RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HABP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000130956

Ensembl transcript IDs: ENST00000375249.5, ENST00000375251.7, ENST00000466976.1

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTGTGTGGCTCTGGGTCCAGCTCTGTTCAGGGTGGGACTCCAGGTaGATTACTGAACCTCTGAGGTGTACCCCCAACCCCAAACTTTCA +
Preference number: 1 (lower is better)
Translates to: RVWLWVQLCSGWDSR*ITEPLRCTPNPKLS
Trigger: TGAAAGTTTGGGGTTGGGGGTACACCTCAGAGGTTCAGTAATTCACCTGGAGTCCCACCCTGAACAGAGCTGGACCCAGAGCCACACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR GCA 90 bp TTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTaGCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGGATGCGGTAT +
Preference number: 1 (lower is better)
Translates to: LQLLLKPRAEAFVRS*RTLTLVLRKKRMRY
Trigger: ATACCGCATCCTTTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR GCA 90 bp TATGTGTTTCCTCTAACGCTAAAGGCACAGCCCCCGGGAATCTACTaGTTCCTAAGAGTCTCCATGGAGTCTATTTTACAACCTCCTTTC +
Preference number: 1 (lower is better)
Translates to: YVFPLTLKAQPPGIY*FLRVSMESILQPPF
Trigger: GAAAGGAGGTTGTAAAATAGACTCCATGGAGACTCTTAGGAAGCAGTAGATTCCCGGGGGCTGTGCCTTTAGCGTTAGAGGAAACACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAGTCTCCCCACAGGTGTaGAGTGCAGCTCCGCGGTGC +
Preference number: 2 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKVSPQV*SAAPRC
Trigger: GCACCGCGGAGCTGCACTGCACACCTGTGGGGAGAC...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGACCCACAGGTGTGCAGTaGAGCTCCGCGGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: HSHHSSSSWEMACSRASGPTGVQ*SSAVLG
Trigger: TCCCAGCACCGCGGAGCTGCACTGCACACCTGTGGG...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGAGTCTCCCCACAGGTGTaGAGTGCAGCTCCGCGGTGC +
Preference number: 2 (lower is better)
Translates to: HSHHSSSSWEMACSRASGVSPQV*SAAPRC
Trigger: GCACCGCGGAGCTGCACTGCACACCTGTGGGGAGAC...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CCA 90 bp GCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGCATCTTCTTGGGAAATaGCCTGCTCTCGAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: AEGRGLCTQLPNSDSSSAHLLGK*PALEPL
Trigger: CAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATG...CGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CCA 90 bp CCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGCAGAGTGGTGGCCAGTaGCTACACAATAGCGATTTT +
Preference number: 2 (lower is better)
Translates to: PRAEAFVRSCRTLTLVLRQSGGQ*LHNSDF
Trigger: AAAATCGCTATTGTGTAGCCACTGGCCACCACTCTG...CCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCCCACAGGTGTGCAGTaGAGCTCCGCGGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYPTGVQ*SSAVLG
Trigger: TCCCAGCACCGCGGAGCTGCACTGCACACCTGTGGG...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTTCTTGGGAAATGGCCTaGTCTCGAGCCTCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSSWEMA*SRASGE
Trigger: TTCTCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGA...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAACCTCCTTTCCCTCCATaGTTCCGCGGAGGAGTCTAT +
Preference number: 2 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKPPFPP*FRGGVY
Trigger: ATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGG...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp GCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGGATGCCTCCTTTCCCTCCATaGTTCCGCGGAGGAGTCTAT +
Preference number: 2 (lower is better)
Translates to: AFVRSCRTLTLVLRKKRMPPFPP*FRGGVY
Trigger: ATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGG...CATCCTTTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp GCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGAAACTCAGCTGTGACTaGTTTCCATTAACAGTTCCA +
Preference number: 2 (lower is better)
Translates to: AEGRGLCTQLPNSDSSSAKLSCD*FPLTVP
Trigger: TGGAACTGTTAATGGAAAGCAGTCACAGCTGAGTTT...CGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR TCA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAACCGAAAACTCAGCTGTaGCTGCTTTCCATTAACAGT +
Preference number: 2 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKPKTQL*LLSINS
Trigger: ACTGTTAATGGAAAGCAGTCACAGCTGAGTTTTCGG...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCCCCCCGGGAATCTACTaGTTCCTAAGAGTCTCCATG +
Preference number: 2 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGAPPGIY*FLRVSM
Trigger: CATGGAGACTCTTAGGAAGCAGTAGATTCCCGGGGG...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CCA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCCATCTTCTTGGGAAATaGCCTGCTCTCGAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGAHLLGK*PALEPL
Trigger: CAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATG...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR TCA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGATGCAACAAATTTACATaGCACGGGAAAAGCAACATC +
Preference number: 2 (lower is better)
Translates to: HSHHSSSSWEMACSRASGCNKFT*HGKSNI
Trigger: GATGTTGCTTTTCCCGTGTCATGTAAATTTGTTGCA...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCATTCTTCATCTTCTTaGGAAATGGCCTGCTCTCGA +
Preference number: 2 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYHSSSS*EMACSR
Trigger: TCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATG...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR GCA 90 bp TGGGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACATGCGGAAGAAAAGGATaGGGTATTTGCTTTTGCCAT +
Preference number: 2 (lower is better)
Translates to: WDQGSDSISSEHMNCVTTCGRKG*GICFCH
Trigger: ATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCA...TGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CCA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTCATTCTTCATCTTCTTaGGAAATGGCCTGCTCTCGA +
Preference number: 2 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFHSSSS*EMACSR
Trigger: TCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATG...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR TCA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTTGCAACAAATTTACATaGCACGGGAAAAGCAACATC +
Preference number: 2 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFCNKFT*HGKSNI
Trigger: GATGTTGCTTTTCCCGTGTCATGTAAATTTGTTGCA...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR CCA 72 bp TTCCTCCCCAGCACAGTGTGTGTTCCCGGGCGTGTGTaGCTCTGGGTCCAGCTCTGTTCAGGGTGGGACTCC +
Preference number: 3 (lower is better)
Translates to: FLPSTVCVPGRV*LWVQLCSGWDS
Trigger: GGAGTCCCACCCTGAACAGAGCTGGACCCAGAGCCACACACGCCCGGGAACACACACTGTGCTGGGGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR GCA 72 bp TTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTaGCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: LLKPRAEAFVRS*RTLTLVLRKKR
Trigger: CCTTTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CAA 90 bp GGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGGCGAGGGCAGAGGCCTTaGTACGCAGCTGCCGAACTC +
Preference number: 3 (lower is better)
Translates to: GPRFRFHLKRAYELCDNRRGQRP*YAAAEL
Trigger: GAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCG...CCTGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR TCA 72 bp CCAGCTCTGTTCAGGGTGGGACTCCAGGTGAATTACTaGACCTCTGAGGTGTACCCCCAACCCCAAACTTTC +
Preference number: 3 (lower is better)
Translates to: PALFRVGLQVNY*TSEVYPQPQTF
Trigger: GAAAGTTTGGGGTTGGGGGTACACCTCAGAGGTTCAGTAATTCACCTGGAGTCCCACCCTGAACAGAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CAA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCCCATTCTTCATCTTCTaGGGAAATGGCCTGCTCTCG +
Preference number: 3 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRPFFIF*GNGLLS
Trigger: CGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGG...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CAA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTCCATTCTTCATCTTCTaGGGAAATGGCCTGCTCTCG +
Preference number: 3 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFPFFIF*GNGLLS
Trigger: CGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGG...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR-3UTR CAA 90 bp TGGGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAAGTTATTTACAACTTTaGCTCAAGCCGAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: WDQGSDSISSEHMNCVTTSYLQL*LKPRAE
Trigger: CTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACT...TGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
3UTR TCA 72 bp TGTATTTTAATTTCTTGGTCTCCGAAAACTCAGCTGTaGCTGCTTTCCATTAACAGTTCCAGCTCTATGTGT +
Preference number: 3 (lower is better)
Translates to: CILISWSPKTQL*LLSINSSSSMC
Trigger: ACACATAGAGCTGGAACTGTTAATGGAAAGCAGTCACAGCTGAGTTTTCGGAGACCAAGAAATTAAAATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGCTAGGAGTCCGCTTCTaGCCCGGCGCCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PRAEAFVRSCRTLTLVLRLGVRF*PGACRP
Trigger: CGGCCTGCAGGCGCCGGGCCAGAAGCGGACTCCTAG...CCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGCGCCGGGAGGCTCTTaGGCTCCTTCTGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSAPGGS*APSATP
Trigger: GGGAGTCGCAGAAGGAGCGCAAGAGCCTCCCGGCGC...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTCCCACAGGTGTGCAGTaGAGCTCCGCGGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSPTGVQ*SSAVLG
Trigger: TCCCAGCACCGCGGAGCTGCACTGCACACCTGTGGG...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGACTAGGAGTCCGCTTCTaGCCCGGCGCCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HSHHSSSSWEMACSRASGLGVRF*PGACRP
Trigger: CGGCCTGCAGGCGCCGGGCCAGAAGCGGACTCCTAG...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGCCGGGTCATCTGGGTTaGGGGCAACATCTTGCATCA +
Preference number: 4 (lower is better)
Translates to: AEGRGLCTQLPNSDSSSAPGHLG*GQHLAS
Trigger: TGATGCAAGATGTTGCCCCCAACCCAGATGACCCGG...CGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAATCGTCGTCCAGCAGCTaGTGGAAGCGGTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKSSSSS*WKRLAT
Trigger: GGTGGCCAACCGCTTCCATCAGCTGCTGGACGACGA...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp GCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGCTCCAGGTGAATTACTaGACCTCTGAGGTGTACCCC +
Preference number: 4 (lower is better)
Translates to: AEGRGLCTQLPNSDSSSALQVNY*TSEVYP
Trigger: GGGGTACACCTCAGAGGTTCAGTAATTCACCTGGAG...CGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTCAGCCGAAACTCTCCTaGATCGCGGCGCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESQPKLS*IAAPAA
Trigger: TGCCGCTGGCGCCGCGATGCAGGAGAGTTTCGGCTG...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp TATGTGTTTCCTCTAACGCTAAAGGCACAGCCCCCGGGAATCTACTGCTTCCTAGCGCCGGGAGGCTCTTaGGCTCCTTCTGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: YVFPLTLKAQPPGIYCFLAPGGS*APSATP
Trigger: GGGAGTCGCAGAAGGAGCGCAAGAGCCTCCCGGCGC...TAGGAAGCAGTAGATTCCCGGGGGCTGTGCCTTTAGCGTTAGAGGAAACACATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCCAGAGCGCCCTTCATaGCGCCGCGACCACTGCGGG +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYPERPS*RRDHCG
Trigger: CCCGCAGTGGTCGCGGCGGCATGAAGGGCGCTCTGG...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp GGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGGCCTCGTCGCGCCTCTTaGGCTGCAGCTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRFRFHLKRAYELCDNRPRRAS*AAAAAG
Trigger: GCCAGCAGCAGCTGCAGCGCAAGAGGCGCGACGAGG...CCTGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTGTTCCCGGGCGTGTGTaGCTCTGGGTCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESVPGRV*LWVQLC
Trigger: ACAGAGCTGGACCCAGAGCCACACACGCCCGGGAAC...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTTCTTCCGGGGTGCCCTaGGACTCCTCCACCACTGTG +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESSSGVP*DSSTTV
Trigger: CACAGTGGTGGAGGAGTCCCAGGGCACCCCGGAAGA...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR GCA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCCCAGAGCGCCCTTCATaGCGCCGCGACCACTGCGGG +
Preference number: 4 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRPERPS*RRDHCG
Trigger: CCCGCAGTGGTCGCGGCGGCATGAAGGGCGCTCTGG...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCCCCGGGTGCCTCCTCTaGCTCCACGCCCAGGACGAG +
Preference number: 4 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRPGCLL*LHAQDE
Trigger: CTCGTCCTGGGCGTGGAGCCAGAGGAGGCACCCGGG...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CAGCTCTATGTGTTTCCTCTAACGCTAAAGGCACAGCCCCCGGGAATCTACTGCGCAGCTCCGCGGTGCTaGGAAACAGGGCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: QLYVFPLTLKAQPPGIYCAAPRC*ETGLFQ
Trigger: TTGAAAGAGCCCTGTTTCCCAGCACCGCGGAGCTGC...GCAGTAGATTCCCGGGGGCTGTGCCTTTAGCGTTAGAGGAAACACATAGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAATCTCCAGCTGGGATGTaGTGTCATTGGCGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKSPAGM*CHWRVS
Trigger: GGAAACCCGCCAATGACATCACATCCCAGCTGGAGA...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp GCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGCCGAAAACTCAGCTGTaGCTGCTTTCCATTAACAGT +
Preference number: 4 (lower is better)
Translates to: AEGRGLCTQLPNSDSSSAPKTQL*LLSINS
Trigger: ACTGTTAATGGAAAGCAGTCACAGCTGAGTTTTCGG...CGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGAATTACTGAACCTCTaGGGTGTACCCCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSELLNL*GVPPTP
Trigger: TGGGGTTGGGGGTACACCTCAGAGGTTCAGTAATTC...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp TGGGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACACAGCCGAAACTCTCCTaGATCGCGGCGCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: WDQGSDSISSEHMNCVTTQPKLS*IAAPAA
Trigger: TGCCGCTGGCGCCGCGATGCAGGAGAGTTTCGGCTG...TGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTGGGTCCATAGTTCTCTaGCCTCCTGATCCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESGSIVL*PPDPSP
Trigger: CGGGGAAGGATCAGGAGGGCAGAGAACTATGGACCC...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATGTCTCCCCACAGGTGTaGAGTGCAGCTCCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYVSPQV*SAAPRC
Trigger: GCACCGCGGAGCTGCACTGCACACCTGTGGGGAGAC...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp GGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGGACTCCTCTTCCGGGGTaGCCTGGGACTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GPRFRFHLKRAYELCDNRTPLPG*PGTPPP
Trigger: TGGTGGAGGAGTCCCAGGGCACCCCGGAAGAGGAGT...CCTGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR CCA 90 bp CTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCTCTATATACACATTTTCCCGGGTGCCTCCTCTaGCTCCACGCCCAGGACGAG +
Preference number: 4 (lower is better)
Translates to: LSLHASAEESILSLYTHFPGCLL*LHAQDE
Trigger: CTCGTCCTGGGCGTGGAGCCAGAGGAGGCACCCGGG...AAAATGTGTATATAGAGATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTACTCCTCCACCACTGTaGGTTCCTCCATCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESTPPPL*VPPSVQ
Trigger: CTGCACCGATGGAGGAACCCACAGTGGTGGAGGAGT...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR TCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATTCGTCGTCCAGCAGCTaGTGGAAGCGGTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYSSSSS*WKRLAT
Trigger: GGTGGCCAACCGCTTCCATCAGCTGCTGGACGACGA...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp GCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGGATGTCTCCAGCTGGGATGTaGTGTCATTGGCGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AFVRSCRTLTLVLRKKRMSPAGM*CHWRVS
Trigger: GGAAACCCGCCAATGACATCACATCCCAGCTGGAGA...CATCCTTTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp CAGCTCTATGTGTTTCCTCTAACGCTAAAGGCACAGCCCCCGGGAATCTACTGCGAATTACTGAACCTCTaGGGTGTACCCCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: QLYVFPLTLKAQPPGIYCELLNL*GVPPTP
Trigger: TGGGGTTGGGGGTACACCTCAGAGGTTCAGTAATTC...GCAGTAGATTCCCGGGGGCTGTGCCTTTAGCGTTAGAGGAAACACATAGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTCTGTCATTCCATCCTTaGTGCTCCCCTCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSLSFHP*CSPLLG
Trigger: TCCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAG...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGACCTCCTTTCCCTCCATaGTTCCGCGGAGGAGTCTAT +
Preference number: 4 (lower is better)
Translates to: HSHHSSSSWEMACSRASGPPFPP*FRGGVY
Trigger: ATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGG...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGCCTTTGTACGCAGCTaGCGAACTCTGACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSAFVRS*RTLTLV
Trigger: AACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGC...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp TCAAGCGAGCATATGAACTGTGTGACAACAGGCAGACAGTACCTCTGTGTCTATGGGCGTGTGTGGCTCTaGGTCCAGCTCTGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSEHMNCVTTGRQYLCVYGRVWL*VQLCSG
Trigger: CCCTGAACAGAGCTGGACCCAGAGCCACACACGCCC...ATAGACACAGAGGTACTGTCTGCCTGTTGTCACACAGTTCATATGCTCGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATGTTCCCGGGCGTGTGTaGCTCTGGGTCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYVPGRV*LWVQLC
Trigger: ACAGAGCTGGACCCAGAGCCACACACGCCCGGGAAC...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp GCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGGATGGAAACTTCTCAGCTGTaGAGTCTGCCTGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AFVRSCRTLTLVLRKKRMETSQL*SLPASL
Trigger: CAGAGAGGCAGGCAGACTTCACAGCTGAGAAGTTTC...CATCCTTTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTGTACCTCTGTGTCTATaGGAAAGCGGGGAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESVPLCL*ESGESN
Trigger: GTTGCTCTCCCCGCTTTCTCATAGACACAGAGGTAC...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp CCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGTGTTGTCTTCAGTTCTaGCTGCTATTTTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: PRAEAFVRSCRTLTLVLRCCLQF*LLFCHS
Trigger: GGAATGACAAAATAGCAGTCAGAACTGAAGACAACA...CCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR GCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTCCCCCGGGAATCTACTaGTTCCTAAGAGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESPPGIY*FLRVSM
Trigger: CATGGAGACTCTTAGGAAGCAGTAGATTCCCGGGGG...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCGCTGATGGAAGCGGTTaGCCACCACGCAGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGAADGSG*PPRSRN
Trigger: GTTTCGGCTGCGTGGTGGCCAACCGCTTCCATCAGC...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp TGGGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGCTGATGGAAGCGGTTaGCCACCACGCAGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: WDQGSDSISSEHMNCVTTADGSG*PPRSRN
Trigger: GTTTCGGCTGCGTGGTGGCCAACCGCTTCCATCAGC...TGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGGATGCATCTTCTTGGGAAATaGCCTGCTCTCGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AFVRSCRTLTLVLRKKRMHLLGK*PALEPL
Trigger: CAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATG...CATCCTTTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGGATGCCAACTCAGGAACTTTaGCTGGAGACTCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: AFVRSCRTLTLVLRKKRMPTQEL*LETPLP
Trigger: CGGAAGAGGAGTCTCCAGCCAAAGTTCCTGAGTTGG...CATCCTTTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR GCA 90 bp TCAAGCGAGCATATGAACTGTGTGACAACAGGCAGACAGTACCTCTGTGTCTATGGGTCCATAGTTCTCTaGCCTCCTGATCCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: SSEHMNCVTTGRQYLCVYGSIVL*PPDPSP
Trigger: CGGGGAAGGATCAGGAGGGCAGAGAACTATGGACCC...ATAGACACAGAGGTACTGTCTGCCTGTTGTCACACAGTTCATATGCTCGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CAGCTCTATGTGTTTCCTCTAACGCTAAAGGCACAGCCCCCGGGAATCTACTGCTTGCATCACCACTTCTaGTCTGGGTCCATAGTTCTC +
Preference number: 4 (lower is better)
Translates to: QLYVFPLTLKAQPPGIYCLHHHF*SGSIVL
Trigger: GAGAACTATGGACCCAGAGCAGAAGTGGTGATGCAA...GCAGTAGATTCCCGGGGGCTGTGCCTTTAGCGTTAGAGGAAACACATAGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGTTATTTACAACTTTTaGTCAAGCCGAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSVIYNF*SSRGQR
Trigger: CCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAAC...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CAGCTCTATGTGTTTCCTCTAACGCTAAAGGCACAGCCCCCGGGAATCTACTGCGAATCACCACGGCTTTaGAAGGAACAGTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: QLYVFPLTLKAQPPGIYCESPRL*KEQWIL
Trigger: CAGAATCCACTGTTCCTTCCAAAGCCGTGGTGATTC...GCAGTAGATTCCCGGGGGCTGTGCCTTTAGCGTTAGAGGAAACACATAGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGGATGTTGGCTCCACATCACTaGTATCTTTACCCGATCCCC +
Preference number: 4 (lower is better)
Translates to: AFVRSCRTLTLVLRKKRMLAPHH*YLYPIP
Trigger: GGGGATCGGGTAAAGATACCAGTGATGTGGAGCCAA...CATCCTTTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR TCA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCGGGTGGGACTCCAGGTaGATTACTGAACCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGAGWDSR*ITEPLR
Trigger: CCTCAGAGGTTCAGTAATTCACCTGGAGTCCCACCC...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGTGCAGCTCCGCGGTaGTGGGAAACAGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRSAAPR*WETGLF
Trigger: AAAGAGCCCTGTTTCCCAGCACCGCGGAGCTGCACT...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAGTTATTTACAACTTTTaGTCAAGCCGAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKVIYNF*SSRGQR
Trigger: CCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAAC...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATGGGTTCCTCCATCGGTaGAGTTGGCTCCACATCACT +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYGFLHR*SWLHIT
Trigger: AGTGATGTGGAGCCAACTGCACCGATGGAGGAACCC...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR CCA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGTTAAACTCAGGCTTTaGTCTGGTCTGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSVKLRL*SGLFLK
Trigger: CTTCAAGAACAGACCAGACCAAAGCCTGAGTTTAAC...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGAGAATCACCACGGCTTTaGAAGGAACAGTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: HSHHSSSSWEMACSRASGESPRL*KEQWIL
Trigger: CAGAATCCACTGTTCCTTCCAAAGCCGTGGTGATTC...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCCGGGTCATCTGGGTTaGGGGCAACATCTTGCATCA +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYPGHLG*GQHLAS
Trigger: TGATGCAAGATGTTGCCCCCAACCCAGATGACCCGG...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGGCATCTTCTTGGGAAATaGCCTGCTCTCGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPRFRFHLKRAYELCDNRHLLGK*PALEPL
Trigger: CAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATG...CCTGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp TCAAGCGAGCATATGAACTGTGTGACAACAGGCAGACAGTACCTCTGTGTCTATGAAACTTCTCAGCTGTaGAGTCTGCCTGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSEHMNCVTTGRQYLCVYETSQL*SLPASL
Trigger: CAGAGAGGCAGGCAGACTTCACAGCTGAGAAGTTTC...ATAGACACAGAGGTACTGTCTGCCTGTTGTCACACAGTTCATATGCTCGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp AAAAACACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTGTACCTCTGTGTCTATaGGAAAGCGGGGAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: KNTVTILHLLGKWPALEPVPLCL*ESGESN
Trigger: GTTGCTCTCCCCGCTTTCTCATAGACACAGAGGTAC...AGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTAGTGCAGCTCCGCGGTaGTGGGAAACAGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFSAAPR*WETGLF
Trigger: AAAGAGCCCTGTTTCCCAGCACCGCGGAGCTGCACT...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp TGGGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACATCTTGGGAAATGGCCTaGTCTCGAGCCTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: WDQGSDSISSEHMNCVTTSWEMA*SRASGE
Trigger: TTCTCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGA...TGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTCATTCTTCATCTTCTTaGGAAATGGCCTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESHSSSS*EMACSR
Trigger: TCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATG...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTAAAAAGCACAGATCCTaGGACCAAGGTTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESKKHRS*DQGSDS
Trigger: GGAATCTGAACCTTGGTCCCAGGATCTGTGCTTTTT...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAATCTCGCTTTCCTCTCTaGTCAAAAGCGTCAAAAACT +
Preference number: 4 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKSRFPL*SKASKT
Trigger: AGTTTTTGACGCTTTTGACCAGAGAGGAAAGCGAGA...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR CCA 90 bp AAAAACACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTCCATCGGTGCAGTTaGCTCCACATCACTGGTATC +
Preference number: 4 (lower is better)
Translates to: KNTVTILHLLGKWPALEPLHRCS*LHITGI
Trigger: GATACCAGTGATGTGGAGCCAACTGCACCGATGGAG...AGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR GCA 90 bp AAAAACACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGTCATTCCATCCTTaGTGCTCCCCTCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: KNTVTILHLLGKWPALEPLSFHP*CSPLLG
Trigger: TCCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAG...AGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTCCTCCTTTCCCTCCATaGTTCCGCGGAGGAGTCTAT +
Preference number: 4 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFPPFPP*FRGGVY
Trigger: ATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGG...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCCCCCCGGGAATCTACTaGTTCCTAAGAGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRPPGIY*FLRVSM
Trigger: CATGGAGACTCTTAGGAAGCAGTAGATTCCCGGGGG...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCGCCTTTGTACGCAGCTaGCGAACTCTGACTCTAGTT +
Preference number: 4 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGAAFVRS*RTLTLV
Trigger: AACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGC...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTGTCTTCAGTTCTGACTaGTATTTTGTCATTCCCACC +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESVFSSD*YFVIPT
Trigger: GGTGGGAATGACAAAATAGCAGTCAGAACTGAAGAC...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR CCA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTAAATTAATCTCCAGCTaGGATGTGATGTCATTGGCG +
Preference number: 4 (lower is better)
Translates to: PWSLFYNLLSLHASAEESKLISS*DVMSLA
Trigger: CGCCAATGACATCACATCCCAGCTGGAGATTAATTT...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGGCAGAGTGGTGGCCAGTaGCTACACAATAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: GPRFRFHLKRAYELCDNRQSGGQ*LHNSDF
Trigger: AAAATCGCTATTGTGTAGCCACTGGCCACCACTCTG...CCTGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp TATGTGTTTCCTCTAACGCTAAAGGCACAGCCCCCGGGAATCTACTGCTTCCTACTGTATTTTGACTTGTaGATCACCACGGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: YVFPLTLKAQPPGIYCFLLYFDL*ITTALE
Trigger: TTCCAAAGCCGTGGTGATTCACAAGTCAAAATACAG...TAGGAAGCAGTAGATTCCCGGGGGCTGTGCCTTTAGCGTTAGAGGAAACACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCTTGCATCACCACTTCTaGTCTGGGTCCATAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGALHHHF*SGSIVL
Trigger: GAGAACTATGGACCCAGAGCAGAAGTGGTGATGCAA...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTTCTTGGGAAATGGCCTaGTCTCGAGCCTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFSWEMA*SRASGE
Trigger: TTCTCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGA...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCTCTATATACACATTTTTCACCACTTCTGCTCTaGGTCCATAGTTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSLHASAEESILSLYTHFSPLLL*VHSSLP
Trigger: GGGCAGAGAACTATGGACCCAGAGCAGAAGTGGTGA...AAAATGTGTATATAGAGATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp AAAAACACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCCGAAAACTCAGCTGTaGCTGCTTTCCATTAACAGT +
Preference number: 4 (lower is better)
Translates to: KNTVTILHLLGKWPALEPPKTQL*LLSINS
Trigger: ACTGTTAATGGAAAGCAGTCACAGCTGAGTTTTCGG...AGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp GGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGGTGCGGAAGAAAAGGATaGGGTATTTGCTTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GPRFRFHLKRAYELCDNRCGRKG*GICFCH
Trigger: ATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCA...CCTGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGAAGGAACTTTTTCATCTaGAAACTTCTCAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: HSHHSSSSWEMACSRASGRNFFI*KLLSCE
Trigger: TTCACAGCTGAGAAGTTTCCAGATGAAAAAGTTCCT...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375251.7
CDS-3UTR CCA 90 bp GGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGGAGGAACAGTGGATTCTaGTTTCCGGATGTTAAACTC +
Preference number: 4 (lower is better)
Translates to: GPRFRFHLKRAYELCDNRRNSGF*FPDVKL
Trigger: GAGTTTAACATCCGGAAACCAGAATCCACTGTTCCT...CCTGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp TGGGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACACATTCTTCATCTTCTTaGGAAATGGCCTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: WDQGSDSISSEHMNCVTTHSSSS*EMACSR
Trigger: TCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATG...TGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATGGAGCCAGGACTAAGTaGGAAAAACTGCTTATAAGT +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYGARTK*EKLLIS
Trigger: ACTTATAAGCAGTTTTTCTCACTTAGTCCTGGCTCC...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCTGCGGAAGAAAAGGATaGGGTATTTGCTTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGACGRKG*GICFCH
Trigger: ATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCA...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATGTTAAACTCAGGCTTTaGTCTGGTCTGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYVKLRL*SGLFLK
Trigger: CTTCAAGAACAGACCAGACCAAAGCCTGAGTTTAAC...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp GTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATAGGAACAGTGGATTCTaGTTTCCGGATGTTAAACTC +
Preference number: 4 (lower is better)
Translates to: VYFTTSFPSMLPRRSLYYRNSGF*FPDVKL
Trigger: GAGTTTAACATCCGGAAACCAGAATCCACTGTTCCT...ATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCTCTATATACACATTTTCAGAGTGGTGGCCAGTaGCTACACAATAGCGATTTT +
Preference number: 4 (lower is better)
Translates to: LSLHASAEESILSLYTHFQSGGQ*LHNSDF
Trigger: AAAATCGCTATTGTGTAGCCACTGGCCACCACTCTG...AAAATGTGTATATAGAGATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGAATCAAACCTATCACCTaGTTTTTCATCTGGAAACTT +
Preference number: 4 (lower is better)
Translates to: HSHHSSSSWEMACSRASGIKPIT*FFIWKL
Trigger: AAGTTTCCAGATGAAAAACCAGGTGATAGGTTTGAT...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR TCA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCGGTCTGGTCTGTTCTTaGAGATTTTTCCACTCATCT +
Preference number: 4 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRGLVCS*RFFHSS
Trigger: AGATGAGTGGAAAAATCTTCAAGAACAGACCAGACC...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCATCATCTCTGTATTTTaGCTTGTGAATCACCACGGC +
Preference number: 4 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRIISVF*LVNHHG
Trigger: GCCGTGGTGATTCACAAGTCAAAATACAGAGATGAT...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCTGCAACAAATTTACATaGCACGGGAAAAGCAACATC +
Preference number: 4 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGACNKFT*HGKSNI
Trigger: GATGTTGCTTTTCCCGTGTCATGTAAATTTGTTGCA...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCGGAGCCAGGACTAAGTaGGAAAAACTGCTTATAAGT +
Preference number: 4 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRGARTK*EKLLIS
Trigger: ACTTATAAGCAGTTTTTCTCACTTAGTCCTGGCTCC...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp TGGGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAAAACTCAGCTGTGACTaGTTTCCATTAACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: WDQGSDSISSEHMNCVTTKLSCD*FPLTVP
Trigger: TGGAACTGTTAATGGAAAGCAGTCACAGCTGAGTTT...TGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTAAAAAGCACAGATCCTaGGACCAAGGTTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFKKHRS*DQGSDS
Trigger: GGAATCTGAACCTTGGTCCCAGGATCTGTGCTTTTT...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTATCATCTCTGTATTTTaGCTTGTGAATCACCACGGC +
Preference number: 4 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFIISVF*LVNHHG
Trigger: GCCGTGGTGATTCACAAGTCAAAATACAGAGATGAT...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CCA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTAAATTAATCTCCAGCTaGGATGTGATGTCATTGGCG +
Preference number: 4 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFKLISS*DVMSLA
Trigger: CGCCAATGACATCACATCCCAGCTGGAGATTAATTT...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR TCA 90 bp CTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCTCTATATACACATTTTTGCAACAAATTTACATaGCACGGGAAAAGCAACATC +
Preference number: 4 (lower is better)
Translates to: LSLHASAEESILSLYTHFCNKFT*HGKSNI
Trigger: GATGTTGCTTTTCCCGTGTCATGTAAATTTGTTGCA...AAAATGTGTATATAGAGATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR GCA 90 bp CTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCTCTATATACACATTTTAAACTCAGCTGTGACTaGTTTCCATTAACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSLHASAEESILSLYTHFKLSCD*FPLTVP
Trigger: TGGAACTGTTAATGGAAAGCAGTCACAGCTGAGTTT...AAAATGTGTATATAGAGATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 90 bp CCCCGGGGCTATCGGGCCGCTGAGCGACGGGCGCCGGGAGGCTCTTaGGCTCCTTCTGCGACTCCCTCCGGCCGCCCGCGCCGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PRGYRAAERRAPGGS*APSATPSGRPRRLC
Trigger: ACAGAGCCGGCGCGGGCGGCCGGAGGGAGTCGCAGAAGGAGCGCAAGAGCCTCCCGGCGCCCGTCGCTCAGCGGCCCGATAGCCCCGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS TCA 90 bp TTCTGGCCCGGCGCCTGCAGGCCGCCCCCGGGGCTATCGGGCCGCTaGGCGACGGGCGCCGGGAGGCTCTTGCGCTCCTTCTGCGACTCC +
Preference number: 5 (lower is better)
Translates to: FWPGACRPPPGLSGR*ATGAGRLLRSFCDS
Trigger: GGAGTCGCAGAAGGAGCGCAAGAGCCTCCCGGCGCCCGTCGCTCAGCGGCCCGATAGCCCCGGGGGCGGCCTGCAGGCGCCGGGCCAGAA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 90 bp CAGCCACGGGACTCCCCAGAGCGCCCTTCATGCCGCCGCGACCACTaGGGGCCCGGGAGGGCAGCCCACGCGAGCGCGTCTCAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: QPRDSPERPSCRRDH*GPGRAAHASASQRS
Trigger: GCTTCGCTGAGACGCGCTCGCGTGGGCTGCCCTCCCGGGCCCGCAGTGGTCGCGGCGGCATGAAGGGCGCTCTGGGGAGTCCCGTGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 90 bp CTTTCGAGCATCCCCTCCGGCCCACGGCTGTCATTCCATCCTTGCTaGTCCCCTCTTCTAGGAGTCCGCTTCTGGCCCGGCGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSSIPSGPRLSFHPC*SPLLGVRFWPGACR
Trigger: CCTGCAGGCGCCGGGCCAGAAGCGGACTCCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAGCCGTGGGCCGGAGGGGATGCTCGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 90 bp GCTCTTTCGAGCATCCCCTCCGGCCCACGGCTGTCATTCCATCCTTaGTGCTCCCCTCTTCTAGGAGTCCGCTTCTGGCCCGGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: ALSSIPSGPRLSFHP*CSPLLGVRFWPGAC
Trigger: GCAGGCGCCGGGCCAGAAGCGGACTCCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAGCCGTGGGCCGGAGGGGATGCTCGAAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 90 bp GGCAACATCTTGCATCACCACTTCTGCTCTGGGTCCATAGTTCTCTaGCCTCCTGATCCTTCCCCGGCCTCCCCGGGTGCCTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GNILHHHFCSGSIVL*PPDPSPASPGASSG
Trigger: GCCAGAGGAGGCACCCGGGGAGGCCGGGGAAGGATCAGGAGGGCAGAGAACTATGGACCCAGAGCAGAAGTGGTGATGCAAGATGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS GCA 90 bp CTACCTCCAACTCAGGAACTTTGGCTGGAGACTCCTCTTCCGGGGTaGCCTGGGACTCCTCCACCACTGTGGGTTCCTCCATCGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LPPTQELWLETPLPG*PGTPPPLWVPPSVQ
Trigger: CTGCACCGATGGAGGAACCCACAGTGGTGGAGGAGTCCCAGGGCACCCCGGAAGAGGAGTCTCCAGCCAAAGTTCCTGAGTTGGAGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS CCA 90 bp TCCAACTCAGGAACTTTGGCTGGAGACTCCTCTTCCGGGGTGCCCTaGGACTCCTCCACCACTGTGGGTTCCTCCATCGGTGCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: SNSGTLAGDSSSGVP*DSSTTVGSSIGAVG
Trigger: GCCAACTGCACCGATGGAGGAACCCACAGTGGTGGAGGAGTCCCAGGGCACCCCGGAAGAGGAGTCTCCAGCCAAAGTTCCTGAGTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS GCA 90 bp GAGTCTGACTCCCTTGGCCCAGCTGGAAAAGTCTCCCCACAGGTGTaGAGTGCAGCTCCGCGGTGCTGGGAAACAGGGCTCTTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: ESDSLGPAGKVSPQV*SAAPRCWETGLFQD
Trigger: GTCTTGAAAGAGCCCTGTTTCCCAGCACCGCGGAGCTGCACTGCACACCTGTGGGGAGACTTTTCCAGCTGGGCCAAGGGAGTCAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS CCA 90 bp GCTGGAAAAGTCTCCCCACAGGTGTGCAGTGCAGCTCCGCGGTGCTaGGAAACAGGGCTCTTTCAAGACAGCGCAGGGAAATCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: AGKVSPQVCSAAPRC*ETGLFQDSAGKSSG
Trigger: CCCGGAAGATTTCCCTGCGCTGTCTTGAAAGAGCCCTGTTTCCCAGCACCGCGGAGCTGCACTGCACACCTGTGGGGAGACTTTTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS CCA 90 bp CTGGAGACTCCTCTTCCGGGGTGCCCTGGGACTCCTCCACCACTGTaGGTTCCTCCATCGGTGCAGTTGGCTCCACATCACTGGTATCTT +
Preference number: 5 (lower is better)
Translates to: LETPLPGCPGTPPPL*VPPSVQLAPHHWYL
Trigger: AAGATACCAGTGATGTGGAGCCAACTGCACCGATGGAGGAACCCACAGTGGTGGAGGAGTCCCAGGGCACCCCGGAAGAGGAGTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR CAA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTGGCGCCGGGAGGCTCTaGCGCTCCTTCTGCGACTCC +
Preference number: 5 (lower is better)
Translates to: PWSLFYNLLSLHASAEESGAGRL*RSFCDS
Trigger: GGAGTCGCAGAAGGAGCGCAAGAGCCTCCCGGCGCC...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp GCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGCCTCCATCGGTGCAGTaGGCTCCACATCACTGGTAT +
Preference number: 5 (lower is better)
Translates to: AEGRGLCTQLPNSDSSSAPPSVQ*APHHWY
Trigger: ATACCAGTGATGTGGAGCCAACTGCACCGATGGAGG...CGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR CAA 90 bp CCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGGAGTCTCGAGGGCAGAGGCCTTaGTACGCAGCTGCCGAACTC +
Preference number: 5 (lower is better)
Translates to: PWSLFYNLLSLHASAEESRGQRP*YAAAEL
Trigger: GAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCG...AGACTCCTCCGCGGAAGCATGGAGGGAAAGGAGGTTGTAAAATAGACTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp TTCTGCGGAAGAAAAGGATGCGGTATTTGCTTTTGCCATGATCCCTTTCCATTTGGCGCCGGGAGGCTCTaGCGCTCCTTCTGCGACTCC +
Preference number: 5 (lower is better)
Translates to: FCGRKGCGICFCHDPFPFGAGRL*RSFCDS
Trigger: GGAGTCGCAGAAGGAGCGCAAGAGCCTCCCGGCGCC...AAATGGAAAGGGATCATGGCAAAAGCAAATACCGCATCCTTTTCTTCCGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp ACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGTTGGGGGCAACATCTaGCATCACCACTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TTFAQAEGRGLCTQLPNSVGGNI*HHHFCS
Trigger: AGAGCAGAAGTGGTGATGCAAGATGTTGCCCCCAAC...AGAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp AAAAACACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCGAGGGCAGAGGCCTTaGTACGCAGCTGCCGAACTC +
Preference number: 5 (lower is better)
Translates to: KNTVTILHLLGKWPALEPRGQRP*YAAAEL
Trigger: GAGTTCGGCAGCTGCGTACAAAGGCCTCTGCCCTCG...AGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp CACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTCTGGAGTTGGGGGCAACATCTaGCATCACCACTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HSHHSSSSWEMACSRASGVGGNI*HHHFCS
Trigger: AGAGCAGAAGTGGTGATGCAAGATGTTGCCCCCAAC...TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp GGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGGTCCGGGTCATCTGGGTaGGGGGCAACATCTTGCATC +
Preference number: 5 (lower is better)
Translates to: GPRFRFHLKRAYELCDNRSGSSG*GATSCI
Trigger: GATGCAAGATGTTGCCCCCAACCCAGATGACCCGGA...CCTGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS CCA 90 bp ACACCCAGTGGGATGGTTAGAACCAAAACGACATTTGACAAGCGTTaGGGAGGATGTGGAGAAACTGGAACCCACATACACTGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: TPSGMVRTKTTFDKR*GGCGETGTHIHCQW
Trigger: CCACTGGCAGTGTATGTGGGTTCCAGTTTCTCCACATCCTCCCCAACGCTTGTCAAATGTCGTTTTGGTTCTAACCATCCCACTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS-3UTR CAA 90 bp TATGTGTTTCCTCTAACGCTAAAGGCACAGCCCCCGGGAATCTACTGCTTCCTATCCAACTCAGGAACTTaGGCTGGAGACTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: YVFPLTLKAQPPGIYCFLSNSGT*AGDSSS
Trigger: GGAAGAGGAGTCTCCAGCCAAAGTTCCTGAGTTGGA...TAGGAAGCAGTAGATTCCCGGGGGCTGTGCCTTTAGCGTTAGAGGAAACACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS TCA 90 bp AGGATGTGGAGAAACTGGAACCCACATACACTGCCAGTGGGAATGTaGAATGGTGTAGCCTCTTTGGAAAGCAGTCTGGCGGTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: RMWRNWNPHTLPVGM*NGVASLESSLAVPQ
Trigger: TTGAGGAACCGCCAGACTGCTTTCCAAAGAGGCTACACCATTTCACATTCCCACTGGCAGTGTATGTGGGTTCCAGTTTCTCCACATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS-3UTR CAA 90 bp AAAAACACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTGCTGTCATTCCATCCTaGCTGCTCCCCTCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: KNTVTILHLLGKWPALEPAVIPS*LLPSSR
Trigger: CCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAGC...AGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp TGGGACCAAGGTTCAGATTCCATCTCAAGCGAGCATATGAACTGTGTGACAACAGCTGTCATTCCATCCTaGCTGCTCCCCTCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: WDQGSDSISSEHMNCVTTAVIPS*LLPSSR
Trigger: CCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAGC...TGTTGTCACACAGTTCATATGCTCGCTTGAGATGGAATCTGAACCTTGGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCTCCGGGTCATCTGGGTaGGGGGCAACATCTTGCATC +
Preference number: 5 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRSGSSG*GATSCI
Trigger: GATGCAAGATGTTGCCCCCAACCCAGATGACCCGGA...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAAAGTTATTTACAACTTTaGCTCAAGCCGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKSYLQL*LKPRAE
Trigger: CTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACT...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 90 bp CCTATCACCTGGTTTTTCATCTGGAAACTTCTCAGCTGTGAAGTCTaGCTGCCTCTCTGTCTCATAGGGTCGGTATTCCCTGTAGGATCT +
Preference number: 5 (lower is better)
Translates to: PITWFFIWKLLSCEV*LPLCLIGSVFPVGS
Trigger: AGATCCTACAGGGAATACCGACCCTATGAGACAGAGAGGCAGGCAGACTTCACAGCTGAGAAGTTTCCAGATGAAAAACCAGGTGATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS GCA 90 bp CAACTCAGGAACTTTTTCATCTGGAAACTTCTCAGCTGTGAAGTCTaGCTGCCTCTCTGTCTCATAGGGTCGGTATTCCCTGTAGGATCT +
Preference number: 5 (lower is better)
Translates to: QLRNFFIWKLLSCEV*LPLCLIGSVFPVGS
Trigger: AGATCCTACAGGGAATACCGACCCTATGAGACAGAGAGGCAGGCAGACTTCACAGCTGAGAAGTTTCCAGATGAAAAAGTTCCTGAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375251.7
CDS CCA 90 bp GTATCTAGAATACATAAAGAATTCTTTATGAACAGCCAAGCGTGGTaGCTCATGCCGATAGTCCTAGCTACTCAGGGGGCTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: VSRIHKEFFMNSQAW*LMPIVLATQGAEVG
Trigger: TCCCACCTCAGCCCCCTGAGTAGCTAGGACTATCGGCATGAGCCACCACGCTTGGCTGTTCATAAAGAATTCTTTATGTATTCTAGATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS-3UTR CAA 90 bp GCAGAGGCCTTTGTACGCAGCTGCCGAACTCTGACTCTAGTTCTGCGGAAGAAATATCATCTCTGTATTTaGACTTGTGAATCACCACGG +
Preference number: 5 (lower is better)
Translates to: AEAFVRSCRTLTLVLRKKYHLCI*TCESPR
Trigger: CCGTGGTGATTCACAAGTCAAAATACAGAGATGATA...TTTCTTCCGCAGAACTAGAGTCAGAGTTCGGCAGCTGCGTACAAAGGCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp TCAAGCGAGCATATGAACTGTGTGACAACAGGCAGACAGTACCTCTGTGTCTATTGGGATGTGATGTCATaGGCGGGTTTCCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: SSEHMNCVTTGRQYLCVYWDVMS*AGFRKT
Trigger: TGTTTTCCGGAAACCCGCCAATGACATCACATCCCA...ATAGACACAGAGGTACTGTCTGCCTGTTGTCACACAGTTCATATGCTCGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp CCCAACCCCAAACTTTCACCAAAAGCAATAAAGAGGAACTCTAGAACTGGAGCCCCATTCTTCATCTTCTaGGGAAATGGCCTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: PNPKLSPKAIKRNSRTGAPFFIF*GNGLLS
Trigger: CGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGG...GGCTCCAGTTCTAGAGTTCCTCTTTATTGCTTTTGGTGAAAGTTTGGGGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp CTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCTCTATATACACATTTTTGGGATGTGATGTCATaGGCGGGTTTCCGGAAAACA +
Preference number: 5 (lower is better)
Translates to: LSLHASAEESILSLYTHFWDVMS*AGFRKT
Trigger: TGTTTTCCGGAAACCCGCCAATGACATCACATCCCA...AAAATGTGTATATAGAGATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp AAAAACACAGTCACCATTCTTCATCTTCTTGGGAAATGGCCTGCTCTCGAGCCTAGTTATTTACAACTTTaGCTCAAGCCGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KNTVTILHLLGKWPALEPSYLQL*LKPRAE
Trigger: CTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACT...AGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGACTGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS-3UTR CAA 90 bp CTTTCCCTCCATGCTTCCGCGGAGGAGTCTATACTATCTCTATATACACATTTTCCACATCCACCCATGTaGTCTTCAGTTCTGACTGCT +
Preference number: 5 (lower is better)
Translates to: LSLHASAEESILSLYTHFPHPPM*SSVLTA
Trigger: AGCAGTCAGAACTGAAGACAACATGGGTGGATGTGG...AAAATGTGTATATAGAGATAGTATAGACTCCTCCGCGGAAGCATGGAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS-3UTR CAA 90 bp AATACTAGTTATTTACAACTTTTGCTCAAGCCGAGGGCAGAGGCCTTTGTACGCGTTCTGACTGCTATTTaGTCATTCCCACCATATCTT +
Preference number: 5 (lower is better)
Translates to: NTSYLQLLLKPRAEAFVRVLTAI*SFPPYL
Trigger: AAGATATGGTGGGAATGACAAAATAGCAGTCAGAAC...GCGTACAAAGGCCTCTGCCCTCGGCTTGAGCAAAAGTTGTAAATAACTAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS CCA 90 bp AACAGAAGATACTTCCTATCTGTGTTCAAATCAATCTTTGAAAAATaGGAACATCACCATCCTGATGACATTAACATCACACTTCACCAC +
Preference number: 5 (lower is better)
Translates to: NRRYFLSVFKSIFEK*EHHHPDDINITLHH
Trigger: GTGGTGAAGTGTGATGTTAATGTCATCAGGATGGTGATGTTCCCATTTTTCAAAGATTGATTTGAACACAGATAGGAAGTATCTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS TCA 72 bp GGCGCCTGCAGGCCGCCCCCGGGGCTATCGGGCCGCTaGGCGACGGGCGCCGGGAGGCTCTTGCGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GACRPPPGLSGR*ATGAGRLLRSF
Trigger: GAAGGAGCGCAAGAGCCTCCCGGCGCCCGTCGCTCAGCGGCCCGATAGCCCCGGGGGCGGCCTGCAGGCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 72 bp GCCGCCGCCTCGTCGCGCCTCTTGCGCTGCAGCTGCTaGTGGCGCCGGCGCTCGGCCTCGCGCAGGATGTCG +
Preference number: 6 (lower is better)
Translates to: AAASSRLLRCSC*WRRRSASRRMS
Trigger: CGACATCCTGCGCGAGGCCGAGCGCCGGCGCCAGCAGCAGCTGCAGCGCAAGAGGCGCGACGAGGCGGCGGC
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 72 bp GACTCCCCAGAGCGCCCTTCATGCCGCCGCGACCACTaGGGGCCCGGGAGGGCAGCCCACGCGAGCGCGTCT +
Preference number: 6 (lower is better)
Translates to: DSPERPSCRRDH*GPGRAAHASAS
Trigger: AGACGCGCTCGCGTGGGCTGCCCTCCCGGGCCCGCAGTGGTCGCGGCGGCATGAAGGGCGCTCTGGGGAGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS CCA 72 bp GCCGCCTCGTCGCGCCTCTTGCGCTGCAGCTGCTGCTaGCGCCGGCGCTCGGCCTCGCGCAGGATGTCGAAC +
Preference number: 6 (lower is better)
Translates to: AASSRLLRCSCC*RRRSASRRMSN
Trigger: GTTCGACATCCTGCGCGAGGCCGAGCGCCGGCGCCAGCAGCAGCTGCAGCGCAAGAGGCGCGACGAGGCGGC
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 72 bp ATCCCCTCCGGCCCACGGCTGTCATTCCATCCTTGCTaGTCCCCTCTTCTAGGAGTCCGCTTCTGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: IPSGPRLSFHPC*SPLLGVRFWPG
Trigger: GCCGGGCCAGAAGCGGACTCCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAGCCGTGGGCCGGAGGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS CAA 90 bp AGCTCTTTCGAGCATCCCCTCCGGCCCACGGCTGTCATTCCATCCTaGCTGCTCCCCTCTTCTAGGAGTCCGCTTCTGGCCCGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: SSFEHPLRPTAVIPS*LLPSSRSPLLARRL
Trigger: CAGGCGCCGGGCCAGAAGCGGACTCCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAGCCGTGGGCCGGAGGGGATGCTCGAAAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 72 bp AGCATCCCCTCCGGCCCACGGCTGTCATTCCATCCTTaGTGCTCCCCTCTTCTAGGAGTCCGCTTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SIPSGPRLSFHP*CSPLLGVRFWP
Trigger: GGGCCAGAAGCGGACTCCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAGCCGTGGGCCGGAGGGGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS CCA 72 bp CCTCTTCCGGGGTGCCCTGGGACTCCTCCACCACTGTaGGTTCCTCCATCGGTGCAGTTGGCTCCACATCAC +
Preference number: 6 (lower is better)
Translates to: PLPGCPGTPPPL*VPPSVQLAPHH
Trigger: GTGATGTGGAGCCAACTGCACCGATGGAGGAACCCACAGTGGTGGAGGAGTCCCAGGGCACCCCGGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS CAA 72 bp GAGCATCCCCTCCGGCCCACGGCTGTCATTCCATCCTaGCTGCTCCCCTCTTCTAGGAGTCCGCTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: EHPLRPTAVIPS*LLPSSRSPLLA
Trigger: GGCCAGAAGCGGACTCCTAGAAGAGGGGAGCAGCAAGGATGGAATGACAGCCGTGGGCCGGAGGGGATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375249.5
ENST00000375251.7
CDS GCA 72 bp TTGCATCACCACTTCTGCTCTGGGTCCATAGTTCTCTaGCCTCCTGATCCTTCCCCGGCCTCCCCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: LHHHFCSGSIVL*PPDPSPASPGA
Trigger: GGCACCCGGGGAGGCCGGGGAAGGATCAGGAGGGCAGAGAACTATGGACCCAGAGCAGAAGTGGTGATGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS CCA 72 bp GGAACTTTGGCTGGAGACTCCTCTTCCGGGGTGCCCTaGGACTCCTCCACCACTGTGGGTTCCTCCATCGGT +
Preference number: 6 (lower is better)
Translates to: GTLAGDSSSGVP*DSSTTVGSSIG
Trigger: ACCGATGGAGGAACCCACAGTGGTGGAGGAGTCCCAGGGCACCCCGGAAGAGGAGTCTCCAGCCAAAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS GCA 72 bp AAAGTCTCCCCACAGGTGTGCAGTGCAGCTCCGCGGTaGTGGGAAACAGGGCTCTTTCAAGACAGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: KVSPQVCSAAPR*WETGLFQDSAG
Trigger: CCCTGCGCTGTCTTGAAAGAGCCCTGTTTCCCAGCACCGCGGAGCTGCACTGCACACCTGTGGGGAGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS CCA 72 bp GTCTCCCCACAGGTGTGCAGTGCAGCTCCGCGGTGCTaGGAAACAGGGCTCTTTCAAGACAGCGCAGGGAAA +
Preference number: 6 (lower is better)
Translates to: VSPQVCSAAPRC*ETGLFQDSAGK
Trigger: TTTCCCTGCGCTGTCTTGAAAGAGCCCTGTTTCCCAGCACCGCGGAGCTGCACTGCACACCTGTGGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS GCA 72 bp CTGGGACTCCTCCACCACTGTGGGTTCCTCCATCGGTaGAGTTGGCTCCACATCACTGGTATCTTTACCCGA +
Preference number: 6 (lower is better)
Translates to: LGLLHHCGFLHR*SWLHITGIFTR
Trigger: TCGGGTAAAGATACCAGTGATGTGGAGCCAACTGCACCGATGGAGGAACCCACAGTGGTGGAGGAGTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS CCA 72 bp CTCCTCCACCACTGTGGGTTCCTCCATCGGTGCAGTTaGCTCCACATCACTGGTATCTTTACCCGATCCCCA +
Preference number: 6 (lower is better)
Translates to: LLHHCGFLHRCS*LHITGIFTRSP
Trigger: TGGGGATCGGGTAAAGATACCAGTGATGTGGAGCCAACTGCACCGATGGAGGAACCCACAGTGGTGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS CAA 72 bp ACTCCTCCACCACTGTGGGTTCCTCCATCGGTGCAGTaGGCTCCACATCACTGGTATCTTTACCCGATCCCC +
Preference number: 6 (lower is better)
Translates to: TPPPLWVPPSVQ*APHHWYLYPIP
Trigger: GGGGATCGGGTAAAGATACCAGTGATGTGGAGCCAACTGCACCGATGGAGGAACCCACAGTGGTGGAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS CCA 72 bp AAGACAGCGCAGGGAAATCTTCCGGGTCATCTGGGTTaGGGGCAACATCTTGCATCACCACTTCTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: KTAQGNLPGHLG*GQHLASPLLLW
Trigger: CCAGAGCAGAAGTGGTGATGCAAGATGTTGCCCCCAACCCAGATGACCCGGAAGATTTCCCTGCGCTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS CAA 72 bp CAAGACAGCGCAGGGAAATCTTCCGGGTCATCTGGGTaGGGGGCAACATCTTGCATCACCACTTCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: QDSAGKSSGSSG*GATSCITTSAL
Trigger: CAGAGCAGAAGTGGTGATGCAAGATGTTGCCCCCAACCCAGATGACCCGGAAGATTTCCCTGCGCTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS CAA 90 bp TGCACCAGTCCACACCCAGTGGGATGGTTAGAACCAAAACGACATTaGACAAGCGTTGGGGAGGATGTGGAGAAACTGGAACCCACATAC +
Preference number: 6 (lower is better)
Translates to: CTSPHPVGWLEPKRH*TSVGEDVEKLEPTY
Trigger: GTATGTGGGTTCCAGTTTCTCCACATCCTCCCCAACGCTTGTCAAATGTCGTTTTGGTTCTAACCATCCCACTGGGTGTGGACTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS CCA 72 bp AAACCACAGAGCTGCACCAGTCCACACCCAGTGGGATaGTTAGAACCAAAACGACATTTGACAAGCGTTGGG +
Preference number: 6 (lower is better)
Translates to: KPQSCTSPHPVG*LEPKRHLTSVG
Trigger: CCCAACGCTTGTCAAATGTCGTTTTGGTTCTAACCATCCCACTGGGTGTGGACTGGTGCAGCTCTGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS TCA 72 bp AGAAACTGGAACCCACATACACTGCCAGTGGGAATGTaGAATGGTGTAGCCTCTTTGGAAAGCAGTCTGGCG +
Preference number: 6 (lower is better)
Translates to: RNWNPHTLPVGM*NGVASLESSLA
Trigger: CGCCAGACTGCTTTCCAAAGAGGCTACACCATTTCACATTCCCACTGGCAGTGTATGTGGGTTCCAGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS CCA 72 bp CCAGGACGAGGGAGGTTACCAAAATTAATCTCCAGCTaGGATGTGATGTCATTGGCGGGTTTCCGGAAAACA +
Preference number: 6 (lower is better)
Translates to: PGRGRLPKLISS*DVMSLAGFRKT
Trigger: TGTTTTCCGGAAACCCGCCAATGACATCACATCCCAGCTGGAGATTAATTTTGGTAACCTCCCTCGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375249.5
ENST00000375251.7
ENST00000466976.1
CDS CAA 72 bp CCCGATCCCCAGGTTCGAACTCCACATCCACCCATGTaGTCTTCAGTTCTGACTGCTATTTTGTCATTCCCA +
Preference number: 6 (lower is better)
Translates to: PDPQVRTPHPPM*SSVLTAILSFP
Trigger: TGGGAATGACAAAATAGCAGTCAGAACTGAAGACAACATGGGTGGATGTGGAGTTCGAACCTGGGGATCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS CAA 72 bp CCACACCCAGTGGGATGGTTAGAACCAAAACGACATTaGACAAGCGTTGGGGAGGATGTGGAGAAACTGGAA +
Preference number: 6 (lower is better)
Translates to: PHPVGWLEPKRH*TSVGEDVEKLE
Trigger: TTCCAGTTTCTCCACATCCTCCCCAACGCTTGTCAAATGTCGTTTTGGTTCTAACCATCCCACTGGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS GCA 72 bp TGGTTTTTCATCTGGAAACTTCTCAGCTGTGAAGTCTaGCTGCCTCTCTGTCTCATAGGGTCGGTATTCCCT +
Preference number: 6 (lower is better)
Translates to: WFFIWKLLSCEV*LPLCLIGSVFP
Trigger: AGGGAATACCGACCCTATGAGACAGAGAGGCAGGCAGACTTCACAGCTGAGAAGTTTCCAGATGAAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375249.5
CDS CCA 72 bp GGGATGGTTAGAACCAAAACGACATTTGACAAGCGTTaGGGAGGATGTGGAGAAACTGGAACCCACATACAC +
Preference number: 6 (lower is better)
Translates to: GMVRTKTTFDKR*GGCGETGTHIH
Trigger: GTGTATGTGGGTTCCAGTTTCTCCACATCCTCCCCAACGCTTGTCAAATGTCGTTTTGGTTCTAACCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS GCA 72 bp AACTTTTTCATCTGGAAACTTCTCAGCTGTGAAGTCTaGCTGCCTCTCTGTCTCATAGGGTCGGTATTCCCT +
Preference number: 6 (lower is better)
Translates to: NFFIWKLLSCEV*LPLCLIGSVFP
Trigger: AGGGAATACCGACCCTATGAGACAGAGAGGCAGGCAGACTTCACAGCTGAGAAGTTTCCAGATGAAAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375251.7
CDS CCA 72 bp ATACATAAAGAATTCTTTATGAACAGCCAAGCGTGGTaGCTCATGCCGATAGTCCTAGCTACTCAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: IHKEFFMNSQAW*LMPIVLATQGA
Trigger: AGCCCCCTGAGTAGCTAGGACTATCGGCATGAGCCACCACGCTTGGCTGTTCATAAAGAATTCTTTATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS CCA 72 bp CACCATCCTGATGACATTAACATCACACTTCACCACTaGCACTCCCTTCCAGACAGCATGACAGACAAAATG +
Preference number: 6 (lower is better)
Translates to: HHPDDINITLHH*HSLPDSMTDKM
Trigger: CATTTTGTCTGTCATGCTGTCTGGAAGGGAGTGCCAGTGGTGAAGTGTGATGTTAATGTCATCAGGATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466976.1
CDS CAA 90 bp GTATCTTTACCCGATCCCCAGGTTCGAACTCCACATCCACCCATGTaGTCTTCAGTTCTGACTGCTATTTTGTCATTCCCACCATATCTT +
Preference number: 6 (lower is better)
Translates to: VSLPDPQVRTPHPPM*SSVLTAILSFPPYL
Trigger: AAGATATGGTGGGAATGACAAAATAGCAGTCAGAACTGAAGACAACATGGGTGGATGTGGAGTTCGAACCTGGGGATCGGGTAAAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375249.5