Pregenerated sensors for HACD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165996Ensembl transcript IDs: ENST00000326961.6, ENST00000361271.8, ENST00000466335.1, ENST00000471481.1, ENST00000498812.5, ENST00000632169.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATGGAATTCAGAATGAAAGGAGTCTGTCCAAAGATCATACCCCAAAATGTTTAGTTCTGAGTACAGCATaGTCATCTTCCTCATCATCG | + |
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Preference number: 2 (lower is better) Translates to: NGIQNERSLSKDHTPKCLVLSTA*SSSSSS Trigger: CGATGATGAGGAAGATGATCATGCTGTACTCAGAAC...TAAACATTTTGGGGTATGATCTTTGGACAGACTCCTTTCATTCTGAATTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCATTTAATCCTGTTTTCTTCACATaGGGCAAGGCAGCGTATATT | + |
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Preference number: 2 (lower is better) Translates to: QVILVILEKAPCLQRSFNPVFFT*GKAAYI Trigger: AATATACGCTGCCTTGCCGCATGTGAAGAAAACAGG...ATTAAATGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498812.5 |
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| 3UTR CAA 90 bp | ACTTGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTaGCAGAGATCATTTAATCATCCTTTTCTACAATCACCTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: TWTQVILVILEKAPC*QRSFNHPFLQSPLH Trigger: ATGGAGAGGTGATTGTAGAAAAGGATGATTAAATGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498812.5 |
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| 3UTR-3UTR TCA 90 bp | AATGGAATTCAGAATGAAAGGAGTCTGTCCAAAGATCATACCCCAAAATGTTTATCTCAACCAAAGTTCTaGGTACAGCATGATCATCTT | + |
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Preference number: 2 (lower is better) Translates to: NGIQNERSLSKDHTPKCLSQPKF*VQHDHL Trigger: AAGATGATCATGCTGTACTCAGAACTTTGGTTGAGA...TAAACATTTTGGGGTATGATCTTTGGACAGACTCCTTTCATTCTGAATTCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCAAATTATATCCACGCTTCCAAACACTGTTATTAGTCATAATGCTGCCTCTACCCAAAAGTTACTaGTATTTGCACAGTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: FSKLYPRFQTLLLVIMLPLPKSY*YLHSSC Trigger: ACAAGAACTGTGCAAATATCAGTAACTTTTGGGTAG...AGGCAGCATTATGACTAATAACAGTGTTTGGAAGCGTGGATATAATTTGCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| 3UTR TCA 72 bp | TATACCTCCTATAACAGCATTCTGGCATCGTGGGGCTaGAACACGAATTTTAATTCTCTGGCGTTAGCACAC | + |
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Preference number: 3 (lower is better) Translates to: YTSYNSILASWG*NTNFNSLALAH Trigger: GTGTGCTAACGCCAGAGAATTAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGGAGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| 3UTR-3UTR CAA 90 bp | TGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCATGGACTCAGGTAATCTaGGTTATTCTGGAAAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: WTQVILVILEKAPCLQRSWTQVI*VILEKA Trigger: TGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA...TGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000361271.8 ENST00000498812.5 |
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| 3UTR CCA 72 bp | TTAGTTATACCAGTTATACCTCCTATAACAGCATTCTaGCATCGTGGGGCTGAAACACGAATTTTAATTCTC | + |
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Preference number: 3 (lower is better) Translates to: LVIPVIPPITAF*HRGAETRILIL Trigger: GAGAATTAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGGAGGTATAACTGGTATAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR GCA 90 bp | CCTCCTATAACAGCATTCTGGCATCGTGGGGCTGAAACACGAATTTTAATTCTCAGGCGCCGCCGTTGGTaGCGTCCTCGTCGCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PPITAFWHRGAETRILILRRRRW*RPRRWT Trigger: CGTCCAGCGACGAGGACGGCACCAACGGCGGCGCCT...GAGAATTAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CCA 90 bp | TGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCACGCTGGACGCCATGGTaGCCGCGCACCTGGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: WTQVILVILEKAPCLQRSRWTPW*PRTWGT Trigger: CGTCCCCCAGGTGCGCGGCCACCATGGCGTCCAGCG...TGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CCA 90 bp | TGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCACCGAGGCGCCGCCGTTaGTGCCGTCCTCGTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WTQVILVILEKAPCLQRSPRRRR*CRPRRW Trigger: CCAGCGACGAGGACGGCACCAACGGCGGCGCCTCGG...TGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR GCA 90 bp | AAAACTTGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGAGCCGCTGCCCGCTaGCGCCGCTTCCGTCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KTWTQVILVILEKAPCLQRAAAR*RRFRQA Trigger: CGCCTGACGGAAGCGGCGGCAGCGGGCAGCGGCTCT...CTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCAAGTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR GCA 90 bp | TGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCACGTGGGAGGGGACCCTaGCCAGCCTGCAGCCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: WTQVILVILEKAPCLQRSRGRGP*PACSPR Trigger: TCTCGGGCTGCAGGCTGGGCAGGGTCCCCTCCCACG...TGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CCA 90 bp | TGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCACGCACCTGGGGGACGTaGGAGACAGCGGCAGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: WTQVILVILEKAPCLQRSRTWGT*ETAAGA Trigger: CGCTCCTGCCGCTGTCTCCCACGTCCCCCAGGTGCG...TGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CCA 90 bp | TGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCATGGTGGCCGCGCACCTaGGGGACGTGGGAGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: WTQVILVILEKAPCLQRSWWPRT*GTWETA Trigger: CGCTGTCTCCCACGTCCCCCAGGTGCGCGGCCACCA...TGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CCA 90 bp | AACACGAATTTTAATTCTCTGGCGTTAGCACACAAAATAAGCATGCACAGGACACCGAGGCGCCGCCGTTaGTGCCGTCCTCGTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NTNFNSLALAHKISMHRTPRRRR*CRPRRW Trigger: CCAGCGACGAGGACGGCACCAACGGCGGCGCCTCGG...TGTCCTGTGCATGCTTATTTTGTGTGCTAACGCCAGAGAATTAAAATTCGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CCA 90 bp | TATAGAGAAGACTTTCTCAACCAAAGTTCTGAGTACAGCATGATCATCTTCCTCTGCCGTCCTCGTCGCTaGACGCCATGGTGGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: YREDFLNQSSEYSMIIFLCRPRR*TPWWPR Trigger: GCGCGGCCACCATGGCGTCCAGCGACGAGGACGGCA...GAGGAAGATGATCATGCTGTACTCAGAACTTTGGTTGAGAAAGTCTTCTCTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | ATAACAGCATTCTGGCATCGTGGGGCTGAAACACGAATTTTAATTCTCTGGCGTCGATGTCGTAGAAGGTaGGCCAGGCGGTGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITAFWHRGAETRILILWRRCRRR*ARRWPR Trigger: TCTTGGCCACCGCCTGGCTCACCTTCTACGACATCG...ACGCCAGAGAATTAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR GCA 90 bp | AATGGAATTCAGAATGAAAGGAGTCTGTCCAAAGATCATACCCCAAAATGTTTAGTCAGGCGCCCCATGTaGAGCGCGCAGGGGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: NGIQNERSLSKDHTPKCLVRRPM*SAQGAR Trigger: CCGAGCCCCCTGCGCGCTGCACATGGGGCGCCTGAC...TAAACATTTTGGGGTATGATCTTTGGACAGACTCCTTTCATTCTGAATTCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR GCA 90 bp | TTTAGCAAATTATATCCACGCTTCCAAACACTGTTATTAGTCATAATGCTGCCTAGGCGCCGCCGTTGGTaGCGTCCTCGTCGCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: FSKLYPRFQTLLLVIMLPRRRRW*RPRRWT Trigger: CGTCCAGCGACGAGGACGGCACCAACGGCGGCGCCT...AGGCAGCATTATGACTAATAACAGTGTTTGGAAGCGTGGATATAATTTGCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CCA 90 bp | TATTACAAGACCTTTTGCTATTCAATGGAATTCAGAATGAAAGGAGTCTGTCCAACAGCGGCAGGAGCGTaGGAGGGGACCCTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YYKTFCYSMEFRMKGVCPTAAGA*EGTLPS Trigger: GCTGGGCAGGGTCCCCTCCCACGCTCCTGCCGCTGT...TGGACAGACTCCTTTCATTCTGAATTCCATTGAATAGCAAAAGGTCTTGTAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | TATTACAAGACCTTTTGCTATTCAATGGAATTCAGAATGAAAGGAGTCTGTCCACGATGTCGTAGAAGGTaGGCCAGGCGGTGGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: YYKTFCYSMEFRMKGVCPRCRRR*ARRWPR Trigger: TCTTGGCCACCGCCTGGCTCACCTTCTACGACATCG...TGGACAGACTCCTTTCATTCTGAATTCCATTGAATAGCAAAAGGTCTTGTAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | GTTATACCTCCTATAACAGCATTCTGGCATCGTGGGGCTGAAACACGAATTTTAAGAAGGAATAGCGAGTaGTCTCTGTCACAGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: VIPPITAFWHRGAETRILRRNSE*SLSQST Trigger: CGTGGACTGTGACAGAGATCACTCGCTATTCCTTCT...TAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGGAGGTATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CCA 90 bp | ATAACAGCATTCTGGCATCGTGGGGCTGAAACACGAATTTTAATTCTCTGGCGTCCTATAACAGCATTCTaGCATCGTGGGGCTGAAACA | + |
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Preference number: 4 (lower is better) Translates to: ITAFWHRGAETRILILWRPITAF*HRGAET Trigger: TGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGG...ACGCCAGAGAATTAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR TCA 90 bp | TGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCAAGAAGGAATAGCGAGTaGTCTCTGTCACAGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: WTQVILVILEKAPCLQRSRRNSE*SLSQST Trigger: CGTGGACTGTGACAGAGATCACTCGCTATTCCTTCT...TGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | GTTATACCAGTTATACCTCCTATAACAGCATTCTGGCATCGTGGGGCTGAAACAAGTGGTCAAGAAGGCTaGATGTGTAGAAGGAATAGC | + |
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Preference number: 4 (lower is better) Translates to: VIPVIPPITAFWHRGAETSGQEG*MCRRNS Trigger: GCTATTCCTTCTACACATTCAGCCTTCTTGACCACT...TGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGGAGGTATAACTGGTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR GCA 90 bp | CCTATAACAGCATTCTGGCATCGTGGGGCTGAAACACGAATTTTAATTCTCTGGAAGGAGAAACTAAACTaGAAGATATCGCCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PITAFWHRGAETRILILWKEKLN*KISPPG Trigger: GCCAGGTGGCGATATCTTGCAGTTTAGTTTCTCCTT...CCAGAGAATTAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CCA 90 bp | TTCACATGCGGCAAGGCAGCGTATATTGTAAGAAGTTCACCAGCAACTCCAACAATTCTTGAACTCACTTaGACCCCAGTCACAATCACA | + |
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Preference number: 4 (lower is better) Translates to: FTCGKAAYIVRSSPATPTILELT*TPVTIT Trigger: TGTGATTGTGACTGGGGTCCAAGTGAGTTCAAGAAT...TGTTGGAGTTGCTGGTGAACTTCTTACAATATACGCTGCCTTGCCGCATGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498812.5 |
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| CDS-3UTR GCA 90 bp | AATAGATCTGGCACAAGAGGAACACAAATACTGGCAAATACCACGTGTCTCAAGCCTGTTTTCTTCACATaGGGCAAGGCAGCGTATATT | + |
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Preference number: 4 (lower is better) Translates to: NRSGTRGTQILANTTCLKPVFFT*GKAAYI Trigger: AATATACGCTGCCTTGCCGCATGTGAAGAAAACAGG...CTTGAGACACGTGGTATTTGCCAGTATTTGTGTTCCTCTTGTGCCAGATCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CCA 90 bp | GTTATACCAGTTATACCTCCTATAACAGCATTCTGGCATCGTGGGGCTGAAACAATTCTTGAACTCACTTaGACCCCAGTCACAATCACA | + |
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Preference number: 4 (lower is better) Translates to: VIPVIPPITAFWHRGAETILELT*TPVTIT Trigger: TGTGATTGTGACTGGGGTCCAAGTGAGTTCAAGAAT...TGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGGAGGTATAACTGGTATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CCA 90 bp | GTTATACCTCCTATAACAGCATTCTGGCATCGTGGGGCTGAAACACGAATTTTAATGAAGTATGGCAAGTaGTCAAGAAGGCTGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: VIPPITAFWHRGAETRILMKYGK*SRRLNV Trigger: CACATTCAGCCTTCTTGACCACTTGCCATACTTCAT...TAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGGAGGTATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CCA 90 bp | AATAGATCTGGCACAAGAGGAACACAAATACTGGCAAATACCACGTGTCTCAAGGAGGAACACAAATACTaGCAAATACCACGTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: NRSGTRGTQILANTTCLKEEHKY*QIPRVS Trigger: TGAGACACGTGGTATTTGCCAGTATTTGTGTTCCTC...CTTGAGACACGTGGTATTTGCCAGTATTTGTGTTCCTCTTGTGCCAGATCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CCA 90 bp | AATGGAATTCAGAATGAAAGGAGTCTGTCCAAAGATCATACCCCAAAATGTTTACTGGCCTTGAACTTCTaGGCTCAAACGATCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NGIQNERSLSKDHTPKCLLALNF*AQTILL Trigger: CAGGAGGATCGTTTGAGCCCAGAAGTTCAAGGCCAG...TAAACATTTTGGGGTATGATCTTTGGACAGACTCCTTTCATTCTGAATTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | AACACGAATTTTAATTCTCTGGCGTTAGCACACAAAATAAGCATGCACAGGACACACCATAAAGATTCTTaGACTCACTTGGACCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: NTNFNSLALAHKISMHRTHHKDS*THLDPS Trigger: ACTGGGGTCCAAGTGAGTTCAAGAATCTTTATGGTG...TGTCCTGTGCATGCTTATTTTGTGTGCTAACGCCAGAGAATTAAAATTCGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR TCA 90 bp | CAGAGATCATTTAATCATCCTTTTCTACAATCACCTCTCCATGAAGCACCTTTCCACCATAAAGATTCTTaGACTCACTTGGACCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: QRSFNHPFLQSPLHEAPFHHKDS*THLDPS Trigger: ACTGGGGTCCAAGTGAGTTCAAGAATCTTTATGGTG...GAAAGGTGCTTCATGGAGAGGTGATTGTAGAAAAGGATGATTAAATGATCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498812.5 |
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| CDS-3UTR TCA 90 bp | AAAACTTGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGGTTCTGAGTACAGCATaGTCATCTTCCTCATCATCG | + |
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Preference number: 4 (lower is better) Translates to: KTWTQVILVILEKAPCLQVLSTA*SSSSSS Trigger: CGATGATGAGGAAGATGATCATGCTGTACTCAGAAC...CTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCAAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | AACACGAATTTTAATTCTCTGGCGTTAGCACACAAAATAAGCATGCACAGGACACTGGCATCGTGGGGCTaGAACACGAATTTTAATTCT | + |
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Preference number: 4 (lower is better) Translates to: NTNFNSLALAHKISMHRTLASWG*NTNFNS Trigger: AGAATTAAAATTCGTGTTTCAGCCCCACGATGCCAG...TGTCCTGTGCATGCTTATTTTGTGTGCTAACGCCAGAGAATTAAAATTCGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR GCA 90 bp | GTTTGCAGAGATCATTTAATCATCCTTTTCTACAATCACCTCTCCATGAAGCACCCTGTTTTCTTCACATaGGGCAAGGCAGCGTATATT | + |
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Preference number: 4 (lower is better) Translates to: VCRDHLIILFYNHLSMKHPVFFT*GKAAYI Trigger: AATATACGCTGCCTTGCCGCATGTGAAGAAAACAGG...GTGCTTCATGGAGAGGTGATTGTAGAAAAGGATGATTAAATGATCTCTGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498812.5 |
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| CDS-3UTR GCA 90 bp | AATGGAATTCAGAATGAAAGGAGTCTGTCCAAAGATCATACCCCAAAATGTTTACTCAAACGATCCTCCTaGCTCAGTCTTCCAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: NGIQNERSLSKDHTPKCLLKRSS*LSLPKC Trigger: GCACTTTGGAAGACTGAGGCAGGAGGATCGTTTGAG...TAAACATTTTGGGGTATGATCTTTGGACAGACTCCTTTCATTCTGAATTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | GTTATACCTCCTATAACAGCATTCTGGCATCGTGGGGCTGAAACACGAATTTTAATTGGTTTTATACTGTaGGTAATGAGCCACACCATA | + |
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Preference number: 4 (lower is better) Translates to: VIPPITAFWHRGAETRILIGFIL*VMSHTI Trigger: TATGGTGTGGCTCATTACTCACAGTATAAAACCAAT...TAAAATTCGTGTTTCAGCCCCACGATGCCAGAATGCTGTTATAGGAGGTATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CCA 90 bp | TATAGAGAAGACTTTCTCAACCAAAGTTCTGAGTACAGCATGATCATCTTCCTCATTCTTGAACTCACTTaGACCCCAGTCACAATCACA | + |
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Preference number: 4 (lower is better) Translates to: YREDFLNQSSEYSMIIFLILELT*TPVTIT Trigger: TGTGATTGTGACTGGGGTCCAAGTGAGTTCAAGAAT...GAGGAAGATGATCATGCTGTACTCAGAACTTTGGTTGAGAAAGTCTTCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CCA 90 bp | AAAACTTGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGATGAAGTATGGCAAGTaGTCAAGAAGGCTGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: KTWTQVILVILEKAPCLQMKYGK*SRRLNV Trigger: CACATTCAGCCTTCTTGACCACTTGCCATACTTCAT...CTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCAAGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | TATTACAAGACCTTTTGCTATTCAATGGAATTCAGAATGAAAGGAGTCTGTCCACACCATAAAGATTCTTaGACTCACTTGGACCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: YYKTFCYSMEFRMKGVCPHHKDS*THLDPS Trigger: ACTGGGGTCCAAGTGAGTTCAAGAATCTTTATGGTG...TGGACAGACTCCTTTCATTCTGAATTCCATTGAATAGCAAAAGGTCTTGTAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | TGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGAGATCAATTGGTTTTATACTGTaGGTAATGAGCCACACCATA | + |
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Preference number: 4 (lower is better) Translates to: WTQVILVILEKAPCLQRSIGFIL*VMSHTI Trigger: TATGGTGTGGCTCATTACTCACAGTATAAAACCAAT...TGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361271.8 ENST00000498812.5 |
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| CDS-3UTR TCA 90 bp | TATTACAAGACCTTTTGCTATTCAATGGAATTCAGAATGAAAGGAGTCTGTCCAAGTGGTCAAGAAGGCTaGATGTGTAGAAGGAATAGC | + |
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Preference number: 4 (lower is better) Translates to: YYKTFCYSMEFRMKGVCPSGQEG*MCRRNS Trigger: GCTATTCCTTCTACACATTCAGCCTTCTTGACCACT...TGGACAGACTCCTTTCATTCTGAATTCCATTGAATAGCAAAAGGTCTTGTAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | AAAACTTGGACTCAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTTGCAGTCTCAACCAAAGTTCTaGGTACAGCATGATCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KTWTQVILVILEKAPCLQSQPKF*VQHDHL Trigger: AAGATGATCATGCTGTACTCAGAACTTTGGTTGAGA...CTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCAAGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | TTTAGCAAATTATATCCACGCTTCCAAACACTGTTATTAGTCATAATGCTGCCTATTGGTTTTATACTGTaGGTAATGAGCCACACCATA | + |
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Preference number: 4 (lower is better) Translates to: FSKLYPRFQTLLLVIMLPIGFIL*VMSHTI Trigger: TATGGTGTGGCTCATTACTCACAGTATAAAACCAAT...AGGCAGCATTATGACTAATAACAGTGTTTGGAAGCGTGGATATAATTTGCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | AATGGAATTCAGAATGAAAGGAGTCTGTCCAAAGATCATACCCCAAAATGTTTACTACCCAAAAGTTACTaGTATTTGCACAGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: NGIQNERSLSKDHTPKCLLPKSY*YLHSSC Trigger: ACAAGAACTGTGCAAATATCAGTAACTTTTGGGTAG...TAAACATTTTGGGGTATGATCTTTGGACAGACTCCTTTCATTCTGAATTCCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR TCA 90 bp | TATTACAAGACCTTTTGCTATTCAATGGAATTCAGAATGAAAGGAGTCTGTCCAATGCTGCCTTATTCCTaGAAAAATAGATTGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: YYKTFCYSMEFRMKGVCPMLPYS*KNRLWV Trigger: AACCCACAATCTATTTTTTCAGGAATAAGGCAGCAT...TGGACAGACTCCTTTCATTCTGAATTCCATTGAATAGCAAAAGGTCTTGTAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| 3UTR CAA 72 bp | CAGGTAATCTTGGTTATTCTGGAAAAAGCACCTTGTTaGCAGAGATCATTTAATCATCCTTTTCTACAATCA | + |
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Preference number: 4 (lower is better) Translates to: QVILVILEKAPC*QRSFNHPFLQS Trigger: TGATTGTAGAAAAGGATGATTAAATGATCTCTGCAAACAAGGTGCTTTTTCCAGAATAACCAAGATTACCTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498812.5 |
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| CDS CCA 90 bp | CCGAGGCGCCGCCGTTGGTGCCGTCCTCGTCGCTGGACGCCATGGTaGCCGCGCACCTGGGGGACGTGGGAGACAGCGGCAGGAGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: PRRRRWCRPRRWTPW*PRTWGTWETAAGAW Trigger: CCACGCTCCTGCCGCTGTCTCCCACGTCCCCCAGGTGCGCGGCCACCATGGCGTCCAGCGACGAGGACGGCACCAACGGCGGCGCCTCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000326961.6 ENST00000361271.8 ENST00000632169.1 |
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| CDS GCA 90 bp | CTCAGCTCAATGCAACCTTTGCCTCTCGGGTTCAAGCGATTCTTCTaGCTCGGCCTCCTGAGTAGCTGGGATTCCAGGTGCTCGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LSSMQPLPLGFKRFF*LGLLSSWDSRCSPP Trigger: TGGGGGCGAGCACCTGGAATCCCAGCTACTCAGGAGGCCGAGGCAGAAGAATCGCTTGAACCCGAGAGGCAAAGGTTGCATTGAGCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000632169.1 |
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| CDS-3UTR CAA 90 bp | TATAGAGAAGACTTTCTCAACCAAAGTTCTGAGTACAGCATGATCATCTTCCTCTCCGAGGCGCCGCCGTaGGTGCCGTCCTCGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: YREDFLNQSSEYSMIIFLSEAPP*VPSSSL Trigger: CAGCGACGAGGACGGCACCAACGGCGGCGCCTCGGA...GAGGAAGATGATCATGCTGTACTCAGAACTTTGGTTGAGAAAGTCTTCTCTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS-3UTR CAA 90 bp | AACACGAATTTTAATTCTCTGGCGTTAGCACACAAAATAAGCATGCACAGGACATCCGAGGCGCCGCCGTaGGTGCCGTCCTCGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: NTNFNSLALAHKISMHRTSEAPP*VPSSSL Trigger: CAGCGACGAGGACGGCACCAACGGCGGCGCCTCGGA...TGTCCTGTGCATGCTTATTTTGTGTGCTAACGCCAGAGAATTAAAATTCGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CAA 90 bp | TATAGAGAAGACTTTCTCAACCAAAGTTCTGAGTACAGCATGATCATCTTCCTCTTGCCCAGACTGGCCTaGAACTTCTGGGCTCAAACG | + |
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Preference number: 5 (lower is better) Translates to: YREDFLNQSSEYSMIIFLLPRLA*NFWAQT Trigger: CGTTTGAGCCCAGAAGTTCAAGGCCAGTCTGGGCAA...GAGGAAGATGATCATGCTGTACTCAGAACTTTGGTTGAGAAAGTCTTCTCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS GCA 90 bp | GTTAGCACACAAAATAAGCATGCACAGGACAAGGAGAAACTAAACTaGAAGATATCGCCACCTGGCCCATTTAATGAAGTATGGCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: VSTQNKHAQDKEKLN*KISPPGPFNEVWQV Trigger: CACTTGCCATACTTCATTAAATGGGCCAGGTGGCGATATCTTGCAGTTTAGTTTCTCCTTGTCCTGTGCATGCTTATTTTGTGTGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS-3UTR CAA 90 bp | CATTCCTGTTTTCTTCACATGCGGCAAGGCAGCGTATATTGTAAGAAGTTCACCTGGACTCAGGTAATCTaGGTTATTCTGGAAAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: HSCFLHMRQGSVYCKKFTWTQVI*VILEKA Trigger: TGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA...GGTGAACTTCTTACAATATACGCTGCCTTGCCGCATGTGAAGAAAACAGGAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498812.5 |
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| CDS TCA 90 bp | GCTCAAGTAGACAACATGTTTGTGTCACTTACTGGTTTTATACTGTaGGTAATGAGCCACACCATAAAGATTCTTGAACTCACTTGGACC | + |
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Preference number: 5 (lower is better) Translates to: AQVDNMFVSLTGFIL*VMSHTIKILELTWT Trigger: GGTCCAAGTGAGTTCAAGAATCTTTATGGTGTGGCTCATTACTCACAGTATAAAACCAGTAAGTGACACAAACATGTTGTCTACTTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000632169.1 |
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| CDS-3UTR CAA 90 bp | TATAGAGAAGACTTTCTCAACCAAAGTTCTGAGTACAGCATGATCATCTTCCTCTGGACTCAGGTAATCTaGGTTATTCTGGAAAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: YREDFLNQSSEYSMIIFLWTQVI*VILEKA Trigger: TGCTTTTTCCAGAATAACCAAGATTACCTGAGTCCA...GAGGAAGATGATCATGCTGTACTCAGAACTTTGGTTGAGAAAGTCTTCTCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000361271.8 |
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| CDS GCA 72 bp | CCCGGTCCTCGCCGGCCTCCGAGGCGCCGCCGTTGGTaGCGTCCTCGTCGCTGGACGCCATGGTGGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: PGPRRPPRRRRW*RPRRWTPWWPR Trigger: GCGCGGCCACCATGGCGTCCAGCGACGAGGACGGCACCAACGGCGGCGCCTCGGAGGCCGGCGAGGACCGGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000326961.6 ENST00000361271.8 ENST00000466335.1 ENST00000632169.1 |
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| CDS TCA 72 bp | TATACTGTGAGTAATGAGCCACACCATAAAGATTCTTaGACTCACTTGGACCCCAGTCACAATCACAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: YTVSNEPHHKDS*THLDPSHNHRS Trigger: ACTTCTGTGATTGTGACTGGGGTCCAAGTGAGTTCAAGAATCTTTATGGTGTGGCTCATTACTCACAGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000361271.8 ENST00000466335.1 ENST00000471481.1 ENST00000498812.5 ENST00000632169.1 |
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| CDS GCA 72 bp | CAAAATAAGCATGCACAGGACAAGGAGAAACTAAACTaGAAGATATCGCCACCTGGCCCATTTAATGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: QNKHAQDKEKLN*KISPPGPFNEV Trigger: TACTTCATTAAATGGGCCAGGTGGCGATATCTTGCAGTTTAGTTTCTCCTTGTCCTGTGCATGCTTATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466335.1 |
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| CDS CCA 72 bp | GTAATGAGCCACACCATAAAGATTCTTGAACTCACTTaGACCCCAGTCACAATCACAGAAGTAGGTACAATT | + |
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Preference number: 6 (lower is better) Translates to: VMSHTIKILELT*TPVTITEVGTI Trigger: AATTGTACCTACTTCTGTGATTGTGACTGGGGTCCAAGTGAGTTCAAGAATCTTTATGGTGTGGCTCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000361271.8 ENST00000466335.1 ENST00000471481.1 ENST00000498812.5 ENST00000632169.1 |
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| CDS CCA 72 bp | GCAGGCTCAAGTAGACAACATGTTTGTGTCACTTACTaGTTTTATACTGTGAGTAATGAGCCACACCATAAA | + |
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Preference number: 6 (lower is better) Translates to: AGSSRQHVCVTY*FYTVSNEPHHK Trigger: TTTATGGTGTGGCTCATTACTCACAGTATAAAACCAGTAAGTGACACAAACATGTTGTCTACTTGAGCCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000632169.1 |
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