWS
Trigger: ACTCCATGACCTTGTGCAGCATGTCAGTGATGTTGA...AAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGAATGACAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAAAATGCTCCAGAACTTaGCGTAACATGTTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSKCSRT*RNMFSR
Trigger: CCGAGAAAACATGTTACGGCAAGTTCTGGAGCATTT...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp AGTAGCTCCAATTCATATTCATCAAAAAGCTGTATGAGGGAGGGTGGAATGAACCATTCATCTAACGAGTaGCAAAGCAATTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSSNSYSSKSCMREGGMNHSSNE*QSNSRG
Trigger: GCCTCTGGAATTGCTTTGGCACTCGTTAGATGAATG...GTTCATTCCACCCTCCCTCATACAGCTTTTTGATGAATATGAATTGGAGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGGCTTCCTGTCTCCCTaGAAGAGCATCTGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVGFLSP*KSIWFR
Trigger: TCTAAACCAGATGCTCTTGCAGGGAGACAGGAAGCC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCAACATCCTGACAATCTaGACTGGCTTCCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASANILTI*TGFLSP
Trigger: GGGAGACAGGAAGCCAGTGCAGATTGTCAGGATGTT...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTTCATTCACTGGCCTGTaGACCATATCTGAATCTGGC +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPSFTGL*TISESG
Trigger: GCCAGATTCAGATATGGTGCACAGGCCAGTGAATGA...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518503.5
CDS-3UTR GCA 90 bp TTCAACTTACATGTCTCTCAAACATTACTGGCAAACACAATGACTGCTTATGAGCAACACCTTGACCCATaGCTTCTTCTCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: FNLHVSQTLLANTMTAYEQHLDP*LLLHGT
Trigger: GGTTCCATGGAGAAGAAGGCATGGGTCAAGGTGTTG...CTCATAAGCAGTCATTGTGTTTGCCAGTAATGTTTGAGAGACATGTAAGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCAACACCTTGACCCATaGCTTCTTCTCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAQHLDP*LLLHGT
Trigger: GGTTCCATGGAGAAGAAGGCATGGGTCAAGGTGTTG...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTAGGCACCTCTTCCATTaGTCCAAACACATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSRHLFH*SKHISL
Trigger: GAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCT...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCGCGATTGTAAAGTTTTaGAATCCACTTCCACCCATG +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFAIVKF*NPLPPM
Trigger: CATGGGTGGAAGTGGATTGCAAAACTTTACAATCGC...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp GGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAAAATGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GFKGTSSIAPNTSVSTEKCHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...TTTTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCATGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSCHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp TTCAACTTACATGTCTCTCAAACATTACTGGCAAACACAATGACTGCTTATGAGTGGAAGCATCAGCCCTaGCTATGGGTTGCATTTAGG +
Preference number: 4 (lower is better)
Translates to: FNLHVSQTLLANTMTAYEWKHQP*LWVAFR
Trigger: CCTAAATGCAACCCATAGGCAGGGCTGATGCTTCCA...CTCATAAGCAGTCATTGTGTTTGCCAGTAATGTTTGAGAGACATGTAAGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTGGAAGCATCAGCCCTaGCTATGGGTTGCATTTAGG +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRWKHQP*LWVAFR
Trigger: CCTAAATGCAACCCATAGGCAGGGCTGATGCTTCCA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGTGCTGTCTGCCCCATaGCATCCTCAACATCAACAT +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVVLSAP*HPQHQH
Trigger: ATGTTGATGTTGAGGATGCCATGGGGCAGACAGCAC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp AAAATCCATTGCAAATTTTTCGCATATTCTGGATCAATGGATGCCACATCTTGGCCCTGCAAGAGCATCTaGTTTAGATTCCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KIHCKFFAYSGSMDATSWPCKSI*FRFPCA
Trigger: GGCACAAGGGAATCTAAACCAGATGCTCTTGCAGGG...CCAAGATGTGGCATCCATTGATCCAGAATATGCGAAAAATTTGCAATGGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTATGCCTTCTTCTCCATaGAACCGTACAGCAATCCCT +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSMPSSP*NRTAIP
Trigger: AGGGATTGCTGTACGGTTCCATGGAGAAGAAGGCAT...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTTGACCAGCTGCCTGTaGTTCAACGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRLTSCL*FNANPK
Trigger: CTTGGGATTAGCGTTGAACCACAGGCAGCTGGTCAA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp TCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTGTGTCACAAGCTGTATGAGGGAGGGTaGAATGAACATATGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SKFSNKLDVLRFIILCHKLYEGG*NEHMKA
Trigger: GGCTTTCATATGTTCATTCCACCCTCCCTCATACAG...CTTGTGACACAAAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp GCTCTTGTCATTCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTCTGTATGAGGGAGGGTaGAATGAACATATGAAAGCC +
Preference number: 4 (lower is better)
Translates to: ALVIRSSVTSWTYSALLFLYEGG*NEHMKA
Trigger: GGCTTTCATATGTTCATTCCACCCTCCCTCATACAG...AAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGAATGACAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCATCAGCCCTGCCTATaGGTTGCATTTAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAHQPCL*VAFRLL
Trigger: AAGCAGCCTAAATGCAACCCATAGGCAGGGCTGATG...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
3UTR CAA 72 bp TCCAGAGGAGTTACTCCATTTTTATCTGGCAGATATTaGGCTCCTCGTAATAGTAGGATCTGTGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: SRGVTPFLSGRY*APRNSRICAVS
Trigger: AGATACAGCACAGATCCTACTATTACGAGGAGCCAAATATCTGCCAGATAAAAATGGAGTAACTCCTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
3UTR CAA 72 bp ATTTGGAGTATATGGCACAGCAGCGATTGTAAAGTTTaGCAATCCACTTCCACCCATGATATTAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: IWSIWHSSDCKV*QSTSTHDISKP
Trigger: GGGTTTGCTAATATCATGGGTGGAAGTGGATTGCAAAACTTTACAATCGCTGCTGTGCCATATACTCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCGAAACAGACCTGTGTTaGTCAGCCATAACCATTGGC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAETDLC*SAITIG
Trigger: GCCAATGGTTATGGCTGATCAACACAGGTCTGTTTC...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCCAATTTGCTGCAATGTaGAGCAAGCTTCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFQFAAM*SKLLFT
Trigger: TGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTG...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp TGCTGCAATGTGAAGCAAGCTTCTTTTCACACGTCCGAATGCATAATTGACATCCAATTTGCTGCAATGTaGAGCAAGCTTCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: CCNVKQASFHTSECIIDIQFAAM*SKLLFT
Trigger: TGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTG...GATGTCAATTATGCATTCGGACGTGTGAAAAGAAGCTTGCTTCACATTGCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR TCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTTTCTTGCTGCCAAATaGAGGGGTGTACAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRFLAAK*RGVQPE
Trigger: TTCAGGCTGTACACCCCTTCATTTGGCAGCAAGAAA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCTTTCTTGCTGCCAAATaGAGGGGTGTACAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAFLAAK*RGVQPE
Trigger: TTCAGGCTGTACACCCCTTCATTTGGCAGCAAGAAA...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTCAACATCAACATCACTaGCATGCTGCACAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPQHQHH*HAAQGH
Trigger: ATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTG...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp CTCACATCAATTTCTGGCATGCCAGAAAGCAGTAGCTCCAATTCATATTCATCACAATGGAGTTGCTCCTaGTACATTTGGCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: LTSISGMPESSSSNSYSSQWSCS*YIWPVN
Trigger: ATTAACAGGCCAAATGTATCAGGAGCAACTCCATTG...TGATGAATATGAATTGGAGCTACTGCTTTCTGGCATGCCAGAAATTGATGTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp AGCAGTAGCTCCAATTCATATTCATCAAAAAGCTGTATGAGGGAGGGTGGAATGAGGCTAAGCAGTTTATaGCCATTTGTTGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: SSSSNSYSSKSCMREGGMRLSSL*PFVVAT
Trigger: AGTTGCTACAACAAATGGTCATAAACTGCTTAGCCT...CATTCCACCCTCCCTCATACAGCTTTTTGATGAATATGAATTGGAGCTACTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCGATATGCATGAATCTTaGCATCAACTCAGGACATTC +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFDMHES*HQLRTF
Trigger: GAATGTCCTGAGTTGATGTCAAGATTCATGCATATC...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp AGATTTGGAGTATATGGCACAGCAGCGATTGTAAAGTTTTGCAATCCACTTCCAACTTCCCAGAACCACTaGATAACTGGATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RFGVYGTAAIVKFCNPLPTSQNH*ITGSSL
Trigger: AAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGT...TGGAAGTGGATTGCAAAACTTTACAATCGCTGCTGTGCCATATACTCCAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCACAAGAAGTCTGTCCTTaGGTATTTCTTTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSQEVCP*VFLYLG
Trigger: ACCCAAGTAAAGAAATACTCAAGGACAGACTTCTTG...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTCAAGAAGTCTGTCCTTaGGTATTTCTTTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIQEVCP*VFLYLG
Trigger: ACCCAAGTAAAGAAATACTCAAGGACAGACTTCTTG...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAACACACCAGCTGGATaGCCTCATATAATATATCAG +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFNTPAG*PHIIYQ
Trigger: CTGATATATTATATGAGGTCATCCAGCTGGTGTGTT...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp GATTTGCTCCTTTCTTTAACAGCAAAACCAAGCATTCCACCGATCCACAATTTGCGATCCACAATTTGCTaGAATGTGAAGCAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DLLLSLTAKPSIPPIHNLRSTIC*NVKQAS
Trigger: AGAAGCTTGCTTCACATTGCAGCAAATTGTGGATCG...CAAATTGTGGATCGGTGGAATGCTTGGTTTTGCTGTTAAAGAAAGGAGCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR GCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTCATTCATCTAACGAGTaGCAAAGCAATTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPHSSNE*QSNSRG
Trigger: GCCTCTGGAATTGCTTTGGCACTCGTTAGATGAATG...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCCGTACAGCAATCCCTTaGTTTAGCTTTGCACAATTT +
Preference number: 4 (lower is better)
Translates to: YFCHSELCISSQRSFPDFRTAIP*FSFAQF
Trigger: AAATTGTGCAAAGCTAAAGCAAGGGATTGCTGTACG...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATAGGCACCTCTTCCATTaGTCCAAACACATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYRHLFH*SKHISL
Trigger: GAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCT...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp TACAACTTCCCAGAACCACTGAATAACTGGATCTTCTCTTTCATAGCCACTTGTGCGATTGTAAAGTTTTaGAATCCACTTCCACCCATG +
Preference number: 4 (lower is better)
Translates to: YNFPEPLNNWIFSFIATCAIVKF*NPLPPM
Trigger: CATGGGTGGAAGTGGATTGCAAAACTTTACAATCGC...ACAAGTGGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp TCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTGTGTCACAAGGCGATTGTAAAGTTTTaGAATCCACTTCCACCCATG +
Preference number: 4 (lower is better)
Translates to: SKFSNKLDVLRFIILCHKAIVKF*NPLPPM
Trigger: CATGGGTGGAAGTGGATTGCAAAACTTTACAATCGC...CTTGTGACACAAAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAAAAGTTAGTTTGTGTAACCATAGCTaGCACAATGTAGTGCCACAA +
Preference number: 4 (lower is better)
Translates to: KGTSSIAPNTSVSTEKVSLCNHS*HNVVPQ
Trigger: TTGTGGCACTACATTGTGGCAGCTATGGTTACACAA...ACTAACTTTTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAGCATTTCTTCGTGTATaGATGTTCCTACTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSAFLRV*MFLLPV
Trigger: AACAGGAAGTAGGAACATGCATACACGAAGAAATGC...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTTATCTGGCAGATATTTaGCTCCTCGTAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIYLADI*LLVIVG
Trigger: TCCTACTATTACGAGGAGCCAAATATCTGCCAGATA...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCATTACTGGGGGAGGATaGACCAATTCGAAAGACGTG +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVITGGG*TNSKDV
Trigger: CACGTCTTTCGAATTGGTCCATCCTCCCCCAGTAAT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATATTACTGGGGGAGGATaGACCAATTCGAAAGACGTG +
Preference number: 4 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYITGGG*TNSKDV
Trigger: CACGTCTTTCGAATTGGTCCATCCTCCCCCAGTAAT...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp AAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAAAAGTTAGTAGAGGCTTGAACACCTaGCTTCTTGGAGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: KGTSSIAPNTSVSTEKVSRGLNT*LLGVLF
Trigger: GAATAAAACTCCAAGAAGCCAGGTGTTCAAGCCTCT...ACTAACTTTTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCTCCTGGAGGTTCAAATaGAGGAATGGAAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASASWRFK*RNGSSI
Trigger: GATGCTGCTTCCATTCCTCCATTTGAACCTCCAGGA...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTATAGCTCCCAGGTCCTaGAGGTTCAAATGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPIAPRS*RFKWRN
Trigger: ATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTAT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATCCCTGCAAGAGCATCTaGTTTAGATTCCCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYPCKSI*FRFPCA
Trigger: GGCACAAGGGAATCTAAACCAGATGCTCTTGCAGGG...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCATGCCTTCTTCTCCATaGAACCGTACAGCAATCCCT +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVMPSSP*NRTAIP
Trigger: AGGGATTGCTGTACGGTTCCATGGAGAAGAAGGCAT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTCAATTTGCTGCAATGTaGAGCAAGCTTCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPQFAAM*SKLLFT
Trigger: TGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTG...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp AAAAATAGAATCTCTGTGAACCAGCAGGATATCATTTTCATTCACTGGCCTGTGAAGGGGTGTACAGCCTaGAATATCTTGATAGTTAGG +
Preference number: 4 (lower is better)
Translates to: KNRISVNQQDIIFIHWPVKGCTA*NILIVR
Trigger: CCTAACTATCAAGATATTTCAGGCTGTACACCCCTT...CACAGGCCAGTGAATGAAAATGATATCCTGCTGGTTCACAGAGATTCTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTATGGAAGCAGCATCTTaGTCTTGGCCTTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSMEAAS*SWPFCF
Trigger: GAAACAAAAAGGCCAAGATCAAGATGCTGCTTCCAT...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATTTCAATGAAACGAGGTaGAGTCATTCCCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYFNETR*SHSRRH
Trigger: ATGCCTCCGGGAATGACTTCACCTCGTTTCATTGAA...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAATGCATAATCAGGATTaGCTATCTCATTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: TSAILNCASVVRGVFQTSMHNQD*LSHWTE
Trigger: TTCTGTCCAATGAGATAGTCAATCCTGATTATGCAT...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTAGTTGTTCCATCAGCTaGCTGGGTAAACAATGCATA +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPSCSIS*LGKQCI
Trigger: TATGCATTGTTTACCCAGTCAGCTGATGGAACAACT...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGAGTTGTTCCATCAGCTaGCTGGGTAAACAATGCATA +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALSCSIS*LGKQCI
Trigger: TATGCATTGTTTACCCAGTCAGCTGATGGAACAACT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTGAGTTGCTATTAGGCTaGAAAGTTGTTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPELLLG*KVVPSA
Trigger: AGCTGATGGAACAACTTTTCAGCCTAATAGCAACTC...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp TTGAGTAATGTCTTCTACAACTTCCCAGAACCACTGAATAACTGGATCTTCTCTACTTCCCAGAACCACTaGATAACTGGATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSNVFYNFPEPLNNWIFSTSQNH*ITGSSL
Trigger: AAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGT...AGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGTTGTAGAAGACATTACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTACTTCCCAGAACCACTaGATAACTGGATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPTSQNH*ITGSSL
Trigger: AAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGT...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
CDS-3UTR TCA 90 bp GATTGTAAAGTTTTGCAATCCACTTCCACCCATGATATTAGCAAACCCACCATGAGAACTCTCTCCTCTTaGGTAATGTCTTCTACAACT +
Preference number: 4 (lower is better)
Translates to: DCKVLQSTSTHDISKPTMRTLSS*VMSSTT
Trigger: AGTTGTAGAAGACATTACTCAAGAGGAGAGAGTTCT...CATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTGCAAAACTTTACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp GCTCTTGTCATTCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTCAAGAAGTCTGTCCTTaGGTATTTCTTTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: ALVIRSSVTSWTYSALLFQEVCP*VFLYLG
Trigger: ACCCAAGTAAAGAAATACTCAAGGACAGACTTCTTG...AAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGAATGACAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTCAAGAAGTCTGTCCTTaGGTATTTCTTTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPQEVCP*VFLYLG
Trigger: ACCCAAGTAAAGAAATACTCAAGGACAGACTTCTTG...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTAACACACCAGCTGGATaGCCTCATATAATATATCAG +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPNTPAG*PHIIYQ
Trigger: CTGATATATTATATGAGGTCATCCAGCTGGTGTGTT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTCGATCCACAATTTGCTaGAATGTGAAGCAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPRSTIC*NVKQAS
Trigger: AGAAGCTTGCTTCACATTGCAGCAAATTGTGGATCG...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTAGCCAGCCAATGTATTaGTGTAAGGCCTTCATTATT +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPSQPMY*CKAFII
Trigger: AATAATGAAGGCCTTACAGCAATACATTGGCTGGCT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGACATCACTGACATGCTaGACAAGGTCATGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRTSLTC*TRSWSS
Trigger: ACTACTCCATGACCTTGTGCAGCATGTCAGTGATGT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCACATCACTGACATGCTaGACAAGGTCATGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVTSLTC*TRSWSS
Trigger: ACTACTCCATGACCTTGTGCAGCATGTCAGTGATGT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTAAATGCTCCAGAACTTaGCGTAACATGTTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPKCSRT*RNMFSR
Trigger: CCGAGAAAACATGTTACGGCAAGTTCTGGAGCATTT...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCATTCATCTAACGAGTaGCAAAGCAATTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAHSSNE*QSNSRG
Trigger: GCCTCTGGAATTGCTTTGGCACTCGTTAGATGAATG...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTGCGATTGTAAAGTTTTaGAATCCACTTCCACCCATG +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSAIVKF*NPLPPM
Trigger: CATGGGTGGAAGTGGATTGCAAAACTTTACAATCGC...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTGTGTAACCATAGCTaGCACAATGTAGTGCCACAA +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSLCNHS*HNVVPQ
Trigger: TTGTGGCACTACATTGTGGCAGCTATGGTTACACAA...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGTGCCATTCTGAATTGTaGATCAGTAGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALCHSEL*ISSQRS
Trigger: ACTCCTCTGACTACTGATGCACAATTCAGAATGGCA...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGGACGTACTCCGCCTGTaGTTTTATGATATGCATGAA +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALDVLRL*FYDMHE
Trigger: TTCATGCATATCATAAAAGCACAGGCGGAGTACGTC...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369125.6
CDS-3UTR CCA 90 bp AGTTTTCCAGACTTCATTATGCCATTGTGTAACCATAGCTGCCACAATGTAGTGTATCTGGCAGATATTTaGCTCCTCGTAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SFPDFIMPLCNHSCHNVVYLADI*LLVIVG
Trigger: TCCTACTATTACGAGGAGCCAAATATCTGCCAGATA...CACTACATTGTGGCAGCTATGGTTACACAATGGCATAATGAAGTCTGGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTATCAATTCCATTACTaGGGGAGGATGGACCAATTC +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSYQFHY*GRMDQF
Trigger: GAATTGGTCCATCCTCCCCCAGTAATGGAATTGATA...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGAGAGGCTTGAACACCTaGCTTCTTGGAGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALRGLNT*LLGVLF
Trigger: GAATAAAACTCCAAGAAGCCAGGTGTTCAAGCCTCT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp AGCAGTAGCTCCAATTCATATTCATCAAAAAGCTGTATGAGGGAGGGTGGAATGCATATTCTGGATCAATaGATGCCACATCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: SSSSNSYSSKSCMREGGMHILDQ*MPHLGN
Trigger: ATTACCAAGATGTGGCATCCATTGATCCAGAATATG...CATTCCACCCTCCCTCATACAGCTTTTTGATGAATATGAATTGGAGCTACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTCATATTCTGGATCAATaGATGCCACATCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIHILDQ*MPHLGN
Trigger: ATTACCAAGATGTGGCATCCATTGATCCAGAATATG...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGTATGAGGGAGGGTaGAATGAACATATGAAAGCC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASALYEGG*NEHMKA
Trigger: GGCTTTCATATGTTCATTCCACCCTCCCTCATACAG...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AGTTTTCCAGACTTCATTATGCCATTGTGTAACCATAGCTGCCACAATGTAGTGGAACCACTGAATAACTaGATCTTCTCTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: SFPDFIMPLCNHSCHNVVEPLNN*IFSFIA
Trigger: GGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTC...CACTACATTGTGGCAGCTATGGTTACACAATGGCATAATGAAGTCTGGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp CTTGGGTATTCAGGTAACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAGAACCACTGAATAACTaGATCTTCTCTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: LGYSGNLSMLMHVLEVGKEPLNN*IFSFIA
Trigger: GGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTC...TTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTTACCTGAATACCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp TGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATGGCACAGCAGCGATTGAAGATTTGGAGTATATaGCACAGCAGCGATTGTAAA +
Preference number: 4 (lower is better)
Translates to: CMCLKLVKDLEYMAQQRLKIWSI*HSSDCK
Trigger: TTTACAATCGCTGCTGTGCCATATACTCCAAATCTT...CAATCGCTGCTGTGCCATATACTCCAAATCTTTTACCAACTTCAAGCACATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTAAGATTTGGAGTATATaGCACAGCAGCGATTGTAAA +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIKIWSI*HSSDCK
Trigger: TTTACAATCGCTGCTGTGCCATATACTCCAAATCTT...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTCAATTTGCTGCAATGTaGAGCAAGCTTCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSQFAAM*SKLLFT
Trigger: TGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTG...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAAGGGGTGTACAGCCTaGAATATCTTGATAGTTAGG +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVKGCTA*NILIVR
Trigger: CCTAACTATCAAGATATTTCAGGCTGTACACCCCTT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCAATGGAGTTGCTCCTaGTACATTTGGCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAQWSCS*YIWPVN
Trigger: ATTAACAGGCCAAATGTATCAGGAGCAACTCCATTG...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCCAATGGAGTTGCTCCTaGTACATTTGGCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVQWSCS*YIWPVN
Trigger: ATTAACAGGCCAAATGTATCAGGAGCAACTCCATTG...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCAATTCGAAAGACGTaGCAAAACATTCTCACAATC +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALPIRKT*QNILTI
Trigger: GATTGTGAGAATGTTTTGTCACGTCTTTCGAATTGG...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTATGGAAGCAGCATCTTaGTCTTGGCCTTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPMEAAS*SWPFCF
Trigger: GAAACAAAAAGGCCAAGATCAAGATGCTGCTTCCAT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR TCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGATGGAAGCAGCATCTTaGTCTTGGCCTTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRMEAAS*SWPFCF
Trigger: GAAACAAAAAGGCCAAGATCAAGATGCTGCTTCCAT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCAGTTGTTCCATCAGCTaGCTGGGTAAACAATGCATA +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASASCSIS*LGKQCI
Trigger: TATGCATTGTTTACCCAGTCAGCTGATGGAACAACT...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTACTTCCCAGAACCACTaGATAACTGGATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPTSQNH*ITGSSL
Trigger: AAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR TCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGACTTCCCAGAACCACTaGATAACTGGATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRTSQNH*ITGSSL
Trigger: AAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
CDS-3UTR TCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGAGAACTCTCTCCTCTTaGGTAATGTCTTCTACAACT +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALRTLSS*VMSSTT
Trigger: AGTTGTAGAAGACATTACTCAAGAGGAGAGAGTTCT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
CDS-3UTR TCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTAGAACTCTCTCCTCTTaGGTAATGTCTTCTACAACT +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPRTLSS*VMSSTT
Trigger: AGTTGTAGAAGACATTACTCAAGAGGAGAGAGTTCT...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
CDS-3UTR TCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTAACACACCAGCTGGATaGCCTCATATAATATATCAG +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPNTPAG*PHIIYQ
Trigger: CTGATATATTATATGAGGTCATCCAGCTGGTGTGTT...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGCGATCCACAATTTGCTaGAATGTGAAGCAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRRSTIC*NVKQAS
Trigger: AGAAGCTTGCTTCACATTGCAGCAAATTGTGGATCG...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGAGCCAGCCAATGTATTaGTGTAAGGCCTTCATTATT +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALSQPMY*CKAFII
Trigger: AATAATGAAGGCCTTACAGCAATACATTGGCTGGCT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR GCA 90 bp TTGAGTAATGTCTTCTACAACTTCCCAGAACCACTGAATAACTGGATCTTCTCTCGTACAGCAATCCCTTaGTTTAGCTTTGCACAATTT +
Preference number: 4 (lower is better)
Translates to: LSNVFYNFPEPLNNWIFSRTAIP*FSFAQF
Trigger: AAATTGTGCAAAGCTAAAGCAAGGGATTGCTGTACG...AGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGTTGTAGAAGACATTACTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCGTACAGCAATCCCTTaGTTTAGCTTTGCACAATTT +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALRTAIP*FSFAQF
Trigger: AAATTGTGCAAAGCTAAAGCAAGGGATTGCTGTACG...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATGCGATTGTAAAGTTTTaGAATCCACTTCCACCCATG +
Preference number: 4 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYAIVKF*NPLPPM
Trigger: CATGGGTGGAAGTGGATTGCAAAACTTTACAATCGC...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGCGATTGTAAAGTTTTaGAATCCACTTCCACCCATG +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVAIVKF*NPLPPM
Trigger: CATGGGTGGAAGTGGATTGCAAAACTTTACAATCGC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTTTGTGTAACCATAGCTaGCACAATGTAGTGCCACAA +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPLCNHS*HNVVPQ
Trigger: TTGTGGCACTACATTGTGGCAGCTATGGTTACACAA...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTTGTGTAACCATAGCTaGCACAATGTAGTGCCACAA +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRLCNHS*HNVVPQ
Trigger: TTGTGGCACTACATTGTGGCAGCTATGGTTACACAA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp GCTCTTGTCATTCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTTCCAGACTTCATTATaGCATTGTGTAACCATAGCT +
Preference number: 4 (lower is better)
Translates to: ALVIRSSVTSWTYSALLFFQTSL*HCVTIA
Trigger: AGCTATGGTTACACAATGGCATAATGAAGTCTGGAA...AAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGAATGACAAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR GCA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTTTCCAGACTTCATTATaGCATTGTGTAACCATAGCT +
Preference number: 4 (lower is better)
Translates to: RETENLMILYKLEASALPFQTSL*HCVTIA
Trigger: AGCTATGGTTACACAATGGCATAATGAAGTCTGGAA...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTACTACTGGCCACCTGTaGTTTTATGATATGCATGAA +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSTTGHL*FYDMHE
Trigger: TTCATGCATATCATAAAAGCACAGGTGGCCAGTAGT...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATTATCAATTCCATTACTaGGGGAGGATGGACCAATTC +
Preference number: 4 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYYQFHY*GRMDQF
Trigger: GAATTGGTCCATCCTCCCCCAGTAATGGAATTGATA...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp AAAATCCATTGCAAATTTTTCGCATATTCTGGATCAATGGATGCCACATCTTGGTATCAATTCCATTACTaGGGGAGGATGGACCAATTC +
Preference number: 4 (lower is better)
Translates to: KIHCKFFAYSGSMDATSWYQFHY*GRMDQF
Trigger: GAATTGGTCCATCCTCCCCCAGTAATGGAATTGATA...CCAAGATGTGGCATCCATTGATCCAGAATATGCGAAAAATTTGCAATGGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTAGAGGCTTGAACACCTaGCTTCTTGGAGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPRGLNT*LLGVLF
Trigger: GAATAAAACTCCAAGAAGCCAGGTGTTCAAGCCTCT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp TCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTGTGTCACAAGCATATTCTGGATCAATaGATGCCACATCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: SKFSNKLDVLRFIILCHKHILDQ*MPHLGN
Trigger: ATTACCAAGATGTGGCATCCATTGATCCAGAATATG...CTTGTGACACAAAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTGAACCACTGAATAACTaGATCTTCTCTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSEPLNN*IFSFIA
Trigger: GGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTC...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
CDS-3UTR CCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTGAACCACTGAATAACTaGATCTTCTCTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPEPLNN*IFSFIA
Trigger: GGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTC...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
CDS-3UTR CCA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTAAAGAACACACCAGCTaGATGACCTCATATAATATA +
Preference number: 4 (lower is better)
Translates to: NLMILYKLEASALPMGCIKEHTS*MTSYNI
Trigger: TATATTATATGAGGTCATCCAGCTGGTGTGTTCTTT...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTAGGCTAAGCAGTTTATaGCCATTTGTTGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPRLSSL*PFVVAT
Trigger: AGTTGCTACAACAAATGGTCATAAACTGCTTAGCCT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR TCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCAGGCTAAGCAGTTTATaGCCATTTGTTGTAGCAACT +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASARLSSL*PFVVAT
Trigger: AGTTGCTACAACAAATGGTCATAAACTGCTTAGCCT...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGCCAATTCGAAAGACGTaGCAAAACATTCTCACAATC +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRPIRKT*QNILTI
Trigger: GATTGTGAGAATGTTTTGTCACGTCTTTCGAATTGG...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR TCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCGATATGCATGAATCTTaGCATCAACTCAGGACATTC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASADMHES*HQLRTF
Trigger: GAATGTCCTGAGTTGATGTCAAGATTCATGCATATC...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTATGCATAATCAGGATTaGCTATCTCATTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSMHNQD*LSHWTE
Trigger: TTCTGTCCAATGAGATAGTCAATCCTGATTATGCAT...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATGAGTTGCTATTAGGCTaGAAAGTTGTTCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYELLLG*KVVPSA
Trigger: AGCTGATGGAACAACTTTTCAGCCTAATAGCAACTC...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR TCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTAGAACTCTCTCCTCTTaGGTAATGTCTTCTACAACT +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPRTLSS*VMSSTT
Trigger: AGTTGTAGAAGACATTACTCAAGAGGAGAGAGTTCT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR TCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAACTCTCTCCTCTTaGGTAATGTCTTCTACAACT +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRRTLSS*VMSSTT
Trigger: AGTTGTAGAAGACATTACTCAAGAGGAGAGAGTTCT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
CDS-3UTR TCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCCAAGAAGTCTGTCCTTaGGTATTTCTTTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVQEVCP*VFLYLG
Trigger: ACCCAAGTAAAGAAATACTCAAGGACAGACTTCTTG...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGCAAGAAGTCTGTCCTTaGGTATTTCTTTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRQEVCP*VFLYLG
Trigger: ACCCAAGTAAAGAAATACTCAAGGACAGACTTCTTG...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR TCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTTACTGGCAAACACAATaGCTGCTTATGAGAAAATCT +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPYWQTQ*LLMRKS
Trigger: AGATTTTCTCATAAGCAGTCATTGTGTTTGCCAGTA...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp AAAATCCATTGCAAATTTTTCGCATATTCTGGATCAATGGATGCCACATCTTGGAGCCAGCCAATGTATTaGTGTAAGGCCTTCATTATT +
Preference number: 4 (lower is better)
Translates to: KIHCKFFAYSGSMDATSWSQPMY*CKAFII
Trigger: AATAATGAAGGCCTTACAGCAATACATTGGCTGGCT...CCAAGATGTGGCATCCATTGATCCAGAATATGCGAAAAATTTGCAATGGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCGTACAGCAATCCCTTaGTTTAGCTTTGCACAATTT +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASARTAIP*FSFAQF
Trigger: AAATTGTGCAAAGCTAAAGCAAGGGATTGCTGTACG...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGCGTACAGCAATCCCTTaGTTTAGCTTTGCACAATTT +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRRTAIP*FSFAQF
Trigger: AAATTGTGCAAAGCTAAAGCAAGGGATTGCTGTACG...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGTTCTGGATCAATGGATaGCACATCTTGGTAATTTAC +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALFWING*HILVIY
Trigger: GTAAATTACCAAGATGTGGCATCCATTGATCCAGAA...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTTTCTGGATCAATGGATaGCACATCTTGGTAATTTAC +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPFWING*HILVIY
Trigger: GTAAATTACCAAGATGTGGCATCCATTGATCCAGAA...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp TACAACTTCCCAGAACCACTGAATAACTGGATCTTCTCTTTCATAGCCACTTGTTCCTGTTCAAACATATaGTGTAACTATTCAAGTACG +
Preference number: 4 (lower is better)
Translates to: YNFPEPLNNWIFSFIATCSCSNI*CNYSST
Trigger: CGTACTTGAATAGTTACAGCATATGTTTGAACAGGA...ACAAGTGGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR GCA 90 bp TTCAACTTACATGTCTCTCAAACATTACTGGCAAACACAATGACTGCTTATGAGGCATTTCTTCGTGTATaGATGTTCCTACTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FNLHVSQTLLANTMTAYEAFLRV*MFLLPV
Trigger: AACAGGAAGTAGGAACATGCATACACGAAGAAATGC...CTCATAAGCAGTCATTGTGTTTGCCAGTAATGTTTGAGAGACATGTAAGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCTATCTGGCAGATATTTaGCTCCTCGTAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAYLADI*LLVIVG
Trigger: TCCTACTATTACGAGGAGCCAAATATCTGCCAGATA...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CCA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTCATATTCTGGATCAATaGATGCCACATCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPHILDQ*MPHLGN
Trigger: ATTACCAAGATGTGGCATCCATTGATCCAGAATATG...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTCATATTCTGGATCAATaGATGCCACATCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSHILDQ*MPHLGN
Trigger: ATTACCAAGATGTGGCATCCATTGATCCAGAATATG...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTAGTTCAGTAACAAGCTaGACGTACTCCGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPSSVTS*TYSALL
Trigger: TAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCGAACCACTGAATAACTaGATCTTCTCTTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAEPLNN*IFSFIA
Trigger: GGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTC...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
CDS-3UTR CCA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGAAGATTTGGAGTATATaGCACAGCAGCGATTGTAAA +
Preference number: 4 (lower is better)
Translates to: KRETENLMILYKLEASALKIWSI*HSSDCK
Trigger: TTTACAATCGCTGCTGTGCCATATACTCCAAATCTT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp TATGGCACAGCAGCGATTGTAAAGTTTTGCAATCCACTTCCACCCATGATATTAAAAGAACACACCAGCTaGATGACCTCATATAATATA +
Preference number: 4 (lower is better)
Translates to: YGTAAIVKFCNPLPPMILKEHTS*MTSYNI
Trigger: TATATTATATGAGGTCATCCAGCTGGTGTGTTCTTT...TAATATCATGGGTGGAAGTGGATTGCAAAACTTTACAATCGCTGCTGTGCCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR TCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCATGCATAATCAGGATTaGCTATCTCATTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVMHNQD*LSHWTE
Trigger: TTCTGTCCAATGAGATAGTCAATCCTGATTATGCAT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTTTCCAGACTTCATTATaGCATTGTGTAACCATAGCT +
Preference number: 4 (lower is better)
Translates to: ILNITNPSVSISSCMHVPFQTSL*HCVTIA
Trigger: AGCTATGGTTACACAATGGCATAATGAAGTCTGGAA...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR GCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTTCCAGACTTCATTATaGCATTGTGTAACCATAGCT +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRFQTSL*HCVTIA
Trigger: AGCTATGGTTACACAATGGCATAATGAAGTCTGGAA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR GCA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTCCTGTTCAAACATATaGTGTAACTATTCAAGTACG +
Preference number: 4 (lower is better)
Translates to: IFPNYFCHSELCISSQRSSCSNI*CNYSST
Trigger: CGTACTTGAATAGTTACAGCATATGTTTGAACAGGA...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CCA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAAGATTTGGAGTATATaGCACAGCAGCGATTGTAAA +
Preference number: 4 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRKIWSI*HSSDCK
Trigger: TTTACAATCGCTGCTGTGCCATATACTCCAAATCTT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAAGATTTGGAGTATATaGCACAGCAGCGATTGTAAA +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVKIWSI*HSSDCK
Trigger: TTTACAATCGCTGCTGTGCCATATACTCCAAATCTT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCAAAGAACACACCAGCTaGATGACCTCATATAATATA +
Preference number: 4 (lower is better)
Translates to: EKRETENLMILYKLEASAKEHTS*MTSYNI
Trigger: TATATTATATGAGGTCATCCAGCTGGTGTGTTCTTT...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CCA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAAAGAACACACCAGCTaGATGACCTCATATAATATA +
Preference number: 4 (lower is better)
Translates to: LLTFSQITSAILNCASVVKEHTS*MTSYNI
Trigger: TATATTATATGAGGTCATCCAGCTGGTGTGTTCTTT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
3UTR CAA 72 bp ATTTTTCGCATATTCTGGATCAATGGATGCCACATCTaGGTAATTTACAGGAATACCAAGAATGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: IFRIFWINGCHI*VIYRNTKNVLV
Trigger: TACAAGCACATTCTTGGTATTCCTGTAAATTACCAAGATGTGGCATCCATTGATCCAGAATATGCGAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS GCA 90 bp GACCACCTACAGTACACCCGCCGCCGCCTCTGCTCGCGCCTTTCCTaGAGCCCCCGCCGCCGCGTCCCTCCCGGGCTCGCGTGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: DHLQYTRRRLCSRLS*SPRRRVPPGLAWPS
Trigger: AGAAGGCCACGCGAGCCCGGGAGGGACGCGGCGGCGGGGGCTGCAGGAAAGGCGCGAGCAGAGGCGGCGGCGGGTGTACTGTAGGTGGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000369125.6
CDS TCA 90 bp GCAACTCCACGGTGCGCGCGCGGCGCAGCGAGCGCGTCAGGCGGTTaGGTTGCTCCATCGCTCTCTCCATCCTCGGCGCGCCCTCCGCGA +
Preference number: 5 (lower is better)
Translates to: ATPRCARGAASASGG*VAPSLSPSSARPPR
Trigger: TCGCGGAGGGCGCGCCGAGGATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTCGCTGCGCCGCGCGCGCACCGTGGAGTTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS GCA 90 bp TCCACGGTGCGCGCGCGGCGCAGCGAGCGCGTCAGGCGGTTGAGTTaGTCCATCGCTCTCTCCATCCTCGGCGCGCCCTCCGCGATCCTC +
Preference number: 5 (lower is better)
Translates to: STVRARRSERVRRLS*SIALSILGAPSAIL
Trigger: GAGGATCGCGGAGGGCGCGCCGAGGATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTCGCTGCGCCGCGCGCGCACCGTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS-3UTR CAA 90 bp CCACTTCCACCCATGATATTAGCAAACCCACCATGTGGGACCCTGGAACTGCCCCTCACGCACAACACCTaGACCCATGCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLPPMILANPPCGTLELPLTHNT*THAFFS
Trigger: GGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGAG...GGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS TCA 90 bp GCAGATCACGACGTCAGGAGATTGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTACGTCTTGTGACCGTTCTGGCAGGCAACAT +
Preference number: 5 (lower is better)
Translates to: ADHDVRRLRPSWLTR*NPVSTSCDRSGRQH
Trigger: ATGTTGCCTGCCAGAACGGTCACAAGACGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACGTCGTGATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS GCA 90 bp GCTGTCTGCCCCATGGCATCCTCAACATCAACATCACTGACATGCTaGACAAGGTCATGGAGTAGTTCTGTCCGCCCATTCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: AVCPMASSTSTSLTC*TRSWSSSVRPFTAS
Trigger: GCTGGCTGTGAATGGGCGGACAGAACTACTCCATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTGAGGATGCCATGGGGCAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000524020.1
CDS GCA 90 bp GCACTGCACTGTCGTCTTGTGACCGTTCTGGCAGGCAACATGCAGTaGTGTCTGCCCCATGGCATCCTCAACATCAACATCACTGACATG +
Preference number: 5 (lower is better)
Translates to: ALHCRLVTVLAGNMQ*CLPHGILNINITDM
Trigger: CATGTCAGTGATGTTGATGTTGAGGATGCCATGGGGCAGACAGCACTGCATGTTGCCTGCCAGAACGGTCACAAGACGACAGTGCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000369125.6
CDS GCA 90 bp ACCCCGTCTCTACGTCTTGTGACCGTTCTGGCAGGCAACATGCAGTaGTGTCTGCCCCATGGCATCCTCAACATCAACATCACTGACATG +
Preference number: 5 (lower is better)
Translates to: TPSLRLVTVLAGNMQ*CLPHGILNINITDM
Trigger: CATGTCAGTGATGTTGATGTTGAGGATGCCATGGGGCAGACAGCACTGCATGTTGCCTGCCAGAACGGTCACAAGACGTAGAGACGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS TCA 90 bp TCACAGCGATCTTTAAAAGGCTGTAGTCCCAGCTACTTGAAAGACTaGGCTGGGAGGATCGCTTCAGCCCAGGAGGCAGACGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SQRSLKGCSPSYLKD*AGRIASAQEADVAV
Trigger: CACTGCAACGTCTGCCTCCTGGGCTGAAGCGATCCTCCCAGCTCAGTCTTTCAAGTAGCTGGGACTACAGCCTTTTAAAGATCGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517995.5
CDS-3UTR CAA 90 bp GCCAGTGGACAGATTTTCATAGCTCCCAGGTCCTGGAGGTTCAAATGGAGGAATCCACCGATCCACAATTaGCTGCAATGTGAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: ASGQIFIAPRSWRFKWRNPPIHN*LQCEAS
Trigger: GCTTGCTTCACATTGCAGCAAATTGTGGATCGGTGG...ATTCCTCCATTTGAACCTCCAGGACCTGGGAGCTATGAAAATCTGTCCACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CAA 90 bp AATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGCAATTCCAGAGGCTaGAACACCTGGCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: NTPTPRFQRHLFHCSKHISNSRG*NTWLLG
Trigger: TCCAAGAAGCCAGGTGTTCAAGCCTCTGGAATTGCT...GATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS CCA 90 bp ATGGCATCCTCAACATCAACATCACTGACATGCTGCACAAGGTCATaGAGTAGTTCTGTCCGCCCATTCACAGCCAGCCAATGTATTGCT +
Preference number: 5 (lower is better)
Translates to: MASSTSTSLTCCTRS*SSSVRPFTASQCIA
Trigger: AGCAATACATTGGCTGGCTGTGAATGGGCGGACAGAACTACTCCATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTGAGGATGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000524020.1
CDS-3UTR CAA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCACGTCAGGCGGTTGAGTaGCTCCATCGCTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: TSAILNCASVVRGVFQTSRQAVE*LHRSLH
Trigger: ATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACG...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGGAGCGCGTCAGGCGGTaGAGTTGCTCCATCGCTCTC +
Preference number: 5 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRERVRR*SCSIAL
Trigger: GAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTC...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGAGCGCGTCAGGCGGTaGAGTTGCTCCATCGCTCTC +
Preference number: 5 (lower is better)
Translates to: LLTFSQITSAILNCASVVERVRR*SCSIAL
Trigger: GAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCACTCACGCACAACACCTaGACCCATGCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TSAILNCASVVRGVFQTSLTHNT*THAFFS
Trigger: GGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGAG...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTCTCACGCACAACACCTaGACCCATGCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NLMILYKLEASALPMGCILTHNT*THAFFS
Trigger: GGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGAG...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp CCATGTGGGACCCTGGAACTGCCCGTAACAAACTGTAAGAGAAGAACTCTCTCCGGTAACTTGAGCATGTaGATGCATGTGCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: PCGTLELPVTNCKRRTLSGNLSM*MHVLEV
Trigger: AACTTCAAGCACATGCATCAACATGCTCAAGTTACC...GGAGAGAGTTCTTCTCTTACAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp TTTGCTCCTTTCTTTAACAGCAAAACCAAGCATTCCACCGATCCACAATTTGCTCAGGGTGCGGATCACTaGAGCCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: FAPFFNSKTKHSTDPQFAQGADH*SPGVQD
Trigger: GTCTTGAACTCCTGGGCTCAAGTGATCCGCACCCTG...AGCAAATTGTGGATCGGTGGAATGCTTGGTTTTGCTGTTAAAGAAAGGAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS CCA 90 bp GTTTTGCAATCCACTTCCACCCATGATATTAGCAAACCCACCATGTaGGACCCTGGAACTGCCCGTAACAAACTGAATAACTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: VLQSTSTHDISKPTM*DPGTARNKLNNWIF
Trigger: GAAGATCCAGTTATTCAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGATTGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518503.5
CDS-3UTR CAA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTCGTCAGGCGGTTGAGTaGCTCCATCGCTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPRQAVE*LHRSLH
Trigger: ATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACG...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp TCTGCCCATTTCTTGCTGCCAAATGAAGGGGTGTACAGCCTGAAATATCTTGATCCACCGATCCACAATTaGCTGCAATGTGAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: SAHFLLPNEGVYSLKYLDPPIHN*LQCEAS
Trigger: GCTTGCTTCACATTGCAGCAAATTGTGGATCGGTGG...ATCAAGATATTTCAGGCTGTACACCCCTTCATTTGGCAGCAAGAAATGGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR CAA 90 bp GTCACAAGAATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAATGGAAGCAGCATCTaGATCTTGGCCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: VTRILPPPGFKGTSSIAPNGSSI*ILAFLF
Trigger: AAACAAAAAGGCCAAGATCAAGATGCTGCTTCCATT...TGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATTCTTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CAA 90 bp GCTCTTGTCATTCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTCTCACGCACAACACCTaGACCCATGCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ALVIRSSVTSWTYSALLFLTHNT*THAFFS
Trigger: GGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGAG...AAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGAATGACAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp CCATGTGGGACCCTGGAACTGCCCGTAACAAACTGTAAGAGAAGAACTCTCTCCCTCCGCTTTATTATTTaGTGTCACAAGAATACTCCC +
Preference number: 5 (lower is better)
Translates to: PCGTLELPVTNCKRRTLSLRFII*CHKNTP
Trigger: GGGAGTATTCTTGTGACACAAAATAATAAAGCGGAG...GGAGAGAGTTCTTCTCTTACAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp AATACTCCCACCCCCAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGCGATTGTAAAGTTTaGCAATCCACTTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: NTPTPRFQRHLFHCSKHISDCKV*QSTSTH
Trigger: ATGGGTGGAAGTGGATTGCAAAACTTTACAATCGCT...GATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGGAGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp CCATGTGGGACCCTGGAACTGCCCGTAACAAACTGTAAGAGAAGAACTCTCTCCAAGTTGGTAAAAGATTaGGAGTATATGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: PCGTLELPVTNCKRRTLSKLVKD*EYMAQQ
Trigger: CTGCTGTGCCATATACTCCAAATCTTTTACCAACTT...GGAGAGAGTTCTTCTCTTACAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTCGTCAGGCGGTTGAGTaGCTCCATCGCTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: ILNITNPSVSISSCMHVPRQAVE*LHRSLH
Trigger: ATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACG...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCCCACCGATCCACAATTaGCTGCAATGTGAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFPPIHN*LQCEAS
Trigger: GCTTGCTTCACATTGCAGCAAATTGTGGATCGGTGG...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp GCTCTTGTCATTCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTCACGACGTCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: ALVIRSSVTSWTYSALLFHDVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACGTCGTG...AAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGAATGACAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CAA 90 bp TCTGCCCATTTCTTGCTGCCAAATGAAGGGGTGTACAGCCTGAAATATCTTGATAGAAACAGACCTGTGTaGATCAGCCATAACCATTGG +
Preference number: 5 (lower is better)
Translates to: SAHFLLPNEGVYSLKYLDRNRPV*ISHNHW
Trigger: CCAATGGTTATGGCTGATCAACACAGGTCTGTTTCT...ATCAAGATATTTCAGGCTGTACACCCCTTCATTTGGCAGCAAGAAATGGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521962.1
CDS-3UTR CAA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAGTACTGGCTTTCACTTaGCTGAGACAAATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TSAILNCASVVRGVFQTSVLAFT*LRQMLQ
Trigger: CTGGAGCATTTGTCTCAGCAAAGTGAAAGCCAGTAC...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGCTCACGCACAACACCTaGACCCATGCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRLTHNT*THAFFS
Trigger: GGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGTGAG...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAGAAACAGACCTGTGTaGATCAGCCATAACCATTGG +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFRNRPV*ISHNHW
Trigger: CCAATGGTTATGGCTGATCAACACAGGTCTGTTTCT...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCACCGATCCACAATTaGCTGCAATGTGAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: KRETENLMILYKLEASALPPIHN*LQCEAS
Trigger: GCTTGCTTCACATTGCAGCAAATTGTGGATCGGTGG...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCCAAAGTACAATGGAGTaGCTCCTGATACATTTGGCC +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFQSTME*LLIHLA
Trigger: GGCCAAATGTATCAGGAGCAACTCCATTGTACTTTG...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCACAAAGTACAATGGAGTaGCTCCTGATACATTTGGCC +
Preference number: 5 (lower is better)
Translates to: TSAILNCASVVRGVFQTSQSTME*LLIHLA
Trigger: GGCCAAATGTATCAGGAGCAACTCCATTGTACTTTG...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTAAGGCACCTCTTCCATaGCTCCAAACACATCAGTCT +
Preference number: 5 (lower is better)
Translates to: RETENLMILYKLEASALPKAPLP*LQTHQS
Trigger: AGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTGGGTATTCAGGTAACTaGAGCATGTTGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: NLMILYKLEASALPMGCIGYSGN*SMLMHV
Trigger: CACATGCATCAACATGCTCAAGTTACCTGAATACCC...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCGGGTATTCAGGTAACTaGAGCATGTTGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFGYSGN*SMLMHV
Trigger: CACATGCATCAACATGCTCAAGTTACCTGAATACCC...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCTTCTGCCATTCTGAATaGTGCATCAGTAGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFFCHSE*CISSQR
Trigger: CCTCTGACTACTGATGCACAATTCAGAATGGCAGAA...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTTTCTGCCATTCTGAATaGTGCATCAGTAGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: NLMILYKLEASALPMGCIFCHSE*CISSQR
Trigger: CCTCTGACTACTGATGCACAATTCAGAATGGCAGAA...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AGCAGTAGCTCCAATTCATATTCATCAAAAAGCTGTATGAGGGAGGGTGGAATGTTCTGCCATTCTGAATaGTGCATCAGTAGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: SSSSNSYSSKSCMREGGMFCHSE*CISSQR
Trigger: CCTCTGACTACTGATGCACAATTCAGAATGGCAGAA...CATTCCACCCTCCCTCATACAGCTTTTTGATGAATATGAATTGGAGCTACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp TGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATGGCACAGCAGCGATTGTTATCTGGCAGATATTaGGCTCCTCGTAATAGTAGG +
Preference number: 5 (lower is better)
Translates to: CMCLKLVKDLEYMAQQRLLSGRY*APRNSR
Trigger: CCTACTATTACGAGGAGCCAAATATCTGCCAGATAA...CAATCGCTGCTGTGCCATATACTCCAAATCTTTTACCAACTTCAAGCACATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CAA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTAGCAATTCCAGAGGCTaGAACACCTGGCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: ILNITNPSVSISSCMHVPSNSRG*NTWLLG
Trigger: TCCAAGAAGCCAGGTGTTCAAGCCTCTGGAATTGCT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CAA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGCAATTCCAGAGGCTaGAACACCTGGCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LLTFSQITSAILNCASVVSNSRG*NTWLLG
Trigger: TCCAAGAAGCCAGGTGTTCAAGCCTCTGGAATTGCT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTAAGGCACCTCTTCCATaGCTCCAAACACATCAGTCT +
Preference number: 5 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPKAPLP*LQTHQS
Trigger: AGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTT...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTAGCGATTGTAAAGTTTaGCAATCCACTTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: NLMILYKLEASALPMGCISDCKV*QSTSTH
Trigger: ATGGGTGGAAGTGGATTGCAAAACTTTACAATCGCT...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp CAGGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAAAAGTTGGTAAAAGATTaGGAGTATATGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: QVSKAPLPLLQTHQSQQKKLVKD*EYMAQQ
Trigger: CTGCTGTGCCATATACTCCAAATCTTTTACCAACTT...TTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCGGTAACTTGAGCATGTaGATGCATGTGCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFGNLSM*MHVLEV
Trigger: AACTTCAAGCACATGCATCAACATGCTCAAGTTACC...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp GGTTTCAAAGGCACCTCTTCCATTGCTCCAAACACATCAGTCTCAACAGAAAAAGGTAACTTGAGCATGTaGATGCATGTGCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: GFKGTSSIAPNTSVSTEKGNLSM*MHVLEV
Trigger: AACTTCAAGCACATGCATCAACATGCTCAAGTTACC...TTTTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTGACTTCATTATGCCATaGTGTAACCATAGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RETENLMILYKLEASALPDFIMP*CNHSCH
Trigger: GTGGCAGCTATGGTTACACAATGGCATAATGAAGTC...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS TCA 90 bp AAGTATTGGCAAGGATGTGGAGAAATTGCTGCTGGGAATGTAAAATaGTGCAGCCTCTGTGGAAAACAGTATGCAAGTTCCTCAACAAAA +
Preference number: 5 (lower is better)
Translates to: KYWQGCGEIAAGNVK*CSLCGKQYASSSTK
Trigger: TTTTGTTGAGGAACTTGCATACTGTTTTCCACAGAGGCTGCATCATTTTACATTCCCAGCAGCAATTTCTCCACATCCTTGCCAATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS-3UTR CAA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTAGAAACAGACCTGTGTaGATCAGCCATAACCATTGG +
Preference number: 5 (lower is better)
Translates to: IFPNYFCHSELCISSQRSRNRPV*ISHNHW
Trigger: CCAATGGTTATGGCTGATCAACACAGGTCTGTTTCT...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCAAAGTACAATGGAGTaGCTCCTGATACATTTGGCC +
Preference number: 5 (lower is better)
Translates to: KRETENLMILYKLEASALQSTME*LLIHLA
Trigger: GGCCAAATGTATCAGGAGCAACTCCATTGTACTTTG...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTTTATCTGGCAGATATTaGGCTCCTCGTAATAGTAGG +
Preference number: 5 (lower is better)
Translates to: RETENLMILYKLEASALPLSGRY*APRNSR
Trigger: CCTACTATTACGAGGAGCCAAATATCTGCCAGATAA...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGTACTGGCTTTCACTTaGCTGAGACAAATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLTFSQITSAILNCASVVVLAFT*LRQMLQ
Trigger: CTGGAGCATTTGTCTCAGCAAAGTGAAAGCCAGTAC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGGTACTGGCTTTCACTTaGCTGAGACAAATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRVLAFT*LRQMLQ
Trigger: CTGGAGCATTTGTCTCAGCAAAGTGAAAGCCAGTAC...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp ATTTGGAGTATATGGCACAGCAGCGATTGTAAAGTTTTGCAATCCACTTCCACCTCCCTTGCTTTAGCTTaGCACAATTTGCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: IWSIWHSSDCKVLQSTSTSLALA*HNLLLT
Trigger: TGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGGA...GGTGGAAGTGGATTGCAAAACTTTACAATCGCTGCTGTGCCATATACTCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp ACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCATCCCTTGCTTTAGCTTaGCACAATTTGCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: TSAILNCASVVRGVFQTSSLALA*HNLLLT
Trigger: TGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGGA...TGAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAATGGATGCCACATCTaGGTAATTTACAGGAATACC +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFNGCHI*VIYRNT
Trigger: GGTATTCCTGTAAATTACCAAGATGTGGCATCCATT...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCAAGGCACCTCTTCCATaGCTCCAAACACATCAGTCT +
Preference number: 5 (lower is better)
Translates to: EKRETENLMILYKLEASAKAPLP*LQTHQS
Trigger: AGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTT...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTAGCGATTGTAAAGTTTaGCAATCCACTTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: RETENLMILYKLEASALPSDCKV*QSTSTH
Trigger: ATGGGTGGAAGTGGATTGCAAAACTTTACAATCGCT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCAAGTTGGTAAAAGATTaGGAGTATATGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFKLVKD*EYMAQQ
Trigger: CTGCTGTGCCATATACTCCAAATCTTTTACCAACTT...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTGGGTATTCAGGTAACTaGAGCATGTTGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: IFPNYFCHSELCISSQRSGYSGN*SMLMHV
Trigger: CACATGCATCAACATGCTCAAGTTACCTGAATACCC...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTATGGGTTGCATTACAAGAAGTCTGTCCTaGAGTATTTCTTTACTTGGG +
Preference number: 5 (lower is better)
Translates to: NLMILYKLEASALPMGCITRSLS*SISLLG
Trigger: CCCAAGTAAAGAAATACTCAAGGACAGACTTCTTGT...AATGCAACCCATAGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp TACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTTTTCCAGACTTCACAAGAAGTCTGTCCTaGAGTATTTCTTTACTTGGG +
Preference number: 5 (lower is better)
Translates to: YFCHSELCISSQRSFPDFTRSLS*SISLLG
Trigger: CCCAAGTAAAGAAATACTCAAGGACAGACTTCTTGT...GAAGTCTGGAAAACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGGACTTCATTATGCCATaGTGTAACCATAGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: KRETENLMILYKLEASALDFIMP*CNHSCH
Trigger: GTGGCAGCTATGGTTACACAATGGCATAATGAAGTC...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTTTCTGCCATTCTGAATaGTGCATCAGTAGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPFCHSE*CISSQR
Trigger: CCTCTGACTACTGATGCACAATTCAGAATGGCAGAA...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp TGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATGGCACAGCAGCGATTGAAGGTGGTTATCTATTaGAAAACTCAGAAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: CMCLKLVKDLEYMAQQRLKVVIY*KTQKAV
Trigger: CACTGCCTTCTGAGTTTTCAAATAGATAACCACCTT...CAATCGCTGCTGTGCCATATACTCCAAATCTTTTACCAACTTCAAGCACATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS GCA 90 bp GGTATATATCCAAAAGAACTGAAAGCACGGACTCAAAGAAGTATCTaGGCATACAGCAGCATTATTCACAATAGCCAAATGGTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: GIYPKELKARTQRSI*AYSSIIHNSQMVEA
Trigger: TGCTTCTACCATTTGGCTATTGTGAATAATGCTGCTGTATGCGCAGATACTTCTTTGAGTCCGTGCTTTCAGTTCTTTTGGATATATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS-3UTR CAA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTCAACTTCAGCAAGGCTaGTTAGAATCTTTAGGTACT +
Preference number: 5 (lower is better)
Translates to: RETENLMILYKLEASALPQLQQG*LESLGT
Trigger: AGTACCTAAAGATTCTAACAAGCCTTGCTGAAGTTG...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp AGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGCCTAATGGAAGCAGCATCTaGATCTTGGCCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: RETENLMILYKLEASALPNGSSI*ILAFLF
Trigger: AAACAAAAAGGCCAAGATCAAGATGCTGCTTCCATT...AGGCAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp CTTGGGTATTCAGGTAACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAATCCCTTGCTTTAGCTTaGCACAATTTGCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: LGYSGNLSMLMHVLEVGKSLALA*HNLLLT
Trigger: TGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGGA...TTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTTACCTGAATACCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp TCGAAGTTCAGTAACAAGCTGGACGTACTCCGCTTTATTATTTTGTGTCACAAGAATGGATGCCACATCTaGGTAATTTACAGGAATACC +
Preference number: 5 (lower is better)
Translates to: SKFSNKLDVLRFIILCHKNGCHI*VIYRNT
Trigger: GGTATTCCTGTAAATTACCAAGATGTGGCATCCATT...CTTGTGACACAAAATAATAAAGCGGAGTACGTCCAGCTTGTTACTGAACTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATAAGGCACCTCTTCCATaGCTCCAAACACATCAGTCT +
Preference number: 5 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYKAPLP*LQTHQS
Trigger: AGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTT...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp TATGGCACAGCAGCGATTGTAAAGTTTTGCAATCCACTTCCACCCATGATATTACTCCGCTTTATTATTTaGTGTCACAAGAATACTCCC +
Preference number: 5 (lower is better)
Translates to: YGTAAIVKFCNPLPPMILLRFII*CHKNTP
Trigger: GGGAGTATTCTTGTGACACAAAATAATAAAGCGGAG...TAATATCATGGGTGGAAGTGGATTGCAAAACTTTACAATCGCTGCTGTGCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGGGTAACTTGAGCATGTaGATGCATGTGCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: KRETENLMILYKLEASALGNLSM*MHVLEV
Trigger: AACTTCAAGCACATGCATCAACATGCTCAAGTTACC...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp CACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAGAAAACACCCTGGTAACTTGAGCATGTaGATGCATGTGCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: HTSWMTSYNISEIRRKHPGNLSM*MHVLEV
Trigger: AACTTCAAGCACATGCATCAACATGCTCAAGTTACC...AGGGTGTTTTCTCCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCGGGTATTCAGGTAACTaGAGCATGTTGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: EKRETENLMILYKLEASAGYSGN*SMLMHV
Trigger: CACATGCATCAACATGCTCAAGTTACCTGAATACCC...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGGGTATTCAGGTAACTaGAGCATGTTGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: LLTFSQITSAILNCASVVGYSGN*SMLMHV
Trigger: CACATGCATCAACATGCTCAAGTTACCTGAATACCC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGGGGTATTCAGGTAACTaGAGCATGTTGATGCATGTG +
Preference number: 5 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRGYSGN*SMLMHV
Trigger: CACATGCATCAACATGCTCAAGTTACCTGAATACCC...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp CTTGGGTATTCAGGTAACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAACAAGAAGTCTGTCCTaGAGTATTTCTTTACTTGGG +
Preference number: 5 (lower is better)
Translates to: LGYSGNLSMLMHVLEVGKTRSLS*SISLLG
Trigger: CCCAAGTAAAGAAATACTCAAGGACAGACTTCTTGT...TTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTTACCTGAATACCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCGACTTCATTATGCCATaGTGTAACCATAGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLTFSQITSAILNCASVVDFIMP*CNHSCH
Trigger: GTGGCAGCTATGGTTACACAATGGCATAATGAAGTC...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS TCA 90 bp ATTTACAATTATTTGCTTTCATGTGGCTCTCTATTGAAGTGGGGCTaGTTTGAGGGCCCAAACAAGTCATATTTACATCTATATCCCTGG +
Preference number: 5 (lower is better)
Translates to: IYNYLLSCGSLLKWG*FEGPNKSYLHLYPW
Trigger: CCAGGGATATAGATGTAAATATGACTTGTTTGGGCCCTCAAATCAGCCCCACTTCAATAGAGAGCCACATGAAAGCAAATAATTGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS-3UTR CAA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATAGAAACAGACCTGTGTaGATCAGCCATAACCATTGG +
Preference number: 5 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYRNRPV*ISHNHW
Trigger: CCAATGGTTATGGCTGATCAACACAGGTCTGTTTCT...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS-3UTR CAA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTTTATCTGGCAGATATTaGGCTCCTCGTAATAGTAGG +
Preference number: 5 (lower is better)
Translates to: ILNITNPSVSISSCMHVPLSGRY*APRNSR
Trigger: CCTACTATTACGAGGAGCCAAATATCTGCCAGATAA...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CAA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGCGATTGTAAAGTTTaGCAATCCACTTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: LLTFSQITSAILNCASVVSDCKV*QSTSTH
Trigger: ATGGGTGGAAGTGGATTGCAAAACTTTACAATCGCT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCAGCGATTGTAAAGTTTaGCAATCCACTTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: EKRETENLMILYKLEASASDCKV*QSTSTH
Trigger: ATGGGTGGAAGTGGATTGCAAAACTTTACAATCGCT...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCCTGAAGTTGGTAAAAGATTaGGAGTATATGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: KRETENLMILYKLEASALKLVKD*EYMAQQ
Trigger: CTGCTGTGCCATATACTCCAAATCTTTTACCAACTT...CAGGGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATGACTTCATTATGCCATaGTGTAACCATAGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYDFIMP*CNHSCH
Trigger: GTGGCAGCTATGGTTACACAATGGCATAATGAAGTC...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp ATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAGAGGAGTAAGGTGGTTATCTATTaGAAAACTCAGAAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: IFPNYFCHSELCISSQRSKVVIY*KTQKAV
Trigger: CACTGCCTTCTGAGTTTTCAAATAGATAACCACCTT...ACTCCTCTGACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CAA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCCAACTTCAGCAAGGCTaGTTAGAATCTTTAGGTACT +
Preference number: 5 (lower is better)
Translates to: LLTFSQITSAILNCASVVQLQQG*LESLGT
Trigger: AGTACCTAAAGATTCTAACAAGCCTTGCTGAAGTTG...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAATGGAAGCAGCATCTaGATCTTGGCCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRNGSSI*ILAFLF
Trigger: AAACAAAAAGGCCAAGATCAAGATGCTGCTTCCATT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
CDS-3UTR CAA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGTCCCTTGCTTTAGCTTaGCACAATTTGCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRSLALA*HNLLLT
Trigger: TGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGGA...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp GAAAAGAGAGAAACAGAAAACCTGATGATCCTTTATAAATTGGAAGCATCAGCCTCCCTTGCTTTAGCTTaGCACAATTTGCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: EKRETENLMILYKLEASASLALA*HNLLLT
Trigger: TGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGGA...GGCTGATGCTTCCAATTTATAAAGGATCATCAGGTTTTCTGTTTCTCTCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AAAATCCATTGCAAATTTTTCGCATATTCTGGATCAATGGATGCCACATCTTGGAATGGATGCCACATCTaGGTAATTTACAGGAATACC +
Preference number: 5 (lower is better)
Translates to: KIHCKFFAYSGSMDATSWNGCHI*VIYRNT
Trigger: GGTATTCCTGTAAATTACCAAGATGTGGCATCCATT...CCAAGATGTGGCATCCATTGATCCAGAATATGCGAAAAATTTGCAATGGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416605.6
ENST00000517424.1
CDS-3UTR CAA 90 bp TTGTTGACATTTTCCCAAATTACTTCTGCCATTCTGAATTGTGCATCAGTAGTCAATGGATGCCACATCTaGGTAATTTACAGGAATACC +
Preference number: 5 (lower is better)
Translates to: LLTFSQITSAILNCASVVNGCHI*VIYRNT
Trigger: GGTATTCCTGTAAATTACCAAGATGTGGCATCCATT...GACTACTGATGCACAATTCAGAATGGCAGAAGTAATTTGGGAAAATGTCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000416605.6
ENST00000517424.1
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTCTCCGCTTTATTATTTaGTGTCACAAGAATACTCCC +
Preference number: 5 (lower is better)
Translates to: ILNITNPSVSISSCMHVPLRFII*CHKNTP
Trigger: GGGAGTATTCTTGTGACACAAAATAATAAAGCGGAG...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CAA 90 bp ATCCTAAACATAACAAATCCTTCCGTTAGCATTTCTTCGTGTATGCATGTTCCTAAGTTGGTAAAAGATTaGGAGTATATGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: ILNITNPSVSISSCMHVPKLVKD*EYMAQQ
Trigger: CTGCTGTGCCATATACTCCAAATCTTTTACCAACTT...AGGAACATGCATACACGAAGAAATGCTAACGGAAGGATTTGTTATGTTTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CAA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGAAGTTGGTAAAAGATTaGGAGTATATGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRKLVKD*EYMAQQ
Trigger: CTGCTGTGCCATATACTCCAAATCTTTTACCAACTT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AACCACCCAAAAATTCAAAAACCCACCAACATCCAAGTGATATTAGGCACATATACAAGAAGTCTGTCCTaGAGTATTTCTTTACTTGGG +
Preference number: 5 (lower is better)
Translates to: NHPKIQKPTNIQVILGTYTRSLS*SISLLG
Trigger: CCCAAGTAAAGAAATACTCAAGGACAGACTTCTTGT...ATATGTGCCTAATATCACTTGGATGTTGGTGGGTTTTTGAATTTTTGGGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262903.9
ENST00000416605.6
CDS-3UTR CAA 90 bp CATGCAAAAGAACACACCAGCTGGATGACCTCATATAATATATCAGAAATTAGGACAAGAAGTCTGTCCTaGAGTATTTCTTTACTTGGG +
Preference number: 5 (lower is better)
Translates to: HAKEHTSWMTSYNISEIRTRSLS*SISLLG
Trigger: CCCAAGTAAAGAAATACTCAAGGACAGACTTCTTGT...CCTAATTTCTGATATATTATATGAGGTCATCCAGCTGGTGTGTTCTTTTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000518402.5
ENST00000518503.5
CDS-3UTR CAA 90 bp AACTTGAGCATGTTGATGCATGTGCTTGAAGTTGGTAAAAGATTTGGAGTATATCAACTTCAGCAAGGCTaGTTAGAATCTTTAGGTACT +
Preference number: 5 (lower is better)
Translates to: NLSMLMHVLEVGKRFGVYQLQQG*LESLGT
Trigger: AGTACCTAAAGATTCTAACAAGCCTTGCTGAAGTTG...ATATACTCCAAATCTTTTACCAACTTCAAGCACATGCATCAACATGCTCAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS CCA 90 bp CTTTCTTTTAAAGACCGCCATGGAAGGAGATTATACAACCATATTTaGAACCTTAGAAAATGTTTGAACTATTCTGCCAGGAAATTCTTC +
Preference number: 5 (lower is better)
Translates to: LSFKDRHGRRLYNHI*NLRKCLNYSARKFF
Trigger: GAAGAATTTCCTGGCAGAATAGTTCAAACATTTTCTAAGGTTCCAAATATGGTTGTATAATCTCCTTCCATGGCGGTCTTTAAAAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369127.8
CDS CCA 72 bp CCGGCGGCCTCCGCGCCCAGAGCCCTACATCTCGCCTaGGCCCGTCCAGCAGGCGGAGACGCGGGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: PAASAPRALHLA*ARPAGGDAGLP
Trigger: GGGCAAGCCCGCGTCTCCGCCTGCTGGACGGGCCCAGGCGAGATGTAGGGCTCTGGGCGCGGAGGCCGCCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS TCA 72 bp CGGTGCGCGCGCGGCGCAGCGAGCGCGTCAGGCGGTTaGGTTGCTCCATCGCTCTCTCCATCCTCGGCGCGC +
Preference number: 6 (lower is better)
Translates to: RCARGAASASGG*VAPSLSPSSAR
Trigger: GCGCGCCGAGGATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTCGCTGCGCCGCGCGCGCACCG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS GCA 72 bp CGCGCGCGGCGCAGCGAGCGCGTCAGGCGGTTGAGTTaGTCCATCGCTCTCTCCATCCTCGGCGCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RARRSERVRRLS*SIALSILGAPS
Trigger: GGAGGGCGCGCCGAGGATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTCGCTGCGCCGCGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS CAA 72 bp GCGCGCGCGGCGCAGCGAGCGCGTCAGGCGGTTGAGTaGCTCCATCGCTCTCTCCATCCTCGGCGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: ARAAQRARQAVE*LHRSLHPRRAL
Trigger: GAGGGCGCGCCGAGGATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTCGCTGCGCCGCGCGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS CAA 90 bp GGCAACTCCACGGTGCGCGCGCGGCGCAGCGAGCGCGTCAGGCGGTaGAGTTGCTCCATCGCTCTCTCCATCCTCGGCGCGCCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: GNSTVRARRSERVRR*SCSIALSILGAPSA
Trigger: CGCGGAGGGCGCGCCGAGGATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTCGCTGCGCCGCGCGCGCACCGTGGAGTTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS CAA 90 bp CTCCACGGTGCGCGCGCGGCGCAGCGAGCGCGTCAGGCGGTTGAGTaGCTCCATCGCTCTCTCCATCCTCGGCGCGCCCTCCGCGATCCT +
Preference number: 6 (lower is better)
Translates to: LHGARAAQRARQAVE*LHRSLHPRRALRDP
Trigger: AGGATCGCGGAGGGCGCGCCGAGGATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTCGCTGCGCCGCGCGCGCACCGTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS CAA 72 bp ACGGTGCGCGCGCGGCGCAGCGAGCGCGTCAGGCGGTaGAGTTGCTCCATCGCTCTCTCCATCCTCGGCGCG +
Preference number: 6 (lower is better)
Translates to: TVRARRSERVRR*SCSIALSILGA
Trigger: CGCGCCGAGGATGGAGAGAGCGATGGAGCAACTCAACCGCCTGACGCGCTCGCTGCGCCGCGCGCGCACCGT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000519645.5
CDS TCA 72 bp CTGGCTAACACGGTGAAACCCCGTCTCTACGTCTTGTaGCCGTTCTGGCAGGCAACATGCAGTGCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: LANTVKPRLYVL*PFWQATCSAVC
Trigger: GCAGACAGCACTGCATGTTGCCTGCCAGAACGGTCACAAGACGTAGAGACGGGGTTTCACCGTGTTAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS TCA 72 bp GACGTCAGGAGATTGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTACGTCTTGTGACCGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: DVRRLRPSWLTR*NPVSTSCDRSG
Trigger: GCCAGAACGGTCACAAGACGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416605.6
CDS TCA 72 bp TCTTTAAAAGGCTGTAGTCCCAGCTACTTGAAAGACTaGGCTGGGAGGATCGCTTCAGCCCAGGAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: SLKGCSPSYLKD*AGRIASAQEAD
Trigger: GTCTGCCTCCTGGGCTGAAGCGATCCTCCCAGCTCAGTCTTTCAAGTAGCTGGGACTACAGCCTTTTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517995.5
CDS GCA 72 bp TGCCCCATGGCATCCTCAACATCAACATCACTGACATaGTGCACAAGGTCATGGAGTAGTTCTGTCCGCCCA +
Preference number: 6 (lower is better)
Translates to: CPMASSTSTSLT*CTRSWSSSVRP
Trigger: TGGGCGGACAGAACTACTCCATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTGAGGATGCCATGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000524020.1
CDS GCA 72 bp CCCATGGCATCCTCAACATCAACATCACTGACATGCTaGACAAGGTCATGGAGTAGTTCTGTCCGCCCATTC +
Preference number: 6 (lower is better)
Translates to: PMASSTSTSLTC*TRSWSSSVRPF
Trigger: GAATGGGCGGACAGAACTACTCCATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTGAGGATGCCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000524020.1
CDS CAA 90 bp TCACCCGTAATGAGGGCTCTTCCATACTCACAACGGTTGACAGATTaGGAGTCCCTGAACTGCTTAAAGAAGGGCAAGAAGCACCCAGCT +
Preference number: 6 (lower is better)
Translates to: SPVMRALPYSQRLTD*ESLNCLKKGKKHPA
Trigger: AGCTGGGTGCTTCTTGCCCTTCTTTAAGCAGTTCAGGGACTCCAAATCTGTCAACCGTTGTGAGTATGGAAGAGCCCTCATTACGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369127.8
CDS CAA 90 bp GCATCCCTCTCACCCGTAATGAGGGCTCTTCCATACTCACAACGGTaGACAGATTTGGAGTCCCTGAACTGCTTAAAGAAGGGCAAGAAG +
Preference number: 6 (lower is better)
Translates to: ASLSPVMRALPYSQR*TDLESLNCLKKGKK
Trigger: CTTCTTGCCCTTCTTTAAGCAGTTCAGGGACTCCAAATCTGTCAACCGTTGTGAGTATGGAAGAGCCCTCATTACGGGTGAGAGGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369127.8
CDS CCA 72 bp TCAACATCAACATCACTGACATGCTGCACAAGGTCATaGAGTAGTTCTGTCCGCCCATTCACAGCCAGCCAA +
Preference number: 6 (lower is better)
Translates to: STSTSLTCCTRS*SSSVRPFTASQ
Trigger: TTGGCTGGCTGTGAATGGGCGGACAGAACTACTCCATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262903.9
ENST00000369125.6
ENST00000416605.6
ENST00000524020.1
CDS CCA 72 bp TCCACTTCCACCCATGATATTAGCAAACCCACCATGTaGGACCCTGGAACTGCCCGTAACAAACTGAATAAC +
Preference number: 6 (lower is better)
Translates to: STSTHDISKPTM*DPGTARNKLNN
Trigger: GTTATTCAGTTTGTTACGGGCAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518503.5
CDS CAA 90 bp CTCCATGGAACCGTACAGCAATCCCTTGCTTTAGCTTTGCACAATTaGCTTTTGACACAACTTCACAGCTACTCCTCTGTGAACCAGCAG +
Preference number: 6 (lower is better)
Translates to: LHGTVQQSLALALHN*LLTQLHSYSSVNQQ
Trigger: CTGCTGGTTCACAGAGGAGTAGCTGTGAAGTTGTGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGGATTGCTGTACGGTTCCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517424.1
ENST00000517995.5
CDS CAA 72 bp ATGAGGGCTCTTCCATACTCACAACGGTTGACAGATTaGGAGTCCCTGAACTGCTTAAAGAAGGGCAAGAAG +
Preference number: 6 (lower is better)
Translates to: MRALPYSQRLTD*ESLNCLKKGKK
Trigger: CTTCTTGCCCTTCTTTAAGCAGTTCAGGGACTCCAAATCTGTCAACCGTTGTGAGTATGGAAGAGCCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369127.8
CDS CAA 72 bp TCACCCGTAATGAGGGCTCTTCCATACTCACAACGGTaGACAGATTTGGAGTCCCTGAACTGCTTAAAGAAG +
Preference number: 6 (lower is better)
Translates to: SPVMRALPYSQR*TDLESLNCLKK
Trigger: CTTCTTTAAGCAGTTCAGGGACTCCAAATCTGTCAACCGTTGTGAGTATGGAAGAGCCCTCATTACGGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369127.8
CDS CAA 90 bp TGCCTTCTTCTCCATGGAACCGTACAGCAATCCCTTGCTTTAGCTTaGCACAATTTGCTTTTGACACAACTTCACAGCTACTCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: CLLLHGTVQQSLALA*HNLLLTQLHSYSSV
Trigger: CACAGAGGAGTAGCTGTGAAGTTGTGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGGATTGCTGTACGGTTCCATGGAGAAGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517424.1
ENST00000517995.5
CDS TCA 72 bp CAAGGATGTGGAGAAATTGCTGCTGGGAATGTAAAATaGTGCAGCCTCTGTGGAAAACAGTATGCAAGTTCC +
Preference number: 6 (lower is better)
Translates to: QGCGEIAAGNVK*CSLCGKQYASS
Trigger: GGAACTTGCATACTGTTTTCCACAGAGGCTGCATCATTTTACATTCCCAGCAGCAATTTCTCCACATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS GCA 72 bp ACAAGCTGGACGTACTCCGCCTGTGCTTTTATGATATaGATGAATCTTGACATCAACTCAGGACATTCAAGG +
Preference number: 6 (lower is better)
Translates to: TSWTYSACAFMI*MNLDINSGHSR
Trigger: CCTTGAATGTCCTGAGTTGATGTCAAGATTCATGCATATCATAAAAGCACAGGCGGAGTACGTCCAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369125.6
CDS GCA 72 bp GACACCCCTCCACATTTCCATAAGCTATACTATGCTTaGAACTGGCCACAGCACATACCTCAATATTGCATT +
Preference number: 6 (lower is better)
Translates to: DTPPHFHKLYYA*NWPQHIPQYCI
Trigger: AATGCAATATTGAGGTATGTGCTGTGGCCAGTTGCAAGCATAGTATAGCTTATGGAAATGTGGAGGGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS TCA 72 bp GCTTTCATGTGGCTCTCTATTGAAGTGGGGCTGATTTaGGGGCCCAAACAAGTCATATTTACATCTATATCC +
Preference number: 6 (lower is better)
Translates to: AFMWLSIEVGLI*GPKQVIFTSIS
Trigger: GGATATAGATGTAAATATGACTTGTTTGGGCCCTCAAATCAGCCCCACTTCAATAGAGAGCCACATGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS TCA 72 bp AGGCAATTCCACTTCTGGGTATATATCCAAAAGAACTaGAAGCACGGACTCAAAGAAGTATCTGCGCATACA +
Preference number: 6 (lower is better)
Translates to: RQFHFWVYIQKN*KHGLKEVSAHT
Trigger: TGTATGCGCAGATACTTCTTTGAGTCCGTGCTTTCAGTTCTTTTGGATATATACCCAGAAGTGGAATTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS GCA 72 bp CCAAAAGAACTGAAAGCACGGACTCAAAGAAGTATCTaGGCATACAGCAGCATTATTCACAATAGCCAAATG +
Preference number: 6 (lower is better)
Translates to: PKELKARTQRSI*AYSSIIHNSQM
Trigger: CATTTGGCTATTGTGAATAATGCTGCTGTATGCGCAGATACTTCTTTGAGTCCGTGCTTTCAGTTCTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS CCA 72 bp TTACAAGTATTGGCAAGGATGTGGAGAAATTGCTGCTaGGAATGTAAAATGATGCAGCCTCTGTGGAAAACA +
Preference number: 6 (lower is better)
Translates to: LQVLARMWRNCC*ECKMMQPLWKT
Trigger: TGTTTTCCACAGAGGCTGCATCATTTTACATTCCCAGCAGCAATTTCTCCACATCCTTGCCAATACTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS CCA 72 bp TCCACTTCCACCCATGATATTAGCAAACCCACCATGTaGGACCCTGGAACTAAGAGTTTATATCTTAATACA +
Preference number: 6 (lower is better)
Translates to: STSTHDISKPTM*DPGTKSLYLNT
Trigger: TGTATTAAGATATAAACTCTTAGTTCCAGGGTCCCACATGGTGGGTTTGCTAATATCATGGGTGGAAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS TCA 72 bp ACATTTACAATTATTTGCTTTCATGTGGCTCTCTATTaGAGTGGGGCTGATTTGAGGGCCCAAACAAGTCAT +
Preference number: 6 (lower is better)
Translates to: TFTIICFHVALY*SGADLRAQTSH
Trigger: ATGACTTGTTTGGGCCCTCAAATCAGCCCCACTTCAATAGAGAGCCACATGAAAGCAAATAATTGTAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518228.1
CDS CAA 90 bp AGCAAGCACTGCACTGTTGCTGTAAGGCCTTCATTATTACAAATGTaGACATCAGCGCTATATTCTAATAATTTACTCATACATTTCTTC +
Preference number: 6 (lower is better)
Translates to: SKHCTVAVRPSLLQM*TSALYSNNLLIHFF
Trigger: GAAGAAATGTATGAGTAAATTATTAGAATATAGCGCTGATGTCAACATTTGTAATAATGAAGGCCTTACAGCAACAGTGCAGTGCTTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519645.5