RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HABP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000148702

Ensembl transcript IDs: ENST00000351270.4, ENST00000460714.1, ENST00000542051.5

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGTGTGGTCCCCTGGAGGCTCTGGAGGTGTCCATTGTTGGCCATaGGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGG +
Preference number: 1 (lower is better)
Translates to: TVWSPGGSGGVHCWP*GLPVSGCQGEWALR
Trigger: CCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGACACCTCCAGAGCCTCCAGGGGACCACACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 90 bp CTGCTTAGAGTAGGGATAGTCTACTGTGTGGTCCCCTGGAGGCTCTaGAGGTGTCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTG +
Preference number: 1 (lower is better)
Translates to: LLRVGIVYCVVPWRL*RCPLLAMRPPGVRV
Trigger: CACCCTGACACCGGGAGGCCTCATGGCCAACAATGGACACCTCCAGAGCCTCCAGGGGACCACACAGTAGACTATCCCTACTCTAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 90 bp CAGTTGTCTCTGCTTAGAGTAGGGATAGTCTACTGTGTGGTCCCCTaGAGGCTCTGGAGGTGTCCATTGTTGGCCATGAGGCCTCCCGGT +
Preference number: 1 (lower is better)
Translates to: QLSLLRVGIVYCVVP*RLWRCPLLAMRPPG
Trigger: ACCGGGAGGCCTCATGGCCAACAATGGACACCTCCAGAGCCTCCAGGGGACCACACAGTAGACTATCCCTACTCTAAGCAGAGACAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR TCA 90 bp GGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTaGGATTCTGCACGTCAAAAAGAAGAAGGCCCTGCTGTTGTGAGC +
Preference number: 1 (lower is better)
Translates to: GGWRSSEWGGEPRCH*DSARQKEEGPAVVS
Trigger: GCTCACAACAGCAGGGCCTTCTTCTTTTTGACGTGCAGAATCTCAGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 90 bp GTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTaGTCTGGGAAGGCCCAGGCTGGGTGGCAGTTGTCTCTGCTTAGA +
Preference number: 1 (lower is better)
Translates to: VTKGGRRSLVILCKC*SGKAQAGWQLSLLR
Trigger: TCTAAGCAGAGACAACTGCCACCCAGCCTGGGCCTTCCCAGACCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR TCA 90 bp GCCAGAGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTaGTTTCGGCAAGCTGGAATGGCCCACCAGCCCATCCCAGATCTT +
Preference number: 1 (lower is better)
Translates to: AREEVCSPETGFRWL*FRQAGMAHQPIPDL
Trigger: AAGATCTGGGATGGGCTGGTGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR GCA 90 bp GTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAGTCTaGATTTTGAACCCTACTTTGTTCAGAAGAAAGAAGCCAGGTCTA +
Preference number: 1 (lower is better)
Translates to: VTFAERVRDSLDMTV*ILNPTLFRRKKPGL
Trigger: TAGACCTGGCTTCTTTCTTCTGAACAAAGTAGGGTTCAAAATGCAGACTGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 90 bp GTAAGGAAAGCAAACATACTATGTTGTGTTGATTCCATCATTCCTTaGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAA +
Preference number: 1 (lower is better)
Translates to: VRKANILCCVDSIIP*VTKGGRRSLVILCK
Trigger: TTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGGAATGATGGAATCAACACAACATAGTATGTTTGCTTTCCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCTCCCGGTGTCAGGGTaGCAAGGAGAGTGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRLPVSG*QGEWAL
Trigger: CAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAG...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGTTCGGCAAGCTGGAATaGCCCACCAGCCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: SAEANLPGLHQSRARAAQFGKLE*PTSPSQ
Trigger: CTGGGATGGGCTGGTGGGCCATTCCAGCTTGCCGAA...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGATGGTGGTTCCCGCTaGTGCTGGGGATTCTGGAGT +
Preference number: 2 (lower is better)
Translates to: SAEANLPGLHQSRARAAQDGGSR*CWGFWS
Trigger: ACTCCAGAATCCCCAGCATCAGCGGGAACCACCATC...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGAAGGCCCAGGCTGGGTaGCAGTTGTCTCTGCTTAGA +
Preference number: 2 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRKAQAG*QLSLLR
Trigger: TCTAAGCAGAGACAACTGCCACCCAGCCTGGGCCTT...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 90 bp ATAGTCTACTGTGTGGTCCCCTGGAGGCTCTGGAGGTGTCCATTGTaGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: IVYCVVPWRLWRCPL*AMRPPGVRVPRRVG
Trigger: GCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGACACCTCCAGAGCCTCCAGGGGACCACACAGTAGACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGTCTGCATTTGCAGGATaGCTGTGGTGGAGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRSAFAG*LWWRQS
Trigger: AGACTGCCTCCACCACAGGCATCCTGCAAATGCAGA...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGGTGAGCCTGTTAAATaGTCCCTGTGCTTCTTAGCG +
Preference number: 2 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRGEPVK*SLCFLA
Trigger: CGCTAAGAAGCACAGGGAGCATTTAACAGGCTCACC...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGTTGATTTCGGCAAGCTaGAATGGCCCACCAGCCCAT +
Preference number: 2 (lower is better)
Translates to: SAEANLPGLHQSRARAAQLISAS*NGPPAH
Trigger: ATGGGCTGGTGGGCCATTCCAGCTTGCCGAAATCAA...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGTTAAATGCTCCCTGTaGTTCTTAGCGTGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRVKCSL*FLACPV
Trigger: CACAGGACACGCTAAGAAGCACAGGGAGCATTTAAC...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTTACTGTGTGGTCCCCTaGAGGCTCTGGAGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATYCVVP*RLWRCP
Trigger: TGGACACCTCCAGAGCCTCCAGGGGACCACACAGTA...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGGTCCATTGTTGGCCATaGGGCCTCCCGGTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWVHCWP*GLPVSG
Trigger: CCCTGACACCGGGAGGCCTCATGGCCAACAATGGAC...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGAAGCCAGGTCTAAATaGGAGATTGGCTTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: SAEANLPGLHQSRARAAQEARSK*EIGFAF
Trigger: GAAAGCAAAGCCAATCTCTCATTTAGACCTGGCTTC...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCTGGATATGACAGTCTaGATTTTGAACCCTACTTTG +
Preference number: 2 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRLDMTV*ILNPTL
Trigger: CAAAGTAGGGTTCAAAATGCAGACTGTCATATCCAG...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAGTCCCCTGGAGGCTCTaGAGGTGTCCATTGTTGGCC +
Preference number: 2 (lower is better)
Translates to: FTRDRLQMALISASWNGPVPWRL*RCPLLA
Trigger: GGCCAACAATGGACACCTCCAGAGCCTCCAGGGGAC...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 90 bp GGCCAGAGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTaGATTTCGGCAAGCTGGAATGGCCCACCAGCCCATCCCAGATCT +
Preference number: 2 (lower is better)
Translates to: GQRGSLFTRDRLQMA*ISASWNGPPAHPRS
Trigger: AGATCTGGGATGGGCTGGTGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGGCAGAAGAAGCCTGGTaGTATTGTGCAAATGCTGGT +
Preference number: 2 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGAEEAW*YCANAG
Trigger: ACCAGCATTTGCACAATATCACCAGGCTTCTTCTGC...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGGAACCCAGATGCCACTaGGATTCTGCACGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGEPRCH*DSARQK
Trigger: TTTTTGACGTGCAGAATCTCAGTGGCATCTGGGTTC...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTGTGATATTGTGCAAATaGTGGTCTGGGAAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATVILCK*WSGKAQ
Trigger: CTGGGCCTTCCCAGACCAGCATTTGCACAATATCAC...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGATACCTAGACGTGGATaGCTGATTCTGTTGAGTGCC +
Preference number: 2 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGIPRRG*LILLSA
Trigger: GGCACTCAACAGAATCAGCCATCCACGTCTAGGTAT...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCGTCCCCTGGAGGCTCTaGAGGTGTCCATTGTTGGCC +
Preference number: 2 (lower is better)
Translates to: RGSLFTRDRLQMALISASVPWRL*RCPLLA
Trigger: GGCCAACAATGGACACCTCCAGAGCCTCCAGGGGAC...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAAAGGCCCAGGCTGGGTaGCAGTTGTCTCTGCTTAGA +
Preference number: 2 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTKAQAG*QLSLLR
Trigger: TCTAAGCAGAGACAACTGCCACCCAGCCTGGGCCTT...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGGTCCATTGTTGGCCATaGGGCCTCCCGGTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILVHCWP*GLPVSG
Trigger: CCCTGACACCGGGAGGCCTCATGGCCAACAATGGAC...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGCTCCCGGTGTCAGGGTaGCAAGGAGAGTGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILLPVSG*QGEWAL
Trigger: CAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAG...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACATTGATTTCGGCAAGCTaGAATGGCCCACCAGCCCAT +
Preference number: 2 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTLISAS*NGPPAH
Trigger: ATGGGCTGGTGGGCCATTCCAGCTTGCCGAAATCAA...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACATTCTCATTCCTGCCTTaGAGGCCCTTTTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTFSFLP*RPFFLG
Trigger: CCCCAAGAAAAAGGGCCTTCAAGGCAGGAATGAGAA...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAATATTGTGCAAATGCTaGTCTGGGAAGGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTILCKC*SGKAQA
Trigger: AGCCTGGGCCTTCCCAGACCAGCATTTGCACAATAT...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGATTCCATCATTCCTTaGGTTACCAAGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADDSIIP*VTKGGR
Trigger: TCTGCCTCCCTTGGTAACCCAAGGAATGATGGAATC...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAGCAGAAGAAGCCTGGTaGTATTGTGCAAATGCTGGT +
Preference number: 2 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTAEEAW*YCANAG
Trigger: ACCAGCATTTGCACAATATCACCAGGCTTCTTCTGC...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTCATACTATGTTGTGTTaGTTCCATCATTCCTTGGGT +
Preference number: 2 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATHTMLC*FHHSLG
Trigger: ACCCAAGGAATGATGGAATCAACACAACATAGTATG...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAGAACCCAGATGCCACTaGGATTCTGCACGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTEPRCH*DSARQK
Trigger: TTTTTGACGTGCAGAATCTCAGTGGCATCTGGGTTC...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTCTGGAGTCTGCATTTaGAGGATGCCTGTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: RGSLFTRDRLQMALISASSGVCI*RMPVVE
Trigger: CTCCACCACAGGCATCCTGCAAATGCAGACTCCAGA...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGAGAATGTTGTATTTGTaGTCCTCTCTGATACCTAGA +
Preference number: 2 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGRMLYL*SSLIPR
Trigger: TCTAGGTATCAGAGAGGACCACAAATACAACATTCT...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGAGTCTCTGTGAACACTaGTTTTCTAGAAGGTACAAT +
Preference number: 2 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGSLCEH*FSRRYN
Trigger: ATTGTACCTTCTAGAAAATCAGTGTTCACAGAGACT...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGTCTGCATTTGCAGGATaGCTGTGGTGGAGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILSAFAG*LWWRQS
Trigger: AGACTGCCTCCACCACAGGCATCCTGCAAATGCAGA...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGTCTGGAGTCTGCATTTaGAGGATGCCTGTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILSGVCI*RMPVVE
Trigger: CTCCACCACAGGCATCCTGCAAATGCAGACTCCAGA...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCGATTCCATCATTCCTTaGGTTACCAAGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: RGSLFTRDRLQMALISASDSIIP*VTKGGR
Trigger: TCTGCCTCCCTTGGTAACCCAAGGAATGATGGAATC...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 90 bp ACTTTGTTCAGAAGAAAGAAGCCAGGTCTAAATGAGAGATTGGCTTaGCTTTCTCATTCCTGCCTTGAAGGCCCTTTTTCTTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: TLFRRKKPGLNERLA*LSHSCLEGPFSWGG
Trigger: CCCTCCCCAAGAAAAAGGGCCTTCAAGGCAGGAATGAGAAAGCAAAGCCAATCTCTCATTTAGACCTGGCTTCTTTCTTCTGAACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 90 bp TTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAGTCTGCATTTaGAACCCTACTTTGTTCAGAAGAAAGAAGCCAGGTCTAAATGAG +
Preference number: 2 (lower is better)
Translates to: FAERVRDSLDMTVCI*NPTLFRRKKPGLNE
Trigger: CTCATTTAGACCTGGCTTCTTTCTTCTGAACAAAGTAGGGTTCAAAATGCAGACTGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR TCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAAGTCTCTGTGAACACTaGTTTTCTAGAAGGTACAAT +
Preference number: 2 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTSLCEH*FSRRYN
Trigger: ATTGTACCTTCTAGAAAATCAGTGTTCACAGAGACT...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 90 bp GTCAGGGACTCGCTGGATATGACAGTCTGCATTTTGAACCCTACTTaGTTCAGAAGAAAGAAGCCAGGTCTAAATGAGAGATTGGCTTTG +
Preference number: 2 (lower is better)
Translates to: VRDSLDMTVCILNPT*FRRKKPGLNERLAL
Trigger: CAAAGCCAATCTCTCATTTAGACCTGGCTTCTTTCTTCTGAACAAAGTAGGGTTCAAAATGCAGACTGTCATATCCAGCGAGTCCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR TCA 72 bp TCCCCTGGAGGCTCTGGAGGTGTCCATTGTTGGCCATaGGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGG +
Preference number: 3 (lower is better)
Translates to: SPGGSGGVHCWP*GLPVSGCQGEW
Trigger: CCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGACACCTCCAGAGCCTCCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCAGGCTGGGTGGCAGTaGTCTCTGCTTAGAGTAGGG +
Preference number: 3 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRQAGWQ*SLLRVG
Trigger: CCCTACTCTAAGCAGAGACAACTGCCACCCAGCCTG...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGGATGGCTGATTCTGTaGAGTGCCTCGAGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRGWLIL*SASSVW
Trigger: CCAGACACTCGAGGCACTCAACAGAATCAGCCATCC...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGTTCTGGAGTCTGCATTaGCAGGATGCCTGTGGTGGA +
Preference number: 3 (lower is better)
Translates to: SAEANLPGLHQSRARAAQFWSLH*QDACGG
Trigger: TCCACCACAGGCATCCTGCAAATGCAGACTCCAGAA...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR GCA 72 bp AAGGAAAGGGAGGGTGAGCCTGTTAAATGCTCCCTGTaGTTCTTAGCGTGTCCTGTGGGAACCGGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: KEREGEPVKCSL*FLACPVGTGAG
Trigger: CCCGGCCCCGGTTCCCACAGGACACGCTAAGAAGCACAGGGAGCATTTAACAGGCTCACCCTCCCTTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 72 bp GTAGGGATAGTCTACTGTGTGGTCCCCTGGAGGCTCTaGAGGTGTCCATTGTTGGCCATGAGGCCTCCCGGT +
Preference number: 3 (lower is better)
Translates to: VGIVYCVVPWRL*RCPLLAMRPPG
Trigger: ACCGGGAGGCCTCATGGCCAACAATGGACACCTCCAGAGCCTCCAGGGGACCACACAGTAGACTATCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGCAGGCTGGGTGGCAGTaGTCTCTGCTTAGAGTAGGG +
Preference number: 3 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGQAGWQ*SLLRVG
Trigger: CCCTACTCTAAGCAGAGACAACTGCCACCCAGCCTG...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGGGCCAGAGAGGAAGTTaGTTCACCAGAGACAGGCTT +
Preference number: 3 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGGQRGS*FTRDRL
Trigger: AAGCCTGTCTCTGGTGAACAAACTTCCTCTCTGGCC...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR GCA 72 bp AAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATaGTGGTCTGGGAAGGCCCAGGCTGGGTGGCAGTTG +
Preference number: 3 (lower is better)
Translates to: KGGRRSLVILCK*WSGKAQAGWQL
Trigger: CAACTGCCACCCAGCCTGGGCCTTCCCAGACCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR GCA 72 bp GTTCCCGCTGATGCTGGGGATTCTGGAGTCTGCATTTaGAGGATGCCTGTGGTGGAGGCAGTCTCTGTGAAC +
Preference number: 3 (lower is better)
Translates to: VPADAGDSGVCI*RMPVVEAVSVN
Trigger: GTTCACAGAGACTGCCTCCACCACAGGCATCCTGCAAATGCAGACTCCAGAATCCCCAGCATCAGCGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 72 bp GGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTaGTCTGGGAAGGCCCAGGCTGGGTGGCAGTTGTCT +
Preference number: 3 (lower is better)
Translates to: GGRRSLVILCKC*SGKAQAGWQLS
Trigger: AGACAACTGCCACCCAGCCTGGGCCTTCCCAGACCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGACATACTATGTTGTGTaGATTCCATCATTCCTTGGG +
Preference number: 3 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRTYYVV*IPSFLG
Trigger: CCCAAGGAATGATGGAATCAACACAACATAGTATGT...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTGGCCAGAGAGGAAGTTaGTTCACCAGAGACAGGCTT +
Preference number: 3 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATGQRGS*FTRDRL
Trigger: AAGCCTGTCTCTGGTGAACAAACTTCCTCTCTGGCC...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 72 bp CTGCTTAGAGTAGGGATAGTCTACTGTGTGGTCCCCTaGAGGCTCTGGAGGTGTCCATTGTTGGCCATGAGG +
Preference number: 3 (lower is better)
Translates to: LLRVGIVYCVVP*RLWRCPLLAMR
Trigger: CCTCATGGCCAACAATGGACACCTCCAGAGCCTCCAGGGGACCACACAGTAGACTATCCCTACTCTAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGATTTTGAACCCTACTTaGTTCAGAAGAAAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRILNPT*FRRKKP
Trigger: TGGCTTCTTTCTTCTGAACAAAGTAGGGTTCAAAAT...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAGGATGGCTGATTCTGTaGAGTGCCTCGAGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTGWLIL*SASSVW
Trigger: CCAGACACTCGAGGCACTCAACAGAATCAGCCATCC...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGATTTTGAACCCTACTTaGTTCAGAAGAAAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: SAEANLPGLHQSRARAAQILNPT*FRRKKP
Trigger: TGGCTTCTTTCTTCTGAACAAAGTAGGGTTCAAAAT...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACATTCTGGAGTCTGCATTaGCAGGATGCCTGTGGTGGA +
Preference number: 3 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTFWSLH*QDACGG
Trigger: TCCACCACAGGCATCCTGCAAATGCAGACTCCAGAA...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTAGCAGATGGAGAATGTaGTATTTGTGGTCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATSRWRM*YLWSSL
Trigger: CAGAGAGGACCACAAATACAACATTCTCCATCTGCT...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGTGGAGGTGTCCATTGTaGGCCATGAGGCCTCCCGGT +
Preference number: 3 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILWRCPL*AMRPPG
Trigger: ACCGGGAGGCCTCATGGCCAACAATGGACACCTCCA...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR TCA 72 bp AGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTaGGATTCTGCACGTCAAAAAGAAGAAGGCCCTGCT +
Preference number: 3 (lower is better)
Translates to: RSSEWGGEPRCH*DSARQKEEGPA
Trigger: AGCAGGGCCTTCTTCTTTTTGACGTGCAGAATCTCAGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 72 bp TTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATaGCTGATTCTGTTGAGTGCCTCGAGTGTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: LYLWSSLIPRRG*LILLSASSVWA
Trigger: AGCCCAGACACTCGAGGCACTCAACAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR TCA 72 bp AACGCAGCTCAAACAAGGCGCCTAATTTCATGGGTCTaGGATGACCAGGCAGATGACACGCAGGTTAAACTT +
Preference number: 3 (lower is better)
Translates to: NAAQTRRLISWV*DDQADDTQVKL
Trigger: AAGTTTAACCTGCGTGTCATCTGCCTGGTCATCTCAGACCCATGAAATTAGGCGCCTTGTTTGAGCTGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCATGGAGAATGTTGTATTaGTGGTCCTCTCTGATACCT +
Preference number: 3 (lower is better)
Translates to: FTRDRLQMALISASWNGPWRMLY*WSSLIP
Trigger: AGGTATCAGAGAGGACCACAAATACAACATTCTCCA...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAACATACTATGTTGTGTaGATTCCATCATTCCTTGGG +
Preference number: 3 (lower is better)
Translates to: FTRDRLQMALISASWNGPTYYVV*IPSFLG
Trigger: CCCAAGGAATGATGGAATCAACACAACATAGTATGT...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR-3UTR CAA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAGAATGTTGTATTaGTGGTCCTCTCTGATACCT +
Preference number: 3 (lower is better)
Translates to: RGSLFTRDRLQMALISASWRMLY*WSSLIP
Trigger: AGGTATCAGAGAGGACCACAAATACAACATTCTCCA...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR GCA 72 bp GCAGAAAGGGTCAGGGACTCGCTGGATATGACAGTCTaGATTTTGAACCCTACTTTGTTCAGAAGAAAGAAG +
Preference number: 3 (lower is better)
Translates to: AERVRDSLDMTV*ILNPTLFRRKK
Trigger: CTTCTTTCTTCTGAACAAAGTAGGGTTCAAAATGCAGACTGTCATATCCAGCGAGTCCCTGACCCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR TCA 72 bp ATTTTTGGCCAAAGGTCAGCTAGCTCTAAAGAAGTGTaGAACGCAGCTCAAACAAGGCGCCTAATTTCATGG +
Preference number: 3 (lower is better)
Translates to: IFGQRSASSKEV*NAAQTRRLISW
Trigger: CCATGAAATTAGGCGCCTTGTTTGAGCTGCGTTTCACACTTCTTTAGAGCTAGCTGACCTTTGGCCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CCA 72 bp GCAAACATACTATGTTGTGTTGATTCCATCATTCCTTaGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATA +
Preference number: 3 (lower is better)
Translates to: ANILCCVDSIIP*VTKGGRRSLVI
Trigger: TATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGGAATGATGGAATCAACACAACATAGTATGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGACTGGAGGGACGCCTaGCATGGGTGCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRDWRDA*HGCLPA
Trigger: GGCGGGCAAGCACCCATGGCAGGCGTCCCTCCAGTC...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGAGCACCCAGCAGGGGTaGATCAGCGCCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRSTQQG*ISAPPQ
Trigger: CTGTGGTGGGGCGCTGATCCACCCCTGCTGGGTGCT...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGCTCCCGGTGTCAGGGTaGCAAGGAGAGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQLPVSG*QGEWAL
Trigger: CAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAG...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGTCCCCTGGAGGCTCTaGAGGTGTCCATTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRVPWRL*RCPLLA
Trigger: GGCCAACAATGGACACCTCCAGAGCCTCCAGGGGAC...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 72 bp TGTGTGGTCCCCTGGAGGCTCTGGAGGTGTCCATTGTaGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CVVPWRLWRCPL*AMRPPGVRVPR
Trigger: CCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGACACCTCCAGAGCCTCCAGGGGACCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCGACGCCTGCCATGGGTaGTTGCCCGCCGTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLDACHG*LPAVLL
Trigger: TAAGAGCACGGCGGGCAAGCACCCATGGCAGGCGTC...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCACAGAATTTCCCCTTaGACTGGTCGGGACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRHRISP*TGRDRH
Trigger: GTGCCTGTCCCGACCAGTTCAAGGGGAAATTCTGTG...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTGACTGGAGGGACGCCTaGCATGGGTGCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATDWRDA*HGCLPA
Trigger: GGCGGGCAAGCACCCATGGCAGGCGTCCCTCCAGTC...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGCAGGTAGCCCCATTCTaGCAGGGGTTTGGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQQVAPF*QGFGLH
Trigger: ATGCAGGCCAAACCCCTGCCAGAATGGGGCTACCTG...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGTGGTTGATGGCTCAGTaGGGCTTTCCTCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRWLMAQ*GFPLGR
Trigger: CCTACCCAGAGGAAAGCCCCACTGAGCCATCAACCA...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTGAGGGACGCCTGCCATaGGTGCTTGCCCGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATEGRLP*VLARRA
Trigger: AGCACGGCGGGCAAGCACCCATGGCAGGCGTCCCTC...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCCCTCCAGAGTCACCCTaGCAGGTGTCTTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLPPESP*QVSCPG
Trigger: ACCTGGGCAAGACACCTGCCAGGGTGACTCTGGAGG...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGGTCCATTGTTGGCCATaGGGCCTCCCGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGVHCWP*GLPVSG
Trigger: CCCTGACACCGGGAGGCCTCATGGCCAACAATGGAC...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCGGCAGGGGTTTGGCCTaGATACAGGAACCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLGRGLA*IQEPLG
Trigger: CCCAAGTGGTTCCTGTATGCAGGCCAAACCCCTGCC...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTTGGATCTCCGCTTATaGCGGGAGCAGGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLLDLRL*REQVAP
Trigger: TGGGGCTACCTGCTCCCGGCATAAGCGGAGATCCAA...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGTGGGTAATGAGACATTaGCCCCGGCCACATGGGTTG +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQWVMRH*PRPHGL
Trigger: CAACCCATGTGGCCGGGGCCAATGTCTCATTACCCA...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGCATACAGGAACCACTTaGGAGCAGCTGGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQHTGTT*EQLGPV
Trigger: CACAGGTCCCAGCTGCTCCCAAGTGGTTCCTGTATG...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGAATTTCCCCTTGAACTaGTCGGGACAGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRNFPLN*SGQAQV
Trigger: CACCTGTGCCTGTCCCGACCAGTTCAAGGGGAAATT...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTCAAACCCCGGAAGCTTaGTTGATGGCTCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSQTPEA*LMAQWG
Trigger: GCCCCACTGAGCCATCAACCAAGCTTCCGGGGTTTG...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTCCACAGAAGTGGCCCTaGGGCATGGAGATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSPQKWP*GMEMVR
Trigger: TCTGACCATCTCCATGCCCCAGGGCCACTTCTGTGG...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCAAGGCCCTGCTGTTGTaGGCCATGTCCACCCTGATT +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLKALLL*AMSTLI
Trigger: AATCAGGGTGGACATGGCTCACAACAGCAGGGCCTT...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTTGGTTGATGGCTCAGTaGGGCTTTCCTCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSWLMAQ*GFPLGR
Trigger: CCTACCCAGAGGAAAGCCCCACTGAGCCATCAACCA...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTGCCCCACCACAGAAGTaGCCCTGGGGCATGGAGATG +
Preference number: 4 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATAPPQK*PWGMEM
Trigger: CATCTCCATGCCCCAGGGCCACTTCTGTGGTGGGGC...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGTCTTTCTTCAGGTCCTaGTCCCCTAGCACCACCTTT +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRSFFRS*SPSTTF
Trigger: AAAGGTGGTGCTAGGGGACCAGGACCTGAAGAAAGA...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCAAGGCCCAGGCTGGGTaGCAGTTGTCTCTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLKAQAG*QLSLLR
Trigger: TCTAAGCAGAGACAACTGCCACCCAGCCTGGGCCTT...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGAGGCAGATGTGAACTaGTTGAGGAGGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQEADVN*LRRRWA
Trigger: TGCCCATCTCCTCCTCAACCAGTTCACATCTGCCTC...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542051.5
CDS-3UTR TCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGATTCTAGAGCACAGTaGCCATCCACTGGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRDSRAQ*PSTGFN
Trigger: GTTAAAGCCAGTGGATGGTCACTGTGCTCTAGAATC...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGTGTTGGCAATCAGCTTaGCTTTGGCATCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQCWQSA*LWHPGA
Trigger: AGCTCCTGGATGCCAAAGTCAAGCTGATTGCCAACA...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCTAATTTCATGGGTCTaGGATGACCAGGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRLISWV*DDQADD
Trigger: GTCATCTGCCTGGTCATCTCAGACCCATGAAATTAG...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCCATAGACGTAGTAGGTaGCGTCCTTCTCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVHRRSR*RPSHRS
Trigger: TGACCTGTGAGAAGGACGGCACCTACTACGTCTATG...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGAAAAGAAGAAGGCCCTaGTGTTGTGAGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRKRRRP*CCEPCP
Trigger: TGGACATGGCTCACAACAGCAGGGCCTTCTTCTTTT...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGCTGTGCTGACTGCTTaGTCGTTACATTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRAVLTA*SLHSQK
Trigger: TTTCTGCGAATGTAACGAGCAAGCAGTCAGCACAGC...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCCCAGGCTGTGCTGACTaGTTGCTCGTTACATTCGCA +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLPGCAD*LLVTFA
Trigger: TGCGAATGTAACGAGCAAGCAGTCAGCACAGCCTGG...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCTCAGGATTCTCAGCGTaGGTAAGTGTGCTACTGGTG +
Preference number: 4 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVSGFSA*VSVLLV
Trigger: CACCAGTAGCACACTTACCCACGCTGAGAATCCTGA...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGGTGAAGGTGCTCCCATaGACGAGGCAGTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGVKVLP*TRQSPP
Trigger: CGGTGGGGACTGCCTCGTCCATGGGAGCACCTTCAC...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAAACCCCGGAAGCTTaGTTGATGGCTCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGQTPEA*LMAQWG
Trigger: GCCCCACTGAGCCATCAACCAAGCTTCCGGGGTTTG...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAGAGGGACGCCTGCCATaGGTGCTTGCCCGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPEGRLP*VLARRA
Trigger: AGCACGGCGGGCAAGCACCCATGGCAGGCGTCCCTC...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATAGAGGCAGCGAGGACTaGAGGGACGCCTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADRGSED*RDACHG
Trigger: CCCATGGCAGGCGTCCCTCCAGTCCTCGCTGCCTCT...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATAGCACCCAGCAGGGGTaGATCAGCGCCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADSTQQG*ISAPPQ
Trigger: CTGTGGTGGGGCGCTGATCCACCCCTGCTGGGTGCT...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGATACCTAGACGTGGATaGCTGATTCTGTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRIPRRG*LILLSA
Trigger: GGCACTCAACAGAATCAGCCATCCACGTCTAGGTAT...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGGCACGCATGCTGGTTaGCTGTCCTATTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSGTHAG*LSYSFS
Trigger: GGAAAATGAATAGGACAGTCAACCAGCATGCGTGCC...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGCCCCGGAAGCTTGGTTaGTGGCTCAGTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGPRKLG*WLSGAF
Trigger: GAAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGG...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGAAGGCCCTGCTGTTGTaGGCCATGTCCACCCTGATT +
Preference number: 4 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGKALLL*AMSTLI
Trigger: AATCAGGGTGGACATGGCTCACAACAGCAGGGCCTT...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGAGTGGGGCTTTCCTCTaGGTAGGCAACGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGSGAFL*VGNVLG
Trigger: GCCCAGGACGTTGCCTACCCAGAGGAAAGCCCCACT...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAAGAGGCAGCGAGGACTaGAGGGACGCCTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPRGSED*RDACHG
Trigger: CCCATGGCAGGCGTCCCTCCAGTCCTCGCTGCCTCT...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTCTTGCCCAGGTTTCTaGAGATTTCCTGCACAGATC +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLSCPGF*RFPAQI
Trigger: GATCTGTGCAGGAAATCTTCAGAAACCTGGGCAAGA...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAGTCCATTGTTGGCCATaGGGCCTCCCGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPVHCWP*GLPVSG
Trigger: CCCTGACACCGGGAGGCCTCATGGCCAACAATGGAC...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGCAGAAGAAGCCTGGTaGTATTGTGCAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSAEEAW*YCANAG
Trigger: ACCAGCATTTGCACAATATCACCAGGCTTCTTCTGC...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCGAAGCCAGGTCTAAATaGGAGATTGGCTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVEARSK*EIGFAF
Trigger: GAAAGCAAAGCCAATCTCTCATTTAGACCTGGCTTC...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGGACGCCTGCCATGGGTaGTTGCCCGCCGTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWDACHG*LPAVLL
Trigger: TAAGAGCACGGCGGGCAAGCACCCATGGCAGGCGTC...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTCGTGTTCACAGGGGTTaGGCTGGCATGGATCAGCTT +
Preference number: 4 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATRVHRG*AGMDQL
Trigger: AAGCTGATCCATGCCAGCCCAACCCCTGTGAACACG...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGGTGAAGGTGCTCCCATaGACGAGGCAGTCCCCACCG +
Preference number: 4 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWVKVLP*TRQSPP
Trigger: CGGTGGGGACTGCCTCGTCCATGGGAGCACCTTCAC...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTTTGGCCCCGGCCACATaGGTTGTCCTTGCACGTATT +
Preference number: 4 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATLAPAT*VVLARI
Trigger: AATACGTGCAAGGACAACCCATGTGGCCGGGGCCAA...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGCTTTTCGTCCGCATCTaGGTTTCTGCAGAAATTGTG +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQLFVRI*VSAEIV
Trigger: CACAATTTCTGCAGAAACCCAGATGCGGACGAAAAG...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATCCTGGGGCATGGAGATaGTCAGAGGCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADPGAWR*SEAART
Trigger: AGTCCTCGCTGCCTCTGACCATCTCCATGCCCCAGG...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAGCCCCACCACAGAAGTaGCCCTGGGGCATGGAGATG +
Preference number: 4 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTAPPQK*PWGMEM
Trigger: CATCTCCATGCCCCAGGGCCACTTCTGTGGTGGGGC...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCCACCTTTAGATGTCTaGTTTTTATGTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRPPLDV*FLCRCS
Trigger: ACTGCACCGACATAAAAACCAGACATCTAAAGGTGG...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGTTGGGTGTAGACCCCTaGCCTCTTCCCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGLGVDP*PLPTLQ
Trigger: CTGGAGTGTGGGAAGAGGCCAGGGGTCTACACCCAA...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGTACTGTGTGGTCCCCTaGAGGCTCTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGYCVVP*RLWRCP
Trigger: TGGACACCTCCAGAGCCTCCAGGGGACCACACAGTA...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGTGGAGATCATCAGAGTaGGGAGGTGAACCCAGATGC +
Preference number: 4 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGWRSSE*GGEPRC
Trigger: GCATCTGGGTTCACCTCCCCACTCTGATGATCTCCA...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 72 bp TGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATaGTGCAAATGCTGGTCTGGGAAGGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WVTKGGRRSLVI*CKCWSGKAQAG
Trigger: CCCAGCCTGGGCCTTCCCAGACCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCACCAGGCAGCTGCATGTaGAGGTGCTCCCATGGACGA +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPPGSCM*RCSHGR
Trigger: TCGTCCATGGGAGCACCTTCACATGCAGCTGCCTGG...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGTTCTCATTCCTGCCTTaGAGGCCCTTTTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGFSFLP*RPFFLG
Trigger: CCCCAAGAAAAAGGGCCTTCAAGGCAGGAATGAGAA...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCGAAGCCAGGTCTAAATaGGAGATTGGCTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLEARSK*EIGFAF
Trigger: GAAAGCAAAGCCAATCTCTCATTTAGACCTGGCTTC...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCCTGGCAAACATCTTTaGAGTTTAAGGACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRPGKHL*SLRTCV
Trigger: AACACAAGTCCTTAAACTGCAAAGATGTTTGCCAGG...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351270.4
CDS-3UTR GCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTTCTGCATTTGCAGGATaGCTGTGGTGGAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATSAFAG*LWWRQS
Trigger: AGACTGCCTCCACCACAGGCATCCTGCAAATGCAGA...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTCCAGGCTGTGCTGACTaGTTGCTCGTTACATTCGCA +
Preference number: 4 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATPGCAD*LLVTFA
Trigger: TGCGAATGTAACGAGCAAGCAGTCAGCACAGCCTGG...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGATTAACAGCAGAACATaGAGATCAGACATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQINSRT*RSDILA
Trigger: TGCCAGGATGTCTGATCTCCATGTTCTGCTGTTAAT...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351270.4
CDS-3UTR CCA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGAGTGGGGCTTTCCTCTaGGTAGGCAACGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWSGAFL*VGNVLG
Trigger: GCCCAGGACGTTGCCTACCCAGAGGAAAGCCCCACT...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGTCTTTCTTCAGGTCCTaGTCCCCTAGCACCACCTTT +
Preference number: 4 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGSFFRS*SPSTTF
Trigger: AAAGGTGGTGCTAGGGGACCAGGACCTGAAGAAAGA...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCACCTCCAGAGTCACCCTaGCAGGTGTCTTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPPPESP*QVSCPG
Trigger: ACCTGGGCAAGACACCTGCCAGGGTGACTCTGGAGG...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACATTCGGCAAGCTGGAATaGCCCACCAGCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTFGKLE*PTSPSQ
Trigger: CTGGGATGGGCTGGTGGGCCATTCCAGCTTGCCGAA...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGTTCGGCAAGCTGGAATaGCCCACCAGCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWFGKLE*PTSPSQ
Trigger: CTGGGATGGGCTGGTGGGCCATTCCAGCTTGCCGAA...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCCACATGGGTTGTCCTTaGACGTATTTTGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLHMGCP*TYFALS
Trigger: AGAAAGTGCAAAATACGTGCAAGGACAACCCATGTG...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTCACATGGGTTGTCCTTaGACGTATTTTGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSHMGCP*TYFALS
Trigger: AGAAAGTGCAAAATACGTGCAAGGACAACCCATGTG...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGTTGGATCTCCGCTTATaGCGGGAGCAGGTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWLDLRL*REQVAP
Trigger: TGGGGCTACCTGCTCCCGGCATAAGCGGAGATCCAA...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATCGTGTTCACAGGGGTTaGGCTGGCATGGATCAGCTT +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADRVHRG*AGMDQL
Trigger: AAGCTGATCCATGCCAGCCCAACCCCTGTGAACACG...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATTGGGTAATGAGACATTaGCCCCGGCCACATGGGTTG +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADWVMRH*PRPHGL
Trigger: CAACCCATGTGGCCGGGGCCAATGTCTCATTACCCA...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATTTTATGTCGGTGCAGTaGGCAGCAGTGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADFMSVQ*AAVSTQ
Trigger: CTGGGTGCTCACTGCTGCCCACTGCACCGACATAAA...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCCCAGGCAGCTGCATGTaGAGGTGCTCCCATGGACGA +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASPGSCM*RCSHGR
Trigger: TCGTCCATGGGAGCACCTTCACATGCAGCTGCCTGG...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCGTATTTTGCACTTTCTaGCACTTATTCCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVVFCTF*HLFPEK
Trigger: TTTCTCTGGGAATAAGTGTCAGAAAGTGCAAAATAC...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGGGCACGCATGCTGGTTaGCTGTCCTATTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGGTHAG*LSYSFS
Trigger: GGAAAATGAATAGGACAGTCAACCAGCATGCGTGCC...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGAGTCTCTGTGAACACTaGTTTTCTAGAAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: SAEANLPGLHQSRARAAQSLCEH*FSRRYN
Trigger: ATTGTACCTTCTAGAAAATCAGTGTTCACAGAGACT...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGCATAGACGTAGTAGGTaGCGTCCTTCTCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGHRRSR*RPSHRS
Trigger: TGACCTGTGAGAAGGACGGCACCTACTACGTCTATG...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGGTGATATTGTGCAAATaGTGGTCTGGGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGVILCK*WSGKAQ
Trigger: CTGGGCCTTCCCAGACCAGCATTTGCACAATATCAC...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCCTGGATATGACAGTCTaGATTTTGAACCCTACTTTG +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLLDMTV*ILNPTL
Trigger: CAAAGTAGGGTTCAAAATGCAGACTGTCATATCCAG...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACACCACTTGGGAGCAGCTaGGACCTGTGTAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTPLGSS*DLCKGV
Trigger: AACACCCTTACACAGGTCCCAGCTGCTCCCAAGTGG...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGATATTGTGCAAATGCTaGTCTGGGAAGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGILCKC*SGKAQA
Trigger: AGCCTGGGCCTTCCCAGACCAGCATTTGCACAATAT...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATTTGATTTCGGCAAGCTaGAATGGCCCACCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADLISAS*NGPPAH
Trigger: ATGGGCTGGTGGGCCATTCCAGCTTGCCGAAATCAA...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 72 bp GGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTaGATTTCGGCAAGCTGGAATGGCCCACCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GSLFTRDRLQMA*ISASWNGPPAH
Trigger: ATGGGCTGGTGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGGATTCTAGAGCACAGTaGCCATCCACTGGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGDSRAQ*PSTGFN
Trigger: GTTAAAGCCAGTGGATGGTCACTGTGCTCTAGAATC...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATTGTTGGCAATCAGCTTaGCTTTGGCATCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADCWQSA*LWHPGA
Trigger: AGCTCCTGGATGCCAAAGTCAAGCTGATTGCCAACA...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGTCTTGCCCAGGTTTCTaGAGATTTCCTGCACAGATC +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGSCPGF*RFPAQI
Trigger: GATCTGTGCAGGAAATCTTCAGAAACCTGGGCAAGA...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCGATGGTGGTTCCCGCTaGTGCTGGGGATTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASDGGSR*CWGFWS
Trigger: ACTCCAGAATCCCCAGCATCAGCGGGAACCACCATC...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGGAACCCAGATGCCACTaGGATTCTGCACGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGEPRCH*DSARQK
Trigger: TTTTTGACGTGCAGAATCTCAGTGGCATCTGGGTTC...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATTTCTCATTCCTGCCTTaGAGGCCCTTTTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADFSFLP*RPFFLG
Trigger: CCCCAAGAAAAAGGGCCTTCAAGGCAGGAATGAGAA...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAATTCTGGCAGGGGTTTaGCCTGCATACAGGAACCAC +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPILAGV*PAYRNH
Trigger: GTGGTTCCTGTATGCAGGCCAAACCCCTGCCAGAAT...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAAATTTCCCCTTGAACTaGTCGGGACAGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPNFPLN*SGQAQV
Trigger: CACCTGTGCCTGTCCCGACCAGTTCAAGGGGAAATT...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCCCACAGAAGTGGCCCTaGGGCATGGAGATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASPQKWP*GMEMVR
Trigger: TCTGACCATCTCCATGCCCCAGGGCCACTTCTGTGG...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTTGGGTGTAGACCCCTaGCCTCTTCCCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASLGVDP*PLPTLQ
Trigger: CTGGAGTGTGGGAAGAGGCCAGGGGTCTACACCCAA...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGGATTCCATCATTCCTTaGGTTACCAAGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGDSIIP*VTKGGR
Trigger: TCTGCCTCCCTTGGTAACCCAAGGAATGATGGAATC...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCAGAATGTTGTATTTGTaGTCCTCTCTGATACCTAGA +
Preference number: 4 (lower is better)
Translates to: SIVGHEASRCQGAKESGLRMLYL*SSLIPR
Trigger: TCTAGGTATCAGAGAGGACCACAAATACAACATTCT...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGTTGATTTCGGCAAGCTaGAATGGCCCACCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWLISAS*NGPPAH
Trigger: ATGGGCTGGTGGGCCATTCCAGCTTGCCGAAATCAA...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGCCCCGGAAGCTTGGTTaGTGGCTCAGTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILPRKLG*WLSGAF
Trigger: GAAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGG...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCCACTGGCTTTAACTTaGGCAATGCAATATCATTGT +
Preference number: 4 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGPLALT*AMQYHC
Trigger: ACAATGATATTGCATTGCTCAAGTTAAAGCCAGTGG...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCAGAAGAAGCCTGGTaGTATTGTGCAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADAEEAW*YCANAG
Trigger: ACCAGCATTTGCACAATATCACCAGGCTTCTTCTGC...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAGGTGAGCCTGTTAAATaGTCCCTGTGCTTCTTAGCG +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPGEPVK*SLCFLA
Trigger: CGCTAAGAAGCACAGGGAGCATTTAACAGGCTCACC...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTGGAGATCAGACATCCTaGCAAACATCTTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATGDQTS*QTSLQF
Trigger: AAACTGCAAAGATGTTTGCCAGGATGTCTGATCTCC...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351270.4
CDS-3UTR CCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCATCAGGATTCTCAGCGTaGGTAAGTGTGCTACTGGTG +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPSGFSA*VSVLLV
Trigger: CACCAGTAGCACACTTACCCACGCTGAGAATCCTGA...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTTGGCCCCGGCCACATaGGTTGTCCTTGCACGTATT +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASLAPAT*VVLARI
Trigger: AATACGTGCAAGGACAACCCATGTGGCCGGGGCCAA...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCCCACTTGGGAGCAGCTaGGACCTGTGTAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASPLGSS*DLCKGV
Trigger: AACACCCTTACACAGGTCCCAGCTGCTCCCAAGTGG...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCCATACAGGAACCACTTaGGAGCAGCTGGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASHTGTT*EQLGPV
Trigger: CACAGGTCCCAGCTGCTCCCAAGTGGTTCCTGTATG...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGCCTGGGGCATGGAGATaGTCAGAGGCAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILPGAWR*SEAART
Trigger: AGTCCTCGCTGCCTCTGACCATCTCCATGCCCCAGG...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTTTATGTCGGTGCAGTaGGCAGCAGTGAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASFMSVQ*AAVSTQ
Trigger: CTGGGTGCTCACTGCTGCCCACTGCACCGACATAAA...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGTGGTTGAGGAGGAGATaGGCAGACAGTGAAAAAGTA +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGWLRRR*ADSEKV
Trigger: TACTTTTTCACTGTCTGCCCATCTCCTCCTCAACCA...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542051.5
CDS-3UTR TCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCACTAATTTCATGGGTCTaGGATGACCAGGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPLISWV*DDQADD
Trigger: GTCATCTGCCTGGTCATCTCAGACCCATGAAATTAG...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGGGCAGGGGTTTGGCCTaGATACAGGAACCACTTGGG +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILGRGLA*IQEPLG
Trigger: CCCAAGTGGTTCCTGTATGCAGGCCAAACCCCTGCC...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAAGAGTTGGCGGGAGTTaGACAAAGTGTTGGCAATCA +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPRVGGS*TKCWQS
Trigger: TGATTGCCAACACTTTGTGCAACTCCCGCCAACTCT...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAAAAAGAAGAAGGCCCTaGTGTTGTGAGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPKRRRP*CCEPCP
Trigger: TGGACATGGCTCACAACAGCAGGGCCTTCTTCTTTT...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAGTTAAATGCTCCCTGTaGTTCTTAGCGTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FTRDRLQMALISASWNGPVKCSL*FLACPV
Trigger: CACAGGACACGCTAAGAAGCACAGGGAGCATTTAAC...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGTCACAGGGGTTGGGCTaGCATGGATCAGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILSQGLG*HGSAWS
Trigger: GGACCAAGCTGATCCATGCCAGCCCAACCCCTGTGA...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATCTTTTCGTCCGCATCTaGGTTTCTGCAGAAATTGTG +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADLFVRI*VSAEIV
Trigger: CACAATTTCTGCAGAAACCCAGATGCGGACGAAAAG...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAGATCATCAGAGTaGGGAGGTGAACCCAGATGC +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASWRSSE*GGEPRC
Trigger: GCATCTGGGTTCACCTCCCCACTCTGATGATCTCCA...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGAGCTCTAAAGAAGTGTaGAACGCAGCTCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWSSKEV*NAAQTR
Trigger: CCTTGTTTGAGCTGCGTTTCACACTTCTTTAGAGCT...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAAGCTCTAAAGAAGTGTaGAACGCAGCTCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTSSKEV*NAAQTR
Trigger: CCTTGTTTGAGCTGCGTTTCACACTTCTTTAGAGCT...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCGGTGAGCCTGTTAAATaGTCCCTGTGCTTCTTAGCG +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASGEPVK*SLCFLA
Trigger: CGCTAAGAAGCACAGGGAGCATTTAACAGGCTCACC...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCATATTGTGCAAATGCTaGTCTGGGAAGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASILCKC*SGKAQA
Trigger: AGCCTGGGCCTTCCCAGACCAGCATTTGCACAATAT...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCGAACCCAGATGCCACTaGGATTCTGCACGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASEPRCH*DSARQK
Trigger: TTTTTGACGTGCAGAATCTCAGTGGCATCTGGGTTC...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACATTGCTTTCTCATTCCTaGCTTGAAGGCCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTLLSHS*LEGPFS
Trigger: AGAAAAAGGGCCTTCAAGGCAGGAATGAGAAAGCAA...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACACCACCTTTAGATGTCTaGTTTTTATGTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTPPLDV*FLCRCS
Trigger: ACTGCACCGACATAAAAACCAGACATCTAAAGGTGG...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCATACCTAGACGTGGATaGCTGATTCTGTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASIPRRG*LILLSA
Trigger: GGCACTCAACAGAATCAGCCATCCACGTCTAGGTAT...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGAGAATGTTGTATTTGTaGTCCTCTCTGATACCTAGA +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGRMLYL*SSLIPR
Trigger: TCTAGGTATCAGAGAGGACCACAAATACAACATTCT...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGTATTTTGCACTTTCTaGCACTTATTCCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADVFCTF*HLFPEK
Trigger: TTTCTCTGGGAATAAGTGTCAGAAAGTGCAAAATAC...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATTTTCTGAAGATTTCCTaGACAGATCATACTGTCATC +
Preference number: 4 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADFLKIS*TDHTVI
Trigger: GATGACAGTATGATCTGTGCAGGAAATCTTCAGAAA...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGGTGATATTGTGCAAATaGTGGTCTGGGAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILVILCK*WSGKAQ
Trigger: CTGGGCCTTCCCAGACCAGCATTTGCACAATATCAC...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGTCTAGAAGGTACAATTaGGTAAGGAAAGCAAACATA +
Preference number: 4 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGSRRYN*VRKANI
Trigger: TATGTTTGCTTTCCTTACCCAATTGTACCTTCTAGA...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 72 bp AGGGTCAGGGACTCGCTGGATATGACAGTCTGCATTTaGAACCCTACTTTGTTCAGAAGAAAGAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RVRDSLDMTVCI*NPTLFRRKKPG
Trigger: ACCTGGCTTCTTTCTTCTGAACAAAGTAGGGTTCAAAATGCAGACTGTCATATCCAGCGAGTCCCTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGAGAGTTGGCGGGAGTTaGACAAAGTGTTGGCAATCA +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILRVGGS*TKCWQS
Trigger: TGATTGCCAACACTTTGTGCAACTCCCGCCAACTCT...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGGTTAAATGCTCCCTGTaGTTCTTAGCGTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILVKCSL*FLACPV
Trigger: CACAGGACACGCTAAGAAGCACAGGGAGCATTTAAC...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGGCTGTGCTGACTGCTTaGTCGTTACATTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILAVLTA*SLHSQK
Trigger: TTTCTGCGAATGTAACGAGCAAGCAGTCAGCACAGC...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCCATACTATGTTGTGTTaGTTCCATCATTCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASHTMLC*FHHSLG
Trigger: ACCCAAGGAATGATGGAATCAACACAACATAGTATG...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAAATGCAATATCATTGTaGGGAATCTCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTNAISL*GISSLS
Trigger: TGAAAGAGATGAGATTCCCCACAATGATATTGCATT...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCAGTCTCTGTGAACACTaGTTTTCTAGAAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASSLCEH*FSRRYN
Trigger: ATTGTACCTTCTAGAAAATCAGTGTTCACAGAGACT...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGTTGCTTTCTCATTCCTaGCTTGAAGGCCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILLLSHS*LEGPFS
Trigger: AGAAAAAGGGCCTTCAAGGCAGGAATGAGAAAGCAA...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGCAGTCTTCACGTATTTaGATTCTAGAGCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILQSSRI*ILEHSD
Trigger: GTCACTGTGCTCTAGAATCCAAATACGTGAAGACTG...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 72 bp AGAAGAAAGAAGCCAGGTCTAAATGAGAGATTGGCTTaGCTTTCTCATTCCTGCCTTGAAGGCCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRKKPGLNERLA*LSHSCLEGPFS
Trigger: AGAAAAAGGGCCTTCAAGGCAGGAATGAGAAAGCAAAGCCAATCTCTCATTTAGACCTGGCTTCTTTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGCCACTGGCTTTAACTTaGGCAATGCAATATCATTGT +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILPLALT*AMQYHC
Trigger: ACAATGATATTGCATTGCTCAAGTTAAAGCCAGTGG...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR TCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGCATACTATGTTGTGTTaGTTCCATCATTCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILHTMLC*FHHSLG
Trigger: ACCCAAGGAATGATGGAATCAACACAACATAGTATG...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCAATGCAATATCATTGTaGGGAATCTCATCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASNAISL*GISSLS
Trigger: TGAAAGAGATGAGATTCCCCACAATGATATTGCATT...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CCA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTCTAGAAGGTACAATTaGGTAAGGAAAGCAAACATA +
Preference number: 4 (lower is better)
Translates to: RGSLFTRDRLQMALISASSRRYN*VRKANI
Trigger: TATGTTTGCTTTCCTTACCCAATTGTACCTTCTAGA...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
3UTR CAA 72 bp AATAATAACTCTGAAAGCAGATGGAGAATGTTGTATTaGTGGTCCTCTCTGATACCTAGACGTGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: NNNSESRWRMLY*WSSLIPRRGWL
Trigger: CAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCTCCATCTGCTTTCAGAGTTATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR GCA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGTTTCTGAAGATTTCCTaGACAGATCATACTGTCATC +
Preference number: 4 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILFLKIS*TDHTVI
Trigger: GATGACAGTATGATCTGTGCAGGAAATCTTCAGAAA...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp GGTGGATCAGCGCCCCACCACAGAAGTGGCCCTGGGGCATGGAGATaGTCAGAGGCAGCGAGGACTGGAGGGACGCCTGCCATGGGTGCT +
Preference number: 5 (lower is better)
Translates to: GGSAPHHRSGPGAWR*SEAARTGGTPAMGA
Trigger: AGCACCCATGGCAGGCGTCCCTCCAGTCCTCGCTGCCTCTGACCATCTCCATGCCCCAGGGCCACTTCTGTGGTGGGGCGCTGATCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp CAGAAGTGGCCCTGGGGCATGGAGATGGTCAGAGGCAGCGAGGACTaGAGGGACGCCTGCCATGGGTGCTTGCCCGCCGTGCTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: QKWPWGMEMVRGSED*RDACHGCLPAVLLK
Trigger: CTTTAAGAGCACGGCGGGCAAGCACCCATGGCAGGCGTCCCTCCAGTCCTCGCTGCCTCTGACCATCTCCATGCCCCAGGGCCACTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCCTGCCATGGGTGCTaGCCCGCCGTGCTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: SAEANLPGLHQSRARAAQACHGC*PAVLLK
Trigger: CTTTAAGAGCACGGCGGGCAAGCACCCATGGCAGGC...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp CCTCCAAACCCCAGCCCTGTCGGCCTGCATTTGACACTTCCAATCTaGCTGGCGGGGCAAGCCCAGCAGACACTCTCGCTGGCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: PPNPSPVGLHLTLPI*LAGQAQQTLSLAGS
Trigger: ACTGCCTGCCAGCGAGAGTGTCTGCTGGGCTTGCCCCGCCAGCCAGATTGGAAGTGTCAAATGCAGGCCGACAGGGCTGGGGTTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGCAATCAGCTTGACTTaGGCATCCAGGAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRAISLT*ASRSWR
Trigger: CCGCCAGCTCCTGGATGCCAAAGTCAAGCTGATTGC...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCTGGAGGTGTCCATTGTaGGCCATGAGGCCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVWRCPL*AMRPPG
Trigger: ACCGGGAGGCCTCATGGCCAACAATGGACACCTCCA...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp CACTTCCAATCTGGCTGGCGGGGCAAGCCCAGCAGACACTCTCGCTaGCAGGCAGTAGGACAGCTGATGGATGGGCTCAGCCTGCATTGC +
Preference number: 5 (lower is better)
Translates to: HFQSGWRGKPSRHSR*QAVGQLMDGLSLHC
Trigger: GCAATGCAGGCTGAGCCCATCCATCAGCTGTCCTACTGCCTGCCAGCGAGAGTGTCTGCTGGGCTTGCCCCGCCAGCCAGATTGGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS-3UTR CAA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGCCCCGGCCACATGGGTaGTCCTTGCACGTATTTTGC +
Preference number: 5 (lower is better)
Translates to: SAEANLPGLHQSRARAAQPRPHG*SLHVFC
Trigger: GCAAAATACGTGCAAGGACAACCCATGTGGCCGGGG...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCATACAGGAACCACTaGGGAGCAGCTGGGACCTGT +
Preference number: 5 (lower is better)
Translates to: SAEANLPGLHQSRARAAQAYRNH*GAAGTC
Trigger: ACAGGTCCCAGCTGCTCCCAAGTGGTTCCTGTATGC...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGCATTCTGGCAGGGGTTaGGCCTGCATACAGGAACCA +
Preference number: 5 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRHSGRG*ACIQEP
Trigger: TGGTTCCTGTATGCAGGCCAAACCCCTGCCAGAATG...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCGCAATCAGCTTGACTTaGGCATCCAGGAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVAISLT*ASRSWR
Trigger: CCGCCAGCTCCTGGATGCCAAAGTCAAGCTGATTGC...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGGAGGTGTCCATTGTaGGCCATGAGGCCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: SIVGHEASRCQGAKESGLWRCPL*AMRPPG
Trigger: ACCGGGAGGCCTCATGGCCAACAATGGACACCTCCA...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp GCCCAGCAGACACTCTCGCTGGCAGGCAGTAGGACAGCTGATGGATaGGCTCAGCCTGCATTGCTGGGCAGAGCCAAGCCAGCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: AQQTLSLAGSRTADG*AQPALLGRAKPALK
Trigger: CTTCAAAGCTGGCTTGGCTCTGCCCAGCAATGCAGGCTGAGCCCATCCATCAGCTGTCCTACTGCCTGCCAGCGAGAGTGTCTGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS-3UTR CAA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTCTGGGTAATGAGACATaGGCCCCGGCCACATGGGTT +
Preference number: 5 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSLGNET*APATWV
Trigger: AACCCATGTGGCCGGGGCCAATGTCTCATTACCCAG...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTACCCCGGAAGCTTGGTaGATGGCTCAGTGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSTPEAW*MAQWGF
Trigger: AAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGGT...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGTTCTGGAGTCTGCATTaGCAGGATGCCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRFWSLH*QDACGG
Trigger: TCCACCACAGGCATCCTGCAAATGCAGACTCCAGAA...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCGGATGGCTGATTCTGTaGAGTGCCTCGAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: SIVGHEASRCQGAKESGLGWLIL*SASSVW
Trigger: CCAGACACTCGAGGCACTCAACAGAATCAGCCATCC...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGGCTGTGCTGACTGCTaGCTCGTTACATTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: SAEANLPGLHQSRARAAQGCADC*LVTFAE
Trigger: TTCTGCGAATGTAACGAGCAAGCAGTCAGCACAGCC...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS GCA 90 bp TTGAACTGGTCGGGACAGGCACAGGTGAACTTGGATCTCCGCTTATaGCGGGAGCAGGTAGCCCCATTCTGGCAGGGGTTTGGCCTGCAT +
Preference number: 5 (lower is better)
Translates to: LNWSGQAQVNLDLRL*REQVAPFWQGFGLH
Trigger: ATGCAGGCCAAACCCCTGCCAGAATGGGGCTACCTGCTCCCGGCATAAGCGGAGATCCAAGTTCACCTGTGCCTGTCCCGACCAGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS GCA 90 bp GCTGGGCAGAGCCAAGCCAGCTTTGAAGAGGCATTTCCACAGGCCTaGTGGCTGTCGTGGCACCTGCTGGGTCCAGGCTTTCCAATAAAG +
Preference number: 5 (lower is better)
Translates to: AGQSQASFEEAFPQA*WLSWHLLGPGFPIK
Trigger: CTTTATTGGAAAGCCTGGACCCAGCAGGTGCCACGACAGCCAGCAGGCCTGTGGAAATGCCTCTTCAAAGCTGGCTTGGCTCTGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 90 bp GTGAACTTGGATCTCCGCTTATGCCGGGAGCAGGTAGCCCCATTCTaGCAGGGGTTTGGCCTGCATACAGGAACCACTTGGGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VNLDLRLCREQVAPF*QGFGLHTGTTWEQL
Trigger: CAGCTGCTCCCAAGTGGTTCCTGTATGCAGGCCAAACCCCTGCCAGAATGGGGCTACCTGCTCCCGGCATAAGCGGAGATCCAAGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp TCTTTCCACAGGAGTCAAACCCCGGAAGCTTGGTTGATGGCTCAGTaGGGCTTTCCTCTGGGTAGGCAACGTCCTGGGCTGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SFHRSQTPEAWLMAQ*GFPLGRQRPGLSRL
Trigger: CAGCCTGCTCAGCCCAGGACGTTGCCTACCCAGAGGAAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGGTTTGACTCCTGTGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp CATGGAGATGGTCAGAGGCAGCGAGGACTGGAGGGACGCCTGCCATaGGTGCTTGCCCGCCGTGCTCTTAAAGCCTCCATAGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: HGDGQRQRGLEGRLP*VLARRALKASIDSL
Trigger: AAGAGAATCTATGGAGGCTTTAAGAGCACGGCGGGCAAGCACCCATGGCAGGCGTCCCTCCAGTCCTCGCTGCCTCTGACCATCTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTCCGTGTTCACAGGGGTaGGGCTGGCATGGATCAGCT +
Preference number: 5 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATPCSQG*GWHGSA
Trigger: AGCTGATCCATGCCAGCCCAACCCCTGTGAACACGG...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCGGGTTTCTGCAGAAATaGTGTTCCCCAATCCCATGG +
Preference number: 5 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVGFLQK*CSPIPW
Trigger: CCATGGGATTGGGGAACACAATTTCTGCAGAAACCC...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGGCTGGGTGGCAGTaGTCTCTGCTTAGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGQAGWQ*SLLRVG
Trigger: CCCTACTCTAAGCAGAGACAACTGCCACCCAGCCTG...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTTTCTGGAGTCTGCATTaGCAGGATGCCTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSFWSLH*QDACGG
Trigger: TCCACCACAGGCATCCTGCAAATGCAGACTCCAGAA...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGCCACATGGGTTGTCCTaGCACGTATTTTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: SAEANLPGLHQSRARAAQPHGLS*HVFCTF
Trigger: GAAAGTGCAAAATACGTGCAAGGACAACCCATGTGG...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCCCACATGGGTTGTCCTaGCACGTATTTTGCACTTTC +
Preference number: 5 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVPHGLS*HVFCTF
Trigger: GAAAGTGCAAAATACGTGCAAGGACAACCCATGTGG...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTCAGGCACAGGTGAACTaGGATCTCCGCTTATGCCGG +
Preference number: 5 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATQAQVN*DLRLCR
Trigger: CCGGCATAAGCGGAGATCCAAGTTCACCTGTGCCTG...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTCATGTGGTCATAGAGTaGGCGGGAGTTGCACAAAGT +
Preference number: 5 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSHVVIE*AGVAQS
Trigger: ACTTTGTGCAACTCCCGCCAACTCTATGACCACATG...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS TCA 90 bp CTTTCTGACACTTATTCCCAGAGAAAGGAGCCAGGCAGCTGCATGTaGAGGTGCTCCCATGGACGAGGCAGTCCCCACCGTGTTCACAGG +
Preference number: 5 (lower is better)
Translates to: LSDTYSQRKEPGSCM*RCSHGRGSPHRVHR
Trigger: CCTGTGAACACGGTGGGGACTGCCTCGTCCATGGGAGCACCTTCACATGCAGCTGCCTGGCTCCTTTCTCTGGGAATAAGTGTCAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS TCA 90 bp TGCTATCTCAGTCTTTCCACAGGAGTCAAACCCCGGAAGCTTGGTTaGTGGCTCAGTGGGGCTTTCCTCTGGGTAGGCAACGTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: CYLSLSTGVKPRKLG*WLSGAFLWVGNVLG
Trigger: GCCCAGGACGTTGCCTACCCAGAGGAAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGGTTTGACTCCTGTGGAAAGACTGAGATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCAGGCACGCATGCTGGTaGACTGTCCTATTCATTTTC +
Preference number: 5 (lower is better)
Translates to: SIVGHEASRCQGAKESGLRHACW*TVLFIF
Trigger: GAAAATGAATAGGACAGTCAACCAGCATGCGTGCCT...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTAGGCACGCATGCTGGTaGACTGTCCTATTCATTTTC +
Preference number: 5 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSRHACW*TVLFIF
Trigger: GAAAATGAATAGGACAGTCAACCAGCATGCGTGCCT...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGACCCCGGAAGCTTGGTaGATGGCTCAGTGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGTPEAW*MAQWGF
Trigger: AAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGGT...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGGCCTGCCATGGGTGCTaGCCCGCCGTGCTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWACHGC*PAVLLK
Trigger: CTTTAAGAGCACGGCGGGCAAGCACCCATGGCAGGC...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCGAGTTGCACAAAGTGTaGGCAATCAGCTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVELHKV*AISLTL
Trigger: CAAAGTCAAGCTGATTGCCAACACTTTGTGCAACTC...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTGGATGGCTGATTCTGTaGAGTGCCTCGAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATGWLIL*SASSVW
Trigger: CCAGACACTCGAGGCACTCAACAGAATCAGCCATCC...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS TCA 90 bp GGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTaGGGTCCAGAAGACAGTACCTTAGAAGCCACTTTCACTTTTGAT +
Preference number: 5 (lower is better)
Translates to: GHEASRCQGAKESGL*GPEDSTLEATFTFD
Trigger: ATCAAAAGTGAAAGTGGCTTCTAAGGTACTGTCTTCTGGACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGAGCAATGCAATATCATaGTGGGGAATCTCATCTCTT +
Preference number: 5 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRSNAIS*WGISSL
Trigger: AAGAGATGAGATTCCCCACAATGATATTGCATTGCT...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGGTCCACTGGCTTTAACTaGAGCAATGCAATATCATTG +
Preference number: 5 (lower is better)
Translates to: LQRQTYRGYINPGPGQPRSTGFN*SNAISL
Trigger: CAATGATATTGCATTGCTCAAGTTAAAGCCAGTGGA...CCTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTCAGGAATTTGGTAACTaGGGTGTAGACCCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATQEFGN*GVDPWP
Trigger: AGGCCAGGGGTCTACACCCAAGTTACCAAATTCCTG...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTGGCTGTGCTGACTGCTaGCTCGTTACATTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATGCADC*LVTFAE
Trigger: TTCTGCGAATGTAACGAGCAAGCAGTCAGCACAGCC...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGGCAGATGTGAACTGGTaGAGGAGGAGATGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGADVNW*RRRWAD
Trigger: GTCTGCCCATCTCCTCCTCAACCAGTTCACATCTGC...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542051.5
CDS-3UTR CAA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAGCATACAGGAACCACTaGGGAGCAGCTGGGACCTGT +
Preference number: 5 (lower is better)
Translates to: FTRDRLQMALISASWNGPAYRNH*GAAGTC
Trigger: ACAGGTCCCAGCTGCTCCCAAGTGGTTCCTGTATGC...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGCAGGCACAGGTGAACTaGGATCTCCGCTTATGCCGG +
Preference number: 5 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWQAQVN*DLRLCR
Trigger: CCGGCATAAGCGGAGATCCAAGTTCACCTGTGCCTG...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGCAGGAATTTGGTAACTaGGGTGTAGACCCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGQEFGN*GVDPWP
Trigger: AGGCCAGGGGTCTACACCCAAGTTACCAAATTCCTG...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGCAGCCCAGCTTTTGATGGTGGCTTaGATCCAATTCAGGAATTTG +
Preference number: 5 (lower is better)
Translates to: SAEANLPGLHQSRARAAQLLMVA*IQFRNL
Trigger: CAAATTCCTGAATTGGATCAAAGCCACCATCAAAAG...CTGGGCTGCCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACACAGGCTGGGTGGCAGTaGTCTCTGCTTAGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTQAGWQ*SLLRVG
Trigger: CCCTACTCTAAGCAGAGACAACTGCCACCCAGCCTG...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATGCTGGGGGCCAGAGAGGAAGTTaGTTCACCAGAGACAGGCTT +
Preference number: 5 (lower is better)
Translates to: RVSGLRNKDVMVVPADAGGQRGS*FTRDRL
Trigger: AAGCCTGTCTCTGGTGAACAAACTTCCTCTCTGGCC...CCCAGCATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGAGGTCATGACAGTCTGCATTTaGAACCCTACTTTGTTCAGA +
Preference number: 5 (lower is better)
Translates to: LAMRPPGVRVPRRVGSEVMTVCI*NPTLFR
Trigger: TCTGAACAAAGTAGGGTTCAAAATGCAGACTGTCAT...GACCTCAGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCCCGTGTTCACAGGGGTaGGGCTGGCATGGATCAGCT +
Preference number: 5 (lower is better)
Translates to: RGSLFTRDRLQMALISASPCSQG*GWHGSA
Trigger: AGCTGATCCATGCCAGCCCAACCCCTGTGAACACGG...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCTGTCCTTGCACGTATTTaGCACTTTCTGACACTTATT +
Preference number: 5 (lower is better)
Translates to: PLLAMRPPGVRVPRRVGSVLARI*HFLTLI
Trigger: AATAAGTGTCAGAAAGTGCAAAATACGTGCAAGGAC...AGAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGCATTCTGGCAGGGGTTaGGCCTGCATACAGGAACCA +
Preference number: 5 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWHSGRG*ACIQEP
Trigger: TGGTTCCTGTATGCAGGCCAAACCCCTGCCAGAATG...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATTCACAGAATTTCCCCTaGAACTGGTCGGGACAGGCA +
Preference number: 5 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADSQNFP*NWSGQA
Trigger: TGCCTGTCCCGACCAGTTCAAGGGGAAATTCTGTGA...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS TCA 90 bp CCTGCAAGAGGAGGTGGGAGTTCCAGTAAAGGCACGCATGCTGGTTaGCTGTCCTATTCATTTTCCCTCGGTAAGAGTAGCCATCGCCAA +
Preference number: 5 (lower is better)
Translates to: PARGGGSSSKGTHAG*LSYSFSLGKSSHRQ
Trigger: TTGGCGATGGCTACTCTTACCGAGGGAAAATGAATAGGACAGTCAACCAGCATGCGTGCCTTTACTGGAACTCCCACCTCCTCTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCACTGGCATGGATCAGCTaGGTCCTCAGTGTAGTACCA +
Preference number: 5 (lower is better)
Translates to: FTRDRLQMALISASWNGPLAWIS*VLSVVP
Trigger: TGGTACTACACTGAGGACCAAGCTGATCCATGCCAG...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCCTGGGTAATGAGACATaGGCCCCGGCCACATGGGTT +
Preference number: 5 (lower is better)
Translates to: RGSLFTRDRLQMALISASLGNET*APATWV
Trigger: AACCCATGTGGCCGGGGCCAATGTCTCATTACCCAG...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACATCACAGAATTTCCCCTaGAACTGGTCGGGACAGGCA +
Preference number: 5 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTSQNFP*NWSGQA
Trigger: TGCCTGTCCCGACCAGTTCAAGGGGAAATTCTGTGA...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TCCATTGTTGGCCATGAGGCCTCCCGGTGTCAGGGTGCCAAGGAGAGTGGGCTCATTTTGAACCCTACTTaGTTCAGAAGAAAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SIVGHEASRCQGAKESGLILNPT*FRRKKP
Trigger: TGGCTTCTTTCTTCTGAACAAAGTAGGGTTCAAAAT...GAGCCCACTCTCCTTGGCACCCTGACACCGGGAGGCCTCATGGCCAACAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS GCA 90 bp AACTCAGTCCATGTTTGGGGTCTCTCAGAAAATGCTCAGAGTTCCTaGGATGGGAGCTTTGCAGCTGCTCTGGTTAAGGAGCTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: NSVHVWGLSENAQSS*DGSFAAALVKELAR
Trigger: TCTGGCAAGCTCCTTAACCAGAGCAGCTGCAAAGCTCCCATCGCAGGAACTCTGAGCATTTTCTGAGAGACCCCAAACATGGACTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 90 bp GTAGTAGGGAGGACTCTGGGTAATGAGACATTGGCCCCGGCCACATaGGTTGTCCTTGCACGTATTTTGCACTTTCTGACACTTATTCCC +
Preference number: 5 (lower is better)
Translates to: VVGRTLGNETLAPAT*VVLARILHFLTLIP
Trigger: GGGAATAAGTGTCAGAAAGTGCAAAATACGTGCAAGGACAACCCATGTGGCCGGGGCCAATGTCTCATTACCCAGAGTCCTCCCTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp ATGGGAGCTTTGCAGCTGCTCTGGTTAAGGAGCTTGCCAGATGTGTaGAACAGAATCAAAATCCCCGGAATGTCGTCCCTGTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: MGALQLLWLRSLPDV*NRIKIPGMSSLLVS
Trigger: TGACACCAACAGGGACGACATTCCGGGGATTTTGATTCTGTTCCACACATCTGGCAAGCTCCTTAACCAGAGCAGCTGCAAAGCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 90 bp GCACATGCTCCAGGTCCCTTGACCAGGATTAACTCAGTCCATGTTTaGGGTCTCTCAGAAAATGCTCAGAGTTCCTGCGATGGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: AHAPGPLTRINSVHV*GLSENAQSSCDGSF
Trigger: AAAGCTCCCATCGCAGGAACTCTGAGCATTTTCTGAGAGACCCCAAACATGGACTGAGTTAATCCTGGTCAAGGGACCTGGAGCATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS-3UTR CAA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACAGGGTTTCTGCAGAAATaGTGTTCCCCAATCCCATGG +
Preference number: 5 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTGFLQK*CSPIPW
Trigger: CCATGGGATTGGGGAACACAATTTCTGCAGAAACCC...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCATTAGTTCTGCAGAGGCAAACCTACCGGGGCTACATCAATCCCGGGCCAGGGAGCAATGCAATATCATaGTGGGGAATCTCATCTCTT +
Preference number: 5 (lower is better)
Translates to: PLVLQRQTYRGYINPGPGSNAIS*WGISSL
Trigger: AAGAGATGAGATTCCCCACAATGATATTGCATTGCT...CCCTGGCCCGGGATTGATGTAGCCCCGGTAGGTTTGCCTCTGCAGAACTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCACATGTGGTCATAGAGTaGGCGGGAGTTGCACAAAGT +
Preference number: 5 (lower is better)
Translates to: FTRDRLQMALISASWNGPHVVIE*AGVAQS
Trigger: ACTTTGTGCAACTCCCGCCAACTCTATGACCACATG...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp CAGAAAATGCTCAGAGTTCCTGCGATGGGAGCTTTGCAGCTGCTCTaGTTAAGGAGCTTGCCAGATGTGTGGAACAGAATCAAAATCCCC +
Preference number: 5 (lower is better)
Translates to: QKMLRVPAMGALQLL*LRSLPDVWNRIKIP
Trigger: GGGGATTTTGATTCTGTTCCACACATCTGGCAAGCTCCTTAACCAGAGCAGCTGCAAAGCTCCCATCGCAGGAACTCTGAGCATTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS-3UTR CAA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCCTGGCATGGATCAGCTaGGTCCTCAGTGTAGTACCA +
Preference number: 5 (lower is better)
Translates to: RGSLFTRDRLQMALISASLAWIS*VLSVVP
Trigger: TGGTACTACACTGAGGACCAAGCTGATCCATGCCAG...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGCCCCGGCCACATGGGTaGTCCTTGCACGTATTTTGC +
Preference number: 5 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILPRPHG*SLHVFC
Trigger: GCAAAATACGTGCAAGGACAACCCATGTGGCCGGGG...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTCTTTTGATGGTGGCTTaGATCCAATTCAGGAATTTG +
Preference number: 5 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATLLMVA*IQFRNL
Trigger: CAAATTCCTGAATTGGATCAAAGCCACCATCAAAAG...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GAAGCAGTGGAGGCTGGAGATCATCAGAGTGGGGAGGTGAACCCAGATGCCACTACATACTATGTTGTGTaGATTCCATCATTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: EAVEAGDHQSGEVNPDATTYYVV*IPSFLG
Trigger: CCCAAGGAATGATGGAATCAACACAACATAGTATGT...AGTGGCATCTGGGTTCACCTCCCCACTCTGATGATCTCCAGCCTCCACTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAAGGCTTCAGATGGCTTaGATTTCGGCAAGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: FTRDRLQMALISASWNGPRLQMA*ISASWN
Trigger: ATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCT...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS GCA 90 bp AGAGTCACCCTGGCAGGTGTCTTGCCCAGGTTTCTGAAGATTTCCTaGACAGATCATACTGTCATCAATCATGTGGTCATAGAGTTGGCG +
Preference number: 5 (lower is better)
Translates to: RVTLAGVLPRFLKIS*TDHTVINHVVIELA
Trigger: CGCCAACTCTATGACCACATGATTGATGACAGTATGATCTGTGCAGGAAATCTTCAGAAACCTGGGCAAGACACCTGCCAGGGTGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATTGGAGAATGTTGTATTaGTGGTCCTCTCTGATACCT +
Preference number: 5 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADWRMLY*WSSLIP
Trigger: AGGTATCAGAGAGGACCACAAATACAACATTCTCCA...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp TTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCTGGAATGGCCCAAGCAGATGGAGAATGTaGTATTTGTGGTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FTRDRLQMALISASWNGPSRWRM*YLWSSL
Trigger: CAGAGAGGACCACAAATACAACATTCTCCATCTGCT...TGGGCCATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GACTGCTTGCTCGTTACATTCGCAGAAAGGGTCAGGGACTCGCTGGATATGACATGGAGAATGTTGTATTaGTGGTCCTCTCTGATACCT +
Preference number: 5 (lower is better)
Translates to: DCLLVTFAERVRDSLDMTWRMLY*WSSLIP
Trigger: AGGTATCAGAGAGGACCACAAATACAACATTCTCCA...TGTCATATCCAGCGAGTCCCTGACCCTTTCTGCGAATGTAACGAGCAAGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCAGGCTTCAGATGGCTTaGATTTCGGCAAGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: RGSLFTRDRLQMALISASRLQMA*ISASWN
Trigger: ATTCCAGCTTGCCGAAATCAAAGCCATCTGAAGCCT...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGTCCACTGGCTTTAACTaGAGCAATGCAATATCATTG +
Preference number: 5 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWSTGFN*SNAISL
Trigger: CAATGATATTGCATTGCTCAAGTTAAAGCCAGTGGA...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp AGAGGAAGTTTGTTCACCAGAGACAGGCTTCAGATGGCTTTGATTTCGGCAAGCGAGTTGCACAAAGTGTaGGCAATCAGCTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: RGSLFTRDRLQMALISASELHKV*AISLTL
Trigger: CAAAGTCAAGCTGATTGCCAACACTTTGTGCAACTC...GCTTGCCGAAATCAAAGCCATCTGAAGCCTGTCTCTGGTGAACAAACTTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp GTGCCTCGAGTGTCTGGGCTGAGGAATAAAGATGTGATGGTGGTTCCCGCTGATATTTTGAACCCTACTTaGTTCAGAAGAAAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: VPRVSGLRNKDVMVVPADILNPT*FRRKKP
Trigger: TGGCTTCTTTCTTCTGAACAAAGTAGGGTTCAAAAT...ATCAGCGGGAACCACCATCACATCTTTATTCCTCAGCCCAGACACTCGAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp CCTTGGGTTACCAAGGGAGGCAGAAGAAGCCTGGTGATATTGTGCAAATGCTGGATGACAGTCTGCATTTaGAACCCTACTTTGTTCAGA +
Preference number: 5 (lower is better)
Translates to: PWVTKGGRRSLVILCKCWMTVCI*NPTLFR
Trigger: TCTGAACAAAGTAGGGTTCAAAATGCAGACTGTCAT...CCAGCATTTGCACAATATCACCAGGCTTCTTCTGCCTCCCTTGGTAACCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS-3UTR CAA 90 bp AGAATGTTGTATTTGTGGTCCTCTCTGATACCTAGACGTGGATGGCTGATTCTGAGCAGATGGAGAATGTaGTATTTGTGGTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: RMLYLWSSLIPRRGWLILSRWRM*YLWSSL
Trigger: CAGAGAGGACCACAAATACAACATTCTCCATCTGCT...CAGAATCAGCCATCCACGTCTAGGTATCAGAGAGGACCACAAATACAACATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 90 bp TTCCCACCAGAGCCATTAACAGCAGAACATGGAGATCAGACATCCTaGCAAACATCTTTGCAGTTTAAGGACTTGTGTTTTCCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: FPPEPLTAEHGDQTS*QTSLQFKDLCFPLN
Trigger: ATTGAGAGGAAAACACAAGTCCTTAAACTGCAAAGATGTTTGCCAGGATGTCTGATCTCCATGTTCTGCTGTTAATGGCTCTGGTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351270.4
CDS TCA 72 bp GGCCTCCTCCAAACCCCAGCCCTGTCGGCCTGCATTTaGCACTTCCAATCTGGCTGGCGGGGCAAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: GLLQTPALSACI*HFQSGWRGKPS
Trigger: GCTGGGCTTGCCCCGCCAGCCAGATTGGAAGTGTCAAATGCAGGCCGACAGGGCTGGGGTTTGGAGGAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 72 bp TCTGGCTGGCGGGGCAAGCCCAGCAGACACTCTCGCTaGCAGGCAGTAGGACAGCTGATGGATGGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SGWRGKPSRHSR*QAVGQLMDGLS
Trigger: GCTGAGCCCATCCATCAGCTGTCCTACTGCCTGCCAGCGAGAGTGTCTGCTGGGCTTGCCCCGCCAGCCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 72 bp GGTCAGAGGCAGCGAGGACTGGAGGGACGCCTGCCATaGGTGCTTGCCCGCCGTGCTCTTAAAGCCTCCATA +
Preference number: 6 (lower is better)
Translates to: GQRQRGLEGRLP*VLARRALKASI
Trigger: TATGGAGGCTTTAAGAGCACGGCGGGCAAGCACCCATGGCAGGCGTCCCTCCAGTCCTCGCTGCCTCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 72 bp CCCAGCCCTGTCGGCCTGCATTTGACACTTCCAATCTaGCTGGCGGGGCAAGCCCAGCAGACACTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: PSPVGLHLTLPI*LAGQAQQTLSL
Trigger: CAGCGAGAGTGTCTGCTGGGCTTGCCCCGCCAGCCAGATTGGAAGTGTCAAATGCAGGCCGACAGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 72 bp ATGCCGGGAGCAGGTAGCCCCATTCTGGCAGGGGTTTaGCCTGCATACAGGAACCACTTGGGAGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: MPGAGSPILAGV*PAYRNHLGAAG
Trigger: CCCAGCTGCTCCCAAGTGGTTCCTGTATGCAGGCCAAACCCCTGCCAGAATGGGGCTACCTGCTCCCGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS GCA 72 bp TCGGGACAGGCACAGGTGAACTTGGATCTCCGCTTATaGCGGGAGCAGGTAGCCCCATTCTGGCAGGGGTTT +
Preference number: 6 (lower is better)
Translates to: SGQAQVNLDLRL*REQVAPFWQGF
Trigger: AAACCCCTGCCAGAATGGGGCTACCTGCTCCCGGCATAAGCGGAGATCCAAGTTCACCTGTGCCTGTCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 72 bp CATGGACGAGGCAGTCCCCACCGTGTTCACAGGGGTTaGGCTGGCATGGATCAGCTTGGTCCTCAGTGTAGT +
Preference number: 6 (lower is better)
Translates to: HGRGSPHRVHRG*AGMDQLGPQCS
Trigger: ACTACACTGAGGACCAAGCTGATCCATGCCAGCCCAACCCCTGTGAACACGGTGGGGACTGCCTCGTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 72 bp GATCTCCGCTTATGCCGGGAGCAGGTAGCCCCATTCTaGCAGGGGTTTGGCCTGCATACAGGAACCACTTGG +
Preference number: 6 (lower is better)
Translates to: DLRLCREQVAPF*QGFGLHTGTTW
Trigger: CCAAGTGGTTCCTGTATGCAGGCCAAACCCCTGCCAGAATGGGGCTACCTGCTCCCGGCATAAGCGGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 72 bp AGGAGTCAAACCCCGGAAGCTTGGTTGATGGCTCAGTaGGGCTTTCCTCTGGGTAGGCAACGTCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RSQTPEAWLMAQ*GFPLGRQRPGL
Trigger: CAGCCCAGGACGTTGCCTACCCAGAGGAAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGGTTTGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 72 bp CAAGCCAGCTTTGAAGAGGCATTTCCACAGGCCTGCTaGCTGTCGTGGCACCTGCTGGGTCCAGGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: QASFEEAFPQAC*LSWHLLGPGFP
Trigger: TGGAAAGCCTGGACCCAGCAGGTGCCACGACAGCCAGCAGGCCTGTGGAAATGCCTCTTCAAAGCTGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CAA 72 bp TTCCCCTTGAACTGGTCGGGACAGGCACAGGTGAACTaGGATCTCCGCTTATGCCGGGAGCAGGTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: FPLNWSGQAQVN*DLRLCREQVAP
Trigger: TGGGGCTACCTGCTCCCGGCATAAGCGGAGATCCAAGTTCACCTGTGCCTGTCCCGACCAGTTCAAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 72 bp GCTCAGCCTGCATTGCTGGGCAGAGCCAAGCCAGCTTaGAAGAGGCATTTCCACAGGCCTGCTGGCTGTCGT +
Preference number: 6 (lower is better)
Translates to: AQPALLGRAKPA*KRHFHRPAGCR
Trigger: ACGACAGCCAGCAGGCCTGTGGAAATGCCTCTTCAAAGCTGGCTTGGCTCTGCCCAGCAATGCAGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CAA 90 bp TCACAGAATTTCCCCTTGAACTGGTCGGGACAGGCACAGGTGAACTaGGATCTCCGCTTATGCCGGGAGCAGGTAGCCCCATTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SQNFPLNWSGQAQVN*DLRLCREQVAPFWQ
Trigger: CTGCCAGAATGGGGCTACCTGCTCCCGGCATAAGCGGAGATCCAAGTTCACCTGTGCCTGTCCCGACCAGTTCAAGGGGAAATTCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 90 bp CTGCTATCTCAGTCTTTCCACAGGAGTCAAACCCCGGAAGCTTGGTaGATGGCTCAGTGGGGCTTTCCTCTGGGTAGGCAACGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: LLSQSFHRSQTPEAW*MAQWGFPLGRQRPG
Trigger: CCCAGGACGTTGCCTACCCAGAGGAAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGGTTTGACTCCTGTGGAAAGACTGAGATAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 90 bp CCAGATGTGTGGAACAGAATCAAAATCCCCGGAATGTCGTCCCTGTaGGTGTCATCCATCACTGTGGCACAGACGGCTCCTCTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: PDVWNRIKIPGMSSL*VSSITVAQTAPLRA
Trigger: GGCCCTCAGAGGAGCCGTCTGTGCCACAGTGATGGATGACACCAACAGGGACGACATTCCGGGGATTTTGATTCTGTTCCACACATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS TCA 72 bp AGTCTTTCCACAGGAGTCAAACCCCGGAAGCTTGGTTaGTGGCTCAGTGGGGCTTTCCTCTGGGTAGGCAAC +
Preference number: 6 (lower is better)
Translates to: SLSTGVKPRKLG*WLSGAFLWVGN
Trigger: GTTGCCTACCCAGAGGAAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGGTTTGACTCCTGTGGAAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 72 bp ACAGCGGTAGTAGGGAGGACTCTGGGTAATGAGACATaGGCCCCGGCCACATGGGTTGTCCTTGCACGTATT +
Preference number: 6 (lower is better)
Translates to: TAVVGRTLGNET*APATWVVLARI
Trigger: AATACGTGCAAGGACAACCCATGTGGCCGGGGCCAATGTCTCATTACCCAGAGTCCTCCCTACTACCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 72 bp CAGTCTTTCCACAGGAGTCAAACCCCGGAAGCTTGGTaGATGGCTCAGTGGGGCTTTCCTCTGGGTAGGCAA +
Preference number: 6 (lower is better)
Translates to: QSFHRSQTPEAW*MAQWGFPLGRQ
Trigger: TTGCCTACCCAGAGGAAAGCCCCACTGAGCCATCAACCAAGCTTCCGGGGTTTGACTCCTGTGGAAAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 72 bp GGAACAGAATCAAAATCCCCGGAATGTCGTCCCTGTTaGTGTCATCCATCACTGTGGCACAGACGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GTESKSPECRPC*CHPSLWHRRLL
Trigger: GAGGAGCCGTCTGTGCCACAGTGATGGATGACACCAACAGGGACGACATTCCGGGGATTTTGATTCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 72 bp CTCAGAGTTCCTGCGATGGGAGCTTTGCAGCTGCTCTaGTTAAGGAGCTTGCCAGATGTGTGGAACAGAATC +
Preference number: 6 (lower is better)
Translates to: LRVPAMGALQLL*LRSLPDVWNRI
Trigger: GATTCTGTTCCACACATCTGGCAAGCTCCTTAACCAGAGCAGCTGCAAAGCTCCCATCGCAGGAACTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CAA 72 bp TGGAACAGAATCAAAATCCCCGGAATGTCGTCCCTGTaGGTGTCATCCATCACTGTGGCACAGACGGCTCCT +
Preference number: 6 (lower is better)
Translates to: WNRIKIPGMSSL*VSSITVAQTAP
Trigger: AGGAGCCGTCTGTGCCACAGTGATGGATGACACCAACAGGGACGACATTCCGGGGATTTTGATTCTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CAA 72 bp GCGATGGGAGCTTTGCAGCTGCTCTGGTTAAGGAGCTaGCCAGATGTGTGGAACAGAATCAAAATCCCCGGA +
Preference number: 6 (lower is better)
Translates to: AMGALQLLWLRS*PDVWNRIKIPG
Trigger: TCCGGGGATTTTGATTCTGTTCCACACATCTGGCAAGCTCCTTAACCAGAGCAGCTGCAAAGCTCCCATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CAA 90 bp AGAGTTCCTGCGATGGGAGCTTTGCAGCTGCTCTGGTTAAGGAGCTaGCCAGATGTGTGGAACAGAATCAAAATCCCCGGAATGTCGTCC +
Preference number: 6 (lower is better)
Translates to: RVPAMGALQLLWLRS*PDVWNRIKIPGMSS
Trigger: GGACGACATTCCGGGGATTTTGATTCTGTTCCACACATCTGGCAAGCTCCTTAACCAGAGCAGCTGCAAAGCTCCCATCGCAGGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CAA 90 bp TTTACAGACACAGCGGTAGTAGGGAGGACTCTGGGTAATGAGACATaGGCCCCGGCCACATGGGTTGTCCTTGCACGTATTTTGCACTTT +
Preference number: 6 (lower is better)
Translates to: FTDTAVVGRTLGNET*APATWVVLARILHF
Trigger: AAAGTGCAAAATACGTGCAAGGACAACCCATGTGGCCGGGGCCAATGTCTCATTACCCAGAGTCCTCCCTACTACCGCTGTGTCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 90 bp TTTGGGGTCTCTCAGAAAATGCTCAGAGTTCCTGCGATGGGAGCTTaGCAGCTGCTCTGGTTAAGGAGCTTGCCAGATGTGTGGAACAGA +
Preference number: 6 (lower is better)
Translates to: FGVSQKMLRVPAMGA*QLLWLRSLPDVWNR
Trigger: TCTGTTCCACACATCTGGCAAGCTCCTTAACCAGAGCAGCTGCAAAGCTCCCATCGCAGGAACTCTGAGCATTTTCTGAGAGACCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS TCA 72 bp GGAGGTGGGAGTTCCAGTAAAGGCACGCATGCTGGTTaGCTGTCCTATTCATTTTCCCTCGGTAAGAGTAGC +
Preference number: 6 (lower is better)
Translates to: GGGSSSKGTHAG*LSYSFSLGKSS
Trigger: GCTACTCTTACCGAGGGAAAATGAATAGGACAGTCAACCAGCATGCGTGCCTTTACTGGAACTCCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS GCA 72 bp CATGTTTGGGGTCTCTCAGAAAATGCTCAGAGTTCCTaGGATGGGAGCTTTGCAGCTGCTCTGGTTAAGGAG +
Preference number: 6 (lower is better)
Translates to: HVWGLSENAQSS*DGSFAAALVKE
Trigger: CTCCTTAACCAGAGCAGCTGCAAAGCTCCCATCGCAGGAACTCTGAGCATTTTCTGAGAGACCCCAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 72 bp TTGCAGCTGCTCTGGTTAAGGAGCTTGCCAGATGTGTaGAACAGAATCAAAATCCCCGGAATGTCGTCCCTG +
Preference number: 6 (lower is better)
Translates to: LQLLWLRSLPDV*NRIKIPGMSSL
Trigger: CAGGGACGACATTCCGGGGATTTTGATTCTGTTCCACACATCTGGCAAGCTCCTTAACCAGAGCAGCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CAA 72 bp GATGGTGGCTTTGATCCAATTCAGGAATTTGGTAACTaGGGTGTAGACCCCTGGCCTCTTCCCACACTCCAG +
Preference number: 6 (lower is better)
Translates to: DGGFDPIQEFGN*GVDPWPLPTLQ
Trigger: CTGGAGTGTGGGAAGAGGCCAGGGGTCTACACCCAAGTTACCAAATTCCTGAATTGGATCAAAGCCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 72 bp TCTCAGAAAATGCTCAGAGTTCCTGCGATGGGAGCTTaGCAGCTGCTCTGGTTAAGGAGCTTGCCAGATGTG +
Preference number: 6 (lower is better)
Translates to: SQKMLRVPAMGA*QLLWLRSLPDV
Trigger: CACATCTGGCAAGCTCCTTAACCAGAGCAGCTGCAAAGCTCCCATCGCAGGAACTCTGAGCATTTTCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 72 bp TCATCAGAACCTATTTCACAGAATTTCCCCTTGAACTaGTCGGGACAGGCACAGGTGAACTTGGATCTCCGC +
Preference number: 6 (lower is better)
Translates to: SSEPISQNFPLN*SGQAQVNLDLR
Trigger: GCGGAGATCCAAGTTCACCTGTGCCTGTCCCGACCAGTTCAAGGGGAAATTCTGTGAAATAGGTTCTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 72 bp CCAGGTCCCTTGACCAGGATTAACTCAGTCCATGTTTaGGGTCTCTCAGAAAATGCTCAGAGTTCCTGCGAT +
Preference number: 6 (lower is better)
Translates to: PGPLTRINSVHV*GLSENAQSSCD
Trigger: ATCGCAGGAACTCTGAGCATTTTCTGAGAGACCCCAAACATGGACTGAGTTAATCCTGGTCAAGGGACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS TCA 72 bp TTGGGAAACCTTCTTAAGCACATGCTCCAGGTCCCTTaGCCAGGATTAACTCAGTCCATGTTTGGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LGNLLKHMLQVP*PGLTQSMFGVS
Trigger: AGAGACCCCAAACATGGACTGAGTTAATCCTGGTCAAGGGACCTGGAGCATGTGCTTAAGAAGGTTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460714.1
CDS CCA 72 bp AGGACCCATCAGGCAAGCACACAGTCTTCACGTATTTaGATTCTAGAGCACAGTGACCATCCACTGGCTTTA +
Preference number: 6 (lower is better)
Translates to: RTHQASTQSSRI*ILEHSDHPLAL
Trigger: TAAAGCCAGTGGATGGTCACTGTGCTCTAGAATCCAAATACGTGAAGACTGTGTGCTTGCCTGATGGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 90 bp GCTGAGCAGGCTGAGACATCACAGTATTCCCATTTCACCTTGTCATaGGTAACTTTAATAAAGCACCAGGGCTTTTCGTCCGCATCTGGG +
Preference number: 6 (lower is better)
Translates to: AEQAETSQYSHFTLS*VTLIKHQGFSSASG
Trigger: CCCAGATGCGGACGAAAAGCCCTGGTGCTTTATTAAAGTTACCAATGACAAGGTGAAATGGGAATACTGTGATGTCTCAGCCTGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CCA 72 bp GCTGTCTTTCCCACCAGAGCCATTAACAGCAGAACATaGAGATCAGACATCCTGGCAAACATCTTTGCAGTT +
Preference number: 6 (lower is better)
Translates to: AVFPTRAINSRT*RSDILANIFAV
Trigger: AACTGCAAAGATGTTTGCCAGGATGTCTGATCTCCATGTTCTGCTGTTAATGGCTCTGGTGGGAAAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351270.4
CDS CAA 90 bp ATTTCCTGCACAGATCATACTGTCATCAATCATGTGGTCATAGAGTaGGCGGGAGTTGCACAAAGTGTTGGCAATCAGCTTGACTTTGGC +
Preference number: 6 (lower is better)
Translates to: ISCTDHTVINHVVIE*AGVAQSVGNQLDFG
Trigger: GCCAAAGTCAAGCTGATTGCCAACACTTTGTGCAACTCCCGCCAACTCTATGACCACATGATTGATGACAGTATGATCTGTGCAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS GCA 72 bp CTGGCAGGTGTCTTGCCCAGGTTTCTGAAGATTTCCTaGACAGATCATACTGTCATCAATCATGTGGTCATA +
Preference number: 6 (lower is better)
Translates to: LAGVLPRFLKIS*TDHTVINHVVI
Trigger: TATGACCACATGATTGATGACAGTATGATCTGTGCAGGAAATCTTCAGAAACCTGGGCAAGACACCTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS CAA 72 bp ACAGATCATACTGTCATCAATCATGTGGTCATAGAGTaGGCGGGAGTTGCACAAAGTGTTGGCAATCAGCTT +
Preference number: 6 (lower is better)
Translates to: TDHTVINHVVIE*AGVAQSVGNQL
Trigger: AAGCTGATTGCCAACACTTTGTGCAACTCCCGCCAACTCTATGACCACATGATTGATGACAGTATGATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351270.4
ENST00000542051.5
CDS GCA 72 bp CAGAACATGGAGATCAGACATCCTGGCAAACATCTTTaGAGTTTAAGGACTTGTGTTTTCCTCTCAATAAAA +
Preference number: 6 (lower is better)
Translates to: QNMEIRHPGKHL*SLRTCVFLSIK
Trigger: TTTTATTGAGAGGAAAACACAAGTCCTTAAACTGCAAAGATGTTTGCCAGGATGTCTGATCTCCATGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351270.4