RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for H6PD (Homo sapiens)

Ensembl gene IDs: ENSG00000049239

Ensembl transcript IDs: ENST00000377403.7, ENST00000602477.1

Found 856 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCACACGGGTGCAGCCTCACGGGAGAGTTGCGGAGAGAGGGAATaGGTTCAGTTCAGCCAGCGGACGGCCAGGGGTAAGCGGCCCCTA +
Preference number: 1 (lower is better)
Translates to: THTGAASRESCGERE*VQFSQRTARGKRPL
Trigger: TAGGGGCCGCTTACCCCTGGCCGTCCGCTGGCTGAACTGAACGCATTCCCTCTCTCCGCAACTCTCCCGTGAGGCTGCACCCGTGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp GCCGCTTCCAGTGCTACCCACACGGGTGCAGCCTCACGGGAGAGTTaGGGAGAGAGGGAATGCGTTCAGTTCAGCCAGCGGACGGCCAGG +
Preference number: 1 (lower is better)
Translates to: AASSATHTGAASRES*GERECVQFSQRTAR
Trigger: CCTGGCCGTCCGCTGGCTGAACTGAACGCATTCCCTCTCTCCGCAACTCTCCCGTGAGGCTGCACCCGTGTGGGTAGCACTGGAAGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp GTAGAAGCTCAGATGCTGGGCGCCAGGAGGGCGGCTTCCTGGCTCTaGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTA +
Preference number: 1 (lower is better)
Translates to: VEAQMLGARRAASWL*APWFCPNEGRSLGV
Trigger: TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGAAGCCGCCCTCCTGGCGCCCAGCATCTGAGCTTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp TCACGTGTAGAAGCTCAGATGCTGGGCGCCAGGAGGGCGGCTTCCTaGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTG +
Preference number: 1 (lower is better)
Translates to: SRVEAQMLGARRAAS*LWAPWFCPNEGRSL
Trigger: CAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGAAGCCGCCCTCCTGGCGCCCAGCATCTGAGCTTCTACACGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 90 bp GTGGCTCTCATGCCCACACCTCTCCACCCAAGGGAACAGTCTCTCTaGTCCTCACCTGGCAGAAGCCCAGACCCTGAGTCCCTAGCGCGG +
Preference number: 1 (lower is better)
Translates to: VALMPTPLHPREQSL*SSPGRSPDPESLAR
Trigger: CCGCGCTAGGGACTCAGGGTCTGGGCTTCTGCCAGGTGAGGAGCAGAGAGACTGTTCCCTTGGGTGGAGAGGTGTGGGCATGAGAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp CCAGTGAGGCCTAGCTCCTGTCTGGTGGGAGCAGAGCCGCCTGGATaGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAG +
Preference number: 1 (lower is better)
Translates to: PVRPSSCLVGAEPPG*PSVTRCSISLPANE
Trigger: CTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCAGACAGGAGCTAGGCCTCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp CAGATGCTGGGCGCCAGGAGGGCGGCTTCCTGGCTCTGGGCACCGTaGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAAAAACAGAT +
Preference number: 1 (lower is better)
Translates to: QMLGARRAASWLWAP*FCPNEGRSLGVKTD
Trigger: ATCTGTTTTTACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGAAGCCGCCCTCCTGGCGCCCAGCATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp TCAAGGGCCGGCCTGCCCTTCATCCTGCAGGGGTACTTGGGCATGTaGAGGCCCCTTTCTCCCTGGTGTTGCAACTGGAGAGGAGTCGGT +
Preference number: 1 (lower is better)
Translates to: SRAGLPFILQGYLGM*RPLSPWCCNWRGVG
Trigger: ACCGACTCCTCTCCAGTTGCAACACCAGGGAGAAAGGGGCCTCCACATGCCCAAGTACCCCTGCAGGATGAAGGGCAGGCCGGCCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp GTGGGCTTCCATGCGGATGGAATCATTGGTCCCCACCAGGGAACCTaGACTGTGGGAGCTGCCGCCACCATAGGACCCAAGGGCTTCCAG +
Preference number: 1 (lower is better)
Translates to: VGFHADGIIGPHQGT*TVGAAATIGPKGFQ
Trigger: CTGGAAGCCCTTGGGTCCTATGGTGGCGGCAGCTCCCACAGTCCAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCATGGAAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp TGGGCCCCTAAGTGCACACGTGGGCTTCCATGCGGATGGAATCATTaGTCCCCACCAGGGAACCTGGACTGTGGGAGCTGCCGCCACCAT +
Preference number: 1 (lower is better)
Translates to: WAPKCTRGLPCGWNH*SPPGNLDCGSCRHH
Trigger: ATGGTGGCGGCAGCTCCCACAGTCCAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCATGGAAGCCCACGTGTGCACTTAGGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp TGTCTGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATaGTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCAGTGGGTG +
Preference number: 1 (lower is better)
Translates to: CLVGAEPPGWPSVTR*SISLPANELSPQWV
Trigger: CACCCACTGAGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp CTTGAGCTGCTGACGGCGGCCTGGAGAACCGTGTGTGGCTGTTCCTaGATGACATCTGCTGTCACTAGCCTTCCCAGAACACCCGCTGCC +
Preference number: 1 (lower is better)
Translates to: LELLTAAWRTVCGCS*MTSAVTSLPRTPAA
Trigger: GGCAGCGGGTGTTCTGGGAAGGCTAGTGACAGCAGATGTCATCCAGGAACAGCCACACACGGTTCTCCAGGCCGCCGTCAGCAGCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp CCAGGAAGAGGCAAACAGCCTGCCTGGGAACACAGTGCTGGAACTTaGGACTTGGGTTCTGAGCGGGGCTGCTCCCTGGGCTGTTGTCAT +
Preference number: 1 (lower is better)
Translates to: PGRGKQPAWEHSAGT*DLGSERGCSLGCCH
Trigger: ATGACAACAGCCCAGGGAGCAGCCCCGCTCAGAACCCAAGTCCCAAGTTCCAGCACTGTGTTCCCAGGCAGGCTGTTTGCCTCTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp CTGAGTTACAATGCTTGGAGCCCCCGAGGGCAGAGTGGCACCAGCTaGGAGGTTGACACTGCATCACTGCTTCGGATGCCCTCACAGGCT +
Preference number: 1 (lower is better)
Translates to: LSYNAWSPRGQSGTS*EVDTASLLRMPSQA
Trigger: AGCCTGTGAGGGCATCCGAAGCAGTGATGCAGTGTCAACCTCCCAGCTGGTGCCACTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 90 bp GGAAATAGCCCTGCAGGTTTTTGGGAAGCGTCTCCCTCCCTGTCGTaGGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACA +
Preference number: 1 (lower is better)
Translates to: GNSPAGFWEASPSLS*VPPGPSGRTGTGET
Trigger: TGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACAGGGAGGGAGACGCTTCCCAAAAACCTGCAGGGCTATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 90 bp AGCAACAAGCTGCGAGATCCTCAGCTTCTCACTCATACCCCACCTTaGGCTGCTGACGGCGGCCTGGAGAACCGTGTGTGGCTGTTCCTG +
Preference number: 1 (lower is better)
Translates to: SNKLRDPQLLTHTPP*AADGGLENRVWLFL
Trigger: CAGGAACAGCCACACACGGTTCTCCAGGCCGCCGTCAGCAGCTCAAGGTGGGGTATGAGTGAGAAGCTGAGGATCTCGCAGCTTGTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp CCCTTCTGCCATTTATGGGCCCCTAAGTGCACACGTGGGCTTCCATaGGGATGGAATCATTGGTCCCCACCAGGGAACCTGGACTGTGGG +
Preference number: 1 (lower is better)
Translates to: PFCHLWAPKCTRGLP*GWNHWSPPGNLDCG
Trigger: CCCACAGTCCAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCATGGAAGCCCACGTGTGCACTTAGGGGCCCATAAATGGCAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp GCTGTCACTAGCCTTCCCAGAACACCCGCTGCCCAGGGTTCCTGCTaGCTTCCCCGGTGGACAGATTTTGCAGGGAAGACTGAGGAAATG +
Preference number: 1 (lower is better)
Translates to: AVTSLPRTPAAQGSC*LPRWTDFAGKTEEM
Trigger: CATTTCCTCAGTCTTCCCTGCAAAATCTGTCCACCGGGGAAGGCAGCAGGAACCCTGGGCAGCGGGTGTTCTGGGAAGGCTAGTGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp TCTGCTGTCACTAGCCTTCCCAGAACACCCGCTGCCCAGGGTTCCTaGTGCCTTCCCCGGTGGACAGATTTTGCAGGGAAGACTGAGGAA +
Preference number: 1 (lower is better)
Translates to: SAVTSLPRTPAAQGS*CLPRWTDFAGKTEE
Trigger: TTCCTCAGTCTTCCCTGCAAAATCTGTCCACCGGGGAAGGCAGCAGGAACCCTGGGCAGCGGGTGTTCTGGGAAGGCTAGTGACAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp TGCCATTTATGGGCCCCTAAGTGCACACGTGGGCTTCCATGCGGATaGAATCATTGGTCCCCACCAGGGAACCTGGACTGTGGGAGCTGC +
Preference number: 1 (lower is better)
Translates to: CHLWAPKCTRGLPCG*NHWSPPGNLDCGSC
Trigger: GCAGCTCCCACAGTCCAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCATGGAAGCCCACGTGTGCACTTAGGGGCCCATAAATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp CTCTGGAGTCTCATTTGCAGAGTCTCATTTGTCGTCCGGTCACTGTaGCCACCTCACCCTCGTCACCACGGGCCTTTCCTGTGCCGTGCT +
Preference number: 1 (lower is better)
Translates to: LWSLICRVSFVVRSL*PPHPRHHGPFLCRA
Trigger: AGCACGGCACAGGAAAGGCCCGTGGTGACGAGGGTGAGGTGGCCACAGTGACCGGACGACAAATGAGACTCTGCAAATGAGACTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp AATGTACTCCCCTGGGCGCCTCTGCACCCTTCTGTCTACCAATCATaGTCTGAATGTTCCCCGGGAGCCAGTTCAAGGATCACCTCCCCC +
Preference number: 1 (lower is better)
Translates to: NVLPWAPLHPSVYQS*SECSPGASSRITSP
Trigger: GGGGGAGGTGATCCTTGAACTGGCTCCCGGGGAACATTCAGAGCATGATTGGTAGACAGAAGGGTGCAGAGGCGCCCAGGGGAGTACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp TGCAGGTTTTTGGGAAGCGTCTCCCTCCCTGTCGTGAGTTCCACCTaGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGCAAAGCA +
Preference number: 1 (lower is better)
Translates to: CRFLGSVSLPVVSST*ALRENRDRRNTSKA
Trigger: TGCTTTGCTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACAGGGAGGGAGACGCTTCCCAAAAACCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp GCCAGGGGTAAGCGGCCCCTAGTGGGTCACATGGCCTATGATGTCTaGAGACCGCAGATCTTCACCCTCTGGAGTCTCATTTGCAGAGTC +
Preference number: 1 (lower is better)
Translates to: ARGKRPLVGHMAYDV*RPQIFTLWSLICRV
Trigger: GACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTGCGGTCTCCAGACATCATAGGCCATGTGACCCACTAGGGGCCGCTTACCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp CTCAGCTTCTCACTCATACCCCACCTTGAGCTGCTGACGGCGGCCTaGAGAACCGTGTGTGGCTGTTCCTGGATGACATCTGCTGTCACT +
Preference number: 1 (lower is better)
Translates to: LSFSLIPHLELLTAA*RTVCGCSWMTSAVT
Trigger: AGTGACAGCAGATGTCATCCAGGAACAGCCACACACGGTTCTCCAGGCCGCCGTCAGCAGCTCAAGGTGGGGTATGAGTGAGAAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp TCCTGCAACAGCCTCTTAGCACTGCTCCACTCTGACCTGCCCGGCTaGAATCACAGTTCCCACTCCGGCACAGGTAAAGATGAGCTCCCA +
Preference number: 1 (lower is better)
Translates to: SCNSLLALLHSDLPG*NHSSHSGTGKDELP
Trigger: TGGGAGCTCATCTTTACCTGTGCCGGAGTGGGAACTGTGATTCCAGCCGGGCAGGTCAGAGTGGAGCAGTGCTAAGAGGCTGTTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 90 bp CCCACACCCACTCTGCACAGATCGGTGGTGCATCCGAGGCAGGGCTaGGTTAGAACAGGACATCCTAGACTCGGCGGCAGTGACTATTAT +
Preference number: 1 (lower is better)
Translates to: PTPTLHRSVVHPRQG*VRTGHPRLGGSDYY
Trigger: ATAATAGTCACTGCCGCCGAGTCTAGGATGTCCTGTTCTAACTCAGCCCTGCCTCGGATGCACCACCGATCTGTGCAGAGTGGGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 90 bp GACACTGCATCACTGCTTCGGATGCCCTCACAGGCTCTGACTCGCTaGCAGGTGCTGGTGAGGCTGGAAGAACTTCCTTCCTTCCTATGT +
Preference number: 1 (lower is better)
Translates to: DTASLLRMPSQALTR*QVLVRLEELPSFLC
Trigger: ACATAGGAAGGAAGGAAGTTCTTCCAGCCTCACCAGCACCTGGCAGCGAGTCAGAGCCTGTGAGGGCATCCGAAGCAGTGATGCAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp AACTCACCCCCTCTGCATGAGCAAATGCAGATGGACACTGGACTGTaGCGACTGACACCGGGACTCACACTTGCTGGTCAGTGGACGAGA +
Preference number: 1 (lower is better)
Translates to: NSPPLHEQMQMDTGL*RLTPGLTLAGQWTR
Trigger: TCTCGTCCACTGACCAGCAAGTGTGAGTCCCGGTGTCAGTCGGCACAGTCCAGTGTCCATCTGCATTTGCTCATGCAGAGGGGGTGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp GCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTaGGAGATCCTCAGCTTCTCACTCATACCCCACCTTGAGCTGCTG +
Preference number: 1 (lower is better)
Translates to: ADDSMSPVAPCSATS*EILSFSLIPHLELL
Trigger: CAGCAGCTCAAGGTGGGGTATGAGTGAGAAGCTGAGGATCTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp GCCATCCCGTCTTGTGCTGATGACAGCATGAGCCCGGTTGCACCTTaGTCAGCAACAAGCTGCGAGATCCTCAGCTTCTCACTCATACCC +
Preference number: 1 (lower is better)
Translates to: AIPSCADDSMSPVAP*SATSCEILSFSLIP
Trigger: GGGTATGAGTGAGAAGCTGAGGATCTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACAAGACGGGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp GAGATGCTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTaGTGTGAACAAGAGCCCCGGCTTGGGAACATGTCTCAGACTGGC +
Preference number: 1 (lower is better)
Translates to: EMLCLAWVVVGGQSK*CEQEPRLGNMSQTG
Trigger: GCCAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 90 bp AAAGGAAAACCAACAACAGGGAGTGCCCAACTCACCCCCTCTGCATaGGCAAATGCAGATGGACACTGGACTGTGCCGACTGACACCGGG +
Preference number: 1 (lower is better)
Translates to: KGKPTTGSAQLTPSA*ANADGHWTVPTDTG
Trigger: CCCGGTGTCAGTCGGCACAGTCCAGTGTCCATCTGCATTTGCTCATGCAGAGGGGGTGAGTTGGGCACTCCCTGTTGTTGGTTTTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp TATTATTCAGAAATGGCACATCAAGGGCCGGCCTGCCCTTCATCCTaGAGGGGTACTTGGGCATGTGGAGGCCCCTTTCTCCCTGGTGTT +
Preference number: 1 (lower is better)
Translates to: YYSEMAHQGPACPSS*RGTWACGGPFLPGV
Trigger: AACACCAGGGAGAAAGGGGCCTCCACATGCCCAAGTACCCCTGCAGGATGAAGGGCAGGCCGGCCCTTGATGTGCCATTTCTGAATAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 90 bp AACTTCCTTCCTTCCTATGTACAATGCAAACAGTGCCGCTTCCAGTaGTACCCACACGGGTGCAGCCTCACGGGAGAGTTGCGGAGAGAG +
Preference number: 1 (lower is better)
Translates to: NFLPSYVQCKQCRFQ*YPHGCSLTGELRRE
Trigger: CTCTCTCCGCAACTCTCCCGTGAGGCTGCACCCGTGTGGGTAGCACTGGAAGCGGCACTGTTTGCATTGTACATAGGAAGGAAGGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 90 bp CTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTaGGAAGATACCCGCTTACTTCCCCAGTCTCAGGCAGAGAGTTCG +
Preference number: 1 (lower is better)
Translates to: LAHGFSRSQSPTYAH*EDTRLLPQSQAESS
Trigger: CGAACTCTCTGCCTGAGACTGGGGAAGTAAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp GAACAGGACATCCTAGACTCGGCGGCAGTGACTATTATTCAGAAATaGCACATCAAGGGCCGGCCTGCCCTTCATCCTGCAGGGGTACTT +
Preference number: 1 (lower is better)
Translates to: EQDILDSAAVTIIQK*HIKGRPALHPAGVL
Trigger: AAGTACCCCTGCAGGATGAAGGGCAGGCCGGCCCTTGATGTGCCATTTCTGAATAATAGTCACTGCCGCCGAGTCTAGGATGTCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp AGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAAGCTaGGTTCCTGATGATTTCCAGCTAATACAGGTCCTTCCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: RGRLYPAHLREMEAS*VPDDFQLIQVLPPA
Trigger: TGCAGGAGGAAGGACCTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp GGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATaGTCACTGAGAAGATACCCGCTTACTTCCCCAGTCTCAGGCAGA +
Preference number: 1 (lower is better)
Translates to: GIAGPWLLKITVPNL*SLRRYPLTSPVSGR
Trigger: TCTGCCTGAGACTGGGGAAGTAAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 90 bp TATGATGTCTGGAGACCGCAGATCTTCACCCTCTGGAGTCTCATTTaGAGAGTCTCATTTGTCGTCCGGTCACTGTGGCCACCTCACCCT +
Preference number: 1 (lower is better)
Translates to: YDVWRPQIFTLWSLI*RVSFVVRSLWPPHP
Trigger: AGGGTGAGGTGGCCACAGTGACCGGACGACAAATGAGACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTGCGGTCTCCAGACATCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp GGTCACATGGCCTATGATGTCTGGAGACCGCAGATCTTCACCCTCTaGAGTCTCATTTGCAGAGTCTCATTTGTCGTCCGGTCACTGTGG +
Preference number: 1 (lower is better)
Translates to: GHMAYDVWRPQIFTL*SLICRVSFVVRSLW
Trigger: CCACAGTGACCGGACGACAAATGAGACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTGCGGTCTCCAGACATCATAGGCCATGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp AAGTTGGCTAGAGGGTACACTTCGGCAAAGGGATCATCTTCCCCCTaGCTTGCTGGACTCTTGGAAATGCGTCTGAAAGCCCTTGCCATC +
Preference number: 1 (lower is better)
Translates to: KLARGYTSAKGSSSP*LAGLLEMRLKALAI
Trigger: GATGGCAAGGGCTTTCAGACGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAAGATGATCCCTTTGCCGAAGTGTACCCTCTAGCCAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 90 bp ATTACAGGAATAAATCTGCACTTCCAAAGAGGCAGCTCCCATGACTaGGTTACAATGCTTGGAGCCCCCGAGGGCAGAGTGGCACCAGCT +
Preference number: 1 (lower is better)
Translates to: ITGINLHFQRGSSHD*VTMLGAPEGRVAPA
Trigger: AGCTGGTGCCACTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAGTCATGGGAGCTGCCTCTTTGGAAGTGCAGATTTATTCCTGTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 90 bp TCCATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTaGCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTGG +
Preference number: 1 (lower is better)
Translates to: SISSLFLHLSTNTQS*RSKASGQGLSCPLW
Trigger: CCAGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 90 bp GATTATTACAGGAATAAATCTGCACTTCCAAAGAGGCAGCTCCCATaGCTGAGTTACAATGCTTGGAGCCCCCGAGGGCAGAGTGGCACC +
Preference number: 1 (lower is better)
Translates to: DYYRNKSALPKRQLP*LSYNAWSPRGQSGT
Trigger: GGTGCCACTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAGTCATGGGAGCTGCCTCTTTGGAAGTGCAGATTTATTCCTGTAATAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 90 bp ACACCCATCCGGGAGTCCCCTGAGATGGAAATGACCCTCTTAAATTaGGGATCTCTGGAATGTCCTGATTATCTGCACCCAGTGTGCTTC +
Preference number: 1 (lower is better)
Translates to: TPIRESPEMEMTLLN*GSLECPDYLHPVCF
Trigger: GAAGCACACTGGGTGCAGATAATCAGGACATTCCAGAGATCCCCAATTTAAGAGGGTCATTTCCATCTCAGGGGACTCCCGGATGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 90 bp ACCGCCTTGAAGTGTAAACAGTCCAGAGAGAAACCGACTTTGCCATaGTCCCTCACCCAAGAAAGCCCTCTCTCAAAATGCGCTAGAAAG +
Preference number: 1 (lower is better)
Translates to: TALKCKQSREKPTLP*SLTQESPLSKCARK
Trigger: CTTTCTAGCGCATTTTGAGAGAGGGCTTTCTTGGGTGAGGGAGCATGGCAAAGTCGGTTTCTCTCTGGACTGTTTACACTTCAAGGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 90 bp TCTTGTGAACGCCGGAGTTTGGGCGCCATCCCGTGTTGTGCTGGTTaGTATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTC +
Preference number: 1 (lower is better)
Translates to: SCERRSLGAIPCCAG*YECVTAGGLFLRLL
Trigger: GAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATATCAACCAGCACAACACGGGATGGCGCCCAAACTCCGGCGTTCACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 90 bp CTGGCATTGAAAATGAAAGCCAGGATTCCTCTAAATCCACCGCCTTaGAGTGTAAACAGTCCAGAGAGAAACCGACTTTGCCATGCTCCC +
Preference number: 1 (lower is better)
Translates to: LALKMKARIPLNPPP*SVNSPERNRLCHAP
Trigger: GGGAGCATGGCAAAGTCGGTTTCTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTCATTTTCAATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 90 bp CCACTGTATTCCTGTTATCAGCCCTCATTCTCTATAAATGGAGTCTaGAGAACAGCAAAGACACAGGGAGGAGCCTGGAATTCCTACTGC +
Preference number: 1 (lower is better)
Translates to: PLYSCYQPSFSINGV*RTAKTQGGAWNSYC
Trigger: GCAGTAGGAATTCCAGGCTCCTCCCTGTGTCTTTGCTGTTCTTCAGACTCCATTTATAGAGAATGAGGGCTGATAACAGGAATACAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 90 bp CAAGAAAGCCCTCTCTCAAAATGCGCTAGAAAGTTTATATCTGCCTaGTCCAGAGAGCAAGTGGAAGGTGCGGAGAAGCCAGACAGAAAA +
Preference number: 1 (lower is better)
Translates to: QESPLSKCARKFISA*SREQVEGAEKPDRK
Trigger: TTTTCTGTCTGGCTTCTCCGCACCTTCCACTTGCTCTCTGGATCAGGCAGATATAAACTTTCTAGCGCATTTTGAGAGAGGGCTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp GTCTTTGCCACTGTATTCCTGTTATCAGCCCTCATTCTCTATAAATaGAGTCTGAAGAACAGCAAAGACACAGGGAGGAGCCTGGAATTC +
Preference number: 1 (lower is better)
Translates to: VFATVFLLSALILYK*SLKNSKDTGRSLEF
Trigger: GAATTCCAGGCTCCTCCCTGTGTCTTTGCTGTTCTTCAGACTCCATTTATAGAGAATGAGGGCTGATAACAGGAATACAGTGGCAAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 90 bp CAAAATGCGCTAGAAAGTTTATATCTGCCTGATCCAGAGAGCAAGTaGAAGGTGCGGAGAAGCCAGACAGAAAAATCGACCTTAACCAAG +
Preference number: 1 (lower is better)
Translates to: QNALESLYLPDPESK*KVRRSQTEKSTLTK
Trigger: CTTGGTTAAGGTCGATTTTTCTGTCTGGCTTCTCCGCACCTTCCACTTGCTCTCTGGATCAGGCAGATATAAACTTTCTAGCGCATTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGAGAGCCAGGGCACGCTaGGCAGGTGGCGGGGCCGAG +
Preference number: 2 (lower is better)
Translates to: QCSPFPFVGHTETGTSPARARAR*AGGGAE
Trigger: CTCGGCCCCGCCACCTGCCCAGCGTGCCCTGGCTCT...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACGCCAAGCGAGCCCCTaGAAAGGCTGTGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVRQASP*KGCGQP
Trigger: GGGCTGCCCACAGCCTTTTCAGGGGCTCGCTTGGCG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCAGGAGGGCGGCTTCCTaGCTCTGGGCACCGTGGTTC +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSRRAAS*LWAPWF
Trigger: GAACCACGGTGCCCAGAGCCAGGAAGCCGCCCTCCT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCCAGTGCCGCTTCCAGTaGTACCCACACGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSQCRFQ*YPHGCS
Trigger: GCTGCACCCGTGTGGGTAGCACTGGAAGCGGCACTG...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGCAGAGCCGCCTGGATaGCCCAGTGTCACTCGATGC +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSAEPPG*PSVTRC
Trigger: GCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGC...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCGGACAAGGCTTGTCCTaGCCTCTCTGGGGCCTGACT +
Preference number: 2 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLGQGLS*PLWGLT
Trigger: AGTCAGGCCCCAGAGAGGGCAGGACAAGCCTTGTCC...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAGAGAGAAGGCCTGGCTaGGGCCCCGTCACCCGCCAA +
Preference number: 2 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAERRPG*GPVTRQ
Trigger: TTGGCGGGTGACGGGGCCGCAGCCAGGCCTTCTCTC...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCCTGGACTGTGGGAGCTaGCGCCACCATAGGACCCAA +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSLDCGS*RHHRTQ
Trigger: TTGGGTCCTATGGTGGCGGCAGCTCCCACAGTCCAG...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCGTGAACGCCGGAGTTTaGGCGCCATCCCGTGTTGTG +
Preference number: 2 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLVNAGV*APSRVV
Trigger: CACAACACGGGATGGCGCCCAAACTCCGGCGTTCAC...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACACTGGGCTCCAGCCTaGGCGACAGAGACTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVHWAPA*ATETLS
Trigger: AGACAGAGTCTCTGTCGCCCAGGCTGGAGCCCAGTG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCACCGGGACTCACACTTaGTGGTCAGTGGACGAGAGG +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSTGTHT*WSVDER
Trigger: CCTCTCGTCCACTGACCAGCAAGTGTGAGTCCCGGT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGGGTGGCCAGAGTAAGTaGTGTGAACAAGAGCCCCGG +
Preference number: 2 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAGGQSK*CEQEPR
Trigger: CCGGGGCTCTTGTTCACACCACTTACTCTGGCCACC...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 90 bp CACCCGCTGCCCAGGGTTCCTGCTGCCTTCCCCGGTGGACAGATTTaGCAGGGAAGACTGAGGAAATGGGAGGGGGAGCTCTGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: HPLPRVPAAFPGGQI*QGRLRKWEGELCSK
Trigger: TTTAGAGCAGAGCTCCCCCTCCCATTTCCTCAGTCTTCCCTGCAAAATCTGTCCACCGGGGAAGGCAGCAGGAACCCTGGGCAGCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACATCCGGGAGTCCCCTaGGATGGAAATGACCCTCTT +
Preference number: 2 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVHPGVP*DGNDPL
Trigger: AAGAGGGTCATTTCCATCTCAGGGGACTCCCGGATG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACCGCCAAGCGAGCCCCTaGAAAGGCTGTGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHRQASP*KGCGQP
Trigger: GGGCTGCCCACAGCCTTTTCAGGGGCTCGCTTGGCG...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGGCAGCTCCCATGACTaGGTTACAATGCTTGGAGCC +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSGSSHD*VTMLGA
Trigger: GGCTCCAAGCATTGTAACTCAGTCATGGGAGCTGCC...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACGAGAGAAGGCCTGGCTaGGGCCCCGTCACCCGCCAA +
Preference number: 2 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHERRPG*GPVTRQ
Trigger: TTGGCGGGTGACGGGGCCGCAGCCAGGCCTTCTCTC...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCAAGGAGGGGCCCTTCTaGCATTTATGGGCCCCTAAG +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSKEGPF*HLWAPK
Trigger: CTTAGGGGCCCATAAATGGCAGAAGGGCCCCTCCTT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGTGGAGGAGACAGGGATaGCAAGCGGGAGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKWRRQG*QAGAGG
Trigger: TCCACCTGCTCCCGCTTGCCATCCCTGTCTCCTCCA...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTCTAGCTCCTGTCTGGTaGGAGCAGAGCCGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: KIRQACWPAPVVAATREALAPVW*EQSRLD
Trigger: ATCCAGGCGGCTCTGCTCCCACCAGACAGGAGCTAG...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGATCCAGAGAGCAAGTaGAAGGTGCGGAGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVDPESK*KVRRSQ
Trigger: CTGGCTTCTCCGCACCTTCCACTTGCTCTCTGGATC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAACAAGAGCCCCGGCTTaGGAACATGTCTCAGACTGG +
Preference number: 2 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVTRAPA*EHVSDW
Trigger: CCAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGGCGGCTTCCTGGCTCTaGGCACCGTGGTTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: CADDSMSPVAPCSATSCEAASWL*APWFCP
Trigger: AGGACAGAACCACGGTGCCCAGAGCCAGGAAGCCGC...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAGTCGTCCGGTCACTGTaGCCACCTCACCCTCGTCAC +
Preference number: 2 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAVVRSL*PPHPRH
Trigger: GTGACGAGGGTGAGGTGGCCACAGTGACCGGACGAC...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 90 bp GACCGCAGATCTTCACCCTCTGGAGTCTCATTTGCAGAGTCTCATTaGTCGTCCGGTCACTGTGGCCACCTCACCCTCGTCACCACGGGC +
Preference number: 2 (lower is better)
Translates to: DRRSSPSGVSFAESH*SSGHCGHLTLVTTG
Trigger: GCCCGTGGTGACGAGGGTGAGGTGGCCACAGTGACCGGACGACAAATGAGACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTGCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGGCCCTCTCTGGGGCCTaGCTGTGGGATAGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: CADDSMSPVAPCSATSCEALSGA*LWDRRF
Trigger: GAACCTTCTATCCCACAGTCAGGCCCCAGAGAGGGC...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCAAGACAGTCCCCAATaGCCCTGCTTTGCACGGGGC +
Preference number: 2 (lower is better)
Translates to: WPSVTRCSISLPANELSPQDSPQ*PCFARG
Trigger: GCCCCGTGCAAAGCAGGGGCATTGGGGACTGTCTTG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCCTATGTTGCCCAGGCTaGTTTCAACCTTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSLCCPG*FQPSGL
Trigger: GAGCCCAGAAGGTTGAAACCAGCCTGGGCAACATAG...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 90 bp CCTGCAGGGGTACTTGGGCATGTGGAGGCCCCTTTCTCCCTGGTGTaGCAACTGGAGAGGAGTCGGTTCCTGAAGAACAGATGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: PAGVLGHVEAPFSLV*QLERSRFLKNRWES
Trigger: ACTCTCCCATCTGTTCTTCAGGAACCGACTCCTCTCCAGTTGCAACACCAGGGAGAAAGGGGCCTCCACATGCCCAAGTACCCCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGGCTGCCAGGTGCTGGTaGGGCTGGAAGAACTTCCTT +
Preference number: 2 (lower is better)
Translates to: CADDSMSPVAPCSATSCEAARCW*GWKNFL
Trigger: AAGGAAGTTCTTCCAGCCTCACCAGCACCTGGCAGC...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAGTGCTGATGACAGCATaGGCCCGGTTGCACCTTGCT +
Preference number: 2 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAVLMTA*ARLHLA
Trigger: AGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCAC...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGACCCAGTGTGCTTCCTaGAGGAAGGCTAGCAGGACA +
Preference number: 2 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKTQCAS*RKASRT
Trigger: TGTCCTGCTAGCCTTCCTCCAGGAAGCACACTGGGT...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGCAGGGAGAGAAGGCCTaGCTGCGGCCCCGTCACCCG +
Preference number: 2 (lower is better)
Translates to: HLREMEASWVPDDFQLIQQGEKA*LRPRHP
Trigger: CGGGTGACGGGGCCGCAGCCAGGCCTTCTCTCCCTG...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTACAAGAGCCCCGGCTTaGGAACATGTCTCAGACTGG +
Preference number: 2 (lower is better)
Translates to: KIRQACWPAPVVAATREATRAPA*EHVSDW
Trigger: CCAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGT...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGCTCGAGGGACTAGTCTaGAATAGTAGGCCAAACGGT +
Preference number: 2 (lower is better)
Translates to: QCSPFPFVGHTETGTSPALEGLV*NSRPNG
Trigger: ACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAG...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACAGAAAAGCAGGTATTaGTGGCCCATGGCTTCTCAA +
Preference number: 2 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVQKSRY*WPMASQ
Trigger: TTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGGCAATCACACCTTACTaGAGCCTCAGTCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: CADDSMSPVAPCSATSCEAITPY*SLSLLG
Trigger: GCCCAGGAGACTGAGGCTGCAGTAAGGTGTGATTGC...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGGCTGCCCAGGGTTCCTaGTGCCTTCCCCGGTGGACA +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAAAQGS*CLPRWT
Trigger: TGTCCACCGGGGAAGGCAGCAGGAACCCTGGGCAGC...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGGGCACGCTGGGCAGGTaGCGGGGCCGAGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKGTLGR*RGREGR
Trigger: CCTCCCTTCTCGGCCCCGCCACCTGCCCAGCGTGCC...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGTGCTGCCTTCCCCGGTaGACAGATTTTGCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: CADDSMSPVAPCSATSCECCLPR*TDFAGK
Trigger: CTTCCCTGCAAAATCTGTCCACCGGGGAAGGCAGCA...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGACTCATACCCCACCTTaGGCTGCTGACGGCGGCCTG +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKATHTPP*AADGGL
Trigger: CAGGCCGCCGTCAGCAGCTCAAGGTGGGGTATGAGT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAAAGAGCCAGGGCACGCTaGGCAGGTGGCGGGGCCGAG +
Preference number: 2 (lower is better)
Translates to: YECVTAGGLFLRLLSWPERARAR*AGGGAE
Trigger: CTCGGCCCCGCCACCTGCCCAGCGTGCCCTGGCTCT...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAAAAAGCAGGTATTGCTaGCCCATGGCTTCTCAAGAT +
Preference number: 2 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVKSRYC*PMASQD
Trigger: ATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCATTCCCCCTGGCTTGCTaGACTCTTGGAAATGCGTCT +
Preference number: 2 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAFPLAC*TLGNAS
Trigger: AGACGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAA...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGAAGTTTATATCTGCCTaGTCCAGAGAGCAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAKFISA*SREQVE
Trigger: TTCCACTTGCTCTCTGGATCAGGCAGATATAAACTT...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAGGAGACTGCCCAGTGTaGTGCAAAAGGAAAACCAAC +
Preference number: 2 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAGDCPV*CKRKTN
Trigger: GTTGGTTTTCCTTTTGCAGCACACTGGGCAGTCTCC...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCAGAAGGCACAGAAGGTaGGGTTTTTGTTTTATAGGG +
Preference number: 2 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSRRHRR*GFCFIG
Trigger: CCCTATAAAACAAAAACCCCACCTTCTGTGCCTTCT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 90 bp TACACTTCGGCAAAGGGATCATCTTCCCCCTGGCTTGCTGGACTCTaGGAAATGCGTCTGAAAGCCCTTGCCATCCCGTCTTGTGCTGAT +
Preference number: 2 (lower is better)
Translates to: YTSAKGSSSPWLAGL*EMRLKALAIPSCAD
Trigger: ATCAGCACAAGACGGGATGGCAAGGGCTTTCAGACGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAAGATGATCCCTTTGCCGAAGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGTCACGTCTCCTCTTGTaGACGCCGGAGTTTGGGCGC +
Preference number: 2 (lower is better)
Translates to: ESQDSSKSTALKCKQSRESRLLL*TPEFGR
Trigger: GCGCCCAAACTCCGGCGTTCACAAGAGGAGACGTGA...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAATCTCTGGAATGTCCTaGTTATCTGCACCCAGTGTG +
Preference number: 2 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAISGMS*LSAPSV
Trigger: CACACTGGGTGCAGATAATCAGGACATTCCAGAGAT...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGGGCAATGTACTCCCCTaGGCGCCTCTGCACCCTTCT +
Preference number: 2 (lower is better)
Translates to: HLREMEASWVPDDFQLIQGNVLP*APLHPS
Trigger: AGAAGGGTGCAGAGGCGCCCAGGGGAGTACATTGCC...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGTGGAGGAGACAGGGATaGCAAGCGGGAGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: ESQDSSKSTALKCKQSREWRRQG*QAGAGG
Trigger: TCCACCTGCTCCCGCTTGCCATCCCTGTCTCCTCCA...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGCTCCCTTCCCGTTCGTaGGTCACACAGAGACAGGCA +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKALPSRS*VTQRQA
Trigger: TGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAG...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGGGGTCACATGGCCTATaGTGTCTGGAGACCGCAGAT +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAGSHGL*CLETAD
Trigger: ATCTGCGGTCTCCAGACATCATAGGCCATGTGACCC...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGTCCCCTGGGCGCCTCTaGACCCTTCTGTCTACCAAT +
Preference number: 2 (lower is better)
Translates to: ESQDSSKSTALKCKQSRESPGRL*TLLSTN
Trigger: ATTGGTAGACAGAAGGGTGCAGAGGCGCCCAGGGGA...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTACACAGGGAGGAGCCTaGAATTCCTACTGCACAGCC +
Preference number: 2 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLTQGGA*NSYCTA
Trigger: GGCTGTGCAGTAGGAATTCCAGGCTCCTCCCTGTGT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGACACAGGGAGGAGCCTaGAATTCCTACTGCACAGCC +
Preference number: 2 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMTQGGA*NSYCTA
Trigger: GGCTGTGCAGTAGGAATTCCAGGCTCCTCCCTGTGT...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGTTCCTGAAGAACAGATaGGAGAGTGCTGGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAFLKNR*ESAGAR
Trigger: CCTGGCCCCAGCACTCTCCCATCTGTTCTTCAGGAA...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAGGCACGAGAATTGCCTaGACCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: ICRRHLILESRPLAFRPSGTRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAGGCAATTCTCGTGCC...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGCTCACCCCCTCTGCATaGGCAAATGCAGATGGACAC +
Preference number: 2 (lower is better)
Translates to: HLREMEASWVPDDFQLIQLTPSA*ANADGH
Trigger: GTGTCCATCTGCATTTGCTCATGCAGAGGGGGTGAG...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGTCTTGGAAATGCGTCTaGAAGCCCTTGCCATCCCGT +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKASWKCV*KPLPSR
Trigger: ACGGGATGGCAAGGGCTTTCAGACGCATTTCCAAGA...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGAAGAGGCAAACAGCCTaGCTGGGAACACAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: HLREMEASWVPDDFQLIQKRQTA*LGTQCW
Trigger: CCAGCACTGTGTTCCCAGGCAGGCTGTTTGCCTCTT...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGACTGCACAGCCAGGATaGAGGAGACAGGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: ESQDSSKSTALKCKQSRETAQPG*RRQGWQ
Trigger: TTGCCATCCCTGTCTCCTCCATCCTGGCTGTGCAGT...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTAAACTACACATGTCCTaGGAATTTTGCTTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: KIRQACWPAPVVAATREAKLHMS*EFCFVV
Trigger: CACCACAAAGCAAAATTCCCAGGACATGTGTAGTTT...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCATGGCTCTGGGCACCGTaGTTCTGTCCTAACGAGGGG +
Preference number: 2 (lower is better)
Translates to: ICRRHLILESRPLAFRPSWLWAP*FCPNEG
Trigger: CCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCA...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGAATGCAGATGGACACTaGACTGTGCCGACTGACACC +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKANADGH*TVPTDT
Trigger: GGTGTCAGTCGGCACAGTCCAGTGTCCATCTGCATT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 90 bp AAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGAAACCGACTTaGCCATGCTCCCTCACCCAAGAAAGCCCTCTCTCAAAATGCGCT +
Preference number: 2 (lower is better)
Translates to: KSTALKCKQSREKPT*PCSLTQESPLSKCA
Trigger: AGCGCATTTTGAGAGAGGGCTTTCTTGGGTGAGGGAGCATGGCAAAGTCGGTTTCTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGCCGTGTTGTGCTGGTTaGTATGAATGTGTAACTGCT +
Preference number: 2 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEPCCAG*YECVTA
Trigger: AGCAGTTACACATTCATATCAACCAGCACAACACGG...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGTCACGTCTCCTCTTGTaGACGCCGGAGTTTGGGCGC +
Preference number: 2 (lower is better)
Translates to: TSPGLDFSNMICRRHLILSRLLL*TPEFGR
Trigger: GCGCCCAAACTCCGGCGTTCACAAGAGGAGACGTGA...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCATTTGTCCCCAGATTTTaGTCTAGCTTAAAGTCCCTT +
Preference number: 2 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAFVPRF*SSLKSL
Trigger: AAGGGACTTTAAGCTAGATCAAAATCTGGGGACAAA...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGCAAGACAGTCCCCAATaGCCCTGCTTTGCACGGGGC +
Preference number: 2 (lower is better)
Translates to: TSPGLDFSNMICRRHLILQDSPQ*PCFARG
Trigger: GCCCCGTGCAAAGCAGGGGCATTGGGGACTGTCTTG...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGATCTTCCCCCTGGCTTaGTGGACTCTTGGAAATGCG +
Preference number: 2 (lower is better)
Translates to: HLREMEASWVPDDFQLIQIFPLA*WTLGNA
Trigger: CGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAAGAT...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAAAACTACACATGTCCTaGGAATTTTGCTTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAKLHMS*EFCFVV
Trigger: CACCACAAAGCAAAATTCCCAGGACATGTGTAGTTT...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAGGTGGCCAGAGTAAGTaGTGTGAACAAGAGCCCCGG +
Preference number: 2 (lower is better)
Translates to: ICRRHLILESRPLAFRPSGGQSK*CEQEPR
Trigger: CCGGGGCTCTTGTTCACACCACTTACTCTGGCCACC...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CAA 90 bp TTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGCCCCGGCTaGGGAACATGTCTCAGACTGGCATTGAAAATGAAAGCCAGGATT +
Preference number: 2 (lower is better)
Translates to: LLLVARVSGVNKSPG*GTCLRLALKMKARI
Trigger: AATCCTGGCTTTCATTTTCAATGCCAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGTTCACACCACTTACTCTGGCCACCAACAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGGAGAGAGGAGGGAAATaGAATCCGGCACAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: TSPGLDFSNMICRRHLILERGGK*NPAQGL
Trigger: CAGCCCCTGTGCCGGATTTCATTTCCCTCCTCTCTC...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGATTACTCTGCTAACTTaGGGGCCCAAGAGTAGGGCT +
Preference number: 2 (lower is better)
Translates to: HLREMEASWVPDDFQLIQITLLT*GPKSRA
Trigger: AGCCCTACTCTTGGGCCCCCAAGTTAGCAGAGTAAT...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGCAGATCTTCACCCTCTaGAGTCTCATTTGCAGAGTC +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAQIFTL*SLICRV
Trigger: GACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTG...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGTGTCACCTCAGTGGGTaGTTTAACTGGATCTTTCCT +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKACHLSG*FNWIFP
Trigger: AGGAAAGATCCAGTTAAATCACCCACTGAGGTGACA...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTTGTCACCTCAGTGGGTaGTTTAACTGGATCTTTCCT +
Preference number: 2 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLCHLSG*FNWIFP
Trigger: AGGAAAGATCCAGTTAAATCACCCACTGAGGTGACA...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAACCAATACACAGAGCTaGCGGTCAAAGGCATCGGGA +
Preference number: 2 (lower is better)
Translates to: ICRRHLILESRPLAFRPSTNTQS*RSKASG
Trigger: TCCCGATGCCTTTGACCGGCAGCTCTGTGTATTGGT...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCGCCCAGGGTTCCTGCTaGCTTCCCCGGTGGACAGAT +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLAQGSC*LPRWTD
Trigger: ATCTGTCCACCGGGGAAGGCAGCAGGAACCCTGGGC...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGACCCAGTGTGCTTCCTaGAGGAAGGCTAGCAGGACA +
Preference number: 2 (lower is better)
Translates to: TSPGLDFSNMICRRHLILTQCAS*RKASRT
Trigger: TGTCCTGCTAGCCTTCCTCCAGGAAGCACACTGGGT...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGATGCTCTGTCTGGCCTaGGTTGTTGTTGGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: TSPGLDFSNMICRRHLILMLCLA*VVVGGQ
Trigger: CTGGCCACCAACAACAACCCAGGCCAGACAGAGCAT...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CAA 90 bp ACTGGCATTGAAAATGAAAGCCAGGATTCCTCTAAATCCACCGCCTaGAAGTGTAAACAGTCCAGAGAGAAACCGACTTTGCCATGCTCC +
Preference number: 2 (lower is better)
Translates to: TGIENESQDSSKSTA*KCKQSREKPTLPCS
Trigger: GGAGCATGGCAAAGTCGGTTTCTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTCATTTTCAATGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGTTTCTTCCTTGTTTCTaGATCTATCCACCAATACAC +
Preference number: 2 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEFLPCF*IYPPIH
Trigger: GTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAA...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCTGCTACCCACACGGGTaGAGCCTCACGGGAGAGTTG +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLCYPHG*SLTGEL
Trigger: CAACTCTCCCGTGAGGCTGCACCCGTGTGGGTAGCA...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTaGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCACCCACA +
Preference number: 2 (lower is better)
Translates to: TSPGLDFSNMICRRH*ILESRPLAFRPSPT
Trigger: TGTGGGTGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR TCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGTCTATAAATGGAGTCTaGAGAACAGCAAAGACACAG +
Preference number: 2 (lower is better)
Translates to: TPREEKMQTAFKAPVSKASINGV*RTAKTQ
Trigger: CTGTGTCTTTGCTGTTCTTCAGACTCCATTTATAGA...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGGGTATTGCTGGCCCATaGCTTCTCAAGATCACAGTC +
Preference number: 2 (lower is better)
Translates to: TSPGLDFSNMICRRHLILGIAGP*LLKITV
Trigger: GACTGTGATCTTGAGAAGCCATGGGCCAGCAATACC...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTGCCTGCCCTTCATCCTaGAGGGGTACTTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPACPSS*RGTWAC
Trigger: ACATGCCCAAGTACCCCTGCAGGATGAAGGGCAGGC...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCGATCCAGAGAGCAAGTaGAAGGTGCGGAGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLDPESK*KVRRSQ
Trigger: CTGGCTTCTCCGCACCTTCCACTTGCTCTCTGGATC...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCGAGCCCTGCATATTTTaGAAGGGAACCCCTCGAGGG +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLEPCIF*KGTPRG
Trigger: CCCTCGAGGGGTTCCCTTCCAAAATATGCAGGGCTC...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCAACAAGAGGGGCTATTaGGAGCGGAAACACCCATCC +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLNKRGY*ERKHPS
Trigger: GGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTT...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGTTTCTTCCTTGTTTCTaGATCTATCCACCAATACAC +
Preference number: 2 (lower is better)
Translates to: ESQDSSKSTALKCKQSREFLPCF*IYPPIH
Trigger: GTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAA...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR GCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCCCAACTCACCCCCTCTaGATGAGCAAATGCAGATGG +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLPTHPL*MSKCRW
Trigger: CCATCTGCATTTGCTCATGCAGAGGGGGTGAGTTGG...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR GCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCACATCCCCAGCGCTTTaGAAACAGAAGCGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLTSPAL*KQKRSQ
Trigger: TTGGGAGCGCTTCTGTTTGCAAAGCGCTGGGGATGT...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCGGATCATCTTCCCCCTaGCTTGCTGGACTCTTGGAA +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLGSSSP*LAGLLE
Trigger: TTCCAAGAGTCCAGCAAGCCAGGGGGAAGATGATCC...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR TCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCCTAAATCCACCGCCTTaGAGTGTAAACAGTCCAGAG +
Preference number: 2 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLLNPPP*SVNSPE
Trigger: CTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAG...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp GGCGCCAGGAGGGCGGCTTCCTGGCTCTGGGCACCGTaGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTA +
Preference number: 3 (lower is better)
Translates to: GARRAASWLWAP*FCPNEGRSLGV
Trigger: TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGAAGCCGCCCTCCTGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 72 bp GAAGCTCAGATGCTGGGCGCCAGGAGGGCGGCTTCCTaGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGG +
Preference number: 3 (lower is better)
Translates to: EAQMLGARRAAS*LWAPWFCPNEG
Trigger: CCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGAAGCCGCCCTCCTGGCGCCCAGCATCTGAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 72 bp CTGTGGGATAGAAGGTTCTGGAGAGCCAGGGCACGCTaGGCAGGTGGCGGGGCCGAGAAGGGAGGGAAGACA +
Preference number: 3 (lower is better)
Translates to: LWDRRFWRARAR*AGGGAEKGGKT
Trigger: TGTCTTCCCTCCCTTCTCGGCCCCGCCACCTGCCCAGCGTGCCCTGGCTCTCCAGAACCTTCTATCCCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 72 bp GGTGCAGCCTCACGGGAGAGTTGCGGAGAGAGGGAATaGGTTCAGTTCAGCCAGCGGACGGCCAGGGGTAAG +
Preference number: 3 (lower is better)
Translates to: GAASRESCGERE*VQFSQRTARGK
Trigger: CTTACCCCTGGCCGTCCGCTGGCTGAACTGAACGCATTCCCTCTCTCCGCAACTCTCCCGTGAGGCTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCTGTGAACGCCGGAGTTaGGGCGCCATCCCGTGTTGT +
Preference number: 3 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSCERRS*GAIPCC
Trigger: ACAACACGGGATGGCGCCCAAACTCCGGCGTTCACA...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp CCTGCAGGTTTTTGGGAAGCGTCTCCCTCCCTGTCGTaGGTTCCACCTGGGCCCTCCGGGAGAACAGGGACA +
Preference number: 3 (lower is better)
Translates to: PAGFWEASPSLS*VPPGPSGRTGT
Trigger: TGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACAGGGAGGGAGACGCTTCCCAAAAACCTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp AGTGCTACCCACACGGGTGCAGCCTCACGGGAGAGTTaGGGAGAGAGGGAATGCGTTCAGTTCAGCCAGCGG +
Preference number: 3 (lower is better)
Translates to: SATHTGAASRES*GERECVQFSQR
Trigger: CCGCTGGCTGAACTGAACGCATTCCCTCTCTCCGCAACTCTCCCGTGAGGCTGCACCCGTGTGGGTAGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp AATGCTTGGAGCCCCCGAGGGCAGAGTGGCACCAGCTaGGAGGTTGACACTGCATCACTGCTTCGGATGCCC +
Preference number: 3 (lower is better)
Translates to: NAWSPRGQSGTS*EVDTASLLRMP
Trigger: GGGCATCCGAAGCAGTGATGCAGTGTCAACCTCCCAGCTGGTGCCACTCTGCCCTCGGGGGCTCCAAGCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCACTGAGTTACAATGCTaGGAGCCCCCGAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSTELQC*EPPRAE
Trigger: CTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAGT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp CGGCGGCCTGGAGAACCGTGTGTGGCTGTTCCTGGATaGCATCTGCTGTCACTAGCCTTCCCAGAACACCCG +
Preference number: 3 (lower is better)
Translates to: RRPGEPCVAVPG*HLLSLAFPEHP
Trigger: CGGGTGTTCTGGGAAGGCTAGTGACAGCAGATGTCATCCAGGAACAGCCACACACGGTTCTCCAGGCCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp GGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATaGTCCATCTCTCTCCCCGCTAATGAGCTGTCACCT +
Preference number: 3 (lower is better)
Translates to: GAEPPGWPSVTR*SISLPANELSP
Trigger: AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 72 bp AGCCTTCCCAGAACACCCGCTGCCCAGGGTTCCTGCTaGCTTCCCCGGTGGACAGATTTTGCAGGGAAGACT +
Preference number: 3 (lower is better)
Translates to: SLPRTPAAQGSC*LPRWTDFAGKT
Trigger: AGTCTTCCCTGCAAAATCTGTCCACCGGGGAAGGCAGCAGGAACCCTGGGCAGCGGGTGTTCTGGGAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp ACTAGCCTTCCCAGAACACCCGCTGCCCAGGGTTCCTaGTGCCTTCCCCGGTGGACAGATTTTGCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: TSLPRTPAAQGS*CLPRWTDFAGK
Trigger: CTTCCCTGCAAAATCTGTCCACCGGGGAAGGCAGCAGGAACCCTGGGCAGCGGGTGTTCTGGGAAGGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp ATGCCCACACCTCTCCACCCAAGGGAACAGTCTCTCTaGTCCTCACCTGGCAGAAGCCCAGACCCTGAGTCC +
Preference number: 3 (lower is better)
Translates to: MPTPLHPREQSL*SSPGRSPDPES
Trigger: GGACTCAGGGTCTGGGCTTCTGCCAGGTGAGGAGCAGAGAGACTGTTCCCTTGGGTGGAGAGGTGTGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp AGGGAGGAGCCTGGAATTCCTACTGCACAGCCAGGATaGAGGAGACAGGGATGGCAAGCGGGAGCAGGTGGA +
Preference number: 3 (lower is better)
Translates to: REEPGIPTAQPG*RRQGWQAGAGG
Trigger: TCCACCTGCTCCCGCTTGCCATCCCTGTCTCCTCCATCCTGGCTGTGCAGTAGGAATTCCAGGCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 72 bp GGCCTGCCCTTCATCCTGCAGGGGTACTTGGGCATGTaGAGGCCCCTTTCTCCCTGGTGTTGCAACTGGAGA +
Preference number: 3 (lower is better)
Translates to: GLPFILQGYLGM*RPLSPWCCNWR
Trigger: TCTCCAGTTGCAACACCAGGGAGAAAGGGGCCTCCACATGCCCAAGTACCCCTGCAGGATGAAGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 72 bp CATGCGGATGGAATCATTGGTCCCCACCAGGGAACCTaGACTGTGGGAGCTGCCGCCACCATAGGACCCAAG +
Preference number: 3 (lower is better)
Translates to: HADGIIGPHQGT*TVGAAATIGPK
Trigger: CTTGGGTCCTATGGTGGCGGCAGCTCCCACAGTCCAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp TTGGGAAGCGTCTCCCTCCCTGTCGTGAGTTCCACCTaGGCCCTCCGGGAGAACAGGGACAGGAGAAACACA +
Preference number: 3 (lower is better)
Translates to: LGSVSLPVVSST*ALRENRDRRNT
Trigger: TGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACAGGGAGGGAGACGCTTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAATGTCAGAGCCCTCCTaGGGGGCTTCAGAAAAGCAG +
Preference number: 3 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVMSEPS*GASEKQ
Trigger: CTGCTTTTCTGAAGCCCCCAAGGAGGGCTCTGACAT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAAACAAGAGCCCCGGCTaGGGAACATGTCTCAGACTG +
Preference number: 3 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVNKSPG*GTCLRL
Trigger: CAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGTT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp TCCTCAGCTTCTCACTCATACCCCACCTTGAGCTGCTaGCGGCGGCCTGGAGAACCGTGTGTGGCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: SSASHSYPTLSC*RRPGEPCVAVP
Trigger: AGGAACAGCCACACACGGTTCTCCAGGCCGCCGTCAGCAGCTCAAGGTGGGGTATGAGTGAGAAGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp GTTCTCCTGCAACAGCCTCTTAGCACTGCTCCACTCTaGCCTGCCCGGCTGGAATCACAGTTCCCACTCCGG +
Preference number: 3 (lower is better)
Translates to: VLLQQPLSTAPL*PARLESQFPLR
Trigger: CCGGAGTGGGAACTGTGATTCCAGCCGGGCAGGTCAGAGTGGAGCAGTGCTAAGAGGCTGTTGCAGGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp AAGTGCACACGTGGGCTTCCATGCGGATGGAATCATTaGTCCCCACCAGGGAACCTGGACTGTGGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: KCTRGLPCGWNH*SPPGNLDCGSC
Trigger: GCAGCTCCCACAGTCCAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCATGGAAGCCCACGTGTGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp TGGGCCCCTAAGTGCACACGTGGGCTTCCATGCGGATaGAATCATTGGTCCCCACCAGGGAACCTGGACTGT +
Preference number: 3 (lower is better)
Translates to: WAPKCTRGLPCG*NHWSPPGNLDC
Trigger: ACAGTCCAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCATGGAAGCCCACGTGTGCACTTAGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp CAAGGTCTCCCAAAGGAGGGGCCCTTCTGCCATTTATaGGCCCCTAAGTGCACACGTGGGCTTCCATGCGGA +
Preference number: 3 (lower is better)
Translates to: QGLPKEGPFCHL*APKCTRGLPCG
Trigger: TCCGCATGGAAGCCCACGTGTGCACTTAGGGGCCCATAAATGGCAGAAGGGCCCCTCCTTTGGGAGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp TCTCCCTGGTGTTGCAACTGGAGAGGAGTCGGTTCCTaGAGAACAGATGGGAGAGTGCTGGGGCCAGGTACC +
Preference number: 3 (lower is better)
Translates to: SPWCCNWRGVGS*RTDGRVLGPGT
Trigger: GGTACCTGGCCCCAGCACTCTCCCATCTGTTCTTCAGGAACCGACTCCTCTCCAGTTGCAACACCAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp ACTCTGCACAGATCGGTGGTGCATCCGAGGCAGGGCTaGGTTAGAACAGGACATCCTAGACTCGGCGGCAGT +
Preference number: 3 (lower is better)
Translates to: TLHRSVVHPRQG*VRTGHPRLGGS
Trigger: ACTGCCGCCGAGTCTAGGATGTCCTGTTCTAACTCAGCCCTGCCTCGGATGCACCACCGATCTGTGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp AAGCCCTTGCCATCCCGTCTTGTGCTGATGACAGCATaGGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCG +
Preference number: 3 (lower is better)
Translates to: KPLPSRLVLMTA*ARLHLAQQQAA
Trigger: CGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACAAGACGGGATGGCAAGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp CCCTGGGCGCCTCTGCACCCTTCTGTCTACCAATCATaGTCTGAATGTTCCCCGGGAGCCAGTTCAAGGATC +
Preference number: 3 (lower is better)
Translates to: PWAPLHPSVYQS*SECSPGASSRI
Trigger: GATCCTTGAACTGGCTCCCGGGGAACATTCAGAGCATGATTGGTAGACAGAAGGGTGCAGAGGCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 72 bp ACTTCCAAAGAGGCAGCTCCCATGACTGAGTTACAATaGTTGGAGCCCCCGAGGGCAGAGTGGCACCAGCTG +
Preference number: 3 (lower is better)
Translates to: TSKEAAPMTELQ*LEPPRAEWHQL
Trigger: CAGCTGGTGCCACTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAGTCATGGGAGCTGCCTCTTTGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp CTCATTTGCAGAGTCTCATTTGTCGTCCGGTCACTGTaGCCACCTCACCCTCGTCACCACGGGCCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: LICRVSFVVRSL*PPHPRHHGPFL
Trigger: CAGGAAAGGCCCGTGGTGACGAGGGTGAGGTGGCCACAGTGACCGGACGACAAATGAGACTCTGCAAATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp TCACTCATACCCCACCTTGAGCTGCTGACGGCGGCCTaGAGAACCGTGTGTGGCTGTTCCTGGATGACATCT +
Preference number: 3 (lower is better)
Translates to: SLIPHLELLTAA*RTVCGCSWMTS
Trigger: AGATGTCATCCAGGAACAGCCACACACGGTTCTCCAGGCCGCCGTCAGCAGCTCAAGGTGGGGTATGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTGTGAACGCCGGAGTTaGGGCGCCATCCCGTGTTGT +
Preference number: 3 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHCERRS*GAIPCC
Trigger: ACAACACGGGATGGCGCCCAAACTCCGGCGTTCACA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGATGTCAGAGCCCTCCTaGGGGGCTTCAGAAAAGCAG +
Preference number: 3 (lower is better)
Translates to: CADDSMSPVAPCSATSCEMSEPS*GASEKQ
Trigger: CTGCTTTTCTGAAGCCCCCAAGGAGGGCTCTGACAT...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCATGGCCTGGGTTGTTGTaGGTGGCCAGAGTAAGTGGT +
Preference number: 3 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAWPGLL*VARVSG
Trigger: ACCACTTACTCTGGCCACCAACAACAACCCAGGCCA...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp ACACAAGCAAAGCAGACAGGCCCGGAATTGGGAGCCTaGGCCCTGCATATTTTGGAAGGGAACCCCTCGAGG +
Preference number: 3 (lower is better)
Translates to: TQAKQTGPELGA*ALHILEGNPSR
Trigger: CCTCGAGGGGTTCCCTTCCAAAATATGCAGGGCTCAGGCTCCCAATTCCGGGCCTGTCTGCTTTGCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp CCAACAACAGGGAGTGCCCAACTCACCCCCTCTGCATaGGCAAATGCAGATGGACACTGGACTGTGCCGACT +
Preference number: 3 (lower is better)
Translates to: PTTGSAQLTPSA*ANADGHWTVPT
Trigger: AGTCGGCACAGTCCAGTGTCCATCTGCATTTGCTCATGCAGAGGGGGTGAGTTGGGCACTCCCTGTTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp CATTTATGGGCCCCTAAGTGCACACGTGGGCTTCCATaGGGATGGAATCATTGGTCCCCACCAGGGAACCTG +
Preference number: 3 (lower is better)
Translates to: HLWAPKCTRGLP*GWNHWSPPGNL
Trigger: CAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCATGGAAGCCCACGTGTGCACTTAGGGGCCCATAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp AAGGAGGGGCCCTTCTGCCATTTATGGGCCCCTAAGTaGACACGTGGGCTTCCATGCGGATGGAATCATTGG +
Preference number: 3 (lower is better)
Translates to: KEGPFCHLWAPK*TRGLPCGWNHW
Trigger: CCAATGATTCCATCCGCATGGAAGCCCACGTGTGCACTTAGGGGCCCATAAATGGCAGAAGGGCCCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp CAAAGCAGACAGGCCCGGAATTGGGAGCCTGAGCCCTaGATATTTTGGAAGGGAACCCCTCGAGGGACTAGT +
Preference number: 3 (lower is better)
Translates to: QSRQARNWEPEP*IFWKGTPRGTS
Trigger: ACTAGTCCCTCGAGGGGTTCCCTTCCAAAATATGCAGGGCTCAGGCTCCCAATTCCGGGCCTGTCTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp CCTTCCTATGTACAATGCAAACAGTGCCGCTTCCAGTaGTACCCACACGGGTGCAGCCTCACGGGAGAGTTG +
Preference number: 3 (lower is better)
Translates to: PSYVQCKQCRFQ*YPHGCSLTGEL
Trigger: CAACTCTCCCGTGAGGCTGCACCCGTGTGGGTAGCACTGGAAGCGGCACTGTTTGCATTGTACATAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp CCTCTGCATGAGCAAATGCAGATGGACACTGGACTGTaGCGACTGACACCGGGACTCACACTTGCTGGTCAG +
Preference number: 3 (lower is better)
Translates to: PLHEQMQMDTGL*RLTPGLTLAGQ
Trigger: CTGACCAGCAAGTGTGAGTCCCGGTGTCAGTCGGCACAGTCCAGTGTCCATCTGCATTTGCTCATGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp TGGAATGTCCTGATTATCTGCACCCAGTGTGCTTCCTaGAGGAAGGCTAGCAGGACAGAGGAGCAGCGGAGG +
Preference number: 3 (lower is better)
Translates to: WNVLIICTQCAS*RKASRTEEQRR
Trigger: CCTCCGCTGCTCCTCTGTCCTGCTAGCCTTCCTCCAGGAAGCACACTGGGTGCAGATAATCAGGACATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 72 bp AGCCTCTTAGCACTGCTCCACTCTGACCTGCCCGGCTaGAATCACAGTTCCCACTCCGGCACAGGTAAAGAT +
Preference number: 3 (lower is better)
Translates to: SLLALLHSDLPG*NHSSHSGTGKD
Trigger: ATCTTTACCTGTGCCGGAGTGGGAACTGTGATTCCAGCCGGGCAGGTCAGAGTGGAGCAGTGCTAAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp ATGAGCAAATGCAGATGGACACTGGACTGTGCCGACTaGCACCGGGACTCACACTTGCTGGTCAGTGGACGA +
Preference number: 3 (lower is better)
Translates to: MSKCRWTLDCAD*HRDSHLLVSGR
Trigger: TCGTCCACTGACCAGCAAGTGTGAGTCCCGGTGTCAGTCGGCACAGTCCAGTGTCCATCTGCATTTGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp CTTCCCCCTGGCTTGCTGGACTCTTGGAAATGCGTCTaGAAGCCCTTGCCATCCCGTCTTGTGCTGATGACA +
Preference number: 3 (lower is better)
Translates to: LPPGLLDSWKCV*KPLPSRLVLMT
Trigger: TGTCATCAGCACAAGACGGGATGGCAAGGGCTTTCAGACGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp GCTTTGCACGGGGCAATGTACTCCCCTGGGCGCCTCTaGACCCTTCTGTCTACCAATCATGCTCTGAATGTT +
Preference number: 3 (lower is better)
Translates to: ALHGAMYSPGRL*TLLSTNHALNV
Trigger: AACATTCAGAGCATGATTGGTAGACAGAAGGGTGCAGAGGCGCCCAGGGGAGTACATTGCCCCGTGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 72 bp AGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTaGGAGATCCTCAGCTTCTCACTCATACCCCACCTT +
Preference number: 3 (lower is better)
Translates to: SMSPVAPCSATS*EILSFSLIPHL
Trigger: AAGGTGGGGTATGAGTGAGAAGCTGAGGATCTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp CGAACATTCTTGCTGCTTGGCAATGGGTGGCTCTCATaGCCACACCTCTCCACCCAAGGGAACAGTCTCTCT +
Preference number: 3 (lower is better)
Translates to: RTFLLLGNGWLS*PHLSTQGNSLS
Trigger: AGAGAGACTGTTCCCTTGGGTGGAGAGGTGTGGGCATGAGAGCCACCCATTGCCAAGCAGCAAGAATGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp CACCACGTCACGTCTCCTCTTGTGAACGCCGGAGTTTaGGCGCCATCCCGTGTTGTGCTGGTTGATATGAAT +
Preference number: 3 (lower is better)
Translates to: HHVTSPLVNAGV*APSRVVLVDMN
Trigger: ATTCATATCAACCAGCACAACACGGGATGGCGCCCAAACTCCGGCGTTCACAAGAGGAGACGTGACGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 72 bp TGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTaGTGTGAACAAGAGCCCCGGCTTGGGAACATGTCT +
Preference number: 3 (lower is better)
Translates to: CLAWVVVGGQSK*CEQEPRLGNMS
Trigger: AGACATGTTCCCAAGCCGGGGCTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 72 bp AAGCGGCCCCTAGTGGGTCACATGGCCTATGATGTCTaGAGACCGCAGATCTTCACCCTCTGGAGTCTCATT +
Preference number: 3 (lower is better)
Translates to: KRPLVGHMAYDV*RPQIFTLWSLI
Trigger: AATGAGACTCCAGAGGGTGAAGATCTGCGGTCTCCAGACATCATAGGCCATGTGACCCACTAGGGGCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTAAACAAGAGGGGCTATaGAGAGCGGAAACACCCATC +
Preference number: 3 (lower is better)
Translates to: WPSVTRCSISLPANELSPKQEGL*RAETPI
Trigger: GATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCTGTCTCAGACTGGCATaGAAAATGAAAGCCAGGATT +
Preference number: 3 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSCLRLA*KMKARI
Trigger: AATCCTGGCTTTCATTTTCAATGCCAGTCTGAGACA...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGGAGCCCGGTTGCACCTaGCTCAGCAACAAGCTGCGA +
Preference number: 3 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAEPGCT*LSNKLR
Trigger: TCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTC...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp GGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATaGTCACTGAGAAGATACCCGCTTACTTCCCCAGTC +
Preference number: 3 (lower is better)
Translates to: GPWLLKITVPNL*SLRRYPLTSPV
Trigger: GACTGGGGAAGTAAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 72 bp AGTGCTGGAACTTGGGACTTGGGTTCTGAGCGGGGCTaGTCCCTGGGCTGTTGTCATCACTCTTTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: SAGTWDLGSERG*SLGCCHHSFLF
Trigger: AAAAAGGAAAGAGTGATGACAACAGCCCAGGGAGCAGCCCCGCTCAGAACCCAAGTCCCAAGTTCCAGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp TGGAGACCGCAGATCTTCACCCTCTGGAGTCTCATTTaGAGAGTCTCATTTGTCGTCCGGTCACTGTGGCCA +
Preference number: 3 (lower is better)
Translates to: WRPQIFTLWSLI*RVSFVVRSLWP
Trigger: TGGCCACAGTGACCGGACGACAAATGAGACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTGCGGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp AAAACCAACAACAGGGAGTGCCCAACTCACCCCCTCTaGATGAGCAAATGCAGATGGACACTGGACTGTGCC +
Preference number: 3 (lower is better)
Translates to: KTNNRECPTHPL*MSKCRWTLDCA
Trigger: GGCACAGTCCAGTGTCCATCTGCATTTGCTCATGCAGAGGGGGTGAGTTGGGCACTCCCTGTTGTTGGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp TCTTGTGCTGATGACAGCATGAGCCCGGTTGCACCTTaGTCAGCAACAAGCTGCGAGATCCTCAGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: SCADDSMSPVAP*SATSCEILSFS
Trigger: TGAGAAGCTGAGGATCTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp GTACACTTCGGCAAAGGGATCATCTTCCCCCTGGCTTaGTGGACTCTTGGAAATGCGTCTGAAAGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: VHFGKGIIFPLA*WTLGNASESPC
Trigger: GCAAGGGCTTTCAGACGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAAGATGATCCCTTTGCCGAAGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp TGCCGACTGACACCGGGACTCACACTTGCTGGTCAGTaGACGAGAGGTAAAAGCAGGCAGGATTATTACAGG +
Preference number: 3 (lower is better)
Translates to: CRLTPGLTLAGQ*TRGKSRQDYYR
Trigger: CCTGTAATAATCCTGCCTGCTTTTACCTCTCGTCCACTGACCAGCAAGTGTGAGTCCCGGTGTCAGTCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp AGAGGGTACACTTCGGCAAAGGGATCATCTTCCCCCTaGCTTGCTGGACTCTTGGAAATGCGTCTGAAAGCC +
Preference number: 3 (lower is better)
Translates to: RGYTSAKGSSSP*LAGLLEMRLKA
Trigger: GGCTTTCAGACGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAAGATGATCCCTTTGCCGAAGTGTACCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp GGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTaGGAAGATACCCGCTTACTTCCCCAGTCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: GFSRSQSPTYAH*EDTRLLPQSQA
Trigger: TGCCTGAGACTGGGGAAGTAAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp ATAAATCTGCACTTCCAAAGAGGCAGCTCCCATGACTaGGTTACAATGCTTGGAGCCCCCGAGGGCAGAGTG +
Preference number: 3 (lower is better)
Translates to: INLHFQRGSSHD*VTMLGAPEGRV
Trigger: CACTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAGTCATGGGAGCTGCCTCTTTGGAAGTGCAGATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp AGGAATAAATCTGCACTTCCAAAGAGGCAGCTCCCATaGCTGAGTTACAATGCTTGGAGCCCCCGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: RNKSALPKRQLP*LSYNAWSPRGQ
Trigger: CTGCCCTCGGGGGCTCCAAGCATTGTAACTCAGTCATGGGAGCTGCCTCTTTGGAAGTGCAGATTTATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR GCA 72 bp TCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTaGCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGC +
Preference number: 3 (lower is better)
Translates to: SLFLHLSTNTQS*RSKASGQGLSC
Trigger: GCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR GCA 72 bp GATGATTTCCAGCTAATACAGGTCCTTCCTCCTGCATaGAGGCGCCCCGTAACGCTTTATAACAGACGCCTC +
Preference number: 3 (lower is better)
Translates to: DDFQLIQVLPPA*RRPVTLYNRRL
Trigger: GAGGCGTCTGTTATAAAGCGTTACGGGGCGCCTGCATGCAGGAGGAAGGACCTGTATTAGCTGGAAATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp GCCTATGATGTCTGGAGACCGCAGATCTTCACCCTCTaGAGTCTCATTTGCAGAGTCTCATTTGTCGTCCGG +
Preference number: 3 (lower is better)
Translates to: AYDVWRPQIFTL*SLICRVSFVVR
Trigger: CCGGACGACAAATGAGACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTGCGGTCTCCAGACATCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp CCCCAGCGCTTTGCAAACAGAAGCGCTCCCAAAAGTTaGCTAGAGGGTACACTTCGGCAAAGGGATCATCTT +
Preference number: 3 (lower is better)
Translates to: PQRFANRSAPKS*LEGTLRQRDHL
Trigger: AAGATGATCCCTTTGCCGAAGTGTACCCTCTAGCCAACTTTTGGGAGCGCTTCTGTTTGCAAAGCGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGAAACAAGAGGGGCTATaGAGAGCGGAAACACCCATC +
Preference number: 3 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEKQEGL*RAETPI
Trigger: GATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGGCACCAGCTGGGAGGTaGACACTGCATCACTGCTTC +
Preference number: 3 (lower is better)
Translates to: HLREMEASWVPDDFQLIQAPAGR*TLHHCF
Trigger: GAAGCAGTGATGCAGTGTCAACCTCCCAGCTGGTGC...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR-3UTR CAA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCACCCAATGCCCCTGCTTaGCACGGGGCAATGTACTCC +
Preference number: 3 (lower is better)
Translates to: ICRRHLILESRPLAFRPSPNAPA*HGAMYS
Trigger: GGAGTACATTGCCCCGTGCAAAGCAGGGGCATTGGG...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp CGCCGGAGTTTGGGCGCCATCCCGTGTTGTGCTGGTTaGTATGAATGTGTAACTGCTGGAGGTCTTTTCTTA +
Preference number: 3 (lower is better)
Translates to: RRSLGAIPCCAG*YECVTAGGLFL
Trigger: TAAGAAAAGACCTCCAGCAGTTACACATTCATATCAACCAGCACAACACGGGATGGCGCCCAAACTCCGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp GCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTaGGATGGAAATGACCCTCTTAAATTGGGGATCTCT +
Preference number: 3 (lower is better)
Translates to: AIESGNTHPGVP*DGNDPLKLGIS
Trigger: AGAGATCCCCAATTTAAGAGGGTCATTTCCATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGTCTAAATCCACCGCCTaGAAGTGTAAACAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQESKSTA*KCKQSR
Trigger: TCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGA...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CCA 72 bp CTGTACCCAGCACATCTCAGAGAGATGGAGGCAAGCTaGGTTCCTGATGATTTCCAGCTAATACAGGTCCTT +
Preference number: 3 (lower is better)
Translates to: LYPAHLREMEAS*VPDDFQLIQVL
Trigger: AAGGACCTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATGTGCTGGGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR TCA 72 bp AATGACCCTCTTAAATTGGGGATCTCTGGAATGTCCTaGTTATCTGCACCCAGTGTGCTTCCTGGAGGAAGG +
Preference number: 3 (lower is better)
Translates to: NDPLKLGISGMS*LSAPSVLPGGR
Trigger: CCTTCCTCCAGGAAGCACACTGGGTGCAGATAATCAGGACATTCCAGAGATCCCCAATTTAAGAGGGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp TCTCTCTCCCCGCTAATGAGCTGTCACCTCAGTGGGTaGTTTAACTGGATCTTTCCTGGTAAAACAAGAGGG +
Preference number: 3 (lower is better)
Translates to: SLSPLMSCHLSG*FNWIFPGKTRG
Trigger: CCCTCTTGTTTTACCAGGAAAGATCCAGTTAAATCACCCACTGAGGTGACAGCTCATTAGCGGGGAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp CCTCTCTCAAAATGCGCTAGAAAGTTTATATCTGCCTaGTCCAGAGAGCAAGTGGAAGGTGCGGAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: PLSKCARKFISA*SREQVEGAEKP
Trigger: TGGCTTCTCCGCACCTTCCACTTGCTCTCTGGATCAGGCAGATATAAACTTTCTAGCGCATTTTGAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTAATGACCCTCTTAAATaGGGGATCTCTGGAATGTCC +
Preference number: 3 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLNDPLK*GISGMS
Trigger: GGACATTCCAGAGATCCCCAATTTAAGAGGGTCATT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGAATGACCCTCTTAAATaGGGGATCTCTGGAATGTCC +
Preference number: 3 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMNDPLK*GISGMS
Trigger: GGACATTCCAGAGATCCCCAATTTAAGAGGGTCATT...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGCTTTTCCAACATGATTaGCAGAAGGCACTTGATTCT +
Preference number: 3 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGLFQHD*QKALDS
Trigger: AGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAG...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp CTAGAAAGTTTATATCTGCCTGATCCAGAGAGCAAGTaGAAGGTGCGGAGAAGCCAGACAGAAAAATCGACC +
Preference number: 3 (lower is better)
Translates to: LESLYLPDPESK*KVRRSQTEKST
Trigger: GGTCGATTTTTCTGTCTGGCTTCTCCGCACCTTCCACTTGCTCTCTGGATCAGGCAGATATAAACTTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR-3UTR CAA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCACCGGGACTCACACTaGCTGGTCAGTGGACGAGAG +
Preference number: 3 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPHRDSH*LVSGRE
Trigger: CTCTCGTCCACTGACCAGCAAGTGTGAGTCCCGGTG...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CCA 72 bp ACTGTATTCCTGTTATCAGCCCTCATTCTCTATAAATaGAGTCTGAAGAACAGCAAAGACACAGGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: TVFLLSALILYK*SLKNSKDTGRS
Trigger: GCTCCTCCCTGTGTCTTTGCTGTTCTTCAGACTCCATTTATAGAGAATGAGGGCTGATAACAGGAATACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp GCTTGGAACACAGTTGTAAACAAATGGACTGATTTATaGTGGAAGGCACGTTTCTTGCTGCAGATCATGGTC +
Preference number: 3 (lower is better)
Translates to: AWNTVVNKWTDL*WKARFLLQIMV
Trigger: GACCATGATCTGCAGCAAGAAACGTGCCTTCCATCATAAATCAGTCCATTTGTTTACAACTGTGTTCCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR TCA 72 bp GAAACCTGCTTGGAACACAGTTGTAAACAAATGGACTaGTTTATGATGGAAGGCACGTTTCTTGCTGCAGAT +
Preference number: 3 (lower is better)
Translates to: ETCLEHSCKQMD*FMMEGTFLAAD
Trigger: ATCTGCAGCAAGAAACGTGCCTTCCATCATAAATCAGTCCATTTGTTTACAACTGTGTTCCAAGCAGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCGCCGTGGCCAGCTGCTaGAACAGGGCCACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSAVASC*NRATGL
Trigger: GAGCCCCGTGGCCCTGTTCCAGCAGCTGGCCACGGC...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCAGCCTCCCGGAGGCCTaGGTGCTGGAGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSSLPEA*VLELCL
Trigger: GAGGCACAGCTCCAGCACGCAGGCCTCCGGGAGGCT...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCGAAGTCACTGGGCATTaGGGCCGGCCCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSEVTGH*GRPWPW
Trigger: CCAGGGCCAGGGCCGGCCCCAATGCCCAGTGACTTC...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCGGCACGCTGGGCAGGTaGCGGGGCCGAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLGTLGR*RGREGR
Trigger: CCTCCCTTCTCGGCCCCGCCACCTGCCCAGCGTGCC...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCTGCCCTCACAGGCTCTaGCTCGCTGCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSCPHRL*LAARCW
Trigger: CCAGCACCTGGCAGCGAGTCAGAGCCTGTGAGGGCA...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTATGCGCCGTGGCCAGCTaGTGGAACAGGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVCAVAS*WNRATG
Trigger: CCCCGTGGCCCTGTTCCAGCAGCTGGCCACGGCGCA...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCAGGAGGGCGGCTTCCTaGCTCTGGGCACCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSRRAAS*LWAPWF
Trigger: GAACCACGGTGCCCAGAGCCAGGAAGCCGCCCTCCT...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACCCACCTTGAGCTGCTaGCGGCGGCCTGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVPTLSC*RRPGEP
Trigger: CGGTTCTCCAGGCCGCCGTCAGCAGCTCAAGGTGGG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCAGCCTCCCGGAGGCCTaGGTGCTGGAGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLSLPEA*VLELCL
Trigger: GAGGCACAGCTCCAGCACGCAGGCCTCCGGGAGGCT...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCGTCAGCACGACCAGCTaGTCGCCATCCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSVSTTS*SPSRPV
Trigger: CACTGGCCTGGATGGCGAGCAGCTGGTCGTGCTGAC...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCTGGGCCTGCAGGCCCTaGAAGTTGGACTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSWACRP*KLDSGS
Trigger: AGACCCGGAGTCCAACTTCCAGGGCCTGCAGGCCCA...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCATGCGGCGGTGTGGCTaGGAGGGGCTCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLMRRCG*EGLVVS
Trigger: GCTGACCACGAGCCCCTCCCAGCCACACCGCCGCAT...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCGCGGCTTCCTGGCTCTaGGCACCGTGGTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSAASWL*APWFCP
Trigger: AGGACAGAACCACGGTGCCCAGAGCCAGGAAGCCGC...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCGGCCAGCTGCTGGGCTaGGAAGTGGTCATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSGQLLG*EVVMAK
Trigger: TTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCC...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCTCTCCCTCCCTGTCGTaGGTTCCACCTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSSPSLS*VPPGPS
Trigger: GGAGGGCCCAGGTGGAACTCACGACAGGGAGGGAGA...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCCGGAAAGGCAGGATCTaGGCCACAGCCTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSRKGRI*ATACLP
Trigger: AGGCAAGCAGGCTGTGGCGCAGATCCTGCCTTTCCG...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAGGCCCACGACGGCACTaGCCCTCTGCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAGPRRH*PSAGPA
Trigger: TGCGGGGCCTGCAGAGGGGCAGTGCCGTCGTGGGCC...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTGGCCCACGACGGCACTaGCCCTCTGCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSGPRRH*PSAGPA
Trigger: TGCGGGGCCTGCAGAGGGGCAGTGCCGTCGTGGGCC...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGTGCGCCGTGGCCAGCTaGTGGAACAGGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKCAVAS*WNRATG
Trigger: CCCCGTGGCCCTGTTCCAGCAGCTGGCCACGGCGCA...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAACCAGCTGGCCGGAGTaGGGCAGGACACCCGAGATG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVTSWPE*GRTPEM
Trigger: CATCTCGGGTGTCCTGCCGCACTCCGGCCAGCTGGT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGCTGCCCAGGGTTCCTaGTGCCTTCCCCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSAAQGS*CLPRWT
Trigger: TGTCCACCGGGGAAGGCAGCAGGAACCCTGGGCAGC...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCTCGCCATGGCCGATGTaGAAGACGAGCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSSPWPM*KTSCRG
Trigger: GCCCCGGCAGCTCGTCTTCCACATCGGCCATGGCGA...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGGACCTGGAAGTCACTaGGCATTGGGGCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVGPGSH*ALGPAL
Trigger: CAGGGCCGGCCCCAATGCCCAGTGACTTCCAGGTCC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCTGGAGGAGACAGGGATaGCAAGCGGGAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSWRRQG*QAGAGG
Trigger: TCCACCTGCTCCCGCTTGCCATCCCTGTCTCCTCCA...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCTGGCTCTGGGCACCGTaGTTCTGTCCTAACGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSWLWAP*FCPNEG
Trigger: CCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCA...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCCCATGGCCACGAGGGTaGGGACCTCCGTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSPWPRG*GPPSDG
Trigger: ACCATCTGACGGAGGTCCTCACCCTCGTGGCCATGG...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACCATGGCCACGAGGGTaGGGACCTCCGTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVPWPRG*GPPSDG
Trigger: ACCATCTGACGGAGGTCCTCACCCTCGTGGCCATGG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAATGTGGAAGACGAGCTaGCGGGGCAGGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVMWKTS*RGRHWL
Trigger: GAGCCAGTGCCTGCCCCGGCAGCTCGTCTTCCACAT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCTGCAGCAGGTGGGCCTaGAGGCCCTGGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSCSRWA*RPWKLD
Trigger: GTCCAACTTCCAGGGCCTGCAGGCCCACCTGCTGCA...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTGCGCAGAGCCGCTGCTaGAGGTGCACAGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAAQSRC*RCTGMG
Trigger: CCCCATGCCTGTGCACCTGCAGCAGCGGCTCTGCGC...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGTCAGCACGACCAGCTaGTCGCCATCCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSVSTTS*SPSRPV
Trigger: CACTGGCCTGGATGGCGAGCAGCTGGTCGTGCTGAC...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCCATCAAGGGCCGGCCTaGCCTTCATCCTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLHQGPA*PSSCRG
Trigger: ACCCCTGCAGGATGAAGGGCAGGCCGGCCCTTGATG...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTATGTCCCTGGAGCTCCTaGGCTTGCAGGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVCPWSS*ACRQPR
Trigger: TCTGGGCTGCCTGCAAGCCCAGGAGCTCCAGGGACA...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCTGTCCCTGGAGCTCCTaGGCTTGCAGGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLCPWSS*ACRQPR
Trigger: TCTGGGCTGCCTGCAAGCCCAGGAGCTCCAGGGACA...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGATAAGAGGACGGAGTaGGCGTCCCGCTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVDKRTE*ASRSRT
Trigger: TGTGCGGGAGCGGGACGCCCACTCCGTCCTCTTATC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTATCCAGGGTAGAGGCGTaGGGCCTTATGGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVSRVEA*GLMGQA
Trigger: AGCCTGGCCCATAAGGCCCCACGCCTCTACCCTGGA...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCAGATGGGCCACTTCTTaGGCTCATGGCCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLRWATS*AHGPPG
Trigger: GCCGGGTGGGCCATGAGCCCAAGAAGTGGCCCATCT...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGGGCACGCTGGGCAGGTaGCGGGGCCGAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMGTLGR*RGREGR
Trigger: CCTCCCTTCTCGGCCCCGCCACCTGCCCAGCGTGCC...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCAGGGAGAGAAGGCCTaGCTGCGGCCCCGTCACCCG +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPQGEKA*LRPRHP
Trigger: CGGGTGACGGGGCCGCAGCCAGGCCTTCTCTCCCTG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTGGCAGGCACTGGCTCTaGGCCGCGGCCCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSGRHWL*AAAQCF
Trigger: AAAGCACTGGGCCGCGGCGCAGAGCCAGTGCCTGCC...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTGCCCGTCGGCACCCATaGCCAGCAGCACCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSARRHP*PAAPGR
Trigger: TCGACCTGGTGCTGCTGGGCATGGGTGCCGACGGGC...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCACAGGTCCTTCCTCCTaGATGCAGGCGCCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSTGPSS*MQAPRN
Trigger: GTTACGGGGCGCCTGCATGCAGGAGGAAGGACCTGT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGCTCTTGACCCTGCTTaGGGGCTGTCAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSALDPA*GLSEQL
Trigger: GAGCTGCTCTGACAGCCCCCAAGCAGGGTCAAGAGC...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGTCGGCCGTCTTCAGTTaGCGGTACTGGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QCSPFPFVGHTETGTSPASAVFS*RYWLSC
Trigger: GCAGCTGAGCCAGTACCGCCAACTGAAGACGGCCGA...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGGGACCTGGAAGTCACTaGGCATTGGGGCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKGPGSH*ALGPAL
Trigger: CAGGGCCGGCCCCAATGCCCAGTGACTTCCAGGTCC...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTGCCGTGGCCAGCTGCTaGAACAGGGCCACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCAVASC*NRATGL
Trigger: GAGCCCCGTGGCCCTGTTCCAGCAGCTGGCCACGGC...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGATGTACCACACCAGCTaGCCGGAGTGCGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAMYHTS*PECGRT
Trigger: TGTCCTGCCGCACTCCGGCCAGCTGGTGTGGTACAT...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGTGGCTCTGGGCACCGTaGTTCTGTCCTAACGAGGGG +
Preference number: 4 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAWLWAP*FCPNEG
Trigger: CCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCA...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCTTCCTGAAGAACAGATaGGAGAGTGCTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSFLKNR*ESAGAR
Trigger: CCTGGCCCCAGCACTCTCCCATCTGTTCTTCAGGAA...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGGGGTACTTGGGCATGTaGAGGCCCCTTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAGYLGM*RPLSPW
Trigger: CCAGGGAGAAAGGGGCCTCCACATGCCCAAGTACCC...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGGGTACTTGGGCATGTaGAGGCCCCTTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVGYLGM*RPLSPW
Trigger: CCAGGGAGAAAGGGGCCTCCACATGCCCAAGTACCC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACCAGGGGCTCTGCCCCTaGGGATCTGCCGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHQGLCP*GSAASR
Trigger: CCGGCTGGCGGCAGATCCCCAGGGGCAGAGCCCCTG...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGGGGGCCAGGGGGTTTaGATCAGAATCCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVGGQGV*IRIQVP
Trigger: CGGAACCTGGATTCTGATCCAAACCCCCTGGCCCCC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602477.1
3UTR CAA 72 bp CAGTGCTACCCACACGGGTGCAGCCTCACGGGAGAGTaGCGGAGAGAGGGAATGCGTTCAGTTCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: QCYPHGCSLTGE*RREGMRSVQPA
Trigger: CGCTGGCTGAACTGAACGCATTCCCTCTCTCCGCAACTCTCCCGTGAGGCTGCACCCGTGTGGGTAGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGGCGAAGGGTGGCACTaGGAAGTAGAAGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVGEGWH*EVEDPA
Trigger: GGCAGGATCTTCTACTTCTCAGTGCCACCCTTCGCC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCGGCGAAGGGTGGCACTaGGAAGTAGAAGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLGEGWH*EVEDPA
Trigger: GGCAGGATCTTCTACTTCTCAGTGCCACCCTTCGCC...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCGCCAAGCGAGCCCCTaGAAAGGCTGTGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCRQASP*KGCGQP
Trigger: GGGCTGCCCACAGCCTTTTCAGGGGCTCGCTTGGCG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCACGTCACTCCGACAAGTaGGCGTGTCACGCGGCCACG +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEARHSDK*ACHAAT
Trigger: CGTGGCCGCGTGACACGCGCACTTGTCGGAGTGACG...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTACCCGCTCCACATGGTaGCGGTTCCAGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSTRSTW*RFQRPS
Trigger: GGACGGCCTCTGGAACCGGCACCATGTGGAGCGGGT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCCGAAGGTTGTCAATGTaGACTAGGACGGCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSRRLSM*TRTAAK
Trigger: CTTCGCAGCCGTCCTAGTGCACATTGACAACCTTCG...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTGCACCAGGTCGAAGCTaGTGTTGGCCACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAAPGRS*CWPPGL
Trigger: CAGCCCTGGTGGCCAACAGCAGCTTCGACCTGGTGC...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTGCCCGTCGGCACCCATaGCCAGCAGCACCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCARRHP*PAAPGR
Trigger: TCGACCTGGTGCTGCTGGGCATGGGTGCCGACGGGC...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGCCTGCCCTTCATCCTaGAGGGGTACTTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSACPSS*RGTWAC
Trigger: ACATGCCCAAGTACCCCTGCAGGATGAAGGGCAGGC...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAAGCCCGGTTGCACCTTaGTCAGCAACAAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVSPVAP*SATSCE
Trigger: CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGCGGAGGCCTGCGTGCTaGAGCTGTGCCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCERRPAC*SCASMS
Trigger: GGACATCGAGGCACAGCTCCAGCACGCAGGCCTCCG...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGCCAGGCGCCCGGGCCTaGCCGGCAGCTACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMPGARA*PAATVD
Trigger: ATCAACAGTAGCTGCCGGCCAGGCCCGGGCGCCTGG...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCAAAGCCTTGCGGTTCTaGTCTCGGAAAGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSKALRF*SRKGRI
Trigger: GATCCTGCCTTTCCGAGACCAGAACCGCAAGGCTTT...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCACCCGACAGTGCCAGGTaGAACTGGCCAAAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAPDSAR*NWPKRR
Trigger: GCGGCGCTTTGGCCAGTTCCACCTGGCACTGTCGGG...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCCCGACAGTGCCAGGTaGAACTGGCCAAAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPPDSAR*NWPKRR
Trigger: GCGGCGCTTTGGCCAGTTCCACCTGGCACTGTCGGG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTAGCCATAGTGCGCCGTaGCCAGCTGCTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREASHSAP*PAAGTG
Trigger: CCCTGTTCCAGCAGCTGGCCACGGCGCACTATGGCT...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTGCTGGGAGGGGCTCGTaGTCAGCACGACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPAGRGS*SARPAA
Trigger: AGCAGCTGGTCGTGCTGACCACGAGCCCCTCCCAGC...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTGCTCATGCGGCGGTGTaGCTGGGAGGGGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCAHAAV*LGGARG
Trigger: ACCACGAGCCCCTCCCAGCCACACCGCCGCATGAGC...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTCACTTCTTGGGCTCATaGCCCACCCGGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAHFLGS*PTRLTS
Trigger: GCTGGTGAGCCGGGTGGGCCATGAGCCCAAGAAGTG...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTCAGATGGGAGAGTGCTaGGGCCAGGTACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAQMGEC*GQVPWE
Trigger: CTCCCAGGGTACCTGGCCCCAGCACTCTCCCATCTG...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGTCCTGCAGGGGTACTTaGGCATGTGGAGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: QCSPFPFVGHTETGTSPASCRGT*ACGGPF
Trigger: AAAGGGGCCTCCACATGCCCAAGTACCCCTGCAGGA...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTGTCGTGAGTTCCACCTaGGCCCTCCGGGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAVVSST*ALRENR
Trigger: CCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGAC...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 72 bp CCCAGGGTTCCTGCTGCCTTCCCCGGTGGACAGATTTaGCAGGGAAGACTGAGGAAATGGGAGGGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PRVPAAFPGGQI*QGRLRKWEGEL
Trigger: GAGCTCCCCCTCCCATTTCCTCAGTCTTCCCTGCAAAATCTGTCCACCGGGGAAGGCAGCAGGAACCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTTGCCAGACATCAGGATaGAAGGCACGCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREACQTSG*KARPPS
Trigger: GCTGGGAGGGCGTGCCTTTCATCCTGATGTCTGGCA...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAAGCAGGCCTGGTTCTTaGACAAGATCCGAGCGTAGC +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVSRPGS*TRSERS
Trigger: GCTACGCTCGGATCTTGTTCAAGAACCAGGCCTGCT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCCATCCGGGAGTCCCCTaGGATGGAAATGACCCTCTT +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLHPGVP*DGNDPL
Trigger: AAGAGGGTCATTTCCATCTCAGGGGACTCCCGGATG...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCCTGCAGATCATGGTCTaGAGTTTGAAAGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSLQIMV*SLKATS
Trigger: GCTGGTGGCTTTCAAACTTCAGACCATGATCTGCAG...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGTGGCTGTTCCTGGATaGCATCTGCTGTCACTAGCC +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSVAVPG*HLLSLA
Trigger: GGCTAGTGACAGCAGATGTCATCCAGGAACAGCCAC...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAAGTTCTGTGGCCAGCTaGTGGGCTGAGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVSSVAS*WAEKWS
Trigger: TGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACAGTGCTTTTCGCTCTaGACACAGCAGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVQCFSL*TQQAWF
Trigger: GAACCAGGCCTGCTGTGTGCAGAGCGAAAAGCACTG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTTGCAGCAGGTGGGCCTaGAGGCCCTGGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPCSRWA*RPWKLD
Trigger: GTCCAACTTCCAGGGCCTGCAGGCCCACCTGCTGCA...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGGGATCCGGACGTGCTaGAGCAGGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEGIRTC*SRWACR
Trigger: CCTGCAGGCCCACCTGCTGCAGCACGTCCGGATCCC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTAAGAGGGAGGCTGTGTaGCCGTCGGCACCCATGCCC +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCKREAV*PSAPMP
Trigger: GGGCATGGGTGCCGACGGGCACACAGCCTCCCTCTT...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTACCAGCTGGCCGGAGTaGGGCAGGACACCCGAGATG +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCTSWPE*GRTPEM
Trigger: CATCTCGGGTGTCCTGCCGCACTCCGGCCAGCTGGT...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTGGACAAGGCTTGTCCTaGCCTCTCTGGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAGQGLS*PLWGLT
Trigger: AGTCAGGCCCCAGAGAGGGCAGGACAAGCCTTGTCC...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGAGAGAAGGCCTGGCTaGGGCCCCGTCACCCGCCAA +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEERRPG*GPVTRQ
Trigger: TTGGCGGGTGACGGGGCCGCAGCCAGGCCTTCTCTC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCACATCAAGGGCCGGCCTaGCCTTCATCCTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAHQGPA*PSSCRG
Trigger: ACCCCTGCAGGATGAAGGGCAGGCCGGCCCTTGATG...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTGCCCAGGGTTCCTGCTaGCTTCCCCGGTGGACAGAT +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPAQGSC*LPRWTD
Trigger: ATCTGTCCACCGGGGAAGGCAGCAGGAACCCTGGGC...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGAGGGAACAGTCTCTCTaGTCCTCACCTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAREQSL*SSPGRS
Trigger: GCTTCTGCCAGGTGAGGAGCAGAGAGACTGTTCCCT...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGAGGTCCCGAGTTCTGTaGCCAGCTGCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKRSRVL*PAAGLR
Trigger: TCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCT...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTTCCAGGGTAGAGGCGTaGGGCCTTATGGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSSRVEA*GLMGQA
Trigger: AGCCTGGCCCATAAGGCCCCACGCCTCTACCCTGGA...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGAGTGCCAGGTGGAACTaGCCAAAGCGCCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCESARWN*PKRRTA
Trigger: AGCCGTGCGGCGCTTTGGCCAGTTCCACCTGGCACT...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTGGGCTGAGATCTCCCTaGCATAGATCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAGLRSP*HRSGRP
Trigger: AGGGCGCCCAGATCTATGCCAGGGAGATCTCAGCCC...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTAGATGGGCCACTTCTTaGGCTCATGGCCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPRWATS*AHGPPG
Trigger: GCCGGGTGGGCCATGAGCCCAAGAAGTGGCCCATCT...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTAGAGCCAGGGCACGCTaGGCAGGTGGCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLRARAR*AGGGAE
Trigger: CTCGGCCCCGCCACCTGCCCAGCGTGCCCTGGCTCT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCACTGCACAGCCAGGATaGAGGAGACAGGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLTAQPG*RRQGWQ
Trigger: TTGCCATCCCTGTCTCCTCCATCCTGGCTGTGCAGT...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAACACAGGGAGGAGCCTaGAATTCCTACTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVTQGGA*NSYCTA
Trigger: GGCTGTGCAGTAGGAATTCCAGGCTCCTCCCTGTGT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAACCCAGTGTGCTTCCTaGAGGAAGGCTAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVTQCAS*RKASRT
Trigger: TGTCCTGCTAGCCTTCCTCCAGGAAGCACACTGGGT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTCACTGGGCTCCAGCCTaGGCGACAGAGACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAHWAPA*ATETLS
Trigger: AGACAGAGTCTCTGTCGCCCAGGCTGGAGCCCAGTG...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTCCACGCGGCCAGCTGTaGAACTTCCACCACGACTCC +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSPRGQL*NFHHDS
Trigger: GGAGTCGTGGTGGAAGTTCCACAGCTGGCCGCGTGG...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGCCCCACCAGGGAACCTaGACTGTGGGAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEPHQGT*TVGAAA
Trigger: GGCGGCAGCTCCCACAGTCCAGGTTCCCTGGTGGGG...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCCTGAGTTACAATGCTTaGAGCCCCCGAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSLSYNA*SPRGQS
Trigger: ACTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAG...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 72 bp TCCAAAGAGGCAGCTCCCATGACTGAGTTACAATGCTaGGAGCCCCCGAGGGCAGAGTGGCACCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SKEAAPMTELQC*EPPRAEWHQLG
Trigger: TCCCAGCTGGTGCCACTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAGTCATGGGAGCTGCCTCTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCATTGGCCATGAGCTCTTaGCCCTGCTTGGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEALAMSS*PCLGAV
Trigger: GACAGCCCCCAAGCAGGGTCAAGAGCTCATGGCCAA...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGCAGCCTCCGCACTGCTaGCATTGTGGGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKQPPHC*HCGAAP
Trigger: TGGAGCTGCCCCACAATGTCAGCAGTGCGGAGGCTG...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCAGCCTCCGCACTGCTaGCATTGTGGGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCQPPHC*HCGAAP
Trigger: TGGAGCTGCCCCACAATGTCAGCAGTGCGGAGGCTG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAACAACCGGCCGCTACTaGACTCAAAGTCCAACAGAC +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVTTGRY*TQSPTD
Trigger: GTCTGTTGGACTTTGAGTTCAGTAGCGGCCGGTTGT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCAACAAGAGGGGCTATTaGGAGCGGAAACACCCATCC +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLNKRGY*ERKHPS
Trigger: GGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTT...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTGGCACGAGAATTGCCTaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSGTRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAGGCAATTCTCGTGCC...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAAGAGGAGTCGGTTCCTaGAGAACAGATGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVRGVGS*RTDGRV
Trigger: CACTCTCCCATCTGTTCTTCAGGAACCGACTCCTCT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTCTGGACTGTGCCGACTaGCACCGGGACTCACACTTG +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSLDCAD*HRDSHL
Trigger: CAAGTGTGAGTCCCGGTGTCAGTCGGCACAGTCCAG...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTCCCGGAGGCCTGCGTaGTGGAGCTGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHSRRPA*WSCASM
Trigger: CATCGAGGCACAGCTCCAGCACGCAGGCCTCCGGGA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGAGAAGTAGAAGATCCTaGCAGCCTCCCGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKRSRRS*QPPGGL
Trigger: CAGGCCTCCGGGAGGCTGGCAGGATCTTCTACTTCT...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGACCCGCTCCACATGGTaGCGGTTCCAGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQETRSTW*RFQRPS
Trigger: GGACGGCCTCTGGAACCGGCACCATGTGGAGCGGGT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCCGAAGGTTGTCAATGTaGACTAGGACGGCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLRRLSM*TRTAAK
Trigger: CTTCGCAGCCGTCCTAGTGCACATTGACAACCTTCG...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGTGCGCCGCGGCCCAGTaGTTTTCGCTCTGCACACAG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMCAAAQ*FSLCTQ
Trigger: CTGTGTGCAGAGCGAAAAGCACTGGGCCGCGGCGCA...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCCAGCACGGCAGGGCTaGCCAGGTCGCCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLPARQG*PGRHGR
Trigger: TCGGCCATGGCGACCTGGGCAGCCCTGCCGTGCTGG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTCGGCGCAGAGCCGCTaGTGCAGGTGCACAGGCATG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHSAQSR*CRCTGM
Trigger: CATGCCTGTGCACCTGCAGCAGCGGCTCTGCGCCGA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGAAGAGGGAGGCTGTGTaGCCGTCGGCACCCATGCCC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEKREAV*PSAPMP
Trigger: GGGCATGGGTGCCGACGGGCACACAGCCTCCCTCTT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTCAAGACAGTCCCCAATaGCCCTGCTTTGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSQDSPQ*PCFARG
Trigger: GCCCCGTGCAAAGCAGGGGCATTGGGGACTGTCTTG...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCCTTTCTCCCTGGTGTTaGAACTGGAGAGGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLLSPWC*NWRGVG
Trigger: ACCGACTCCTCTCCAGTTGCAACACCAGGGAGAAAG...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGTGCACAGATCGGTGGTaGATCCGAGGCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCECTDRW*IRGRAE
Trigger: CTCAGCCCTGCCTCGGATGCACCACCGATCTGTGCA...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCTGGACTGTGGGAGCTaGCGCCACCATAGGACCCAA +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPLDCGS*RHHRTQ
Trigger: TTGGGTCCTATGGTGGCGGCAGCTCCCACAGTCCAG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTTGCGGAGAGAGGGAATaGGTTCAGTTCAGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREACGERE*VQFSQR
Trigger: CCGCTGGCTGAACTGAACGCATTCCCTCTCTCCGCA...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTTGCTACCCACACGGGTaGAGCCTCACGGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSCYPHG*SLTGEL
Trigger: CAACTCTCCCGTGAGGCTGCACCCGTGTGGGTAGCA...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCATGACTGAGTTACAATaGTTGGAGCCCCCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSMTELQ*LEPPRA
Trigger: TGCCCTCGGGGGCTCCAAGCATTGTAACTCAGTCAT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTTCCCAGAACACCCGCTaGCCAGGGTTCCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCSQNTR*PGFLLP
Trigger: AGGCAGCAGGAACCCTGGGCAGCGGGTGTTCTGGGA...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGTGTCATTACTCCAGTaGTCTCCCTTCCCGTTCGTG +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVVSLLQ*SPFPFV
Trigger: CACGAACGGGAAGGGAGAGCACTGGAGTAATGACAC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCTGCCCCTGGGGATCTaGCGCCAGCCGGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLLPLGI*RQPALP
Trigger: GGGAAGAGCCGGCTGGCGGCAGATCCCCAGGGGCAG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTTCGGCCGTCTTCAGTTaGCGGTACTGGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSSAVFS*RYWLSC
Trigger: GCAGCTGAGCCAGTACCGCCAACTGAAGACGGCCGA...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCACTCCTCATAGAAGCTaGTGCGGCCTTCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLTPHRS*CGLQHP
Trigger: TGGATGCTGAAGGCCGCACCAGCTTCTATGAGGAGT...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTATCCGTCAGATGGTTCTaGAGGACGTCGCGAATGACA +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVSVRWF*RTSRMT
Trigger: TGTCATTCGCGACGTCCTCCAGAACCATCTGACGGA...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTAGGACCTCCGTCAGATaGTTCTGGAGGACGTCGCGA +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREARTSVR*FWRTSR
Trigger: TCGCGACGTCCTCCAGAACCATCTGACGGAGGTCCT...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGGTCGGCGTCAGGCTGTaGAAGCTGTCTGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCEVGVRL*KLSGFC
Trigger: GCAGAAGCCAGACAGCTTCCACAGCCTGACGCCGAC...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGTCGCCATGGCCGATGTaGAAGACGAGCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQESPWPM*KTSCRG
Trigger: GCCCCGGCAGCTCGTCTTCCACATCGGCCATGGCGA...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTGATAAGAGGACGGAGTaGGCGTCCCGCTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCDKRTE*ASRSRT
Trigger: TGTGCGGGAGCGGGACGCCCACTCCGTCCTCTTATC...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCATGCTCCGGCTGCTGCTaGGAAAAGAACAACCGGCCG +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEACSGCC*EKNNRP
Trigger: CGGCCGGTTGTTCTTTTCCCAGCAGCAGCCGGAGCA...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAGTGAACGCCGGAGTTTaGGCGCCATCCCGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAVNAGV*APSRVV
Trigger: CACAACACGGGATGGCGCCCAAACTCCGGCGTTCAC...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGGCAGAGCCGCCTGGATaGCCCAGTGTCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKAEPPG*PSVTRC
Trigger: GCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGC...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGAGGAGGGCGGCTTCCTaGCTCTGGGCACCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQERRAAS*LWAPWF
Trigger: GAACCACGGTGCCCAGAGCCAGGAAGCCGCCCTCCT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGCAGATGGGAGAGTGCTaGGGCCAGGTACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKQMGEC*GQVPWE
Trigger: CTCCCAGGGTACCTGGCCCCAGCACTCTCCCATCTG...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCTGGAAAGTAGACCTTTaGCATTTCGACCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSWKVDL*HFDPHP
Trigger: TGGGTGAGGGTCGAAATGCCAAAGGTCTACTTTCCA...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGAGCGGGGCTGCTCCCTaGGCTGTTGTCATCACTCTT +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKSGAAP*AVVITL
Trigger: AAGAGTGATGACAACAGCCCAGGGAGCAGCCCCGCT...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCTGCTGACGGCGGCCTaGAGAACCGTGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCLLTAA*RTVCGC
Trigger: ACAGCCACACACGGTTCTCCAGGCCGCCGTCAGCAG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTATTCCCCCTGGCTTGCTaGACTCTTGGAAATGCGTCT +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVFPLAC*TLGNAS
Trigger: AGACGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAA...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGCTCCCTTCCCGTTCGTaGGTCACACAGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKLPSRS*VTQRQA
Trigger: TGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAG...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCAGCACATCGCCACTATaGGCATATTCCACATGCCTG +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSSTSPL*AYSTCL
Trigger: CAGGCATGTGGAATATGCTCATAGTGGCGATGTGCT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTGGCCAGCTGCTGGGCTaGGAAGTGGTCATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCGQLLG*EVVMAK
Trigger: TTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCC...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCTCGGTACTTGGCCCTaGGGACCTGGAAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCLGTWP*GPGSHW
Trigger: CCAGTGACTTCCAGGTCCTCAGGGCCAAGTACCGAG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCGCCAAGCGAGCCCCTaGAAAGGCTGTGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMRQASP*KGCGQP
Trigger: GGGCTGCCCACAGCCTTTTCAGGGGCTCGCTTGGCG...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACTGCAGATCATGGTCTaGAGTTTGAAAGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVLQIMV*SLKATS
Trigger: GCTGGTGGCTTTCAAACTTCAGACCATGATCTGCAG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTCTCACCCCCTCTGCATaGGCAAATGCAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREALTPSA*ANADGH
Trigger: GTGTCCATCTGCATTTGCTCATGCAGAGGGGGTGAG...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTCAGAGCACAGAAACATaGTCCAGATGCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAQSTET*SRCSRP
Trigger: GGGCCTGCTGCATCTGGATCATGTTTCTGTGCTCTG...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGCAGAAGCCCAGACCCTaGGTCCCTAGCGCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAQKPRP*VPSAGQ
Trigger: CTGCCCCGCGCTAGGGACTCAGGGTCTGGGCTTCTG...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCTCCCGGAGGCCTGCGTaGTGGAGCTGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPSRRPA*WSCASM
Trigger: CATCGAGGCACAGCTCCAGCACGCAGGCCTCCGGGA...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGGCGCCACAGCCTGCTTaGCTAAGTAATGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCEAPQPA*LSNGPP
Trigger: GGGTGGACCATTACTTAGGCAAGCAGGCTGTGGCGC...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTGCGCCACAGCCTGCTTaGCTAAGTAATGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPAPQPA*LSNGPP
Trigger: GGGTGGACCATTACTTAGGCAAGCAGGCTGTGGCGC...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAGGCCGTCCAAAGCCTTaGGGTTCTGGTCTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAGRPKP*GSGLGK
Trigger: CTTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCC...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTTCCCCTGGGCGCCTCTaGACCCTTCTGTCTACCAAT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSSPGRL*TLLSTN
Trigger: ATTGGTAGACAGAAGGGTGCAGAGGCGCCCAGGGGA...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGCCCAGTGTCACTCGATaGTCCATCTCTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCEPSVTR*SISLPA
Trigger: AGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGG...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCACGGGCCTTTCCTGTaGCGTGCTCACTCTGACACT +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPHGPFL*RAHSDT
Trigger: AGTGTCAGAGTGAGCACGGCACAGGAAAGGCCCGTG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAATGGAGACATGTCCCTaGAGCTCCTGGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAMETCP*SSWACR
Trigger: CCTGCAAGCCCAGGAGCTCCAGGGACATGTCTCCAT...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGCTGAGAAGTGGTCATaGCCAAAGGGTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSAEKWS*PKGFSR
Trigger: CCTTGAGAAACCCTTTGGCCATGACCACTTCTCAGC...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGGTCGGCGTCAGGCTGTaGAAGCTGTCTGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMVGVRL*KLSGFC
Trigger: GCAGAAGCCAGACAGCTTCCACAGCCTGACGCCGAC...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGGCAGGCCCTGGAAGTTaGACTCCGGGTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMAGPGS*TPGLRV
Trigger: CACTCTCAGACCCGGAGTCCAACTTCCAGGGCCTGC...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTGGTCGAAGCTGCTGTTaGCCACCAGGGCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSGRSCC*PPGLRS
Trigger: AGATCTCAGCCCTGGTGGCCAACAGCAGCTTCGACC...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACCGCCATCCAGGCCAGTaGGTGACTGTGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHRHPGQ*VTVGRG
Trigger: CCCTCTTCCCACAGTCACCCACTGGCCTGGATGGCG...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGATGCGGCGGTGTGGCTaGGAGGGGCTCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMMRRCG*EGLVVS
Trigger: GCTGACCACGAGCCCCTCCCAGCCACACCGCCGCAT...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTGCTCATGCGGCGGTGTaGCTGGGAGGGGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLAHAAV*LGGARG
Trigger: ACCACGAGCCCCTCCCAGCCACACCGCCGCATGAGC...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGCAGAGCCGCCTGGATaGCCCAGTGTCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEAEPPG*PSVTRC
Trigger: GCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGCTAGCTCCTGTCTGGTaGGAGCAGAGCCGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKLAPVW*EQSRLD
Trigger: ATCCAGGCGGCTCTGCTCCCACCAGACAGGAGCTAG...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGCTAGCTCCTGTCTGGTaGGAGCAGAGCCGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMLAPVW*EQSRLD
Trigger: ATCCAGGCGGCTCTGCTCCCACCAGACAGGAGCTAG...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTGGTGGCCAGAGTAAGTaGTGTGAACAAGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPGGQSK*CEQEPR
Trigger: CCGGGGCTCTTGTTCACACCACTTACTCTGGCCACC...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCACTGGGCTCCAGCCTaGGCGACAGAGACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCHWAPA*ATETLS
Trigger: AGACAGAGTCTCTGTCGCCCAGGCTGGAGCCCAGTG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGCGGCTTCCTGGCTCTaGGCACCGTGGTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEAASWL*APWFCP
Trigger: AGGACAGAACCACGGTGCCCAGAGCCAGGAAGCCGC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCCTCGAGGGACTAGTCTaGAATAGTAGGCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSLEGLV*NSRPNG
Trigger: ACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAG...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGTCGTCCGGTCACTGTaGCCACCTCACCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEVVRSL*PPHPRH
Trigger: GTGACGAGGGTGAGGTGGCCACAGTGACCGGACGAC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCATGGCCTATGATGTCTaGAGACCGCAGATCTTCACC +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLMAYDV*RPQIFT
Trigger: GGTGAAGATCTGCGGTCTCCAGACATCATAGGCCAT...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACGCCGGCTCTTCCCGGTaGACAGAACTAGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHAGSSR*TELGGA
Trigger: TGCCCCTCCTAGTTCTGTCCACCGGGAAGAGCCGGC...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTCTTGCTGCTTGGCAATaGGTGGCTCTCATGCCCACA +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREALAAWQ*VALMPT
Trigger: TGTGGGCATGAGAGCCACCCATTGCCAAGCAGCAAG...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTGCCGGCAGCTACTGTTaGTGTTGCGGGCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPAGSYC*CCGQCL
Trigger: AAGACATTGCCCGCAACATCAACAGTAGCTGCCGGC...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGCCCTCTCTGGGGCCTaGCTGTGGGATAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEALSGA*LWDRRF
Trigger: GAACCTTCTATCCCACAGTCAGGCCCCAGAGAGGGC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCATCTCTGGAATGTCCTaGTTATCTGCACCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSISGMS*LSAPSV
Trigger: CACACTGGGTGCAGATAATCAGGACATTCCAGAGAT...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGGAGAGAGGAGGGAAATaGAATCCGGCACAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMERGGK*NPAQGL
Trigger: CAGCCCCTGTGCCGGATTTCATTTCCCTCCTCTCTC...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTGGGTCACATGGCCTATaGTGTCTGGAGACCGCAGAT +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPGSHGL*CLETAD
Trigger: ATCTGCGGTCTCCAGACATCATAGGCCATGTGACCC...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAACGGCACTGCCCCTCTaGAGGCCCCGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSTALPL*RPRSAW
Trigger: CCAGGCGCTGCGGGGCCTGCAGAGGGGCAGTGCCGT...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGGCTTCTGCAGCTCTCTaGGCACCTGCTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCEASAAL*APAHCK
Trigger: CTTACAGTGAGCAGGTGCGCAGAGAGCTGCAGAAGC...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTGCTTCTGCAGCTCTCTaGGCACCTGCTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSASAAL*APAHCK
Trigger: CTTACAGTGAGCAGGTGCGCAGAGAGCTGCAGAAGC...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCTGCGCCGCGGCCCAGTaGTTTTCGCTCTGCACACAG +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPCAAAQ*FSLCTQ
Trigger: CTGTGTGCAGAGCGAAAAGCACTGGGCCGCGGCGCA...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGAGCTGCTCCGGCTGCTaGTGGGAAAAGAACAACCGG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMSCSGC*WEKNNR
Trigger: CCGGTTGTTCTTTTCCCAGCAGCAGCCGGAGCAGCT...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGAGCCGCTGCTGCAGGTaGACAGGCATGGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGSRCCR*TGMGWM
Trigger: CATCCACCCCATGCCTGTGCACCTGCAGCAGCGGCT...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGCCCAGTGTCACTCGATaGTCCATCTCTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMPSVTR*SISLPA
Trigger: AGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGG...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCCAGAAAAGCAGGTATTaGTGGCCCATGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLQKSRY*WPMASQ
Trigger: TTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTG...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTGCACAGATCGGTGGTaGATCCGAGGCAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHCTDRW*IRGRAE
Trigger: CTCAGCCCTGCCTCGGATGCACCACCGATCTGTGCA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGCTCCCACACCCACTCTaGACAGATCGGTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMLPHPL*TDRWCI
Trigger: GATGCACCACCGATCTGTGCAGAGTGGGTGTGGGAG...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCTGGGAGGCAAAGTTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCLGGKV*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAAACTTTGCCTCCCAG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCAAATTCTTCCGGCCATaGAAGATATGGGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: AGPRREGRHGRRKAQERSKFFRP*KIWDKR
Trigger: CCTCTTATCCCATATCTTCCATGGCCGGAAGAATTT...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGGGTCGAAGCTGCTGTTaGCCACCAGGGCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMGRSCC*PPGLRS
Trigger: AGATCTCAGCCCTGGTGGCCAACAGCAGCTTCGACC...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGGGTGGCCAGAGTAAGTaGTGTGAACAAGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMGGQSK*CEQEPR
Trigger: CCGGGGCTCTTGTTCACACCACTTACTCTGGCCACC...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGCCCTTCTGCCATTTATaGGCCCCTAAGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKPFCHL*APKCTR
Trigger: ACGTGTGCACTTAGGGGCCCATAAATGGCAGAAGGG...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTATTCCACAAAAACCAGTaGGGTTCCCCTCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVFHKNQ*GSPLWK
Trigger: TTTCCAGAGAGGGGAACCCCACTGGTTTTTGTGGAA...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGTTGTGCTCTGCACAGTaGCTGGGTGCCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKLCSAQ*LGAMSL
Trigger: CAAGGACATGGCACCCAGTCACTGTGCAGAGCACAA...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGGCCCTCTCTGGGGCCTaGCTGTGGGATAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGALSGA*LWDRRF
Trigger: GAACCTTCTATCCCACAGTCAGGCCCCAGAGAGGGC...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGTGTCACCTCAGTGGGTaGTTTAACTGGATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QCSPFPFVGHTETGTSPACHLSG*FNWIFP
Trigger: AGGAAAGATCCAGTTAAATCACCCACTGAGGTGACA...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAAGAGGAGTCGGTTCCTaGAGAACAGATGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEARGVGS*RTDGRV
Trigger: CACTCTCCCATCTGTTCTTCAGGAACCGACTCCTCT...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCCTAGAGATGCTGACTaGCAAGGTCTCCCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPPRDAD*QGLPKE
Trigger: CTCCTTTGGGAGACCTTGTCAGTCAGCATCTCTAGG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGCTGCCAGGTGCTGGTaGGGCTGGAAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEAARCW*GWKNFL
Trigger: AAGGAAGTTCTTCCAGCCTCACCAGCACCTGGCAGC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGTGCGTGCTGGAGCTGTaGCTCGATGTCCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMCVLEL*LDVLVQ
Trigger: CTGAACAAGGACATCGAGGCACAGCTCCAGCACGCA...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGAAGTAGAAGATCCTaGCAGCCTCCCGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHRSRRS*QPPGGL
Trigger: CAGGCCTCCGGGAGGCTGGCAGGATCTTCTACTTCT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACGGCCGTCCAAAGCCTTaGGGTTCTGGTCTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHGRPKP*GSGLGK
Trigger: CTTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCC...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGACGGCACTGCCCCTCTaGAGGCCCCGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILTALPL*RPRSAW
Trigger: CCAGGCGCTGCGGGGCCTGCAGAGGGGCAGTGCCGT...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCAATCGGACAGAGGGCTaGCGAAAAGGCGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPNRTEG*RKGGAQ
Trigger: CTGGGCTCCGCCTTTTCGGCAGCCCTCTGTCCGATT...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTACCAATACACAGAGCTaGCGGTCAAAGGCATCGGGA +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPTNTQS*RSKASG
Trigger: TCCCGATGCCTTTGACCGGCAGCTCTGTGTATTGGT...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTACCAATACACAGAGCTaGCGGTCAAAGGCATCGGGA +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSTNTQS*RSKASG
Trigger: TCCCGATGCCTTTGACCGGCAGCTCTGTGTATTGGT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGAACAGATGGGAGAGTaGTGGGGCCAGGTACCCTGG +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPEQMGE*WGQVPW
Trigger: CCAGGGTACCTGGCCCCAGCACTCTCCCATCTGTTC...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACGCCTGCCCTTCATCCTaGAGGGGTACTTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHACPSS*RGTWAC
Trigger: ACATGCCCAAGTACCCCTGCAGGATGAAGGGCAGGC...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGGGAGACTGCCCAGTGTaGTGCAAAAGGAAAACCAAC +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKGDCPV*CKRKTN
Trigger: GTTGGTTTTCCTTTTGCAGCACACTGGGCAGTCTCC...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGTGCTCAGCAACAAGCTaGGAGATCCTCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKCSATS*EILSFS
Trigger: TGAGAAGCTGAGGATCTCGCAGCTTGTTGCTGAGCA...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTACATCCCCAGCGCTTTaGAAACAGAAGCGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSTSPAL*KQKRSQ
Trigger: TTGGGAGCGCTTCTGTTTGCAAAGCGCTGGGGATGT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTTGCTCCACTCTGACCTaGCCGGCTGGAATCACAGTT +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCCSTLT*PAGITV
Trigger: AACTGTGATTCCAGCCGGGCAGGTCAGAGTGGAGCA...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTTTCCACATGCCTGGGTaGCAGTTAAAAGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAFHMPG*QLKGSA
Trigger: AGCAGAGCCTTTTAACTGGCACCCAGGCATGTGGAA...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602477.1
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACATGGAGACATGTCCCTaGAGCTCCTGGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHMETCP*SSWACR
Trigger: CCTGCAAGCCCAGGAGCTCCAGGGACATGTCTCCAT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGCGGAGGCCTGCGTGCTaGAGCTGTGCCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRERRPAC*SCASMS
Trigger: GGACATCGAGGCACAGCTCCAGCACGCAGGCCTCCG...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTAAAGCCTTGCGGTTCTaGTCTCGGAAAGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPKALRF*SRKGRI
Trigger: GATCCTGCCTTTCCGAGACCAGAACCGCAAGGCTTT...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGAGGCGTGGGGCCTTATaGGCCAGGCTCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKARRGAL*ARLSSR
Trigger: TCTGCTGGAGAGCCTGGCCCATAAGGCCCCACGCCT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTAGCCATAGTGCGCCGTaGCCAGCTGCTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLSHSAP*PAAGTG
Trigger: CCCTGTTCCAGCAGCTGGCCACGGCGCACTATGGCT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGGCAGGTGCACAGGCATaGGGTGGATGTTGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKAGAQA*GGCCSR
Trigger: CCTACTACAACATCCACCCCATGCCTGTGCACCTGC...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGGCAGGTGCACAGGCATaGGGTGGATGTTGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMAGAQA*GGCCSR
Trigger: CCTACTACAACATCCACCCCATGCCTGTGCACCTGC...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGACTGCACAGCCAGGATaGAGGAGACAGGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKTAQPG*RRQGWQ
Trigger: TTGCCATCCCTGTCTCCTCCATCCTGGCTGTGCAGT...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTACCCAGTGTGCTTCCTaGAGGAAGGCTAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCTQCAS*RKASRT
Trigger: TGTCCTGCTAGCCTTCCTCCAGGAAGCACACTGGGT...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGTGTCAGAGCCCTCCTTaGGGGCTTCAGAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMCQSPP*GLQKSR
Trigger: CCTGCTTTTCTGAAGCCCCCAAGGAGGGCTCTGACA...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGATGCTCTGTCTGGCCTaGGTTGTTGTTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMMLCLA*VVVGGQ
Trigger: CTGGCCACCAACAACAACCCAGGCCAGACAGAGCAT...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCACTATGTTGCCCAGGCTaGTTTCAACCTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEALCCPG*FQPSGL
Trigger: GAGCCCAGAAGGTTGAAACCAGCCTGGGCAACATAG...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGAATGCAGATGGACACTaGACTGTGCCGACTGACACC +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCENADGH*TVPTDT
Trigger: GGTGTCAGTCGGCACAGTCCAGTGTCCATCTGCATT...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGTCTGACCTGCCCGGCTaGAATCACAGTTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQESDLPG*NHSSHS
Trigger: GGAGTGGGAACTGTGATTCCAGCCGGGCAGGTCAGA...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 72 bp TCTTCACCCTCTGGAGTCTCATTTGCAGAGTCTCATTaGTCGTCCGGTCACTGTGGCCACCTCACCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SSPSGVSFAESH*SSGHCGHLTLV
Trigger: GACGAGGGTGAGGTGGCCACAGTGACCGGACGACAAATGAGACTCTGCAAATGAGACTCCAGAGGGTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 72 bp CTGGAGACCGCAGATCTTCACCCTCTGGAGTCTCATTaGCAGAGTCTCATTTGTCGTCCGGTCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LETADLHPLESH*QSLICRPVTVA
Trigger: GGCCACAGTGACCGGACGACAAATGAGACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTGCGGTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTAGCACATCGCCACTATaGGCATATTCCACATGCCTG +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPSTSPL*AYSTCL
Trigger: CAGGCATGTGGAATATGCTCATAGTGGCGATGTGCT...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGGAGGACGTCGCGAATaGCACCGTACTCCTCATAGA +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEGGRRE*HRTPHR
Trigger: TCTATGAGGAGTACGGTGTCATTCGCGACGTCCTCC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGTGCCAGACATCAGGATaGAAGGCACGCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMCQTSG*KARPPS
Trigger: GCTGGGAGGGCGTGCCTTTCATCCTGATGTCTGGCA...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGGGCTCACCAGCGTGGTaGTCTCACGCTTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMGSPAW*SHASSC
Trigger: GCAGGATGAAGCGTGAGATCACCACGCTGGTGAGCC...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGAACAAGAGGGGCTATTaGGAGCGGAAACACCCATCC +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMNKRGY*ERKHPS
Trigger: GGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTT...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCAAGTTTATATCTGCCTaGTCCAGAGAGCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLKFISA*SREQVE
Trigger: TTCCACTTGCTCTCTGGATCAGGCAGATATAAACTT...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGTTTGCAGAAGGCACTTaGTTCTGGAAAGTAGACCTT +
Preference number: 4 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAFAEGT*FWKVDL
Trigger: AAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAA...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGCCAGGTCCCCAGTTaGTCCCAGCAGGATTATGGA +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHSQVPS*SQQDYG
Trigger: TCCATAATCCTGCTGGGAGCAACTGGGGACCTGGCT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGCTGATCCTTGTGCTCTaGACAGTGACTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMLILVL*TVTGCH
Trigger: ATGGCACCCAGTCACTGTGCAGAGCACAAGGATCAG...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCGGAAAGGCAGGATCTaGGCCACAGCCTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLRKGRI*ATACLP
Trigger: AGGCAAGCAGGCTGTGGCGCAGATCCTGCCTTTCCG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGATGTGGAAGACGAGCTaGCGGGGCAGGCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSREMWKTS*RGRHWL
Trigger: GAGCCAGTGCCTGCCCCGGCAGCTCGTCTTCCACAT...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAGCGCAGAGCCGCTGCTaGAGGTGCACAGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSAQSRC*RCTGMG
Trigger: CCCCATGCCTGTGCACCTGCAGCAGCGGCTCTGCGC...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGGCCCATGACCAGGACTaGCACCTTCTTGGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAAHDQD*HLLGAV
Trigger: AACCGCGCCAAGAAGGTGGCAGTCCTGGTCATGGGC...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCAAGACAGTCCCCAATaGCCCTGCTTTGCACGGGGC +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLQDSPQ*PCFARG
Trigger: GCCCCGTGCAAAGCAGGGGCATTGGGGACTGTCTTG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGAAACCGACTTTGCCATaGTCCCTCACCCAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCEKPTLP*SLTQES
Trigger: GCTTTCTTGGGTGAGGGAGCATGGCAAAGTCGGTTT...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAAGAGGCAAACAGCCTaGCTGGGAACACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHKRQTA*LGTQCW
Trigger: CCAGCACTGTGTTCCCAGGCAGGCTGTTTGCCTCTT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAAGGAGGGGCCCTTCTaGCATTTATGGGCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHKEGPF*HLWAPK
Trigger: CTTAGGGGCCCATAAATGGCAGAAGGGCCCCTCCTT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGCAGTGCCGCTTCCAGTaGTACCCACACGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSREQCRFQ*YPHGCS
Trigger: GCTGCACCCGTGTGGGTAGCACTGGAAGCGGCACTG...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGCATATTCCACATGCCTaGGTGCTTCCTCTCGCGCGG +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGHIPHA*VLPLAR
Trigger: CCGCGCGAGAGGAAGCACCCAGGCATGTGGAATATG...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTTCATCCAGGTACAGCTaGAACAGTCCCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSSSRYS*NSPCHK
Trigger: CTTATGGCAGGGACTGTTCCAGCTGTACCTGGATGA...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTAGGTCCCGAGTTCTGTaGCCAGCTGCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLRSRVL*PAAGLR
Trigger: TCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGTACATCTCCTCCTCCTaGAAAAAGGTCCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKYISSS*KKVPSS
Trigger: AGAACTCGGGACCTTTTTCCAGGAGGAGGAGATGTA...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGTCCGTCAGATGGTTCTaGAGGACGTCGCGAATGACA +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKSVRWF*RTSRMT
Trigger: TGTCATTCGCGACGTCCTCCAGAACCATCTGACGGA...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCGGCCATGGAAGATATaGGATAAGAGGACGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCRPWKI*DKRTEW
Trigger: CCACTCCGTCCTCTTATCCCATATCTTCCATGGCCG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGCGGCCATGGAAGATATaGGATAAGAGGACGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMRPWKI*DKRTEW
Trigger: CCACTCCGTCCTCTTATCCCATATCTTCCATGGCCG...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGGCAGGCCCTGGAAGTTaGACTCCGGGTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMAGPGS*TPGLRV
Trigger: CACTCTCAGACCCGGAGTCCAACTTCCAGGGCCTGC...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGGGGCTGAGATCTCCCTaGCATAGATCTGGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMGLRSP*HRSGRP
Trigger: AGGGCGCCCAGATCTATGCCAGGGAGATCTCAGCCC...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGATGTACCACACCAGCTaGCCGGAGTGCGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMMYHTS*PECGRT
Trigger: TGTCCTGCCGCACTCCGGCCAGCTGGTGTGGTACAT...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTGTGAACGCCGGAGTTTaGGCGCCATCCCGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLVNAGV*APSRVV
Trigger: CACAACACGGGATGGCGCCCAAACTCCGGCGTTCAC...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTGGCAATGTACTCCCCTaGGCGCCTCTGCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLGNVLP*APLHPS
Trigger: AGAAGGGTGCAGAGGCGCCCAGGGGAGTACATTGCC...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGTGGAGGAGACAGGGATaGCAAGCGGGAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAWRRQG*QAGAGG
Trigger: TCCACCTGCTCCCGCTTGCCATCCCTGTCTCCTCCA...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTGGTATTGCTGGCCCATaGCTTCTCAAGATCACAGTC +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSGIAGP*LLKITV
Trigger: GACTGTGATCTTGAGAAGCCATGGGCCAGCAATACC...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGACAAGAGCCCCGGCTTaGGAACATGTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQETRAPA*EHVSDW
Trigger: CCAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACATGCTCTGTCTGGCCTaGGTTGTTGTTGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHMLCLA*VVVGGQ
Trigger: CTGGCCACCAACAACAACCCAGGCCAGACAGAGCAT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAAAGAGATGCTCTGTCTaGCCTGGGTTGTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAKRCSV*PGLLLV
Trigger: CACCAACAACAACCCAGGCCAGACAGAGCATCTCTT...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTAAGAGATGCTCTGTCTaGCCTGGGTTGTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPKRCSV*PGLLLV
Trigger: CACCAACAACAACCCAGGCCAGACAGAGCATCTCTT...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGTTTGGGAGGCTGAGGTaGGTAGACTGCCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEFGRLR*VDCLSS
Trigger: TGAGCTCAGGCAGTCTACCCACCTCAGCCTCCCAAA...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCTCCTGCAGGGGTACTTaGGCATGTGGAGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPSCRGT*ACGGPF
Trigger: AAAGGGGCCTCCACATGCCCAAGTACCCCTGCAGGA...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGAGCCCTGCATATTTTaGAAGGGAACCCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEEPCIF*KGTPRG
Trigger: CCCTCGAGGGGTTCCCTTCCAAAATATGCAGGGCTC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGGAGGACGTCGCGAATaGCACCGTACTCCTCATAGA +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPGGRRE*HRTPHR
Trigger: TCTATGAGGAGTACGGTGTCATTCGCGACGTCCTCC...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGCTCGGTACTTGGCCCTaGGGACCTGGAAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRELGTWP*GPGSHW
Trigger: CCAGTGACTTCCAGGTCCTCAGGGCCAAGTACCGAG...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGTCACGTCTCCTCTTGTaGACGCCGGAGTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: HLREMEASWVPDDFQLIQSRLLL*TPEFGR
Trigger: GCGCCCAAACTCCGGCGTTCACAAGAGGAGACGTGA...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTATCTCTGGAATGTCCTaGTTATCTGCACCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSISGMS*LSAPSV
Trigger: CACACTGGGTGCAGATAATCAGGACATTCCAGAGAT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTCCAACCTATGCTCACTaGGAAGATACCCGCTTACTT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSPTYAH*EDTRLL
Trigger: AAGTAAGCGGGTATCTTCTCAGTGAGCATAGGTTGG...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGGAGAGAGGAGGGAAATaGAATCCGGCACAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMERGGK*NPAQGL
Trigger: CAGCCCCTGTGCCGGATTTCATTTCCCTCCTCTCTC...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTAAGAGGCAGCTCCCATaGCTGAGTTACAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCKRQLP*LSYNAW
Trigger: CCAAGCATTGTAACTCAGTCATGGGAGCTGCCTCTT...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTGTGCTGATGACAGCATaGGCCCGGTTGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLVLMTA*ARLHLA
Trigger: AGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCAC...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTAGCTGGAACAGTCCCTaGCATAAGTACTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPSWNSP*HKYFLA
Trigger: GGCTAAGAAGTACTTATGGCAGGGACTGTTCCAGCT...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTAAGCTGTCTGGCTTCTaGAGCTCTCTGCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLKLSGF*SSLRTC
Trigger: GCAGGTGCGCAGAGAGCTGCAGAAGCCAGACAGCTT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGGGGATCCGGACGTGCTaGAGCAGGTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILGIRTC*SRWACR
Trigger: CCTGCAGGCCCACCTGCTGCAGCACGTCCGGATCCC...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCAGAAAAGCAGGTATTaGTGGCCCATGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: WPSVTRCSISLPANELSPQKSRY*WPMASQ
Trigger: TTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGGAACAGATGGGAGAGTaGTGGGGCCAGGTACCCTGG +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSREEQMGE*WGQVPW
Trigger: CCAGGGTACCTGGCCCCAGCACTCTCCCATCTGTTC...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACACACGTGGGCTTCCATaGGGATGGAATCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHTRGLP*GWNHWS
Trigger: GGACCAATGATTCCATCCGCATGGAAGCCCACGTGT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTCTCTGGAGTCTCATTTaGAGAGTCTCATTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREALWSLI*RVSFVV
Trigger: GACGACAAATGAGACTCTGCAAATGAGACTCCAGAG...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGATGGACACTGGACTGTaGCGACTGACACCGGGACTC +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMMDTGL*RLTPGL
Trigger: GAGTCCCGGTGTCAGTCGGCACAGTCCAGTGTCCAT...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGACCAACAACAGGGAGTaGCCAACTCACCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKATNNRE*PTHPLC
Trigger: GCAGAGGGGGTGAGTTGGGCACTCCCTGTTGTTGGT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGTGGGAGGGGGAGCTCTaGTCTAAAGCAGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGWEGEL*SKAEGT
Trigger: TGTGCCTTCTGCTTTAGAGCAGAGCTCCCCCTCCCA...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGGTCCTTCCTCCTGCATaGAGGCGCCCCGTAACGCTT +
Preference number: 4 (lower is better)
Translates to: HLREMEASWVPDDFQLIQVLPPA*RRPVTL
Trigger: AAGCGTTACGGGGCGCCTGCATGCAGGAGGAAGGAC...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGAATGGGTGGCTCTCATaGCCACACCTCTCCACCCAA +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGNGWLS*PHLSTQ
Trigger: TTGGGTGGAGAGGTGTGGGCATGAGAGCCACCCATT...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCACGAACATTCTTGCTaGTTGGCAATGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCHEHSC*LAMGGS
Trigger: AGAGCCACCCATTGCCAAGCAGCAAGAATGTTCGTG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCAAGCGGAAGAGGCGTaGAGCTGTCCCCATACAGAC +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMQAEEA*SCPHTD
Trigger: GTCTGTATGGGGACAGCTGCACGCCTCTTCCGCTTG...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602477.1
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACCTCCCAGCAGGATTATaGAGACATGTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHLPAGL*RHVPGA
Trigger: AGCTCCAGGGACATGTCTCCATAATCCTGCTGGGAG...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTTCATCCAGGTACAGCTaGAACAGTCCCTGCCATAAG +
Preference number: 4 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCSSRYS*NSPCHK
Trigger: CTTATGGCAGGGACTGTTCCAGCTGTACCTGGATGA...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGCCAGGCGCCCGGGCCTaGCCGGCAGCTACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILPGARA*PAATVD
Trigger: ATCAACAGTAGCTGCCGGCCAGGCCCGGGCGCCTGG...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGTGCTGGGCTGAGAAGTaGTCATGGCCAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQECWAEK*SWPKGF
Trigger: GAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCA...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGAAGGCGGAGCCCAGGTaGTCCCTCCATTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMKAEPR*SLHFLP
Trigger: TGGAAGGAAATGGAGGGACCACCTGGGCTCCGCCTT...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGTGCTCCGGCTGCTGCTaGGAAAAGAACAACCGGCCG +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRECSGCC*EKNNRP
Trigger: CGGCCGGTTGTTCTTTTCCCAGCAGCAGCCGGAGCA...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGGAAGTCACTGGGCATTaGGGCCGGCCCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILEVTGH*GRPWPW
Trigger: CCAGGGCCAGGGCCGGCCCCAATGCCCAGTGACTTC...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACCCAGCCTTAAGTTGTaGGATACTGAACAAACAAAA +
Preference number: 4 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVPSLKL*DTEQTK
Trigger: TTTTGTTTGTTCAGTATCCCACAACTTAAGGCTGGG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGGATCCAGAGAGCAAGTaGAAGGTGCGGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGDPESK*KVRRSQ
Trigger: CTGGCTTCTCCGCACCTTCCACTTGCTCTCTGGATC...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGCTCTGCACAGATCGGTaGTGCATCCGAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRELCTDR*CIRGRA
Trigger: AGCCCTGCCTCGGATGCACCACCGATCTGTGCAGAG...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGGGCAAACAGCCTGCCTaGGAACACAGTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGGKQPA*EHSAGT
Trigger: AGTTCCAGCACTGTGTTCCCAGGCAGGCTGTTTGCC...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGCTGGAGAACCGTGTGTaGCTGTTCCTGGATGACATC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQELENRV*LFLDDI
Trigger: GATGTCATCCAGGAACAGCCACACACGGTTCTCCAG...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGCGCTCCCAAAAGTTaGCTAGAGGGTACACTTCGG +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHSAPKS*LEGTLR
Trigger: CCGAAGTGTACCCTCTAGCCAACTTTTGGGAGCGCT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGAAAAGGCATTTGTTCTaGCCAGGCATGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEKRHLF*PGMVAP
Trigger: GGGAGCCACCATGCCTGGCCAGAACAAATGCCTTTT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 72 bp TCCCCAGCGCTTTGCAAACAGAAGCGCTCCCAAAAGTaGGCTAGAGGGTACACTTCGGCAAAGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: SPALCKQKRSQK*ARGYTSAKGSS
Trigger: AGATGATCCCTTTGCCGAAGTGTACCCTCTAGCCAACTTTTGGGAGCGCTTCTGTTTGCAAAGCGCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGGTTGGCCACCAGGGCTaGGATCTCCCTGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSREVGHQG*DLPGID
Trigger: ATCTATGCCAGGGAGATCTCAGCCCTGGTGGCCAAC...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTCCGTGTTGTGCTGGTTaGTATGAATGTGTAACTGCT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSPCCAG*YECVTA
Trigger: AGCAGTTACACATTCATATCAACCAGCACAACACGG...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCATCCGGGAGTCCCCTaGGATGGAAATGACCCTCTT +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLHPGVP*DGNDPL
Trigger: AAGAGGGTCATTTCCATCTCAGGGGACTCCCGGATG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTTGTCACCTCAGTGGGTaGTTTAACTGGATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSCHLSG*FNWIFP
Trigger: AGGAAAGATCCAGTTAAATCACCCACTGAGGTGACA...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTTTTGCAGAAGGCACTTaGTTCTGGAAAGTAGACCTT +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAFAEGT*FWKVDL
Trigger: AAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAA...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGAGGCAAAGTTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRERQSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAACTTTGCCT...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTAGTTCTGTGGCCAGCTaGTGGGCTGAGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLSSVAS*WAEKWS
Trigger: TGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCAGTGCTTTTCGCTCTaGACACAGCAGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLQCFSL*TQQAWF
Trigger: GAACCAGGCCTGCTGTGTGCAGAGCGAAAAGCACTG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGAGCCGCTGCTGCAGGTaGACAGGCATGGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKSRCCR*TGMGWM
Trigger: CATCCACCCCATGCCTGTGCACCTGCAGCAGCGGCT...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGACAGTCCCCAACCTATaGTCACTGAGAAGATACCCG +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQETVPNL*SLRRYP
Trigger: CGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGCTCCCACACCCACTCTaGACAGATCGGTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRELPHPL*TDRWCI
Trigger: GATGCACCACCGATCTGTGCAGAGTGGGTGTGGGAG...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGCCTTCCTATGTACAATaGAAACAGTGCCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMPSYVQ*KQCRFQ
Trigger: CTGGAAGCGGCACTGTTTGCATTGTACATAGGAAGG...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCACAGGCTCTGACTCGCTaGCAGGTGCTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSQALTR*QVLVRL
Trigger: CAGCCTCACCAGCACCTGGCAGCGAGTCAGAGCCTG...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGTCCACCCGCTCCACATaGTGCCGGTTCCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILSTRST*CRFQRP
Trigger: CGGCCTCTGGAACCGGCACCATGTGGAGCGGGTGGA...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGAGGCGTGGGGCCTTATaGGCCAGGCTCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKRRGAL*ARLSSR
Trigger: TCTGCTGGAGAGCCTGGCCCATAAGGCCCCACGCCT...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAAGTGCCAGGTGGAACTaGCCAAAGCGCCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSSARWN*PKRRTA
Trigger: AGCCGTGCGGCGCTTTGGCCAGTTCCACCTGGCACT...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGTGGGCCTGCAGGCCCTaGAAGTTGGACTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKWACRP*KLDSGS
Trigger: AGACCCGGAGTCCAACTTCCAGGGCCTGCAGGCCCA...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGGCTGGGAGGGGCTCGTaGTCAGCACGACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILAGRGS*SARPAA
Trigger: AGCAGCTGGTCGTGCTGACCACGAGCCCCTCCCAGC...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTACAAGAGCCCCGGCTTaGGAACATGTCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLTRAPA*EHVSDW
Trigger: CCAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCACAGTGCTGGAACTTaGGACTTGGGTTCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLHSAGT*DLGSER
Trigger: CCGCTCAGAACCCAAGTCCCAAGTTCCAGCACTGTG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGAGCCCTGCAGGTTTTTaGGAAGCGTCTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRESPAGF*EASPSL
Trigger: CAGGGAGGGAGACGCTTCCCAAAAACCTGCAGGGCT...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGACACTTGCTGGTCAGTaGACGAGAGGTAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQETLAGQ*TRGKSR
Trigger: CCTGCTTTTACCTCTCGTCCACTGACCAGCAAGTGT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTTGCTGCCTTCCCCGGTaGACAGATTTTGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLCCLPR*TDFAGK
Trigger: CTTCCCTGCAAAATCTGTCCACCGGGGAAGGCAGCA...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGAACATTCTTGCTGCTTaGCAATGGGTGGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: KQEGLLRAETPIRESPEMNILAA*QWVALM
Trigger: CATGAGAGCCACCCATTGCCAAGCAGCAAGAATGTT...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGAAAATTTGCTGGGCATaGTGGTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCEKICWA*WCNPSY
Trigger: GTAGCTGGGATTACACCACCATGCCCAGCAAATTTT...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGTTGGCCATGAGCTCTTaGCCCTGCTTGGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKLAMSS*PCLGAV
Trigger: GACAGCCCCCAAGCAGGGTCAAGAGCTCATGGCCAA...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGAGCGCCTGGAAGACCTaGAGCTTGTGCCGCAGCACA +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKSAWKT*SLCRST
Trigger: TGTGCTGCGGCACAAGCTTCAGGTCTTCCAGGCGCT...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGGGCTCACCAGCGTGGTaGTCTCACGCTTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKGSPAW*SHASSC
Trigger: GCAGGATGAAGCGTGAGATCACCACGCTGGTGAGCC...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCATCACGTCTCCTCTTGTaGACGCCGGAGTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSSRLLL*TPEFGR
Trigger: GCGCCCAAACTCCGGCGTTCACAAGAGGAGACGTGA...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGTCTATAAATGGAGTCTaGAGAACAGCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKSINGV*RTAKTQ
Trigger: CTGTGTCTTTGCTGTTCTTCAGACTCCATTTATAGA...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTTCTATAAATGGAGTCTaGAGAACAGCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREASINGV*RTAKTQ
Trigger: CTGTGTCTTTGCTGTTCTTCAGACTCCATTTATAGA...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACCCAACCTATGCTCACTaGGAAGATACCCGCTTACTT +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHPTYAH*EDTRLL
Trigger: AAGTAAGCGGGTATCTTCTCAGTGAGCATAGGTTGG...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTTTTGTCCCCAGATTTTaGTCTAGCTTAAAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KIRQACWPAPVVAATREAFVPRF*SSLKSL
Trigger: AAGGGACTTTAAGCTAGATCAAAATCTGGGGACAAA...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGTCTGTGGGGGTAAAGTaGAGGACCCAAAGCGACACA +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKASVGVK*RTQSDT
Trigger: TGTGTCGCTTTGGGTCCTTCACTTTACCCCCACAGA...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGAGCCAGGTCCCCAGTTaGTCCCAGCAGGATTATGGA +
Preference number: 4 (lower is better)
Translates to: HLREMEASWVPDDFQLIQSQVPS*SQQDYG
Trigger: TCCATAATCCTGCTGGGAGCAACTGGGGACCTGGCT...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGCTGATCCTTGTGCTCTaGACAGTGACTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKALILVL*TVTGCH
Trigger: ATGGCACCCAGTCACTGTGCAGAGCACAAGGATCAG...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGTGCGTGCTGGAGCTGTaGCTCGATGTCCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: HLREMEASWVPDDFQLIQCVLEL*LDVLVQ
Trigger: CTGAACAAGGACATCGAGGCACAGCTCCAGCACGCA...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAAATCGGACAGAGGGCTaGCGAAAAGGCGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSNRTEG*RKGGAQ
Trigger: CTGGGCTCCGCCTTTTCGGCAGCCCTCTGTCCGATT...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGGCCCATGACCAGGACTaGCACCTTCTTGGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKAHDQD*HLLGAV
Trigger: AACCGCGCCAAGAAGGTGGCAGTCCTGGTCATGGGC...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCCAACTCACCCCCTCTaGATGAGCAAATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLPTHPL*MSKCRW
Trigger: CCATCTGCATTTGCTCATGCAGAGGGGGTGAGTTGG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTATCTTCCCCCTGGCTTaGTGGACTCTTGGAAATGCG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLIFPLA*WTLGNA
Trigger: CGCATTTCCAAGAGTCCAGCAAGCCAGGGGGAAGAT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAGCTCTTGACCCTGCTTaGGGGCTGTCAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSALDPA*GLSEQL
Trigger: GAGCTGCTCTGACAGCCCCCAAGCAGGGTCAAGAGC...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTACATCTCCTCCTCCTaGAAAAAGGTCCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHYISSS*KKVPSS
Trigger: AGAACTCGGGACCTTTTTCCAGGAGGAGGAGATGTA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCTGCACACAGCAGGCCTaGTTCTTGAACAAGATCCGA +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPCTQQA*FLNKIR
Trigger: TCGGATCTTGTTCAAGAACCAGGCCTGCTGTGTGCA...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGCGCCATCCAGGCCAGTaGGTGACTGTGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILRHPGQ*VTVGRG
Trigger: CCCTCTTCCCACAGTCACCCACTGGCCTGGATGGCG...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGGGCAATGTACTCCCCTaGGCGCCTCTGCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKGNVLP*APLHPS
Trigger: AGAAGGGTGCAGAGGCGCCCAGGGGAGTACATTGCC...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGATGACCCTCTTAAATTaGGGATCTCTGGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCEMTLLN*GSLECP
Trigger: AGGACATTCCAGAGATCCCCAATTTAAGAGGGTCAT...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTATGACCCTCTTAAATTaGGGATCTCTGGAATGTCCT +
Preference number: 4 (lower is better)
Translates to: IHRAAGQRHRDKACPALSMTLLN*GSLECP
Trigger: AGGACATTCCAGAGATCCCCAATTTAAGAGGGTCAT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGGTATTGCTGGCCCATaGCTTCTCAAGATCACAGTC +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPGIAGP*LLKITV
Trigger: GACTGTGATCTTGAGAAGCCATGGGCCAGCAATACC...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGGATCCAGAGAGCAAGTaGAAGGTGCGGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSREDPESK*KVRRSQ
Trigger: CTGGCTTCTCCGCACCTTCCACTTGCTCTCTGGATC...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAACCACGCGGCCAGCTGTaGAACTTCCACCACGACTCC +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPEPRGQL*NFHHDS
Trigger: GGAGTCGTGGTGGAAGTTCCACAGCTGGCCGCGTGG...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGATTACTCTGCTAACTTaGGGGCCCAAGAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGITLLT*GPKSRA
Trigger: AGCCCTACTCTTGGGCCCCCAAGTTAGCAGAGTAAT...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCACATCTCAGAGAGATaGAGGCAAGCTGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLHISER*RQAGFL
Trigger: CAGGAACCCAGCTTGCCTCCATCTCTCTGAGATGTG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGCATATTCCACATGCCTaGGTGCCAGTTAAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEHIPHA*VPVKRL
Trigger: GAGCCTTTTAACTGGCACCCAGGCATGTGGAATATG...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602477.1
CDS-3UTR TCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGACAACCGGCCGCTACTaGACTCAAAGTCCAACAGAC +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRETTGRY*TQSPTD
Trigger: GTCTGTTGGACTTTGAGTTCAGTAGCGGCCGGTTGT...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAGTTGGCCACCAGGGCTaGGATCTCCCTGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSVGHQG*DLPGID
Trigger: ATCTATGCCAGGGAGATCTCAGCCCTGGTGGCCAAC...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCCTAAATCCACCGCCTTaGAGTGTAAACAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPLNPPP*SVNSPE
Trigger: CTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAG...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGTCTTGGAAATGCGTCTaGAAGCCCTTGCCATCCCGT +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRESWKCV*KPLPSR
Trigger: ACGGGATGGCAAGGGCTTTCAGACGCATTTCCAAGA...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAAGCTGCTCCGGCTGCTaGTGGGAAAAGAACAACCGG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSSCSGC*WEKNNR
Trigger: CCGGTTGTTCTTTTCCCAGCAGCAGCCGGAGCAGCT...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCGAGAGAAGGCCTGGCTaGGGCCCCGTCACCCGCCAA +
Preference number: 4 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLERRPG*GPVTRQ
Trigger: TTGGCGGGTGACGGGGCCGCAGCCAGGCCTTCTCTC...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGGGTTCTGAGCGGGGCTaGTCCCTGGGCTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILGSERG*SLGCCH
Trigger: ATGACAACAGCCCAGGGAGCAGCCCCGCTCAGAACC...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAACCGGGACTCACACTTaGTGGTCAGTGGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSTGTHT*WSVDER
Trigger: CCTCTCGTCCACTGACCAGCAAGTGTGAGTCCCGGT...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp GGAAGGGAACCCCTCGAGGGACTAGTCTGGAATAGTAGGCCAAACGGTAGGAAGCAAGGGAAGAAAAGATaGAGACTGCCTTTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GREPLEGLVWNSRPNGRKQGKKR*RLPLKH
Trigger: GTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTG...CTTCCTACCGTTTGGCCTACTATTCCAGACTAGTCCCTCGAGGGGTTCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGAAGCACGAACATTCTTaGTGCTTGGCAATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAKHEHS*CLAMGG
Trigger: GCCACCCATTGCCAAGCAGCAAGAATGTTCGTGCTT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAACTCTGCACAGATCGGTaGTGCATCCGAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPELCTDR*CIRGRA
Trigger: AGCCCTGCCTCGGATGCACCACCGATCTGTGCAGAG...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGCTGGAACTTGGGACTTaGGTTCTGAGCGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKLELGT*VLSGAA
Trigger: AGCAGCCCCGCTCAGAACCCAAGTCCCAAGTTCCAG...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGTTGAAAACCAAATTCTaGGAAATAGCCCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CADDSMSPVAPCSATSCELKTKF*EIALQV
Trigger: AACCTGCAGGGCTATTTCCCAGAATTTGGTTTTCAA...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTATGAGCAAATGCAGATaGACACTGGACTGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLMSKCR*TLDCAD
Trigger: GTCGGCACAGTCCAGTGTCCATCTGCATTTGCTCAT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
3UTR CAA 72 bp GTGGCCAGAGTAAGTGGTGTGAACAAGAGCCCCGGCTaGGGAACATGTCTCAGACTGGCATTGAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: VARVSGVNKSPG*GTCLRLALKMK
Trigger: TTTCATTTTCAATGCCAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGTTCACACCACTTACTCTGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAAGTTTATATCTGCCTaGTCCAGAGAGCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHKFISA*SREQVE
Trigger: TTCCACTTGCTCTCTGGATCAGGCAGATATAAACTT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCTAAATCCACCGCCTTaGAGTGTAAACAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLLNPPP*SVNSPE
Trigger: CTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTCAGAGGCTGCTTCTGTaGGGCTGCATATATCTTACA +
Preference number: 4 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLQRLLL*GCIYLT
Trigger: TGTAAGATATATGCAGCCTCACAGAAGCAGCCTCTG...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGCACCAGCTGGGAGGTTaGCACTGCATCACTGCTTCG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILHQLGG*HCITAS
Trigger: CGAAGCAGTGATGCAGTGTCAACCTCCCAGCTGGTG...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGAGCTGGAACAGTCCCTaGCATAAGTACTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMSWNSP*HKYFLA
Trigger: GGCTAAGAAGTACTTATGGCAGGGACTGTTCCAGCT...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAAAAGCTGTCTGGCTTCTaGAGCTCTCTGCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPEKLSGF*SSLRTC
Trigger: GCAGGTGCGCAGAGAGCTGCAGAAGCCAGACAGCTT...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCTCGGCGCAGAGCCGCTaGTGCAGGTGCACAGGCATG +
Preference number: 4 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLSAQSR*CRCTGM
Trigger: CATGCCTGTGCACCTGCAGCAGCGGCTCTGCGCCGA...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGTCCCCTGGGCGCCTCTaGACCCTTCTGTCTACCAAT +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILSPGRL*TLLSTN
Trigger: ATTGGTAGACAGAAGGGTGCAGAGGCGCCCAGGGGA...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGGCAATCACACCTTACTaGAGCCTCAGTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKAITPY*SLSLLG
Trigger: GCCCAGGAGACTGAGGCTGCAGTAAGGTGTGATTGC...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCATTATGGGCCCCTAAGTaGACACGTGGGCTTCCATGC +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSLWAPK*TRGLPC
Trigger: GCATGGAAGCCCACGTGTGCACTTAGGGGCCCATAA...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGCAGCATGAGCCCGGTTaGACCTTGCTCAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKQHEPG*TLLSNK
Trigger: CTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTG...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAAAGGACCTCCGTCAGATaGTTCTGGAGGACGTCGCGA +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPERTSVR*FWRTSR
Trigger: TCGCGACGTCCTCCAGAACCATCTGACGGAGGTCCT...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGAAGGCGGAGCCCAGGTaGTCCCTCCATTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILKAEPR*SLHFLP
Trigger: TGGAAGGAAATGGAGGGACCACCTGGGCTCCGCCTT...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGAAAAGCAGGTATTGCTaGCCCATGGCTTCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGKSRYC*PMASQD
Trigger: ATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCATTCCTGAAGAACAGATaGGAGAGTGCTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSFLKNR*ESAGAR
Trigger: CCTGGCCCCAGCACTCTCCCATCTGTTCTTCAGGAA...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGCAGAGTGGCACCAGCTaGGAGGTTGACACTGCATCA +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKQSGTS*EVDTAS
Trigger: TGATGCAGTGTCAACCTCCCAGCTGGTGCCACTCTG...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGGAGATGGAGGCAAGCTaGGTTCCTGATGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: HLREMEASWVPDDFQLIQEMEAS*VPDDFQ
Trigger: CTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTC...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGTGTAAACAAATGGACTaGTTTATGATGGAAGGCACG +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQECKQMD*FMMEGT
Trigger: CGTGCCTTCCATCATAAATCAGTCCATTTGTTTACA...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGGGCAGCTCCCATGACTaGGTTACAATGCTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILGSSHD*VTMLGA
Trigger: GGCTCCAAGCATTGTAACTCAGTCATGGGAGCTGCC...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGAAAAAGCATTTGTTCTaGATGTGCCTCATCATCCCA +
Preference number: 4 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEKKHLF*MCLIIP
Trigger: TGGGATGATGAGGCACATTCAGAACAAATGCTTTTT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAAACCAGCTGCTCCGGCTaGTGCTGGGAAAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPETSCSG*CWEKNN
Trigger: GTTGTTCTTTTCCCAGCAGCAGCCGGAGCAGCTGGT...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAGAGAGAAACCGACTTTaGCATGCTCCCTCACCCAAG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSERNRL*HAPSPK
Trigger: CTTGGGTGAGGGAGCATGGCAAAGTCGGTTTCTCTC...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGCTCTGCATGAGCAAATaGAGATGGACACTGGACTGT +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSRELCMSK*RWTLDC
Trigger: ACAGTCCAGTGTCCATCTGCATTTGCTCATGCAGAG...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGACTCCTCATAGAAGCTaGTGCGGCCTTCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKTPHRS*CGLQHP
Trigger: TGGATGCTGAAGGCCGCACCAGCTTCTATGAGGAGT...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAAACACAGGGAGGAGCCTaGAATTCCTACTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPETQGGA*NSYCTA
Trigger: GGCTGTGCAGTAGGAATTCCAGGCTCCTCCCTGTGT...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGTGTCAGAGCCCTCCTTaGGGGCTTCAGAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILCQSPP*GLQKSR
Trigger: CCTGCTTTTCTGAAGCCCCCAAGGAGGGCTCTGACA...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACCCCAGCCTTAAGTTGTaGGATACTGAACAAACAAAA +
Preference number: 4 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHPSLKL*DTEQTK
Trigger: TTTTGTTTGTTCAGTATCCCACAACTTAAGGCTGGG...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGTTTGGGAGGCTGAGGTaGGTAGACTGCCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILFGRLR*VDCLSS
Trigger: TGAGCTCAGGCAGTCTACCCACCTCAGCCTCCCAAA...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAATGCGGATGGAATCATTaGTCCCCACCAGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPECGWNH*SPPGNL
Trigger: CAGGTTCCCTGGTGGGGACCAATGATTCCATCCGCA...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAAGGGCTTCCATGCGGATaGAATCATTGGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPEGLPCG*NHWSPP
Trigger: TGGTGGGGACCAATGATTCCATCCGCATGGAAGCCC...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGAGAAGGCACAGAAGGTaGGGTTTTTGTTTTATAGGG +
Preference number: 4 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGRRHRR*GFCFIG
Trigger: CCCTATAAAACAAAAACCCCACCTTCTGTGCCTTCT...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCAGCGCCTGGAAGACCTaGAGCTTGTGCCGCAGCACA +
Preference number: 4 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLSAWKT*SLCRST
Trigger: TGTGCTGCGGCACAAGCTTCAGGTCTTCCAGGCGCT...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTGCACCAGGTCGAAGCTaGTGTTGGCCACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPAPGRS*CWPPGL
Trigger: CAGCCCTGGTGGCCAACAGCAGCTTCGACCTGGTGC...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGACAGTCCCCAACCTATaGTCACTGAGAAGATACCCG +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKTVPNL*SLRRYP
Trigger: CGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGT...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGGAGAGAAACCGACTTTaGCATGCTCCCTCACCCAAG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILERNRL*HAPSPK
Trigger: CTTGGGTGAGGGAGCATGGCAAAGTCGGTTTCTCTC...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAACTTTCTCCCTGGTGTTaGAACTGGAGAGGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPELSPWC*NWRGVG
Trigger: ACCGACTCCTCTCCAGTTGCAACACCAGGGAGAAAG...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR GCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAATTGACACTGCATCACTaGTTCGGATGCCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPELTLHH*FGCPHR
Trigger: CCTGTGAGGGCATCCGAAGCAGTGATGCAGTGTCAA...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGCTCCCAGCAGGATTATaGAGACATGTCCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILLPAGL*RHVPGA
Trigger: AGCTCCAGGGACATGTCTCCATAATCCTGCTGGGAG...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGGCTGAGAAGTGGTCATaGCCAAAGGGTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKAEKWS*PKGFSR
Trigger: CCTTGAGAAACCCTTTGGCCATGACCACTTCTCAGC...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAATGCTGGGCTGAGAAGTaGTCATGGCCAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: YECVTAGGLFLRLLSWPECWAEK*SWPKGF
Trigger: GAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCA...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGTGCACACAGCAGGCCTaGTTCTTGAACAAGATCCGA +
Preference number: 4 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKCTQQA*FLNKIR
Trigger: TCGGATCTTGTTCAAGAACCAGGCCTGCTGTGTGCA...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGAACACAAAAATTTGCTaGGCATGGTGGTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKANTKIC*AWWCNP
Trigger: GGGATTACACCACCATGCCCAGCAAATTTTTGTGTT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTAGCACTGCTCCACTCTaGCCTGCCCGGCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPSTAPL*PARLES
Trigger: TGATTCCAGCCGGGCAGGTCAGAGTGGAGCAGTGCT...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCAGGTAGGAGAATCACTTaGACCTGGGAGGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSGRRIT*TWEAKF
Trigger: AAACTTTGCCTCCCAGGTTCAAGTGATTCTCCTACC...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGAAACCGACTTTGCCATaGTCCCTCACCCAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILKPTLP*SLTQES
Trigger: GCTTTCTTGGGTGAGGGAGCATGGCAAAGTCGGTTT...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTAGACTCCCGAGTAGCTaGGACCACAGGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPRLPSS*DHRRAP
Trigger: TGGTGCCCTCCTGTGGTCCCAGCTACTCGGGAGTCT...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCACAGATCTTCACCCTCTaGAGTCTCATTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSQIFTL*SLICRV
Trigger: GACTCTGCAAATGAGACTCCAGAGGGTGAAGATCTG...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCCTGCTTGGCAATGGGTaGCTCTCATGCCCACACCTC +
Preference number: 4 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLLLGNG*LSCPHL
Trigger: GAGGTGTGGGCATGAGAGCCACCCATTGCCAAGCAG...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTGCCTCACGGGAGAGTTaGGGAGAGAGGGAATGCGTT +
Preference number: 4 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPASRES*GERECV
Trigger: AACGCATTCCCTCTCTCCGCAACTCTCCCGTGAGGC...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGAAACTACACATGTCCTaGGAATTTTGCTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ESQDSSKSTALKCKQSREKLHMS*EFCFVV
Trigger: CACCACAAAGCAAAATTCCCAGGACATGTGTAGTTT...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
3UTR CAA 72 bp GAAAATGAAAGCCAGGATTCCTCTAAATCCACCGCCTaGAAGTGTAAACAGTCCAGAGAGAAACCGACTTTG +
Preference number: 4 (lower is better)
Translates to: ENESQDSSKSTA*KCKQSREKPTL
Trigger: CAAAGTCGGTTTCTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTGCCGGCAGCTACTGTTaGTGTTGCGGGCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPAGSYC*CCGQCL
Trigger: AAGACATTGCCCGCAACATCAACAGTAGCTGCCGGC...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCCCGGAATTGGGAGCCTaGGCCCTGCATATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLPELGA*ALHILE
Trigger: TTCCAAAATATGCAGGGCTCAGGCTCCCAATTCCGG...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGAAAAACACAAAAATTTaGTGGGCATGGTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAKNTKI*WAWWCN
Trigger: ATTACACCACCATGCCCAGCAAATTTTTGTGTTTTT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGAAAAGCAGGTATTGCTaGCCCATGGCTTCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILKSRYC*PMASQD
Trigger: ATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR TCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCATGTAAACAAATGGACTaGTTTATGATGGAAGGCACG +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSCKQMD*FMMEGT
Trigger: CGTGCCTTCCATCATAAATCAGTCCATTTGTTTACA...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGAAATTCTTCCGGCCATaGAAGATATGGGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: TSPGLDFSNMICRRHLILKFFRP*KIWDKR
Trigger: CCTCTTATCCCATATCTTCCATGGCCGGAAGAATTT...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTGGATCATCTTCCCCCTaGCTTGCTGGACTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPGSSSP*LAGLLE
Trigger: TTCCAAGAGTCCAGCAAGCCAGGGGGAAGATGATCC...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR GCA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCATTTCTTCCTTGTTTCTaGATCTATCCACCAATACAC +
Preference number: 4 (lower is better)
Translates to: ICRRHLILESRPLAFRPSFLPCF*IYPPIH
Trigger: GTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAA...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CCA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCTGGAAAGTAGACCTTTaGCATTTCGACCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLWKVDL*HFDPHP
Trigger: TGGGTGAGGGTCGAAATGCCAAAGGTCTACTTTCCA...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR TCA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCCGTGTTGTGCTGGTTaGTATGAATGTGTAACTGCT +
Preference number: 4 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPPCCAG*YECVTA
Trigger: AGCAGTTACACATTCATATCAACCAGCACAACACGG...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS GCA 90 bp CCTGGGCCGCACCTCCTCTTCCGCAGGGCCCGTCACTCCGACAAGTaGGCGTGTCACGCGGCCACGCGCCGCACGACACTCCGATACCGC +
Preference number: 5 (lower is better)
Translates to: PGPHLLFRRARHSDK*ACHAATRRTTLRYR
Trigger: GCGGTATCGGAGTGTCGTGCGGCGCGTGGCCGCGTGACACGCGCACTTGTCGGAGTGACGGGCCCTGCGGAAGAGGAGGTGCGGCCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS GCA 90 bp ACGGCAGGGCTGCCCAGGTCGCCATGGCCGATGTGGAAGACGAGCTaGCGGGGCAGGCACTGGCTCTGCGCCGCGGCCCAGTGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: TAGLPRSPWPMWKTS*RGRHWLCAAAQCFS
Trigger: CGAAAAGCACTGGGCCGCGGCGCAGAGCCAGTGCCTGCCCCGGCAGCTCGTCTTCCACATCGGCCATGGCGACCTGGGCAGCCCTGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 90 bp GCTCGTGGTCAGCACGACCAGCTGCTCGCCATCCAGGCCAGTGGGTaGCTGTGGGAAGAGGGAGGCTGTGTGCCCGTCGGCACCCATGCC +
Preference number: 5 (lower is better)
Translates to: ARGQHDQLLAIQASG*LWEEGGCVPVGTHA
Trigger: GGCATGGGTGCCGACGGGCACACAGCCTCCCTCTTCCCACAGTCACCCACTGGCCTGGATGGCGAGCAGCTGGTCGTGCTGACCACGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp ATGCGGCGGTGTGGCTGGGAGGGGCTCGTGGTCAGCACGACCAGCTaGTCGCCATCCAGGCCAGTGGGTGACTGTGGGAAGAGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: MRRCGWEGLVVSTTS*SPSRPVGDCGKREA
Trigger: AGCCTCCCTCTTCCCACAGTCACCCACTGGCCTGGATGGCGAGCAGCTGGTCGTGCTGACCACGAGCCCCTCCCAGCCACACCGCCGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp AGGTCGCCATGGCCGATGTGGAAGACGAGCTGCCGGGGCAGGCACTaGCTCTGCGCCGCGGCCCAGTGCTTTTCGCTCTGCACACAGCAG +
Preference number: 5 (lower is better)
Translates to: RSPWPMWKTSCRGRH*LCAAAQCFSLCTQQ
Trigger: CTGCTGTGTGCAGAGCGAAAAGCACTGGGCCGCGGCGCAGAGCCAGTGCCTGCCCCGGCAGCTCGTCTTCCACATCGGCCATGGCGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp AACAGGTTCCTGCTGACCAGCACGGCAGGGCTGCCCAGGTCGCCATaGCCGATGTGGAAGACGAGCTGCCGGGGCAGGCACTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: NRFLLTSTAGLPRSP*PMWKTSCRGRHWLC
Trigger: GCAGAGCCAGTGCCTGCCCCGGCAGCTCGTCTTCCACATCGGCCATGGCGACCTGGGCAGCCCTGCCGTGCTGGTCAGCAGGAACCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp AGGGGCTCGTGGTCAGCACGACCAGCTGCTCGCCATCCAGGCCAGTaGGTGACTGTGGGAAGAGGGAGGCTGTGTGCCCGTCGGCACCCA +
Preference number: 5 (lower is better)
Translates to: RGSWSARPAARHPGQ*VTVGRGRLCARRHP
Trigger: TGGGTGCCGACGGGCACACAGCCTCCCTCTTCCCACAGTCACCCACTGGCCTGGATGGCGAGCAGCTGGTCGTGCTGACCACGAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp GCGCGGTTGATGAGAGGCAGGCTAAGGCTCATGCGGCGGTGTGGCTaGGAGGGGCTCGTGGTCAGCACGACCAGCTGCTCGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: ARLMRGRLRLMRRCG*EGLVVSTTSCSPSR
Trigger: CCTGGATGGCGAGCAGCTGGTCGTGCTGACCACGAGCCCCTCCCAGCCACACCGCCGCATGAGCCTTAGCCTGCCTCTCATCAACCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp TGGGTGACTGTGGGAAGAGGGAGGCTGTGTGCCCGTCGGCACCCATaGCCAGCAGCACCAGGTCGAAGCTGCTGTTGGCCACCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: WVTVGRGRLCARRHP*PAAPGRSCCWPPGL
Trigger: CAGCCCTGGTGGCCAACAGCAGCTTCGACCTGGTGCTGCTGGGCATGGGTGCCGACGGGCACACAGCCTCCCTCTTCCCACAGTCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp GCACCAGGTCGAAGCTGCTGTTGGCCACCAGGGCTGAGATCTCCCTaGCATAGATCTGGGCGCCCTGGTCCTCCTCGGCGCAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: APGRSCCWPPGLRSP*HRSGRPGPPRRRAA
Trigger: AGCGGCTCTGCGCCGAGGAGGACCAGGGCGCCCAGATCTATGCCAGGGAGATCTCAGCCCTGGTGGCCAACAGCAGCTTCGACCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp CTTGGCGCGGTTGATGAGAGGCAGGCTAAGGCTCATGCGGCGGTGTaGCTGGGAGGGGCTCGTGGTCAGCACGACCAGCTGCTCGCCATC +
Preference number: 5 (lower is better)
Translates to: LGAVDERQAKAHAAV*LGGARGQHDQLLAI
Trigger: GATGGCGAGCAGCTGGTCGTGCTGACCACGAGCCCCTCCCAGCCACACCGCCGCATGAGCCTTAGCCTGCCTCTCATCAACCGCGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 90 bp CATGCCCAGCAGCACCAGGTCGAAGCTGCTGTTGGCCACCAGGGCTaGGATCTCCCTGGCATAGATCTGGGCGCCCTGGTCCTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: HAQQHQVEAAVGHQG*DLPGIDLGALVLLG
Trigger: GCCGAGGAGGACCAGGGCGCCCAGATCTATGCCAGGGAGATCTCAGCCCTGGTGGCCAACAGCAGCTTCGACCTGGTGCTGCTGGGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 90 bp CCTGGGCTTGCAGGCAGCCCAGAAGGGCCAAGCACATCGCCACTATaGGCATATTCCACATGCCTGGGTGCTTCCTCTCGCGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: PGLAGSPEGPSTSPL*AYSTCLGASSRAAA
Trigger: CGCCGCCGCGCGAGAGGAAGCACCCAGGCATGTGGAATATGCTCATAGTGGCGATGTGCTTGGCCCTTCTGGGCTGCCTGCAAGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS TCA 90 bp GGACAACCCGCAGCCAGGCGCCCGGGCCTGGCCGGCAGCTACTGTTaGTGTTGCGGGCAATGTCTTCATAGGCGAAGGGTGGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: GQPAARRPGLAGSYC*CCGQCLHRRRVALR
Trigger: TCTCAGTGCCACCCTTCGCCTATGAAGACATTGCCCGCAACATCAACAGTAGCTGCCGGCCAGGCCCGGGCGCCTGGCTGCGGGTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp CCACCCGCTCCACATGGTGCCGGTTCCAGAGGCCGTCCAAAGCCTTaGGGTTCTGGTCTCGGAAAGGCAGGATCTGCGCCACAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PPAPHGAGSRGRPKP*GSGLGKAGSAPQPA
Trigger: AGCAGGCTGTGGCGCAGATCCTGCCTTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCCTCTGGAACCGGCACCATGTGGAGCGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp CCCGCTCCCGCACAGGGCTGTAGGCGTAGTAATCGGACAGAGGGCTaGCGAAAAGGCGGAGCCCAGGTGGTCCCTCCATTTCCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PAPAQGCRRSNRTEG*RKGGAQVVPPFPSS
Trigger: GCTGGAAGGAAATGGAGGGACCACCTGGGCTCCGCCTTTTCGGCAGCCCTCTGTCCGATTACTACGCCTACAGCCCTGTGCGGGAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp CTGTGTGCCCGTCGGCACCCATGCCCAGCAGCACCAGGTCGAAGCTaGTGTTGGCCACCAGGGCTGAGATCTCCCTGGCATAGATCTGGG +
Preference number: 5 (lower is better)
Translates to: LCARRHPCPAAPGRS*CWPPGLRSPWHRSG
Trigger: CCCAGATCTATGCCAGGGAGATCTCAGCCCTGGTGGCCAACAGCAGCTTCGACCTGGTGCTGCTGGGCATGGGTGCCGACGGGCACACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGGCATCGGGACAAGGCTaGTCCTGCCCTCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAASGQG*SCPLWG
Trigger: GCCCCAGAGAGGGCAGGACAAGCCTTGTCCCGATGC...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGCATCGGGACAAGGCTaGTCCTGCCCTCTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVASGQG*SCPLWG
Trigger: GCCCCAGAGAGGGCAGGACAAGCCTTGTCCCGATGC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp AAGGTCCCGAGTTCTGTGGCCAGCTGCTGGGCTGAGAAGTGGTCATaGCCAAAGGGTTTCTCAAGGACAACCCGCAGCCAGGCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: KVPSSVASCWAEKWS*PKGFSRTTRSQAPG
Trigger: CCCGGGCGCCTGGCTGCGGGTTGTCCTTGAGAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCGCACCAGCTGGGAGGTaGACACTGCATCACTGCTTC +
Preference number: 5 (lower is better)
Translates to: AGPRREGRHGRRKAQERSAPAGR*TLHHCF
Trigger: GAAGCAGTGATGCAGTGTCAACCTCCCAGCTGGTGC...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS GCA 90 bp AGGTCGGCGTCAGGCTGTGGAAGCTGTCTGGCTTCTGCAGCTCTCTaGGCACCTGCTCACTGTAAGACTGGTACTGGCCCACGACGGCAC +
Preference number: 5 (lower is better)
Translates to: RSASGCGSCLASAAL*APAHCKTGTGPRRH
Trigger: GTGCCGTCGTGGGCCAGTACCAGTCTTACAGTGAGCAGGTGCGCAGAGAGCTGCAGAAGCCAGACAGCTTCCACAGCCTGACGCCGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp GCCAAAGGGTTTCTCAAGGACAACCCGCAGCCAGGCGCCCGGGCCTaGCCGGCAGCTACTGTTGATGTTGCGGGCAATGTCTTCATAGGC +
Preference number: 5 (lower is better)
Translates to: AKGFLKDNPQPGARA*PAATVDVAGNVFIG
Trigger: GCCTATGAAGACATTGCCCGCAACATCAACAGTAGCTGCCGGCCAGGCCCGGGCGCCTGGCTGCGGGTTGTCCTTGAGAAACCCTTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAAGGTCGAAGCTGCTGTaGGCCACCAGGGCTGAGATC +
Preference number: 5 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVRSKLL*ATRAEI
Trigger: GATCTCAGCCCTGGTGGCCAACAGCAGCTTCGACCT...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCAACAAGAGCCCCGGCTaGGGAACATGTCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: AGPRREGRHGRRKAQERSNKSPG*GTCLRL
Trigger: CAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGTT...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCGTCTGGCCTGGGTTGTaGTTGGTGGCCAGAGTAAGT +
Preference number: 5 (lower is better)
Translates to: AGPRREGRHGRRKAQERSVWPGL*LVARVS
Trigger: ACTTACTCTGGCCACCAACAACAACCCAGGCCAGAC...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp GCGGGGCCGAGAAGGGAGGGAAGACACGGGCGAAGGAAAGCACAGGAGCGAAGCTCCAGGTTCCGGCCTTaGTTCTCACACAAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: AGPRREGRHGRRKAQERSSRFRP*FSHKRK
Trigger: CTTCCGCTTGTGTGAGAACAAAGGCCGGAACCTGGA...GCTTCGCTCCTGTGCTTTCCTTCGCCCGTGTCTTCCCTCCCTTCTCGGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602477.1
CDS CCA 90 bp TCCACATGGTGCCGGTTCCAGAGGCCGTCCAAAGCCTTGCGGTTCTaGTCTCGGAAAGGCAGGATCTGCGCCACAGCCTGCTTGCCTAAG +
Preference number: 5 (lower is better)
Translates to: STWCRFQRPSKALRF*SRKGRICATACLPK
Trigger: CTTAGGCAAGCAGGCTGTGGCGCAGATCCTGCCTTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCCTCTGGAACCGGCACCATGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACCCTCCCAGCGAAGGTaGTCAATGTGCACTAGGACG +
Preference number: 5 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVPSQRR*SMCTRT
Trigger: CGTCCTAGTGCACATTGACAACCTTCGCTGGGAGGG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 90 bp CCGCGGCCCAGTGCTTTTCGCTCTGCACACAGCAGGCCTGGTTCTTaGACAAGATCCGAGCGTAGCCCACTCTCTCGTCCAAGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: PRPSAFRSAHSRPGS*TRSERSPLSRPRLC
Trigger: GCAAAGCCTTGGACGAGAGAGTGGGCTACGCTCGGATCTTGTTCAAGAACCAGGCCTGCTGTGTGCAGAGCGAAAAGCACTGGGCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp GCATCCACGGTCTCTTTCATGATGATCTCCACCCGCTCCACATGGTaGCGGTTCCAGAGGCCGTCCAAAGCCTTGCGGTTCTGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: ASTVSFMMISTRSTW*RFQRPSKALRFWSR
Trigger: CCGAGACCAGAACCGCAAGGCTTTGGACGGCCTCTGGAACCGGCACCATGTGGAGCGGGTGGAGATCATCATGAAAGAGACCGTGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp AGAATCCAGGTTCCGGCCTTTGTTCTCACACAAGCGGAAGAGGCGTaGAGCTGTCCCCATACAGACCCGGCACAGCAGACCCAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: RIQVPAFVLTQAEEA*SCPHTDPAQQTQPV
Trigger: CACAGGCTGGGTCTGCTGTGCCGGGTCTGTATGGGGACAGCTGCACGCCTCTTCCGCTTGTGTGAGAACAAAGGCCGGAACCTGGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602477.1
CDS CCA 90 bp AAAGTCCAACAGACGGCCATTCTCAGCTCCTCCAGGGTAGAGGCGTaGGGCCTTATGGGCCAGGCTCTCCAGCAGAGGGGTCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: KVQQTAILSSSRVEA*GLMGQALQQRGPEV
Trigger: AACTTCTGGACCCCTCTGCTGGAGAGCCTGGCCCATAAGGCCCCACGCCTCTACCCTGGAGGAGCTGAGAATGGCCGTCTGTTGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGCTGGGTGCCATGTCCTaGGGGCAGGAGAGGGATTCC +
Preference number: 5 (lower is better)
Translates to: CADDSMSPVAPCSATSCELGAMS*GQERDS
Trigger: GGAATCCCTCTCCTGCCCCAAGGACATGGCACCCAG...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTGGGCTCTCTCGGTACTaGGCCCTGAGGACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: WPSVTRCSISLPANELSPGLSRY*ALRTWK
Trigger: CTTCCAGGTCCTCAGGGCCAAGTACCGAGAGAGCCC...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTTGTGAACGCCGGAGTTaGGGCGCCATCCCGTGTTGT +
Preference number: 5 (lower is better)
Translates to: KIRQACWPAPVVAATREACERRS*GAIPCC
Trigger: ACAACACGGGATGGCGCCCAAACTCCGGCGTTCACA...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 90 bp CCAGCTGCTCCGGCTGCTGCTGGGAAAAGAACAACCGGCCGCTACTaGACTCAAAGTCCAACAGACGGCCATTCTCAGCTCCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: PAAPAAAGKRTTGRY*TQSPTDGHSQLLQG
Trigger: ACCCTGGAGGAGCTGAGAATGGCCGTCTGTTGGACTTTGAGTTCAGTAGCGGCCGGTTGTTCTTTTCCCAGCAGCAGCCGGAGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp GCTCCCAGCAGGATTATGGAGACATGTCCCTGGAGCTCCTGGGCTTaGAGGCAGCCCAGAAGGGCCAAGCACATCGCCACTATGAGCATA +
Preference number: 5 (lower is better)
Translates to: APSRIMETCPWSSWA*RQPRRAKHIATMSI
Trigger: TATGCTCATAGTGGCGATGTGCTTGGCCCTTCTGGGCTGCCTGCAAGCCCAGGAGCTCCAGGGACATGTCTCCATAATCCTGCTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp CAATGTCTTCATAGGCGAAGGGTGGCACTGAGAAGTAGAAGATCCTaGCAGCCTCCCGGAGGCCTGCGTGCTGGAGCTGTGCCTCGATGT +
Preference number: 5 (lower is better)
Translates to: QCLHRRRVALRSRRS*QPPGGLRAGAVPRC
Trigger: ACATCGAGGCACAGCTCCAGCACGCAGGCCTCCGGGAGGCTGGCAGGATCTTCTACTTCTCAGTGCCACCCTTCGCCTATGAAGACATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 90 bp CACCAGCGTGGTGATCTCACGCTTCATCCTGCCCATGACCAGGACTaGCACCTTCTTGGCGCGGTTGATGAGAGGCAGGCTAAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: HQRGDLTLHPAHDQD*HLLGAVDERQAKAH
Trigger: ATGAGCCTTAGCCTGCCTCTCATCAACCGCGCCAAGAAGGTGGCAGTCCTGGTCATGGGCAGGATGAAGCGTGAGATCACCACGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp TGGAAAAAGGTCCCGAGTTCTGTGGCCAGCTGCTGGGCTGAGAAGTaGTCATGGCCAAAGGGTTTCTCAAGGACAACCCGCAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: WKKVPSSVASCWAEK*SWPKGFSRTTRSQA
Trigger: CGCCTGGCTGCGGGTTGTCCTTGAGAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCTTTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTCTCGGCCGTCTTCAGTaGGCGGTACTGGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCLGRLQ*AVLAQL
Trigger: CAGCTGAGCCAGTACCGCCAACTGAAGACGGCCGAG...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTAGGACTGCCACCTTCTaGGCGCGGTTGATGAGAGGC +
Preference number: 5 (lower is better)
Translates to: IHRAAGQRHRDKACPALSRTATF*ARLMRG
Trigger: GCCTCTCATCAACCGCGCCAAGAAGGTGGCAGTCCT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TGTGCTGATGACAGCATGAGCCCGGTTGCACCTTGCTCAGCAACAAGCTGCGAGCCCAATGCCCCTGCTTaGCACGGGGCAATGTACTCC +
Preference number: 5 (lower is better)
Translates to: CADDSMSPVAPCSATSCEPNAPA*HGAMYS
Trigger: GGAGTACATTGCCCCGTGCAAAGCAGGGGCATTGGG...CTCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTCATGCTGTCATCAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCCCAATGCCCCTGCTTaGCACGGGGCAATGTACTCC +
Preference number: 5 (lower is better)
Translates to: WPSVTRCSISLPANELSPPNAPA*HGAMYS
Trigger: GGAGTACATTGCCCCGTGCAAAGCAGGGGCATTGGG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCCTGGAAAGTAGACCTTaGGCATTTCGACCCTCACCC +
Preference number: 5 (lower is better)
Translates to: PVLSLPVRGSHRDRHIPSLESRP*AFRPSP
Trigger: GGGTGAGGGTCGAAATGCCAAAGGTCTACTTTCCAG...GCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGCCCGGTGGACAGATTTaGCAGGGAAGACTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: QCSPFPFVGHTETGTSPAPGGQI*QGRLRK
Trigger: TTTCCTCAGTCTTCCCTGCAAAATCTGTCCACCGGG...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS TCA 90 bp ACTGTTGATGTTGCGGGCAATGTCTTCATAGGCGAAGGGTGGCACTaGGAAGTAGAAGATCCTGCCAGCCTCCCGGAGGCCTGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: TVDVAGNVFIGEGWH*EVEDPASLPEACVL
Trigger: CAGCACGCAGGCCTCCGGGAGGCTGGCAGGATCTTCTACTTCTCAGTGCCACCCTTCGCCTATGAAGACATTGCCCGCAACATCAACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 90 bp CTCCTCCTGGAAAAAGGTCCCGAGTTCTGTGGCCAGCTGCTGGGCTaGGAAGTGGTCATGGCCAAAGGGTTTCTCAAGGACAACCCGCAG +
Preference number: 5 (lower is better)
Translates to: LLLEKGPEFCGQLLG*EVVMAKGFLKDNPQ
Trigger: CTGCGGGTTGTCCTTGAGAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCTTTTTCCAGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp CCACCCGGTACATCTCCTCCTCCTGGAAAAAGGTCCCGAGTTCTGTaGCCAGCTGCTGGGCTGAGAAGTGGTCATGGCCAAAGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: PPGTSPPPGKRSRVL*PAAGLRSGHGQRVS
Trigger: AGAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCTTTTTCCAGGAGGAGGAGATGTACCGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp TCAGCATCCACGGTCTCTTTCATGATGATCTCCACCCGCTCCACATaGTGCCGGTTCCAGAGGCCGTCCAAAGCCTTGCGGTTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SASTVSFMMISTRST*CRFQRPSKALRFWS
Trigger: AGACCAGAACCGCAAGGCTTTGGACGGCCTCTGGAACCGGCACCATGTGGAGCGGGTGGAGATCATCATGAAAGAGACCGTGGATGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGCTGGGTGCCATGTCCTaGGGGCAGGAGAGGGATTCC +
Preference number: 5 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQELGAMS*GQERDS
Trigger: GGAATCCCTCTCCTGCCCCAAGGACATGGCACCCAG...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTAGGCCGTCCAAAGCCTaGCGGTTCTGGTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: IHRAAGQRHRDKACPALSRPSKA*RFWSRK
Trigger: TTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCCT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGGGGCTCTCTCGGTACTaGGCCCTGAGGACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEGLSRY*ALRTWK
Trigger: CTTCCAGGTCCTCAGGGCCAAGTACCGAGAGAGCCC...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTACCTTCTTGGCGCGGTaGATGAGAGGCAGGCTAAGG +
Preference number: 5 (lower is better)
Translates to: IHRAAGQRHRDKACPALSTFLAR*MRGRLR
Trigger: CCTTAGCCTGCCTCTCATCAACCGCGCCAAGAAGGT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGAGGACTGCCACCTTCTaGGCGCGGTTGATGAGAGGC +
Preference number: 5 (lower is better)
Translates to: KQEGLLRAETPIRESPEMRTATF*ARLMRG
Trigger: GCCTCTCATCAACCGCGCCAAGAAGGTGGCAGTCCT...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCTCAGAAAAGCAGGTATaGCTGGCCCATGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLSEKQV*LAHGFS
Trigger: TGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGA...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TGTCGTGAGTTCCACCTGGGCCCTCCGGGAGAACAGGGACAGGAGAAACACAAGAACAAGAGCCCCGGCTaGGGAACATGTCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: CREFHLGPPGEQGQEKHKNKSPG*GTCLRL
Trigger: CAGTCTGAGACATGTTCCCAAGCCGGGGCTCTTGTT...CTTGTGTTTCTCCTGTCCCTGTTCTCCCGGAGGGCCCAGGTGGAACTCACGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGATCCTGCAGGGGTACTaGGGCATGTGGAGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: KQEGLLRAETPIRESPEMILQGY*GMWRPL
Trigger: AAGGGGCCTCCACATGCCCAAGTACCCCTGCAGGAT...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 90 bp GAGGCCAGCAAGTTCTCTGTGGTGATGAAGAAATTCTTCCGGCCATaGAAGATATGGGATAAGAGGACGGAGTGGGCGTCCCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: EASKFSVVMKKFFRP*KIWDKRTEWASRSR
Trigger: GCGGGAGCGGGACGCCCACTCCGTCCTCTTATCCCATATCTTCCATGGCCGGAAGAATTTCTTCATCACCACAGAGAACTTGCTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACCTTGGCCATGAGCTCTaGACCCTGCTTGGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHLGHEL*TLLGGC
Trigger: ACAGCCCCCAAGCAGGGTCAAGAGCTCATGGCCAAG...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGTGTGAACGCCGGAGTTaGGGCGCCATCCCGTGTTGT +
Preference number: 5 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQECERRS*GAIPCC
Trigger: ACAACACGGGATGGCGCCCAAACTCCGGCGTTCACA...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACCTCTGGAGTCTCATTaGCAGAGTCTCATTTGTCGT +
Preference number: 5 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVPLESH*QSLICR
Trigger: ACGACAAATGAGACTCTGCAAATGAGACTCCAGAGG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGCACCGGGACTCACACTaGCTGGTCAGTGGACGAGAG +
Preference number: 5 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQEHRDSH*LVSGRE
Trigger: CTCTCGTCCACTGACCAGCAAGTGTGAGTCCCGGTG...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTGGGGGCCAGGGGGTTaGGATCAGAATCCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHWGPGG*DQNPGS
Trigger: GGAACCTGGATTCTGATCCAAACCCCCTGGCCCCCA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000602477.1
CDS CCA 90 bp AAGTTCTCTGTGGTGATGAAGAAATTCTTCCGGCCATGGAAGATATaGGATAAGAGGACGGAGTGGGCGTCCCGCTCCCGCACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KFSVVMKKFFRPWKI*DKRTEWASRSRTGL
Trigger: CAGCCCTGTGCGGGAGCGGGACGCCCACTCCGTCCTCTTATCCCATATCTTCCATGGCCGGAAGAATTTCTTCATCACCACAGAGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCAGGTCGAAGCTGCTGTaGGCCACCAGGGCTGAGATC +
Preference number: 5 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPRSKLL*ATRAEI
Trigger: GATCTCAGCCCTGGTGGCCAACAGCAGCTTCGACCT...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CTCTGTCTGGCCTGGGTTGTTGTTGGTGGCCAGAGTAAGTGGTGTGAACAAGAGACCTTCTTGGCGCGGTaGATGAGAGGCAGGCTAAGG +
Preference number: 5 (lower is better)
Translates to: LCLAWVVVGGQSKWCEQETFLAR*MRGRLR
Trigger: CCTTAGCCTGCCTCTCATCAACCGCGCCAAGAAGGT...CTCTTGTTCACACCACTTACTCTGGCCACCAACAACAACCCAGGCCAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CAGTGCTCTCCCTTCCCGTTCGTGGGTCACACAGAGACAGGCACATCCCCAGCGAATGACCCTCTTAAATaGGGGATCTCTGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: QCSPFPFVGHTETGTSPANDPLK*GISGMS
Trigger: GGACATTCCAGAGATCCCCAATTTAAGAGGGTCATT...CGCTGGGGATGTGCCTGTCTCTGTGTGACCCACGAACGGGAAGGGAGAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTAAACAAGAGGGGCTATaGAGAGCGGAAACACCCATC +
Preference number: 5 (lower is better)
Translates to: KIRQACWPAPVVAATREAKQEGL*RAETPI
Trigger: GATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGGTCTGGCCTGGGTTGTaGTTGGTGGCCAGAGTAAGT +
Preference number: 5 (lower is better)
Translates to: KQEGLLRAETPIRESPEMVWPGL*LVARVS
Trigger: ACTTACTCTGGCCACCAACAACAACCCAGGCCAGAC...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGTCTGTCTGGCCTGGGTaGTTGTTGGTGGCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: KQEGLLRAETPIRESPEMSVWPG*LLVARV
Trigger: TACTCTGGCCACCAACAACAACCCAGGCCAGACAGA...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTAGGGACATCTCCAGGTTaGGACTTTTCCAACATGATT +
Preference number: 5 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVGTSPG*DFSNMI
Trigger: AATCATGTTGGAAAAGTCCAAACCTGGAGATGTCCC...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCCAGGAAACCTTCCCTGATTAACCTCAGCCCACCACGTCACGTCTCCTCTTGTATGCGGATGGAATCATaGGTCCCCACCAGGGAACCT +
Preference number: 5 (lower is better)
Translates to: PRKPSLINLSPPRHVSSCMRMES*VPTREP
Trigger: AGGTTCCCTGGTGGGGACCAATGATTCCATCCGCAT...ACAAGAGGAGACGTGACGTGGTGGGCTGAGGTTAATCAGGGAAGGTTTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACACTGAGTTACAATGCTaGGAGCCCCCGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHTELQC*EPPRAE
Trigger: CTCTGCCCTCGGGGGCTCCAAGCATTGTAACTCAGT...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS GCA 90 bp TACATCTCCTCCTCCTGGAAAAAGGTCCCGAGTTCTGTGGCCAGCTaGTGGGCTGAGAAGTGGTCATGGCCAAAGGGTTTCTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: YISSSWKKVPSSVAS*WAEKWSWPKGFSRT
Trigger: TGTCCTTGAGAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCTTTTTCCAGGAGGAGGAGATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp GAAAGCCAGGATTCCTCTAAATCCACCGCCTTGAAGTGTAAACAGTCCAGAGAGTCCGCACTGCTGACATaGTGGGGCAGCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: ESQDSSKSTALKCKQSRESALLT*WGSSMA
Trigger: GGCCATGGAGCTGCCCCACAATGTCAGCAGTGCGGA...CTCTCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGAGGAATCCTGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGCCCTCCCAGCGAAGGTaGTCAATGTGCACTAGGACG +
Preference number: 5 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGPSQRR*SMCTRT
Trigger: CGTCCTAGTGCACATTGACAACCTTCGCTGGGAGGG...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTCTCTCGTCCAAGGCTTaGCCAGACATCAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: IHRAAGQRHRDKACPALSLSSKA*PDIRMK
Trigger: TTTCATCCTGATGTCTGGCAAAGCCTTGGACGAGAG...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGTGCAGGCCCTGGAAGTaGGACTCCGGGTCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMCRPWK*DSGSES
Trigger: ACTCTCAGACCCGGAGTCCAACTTCCAGGGCCTGCA...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTGGCCTGGGTTGTTGTaGGTGGCCAGAGTAAGTGGT +
Preference number: 5 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHWPGLL*VARVSG
Trigger: ACCACTTACTCTGGCCACCAACAACAACCCAGGCCA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGAGCCTCACGGGAGAGTaGCGGAGAGAGGGAATGCGT +
Preference number: 5 (lower is better)
Translates to: TPREEKMQTAFKAPVSKASLTGE*RREGMR
Trigger: ACGCATTCCCTCTCTCCGCAACTCTCCCGTGAGGCT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACCATCTTCCCCCTGGCTaGCTGGACTCTTGGAAATGC +
Preference number: 5 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHHLPPG*LDSWKC
Trigger: GCATTTCCAAGAGTCCAGCAAGCCAGGGGGAAGATG...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp ATACACAGAGCTGCCGGTCAAAGGCATCGGGACAAGGCTTGTCCTGCCCTCTCTAAAGCACGAACATTCTaGCTGCTTGGCAATGGGTGG +
Preference number: 5 (lower is better)
Translates to: IHRAAGQRHRDKACPALSKARTF*LLGNGW
Trigger: CCACCCATTGCCAAGCAGCAAGAATGTTCGTGCTTT...AGAGAGGGCAGGACAAGCCTTGTCCCGATGCCTTTGACCGGCAGCTCTGTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTGGCCGGCAGCTACTGTaGATGTTGCGGGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLGRQLL*MLRAMS
Trigger: AGACATTGCCCGCAACATCAACAGTAGCTGCCGGCC...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTAGGCCGTCCAAAGCCTaGCGGTTCTGGTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLRPSKA*RFWSRK
Trigger: TTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCCT...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTAATGACCCTCTTAAATaGGGGATCTCTGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: KIRQACWPAPVVAATREANDPLK*GISGMS
Trigger: GGACATTCCAGAGATCCCCAATTTAAGAGGGTCATT...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGTCAGAAAAGCAGGTATaGCTGGCCCATGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KQEGLLRAETPIRESPEMSEKQV*LAHGFS
Trigger: TGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGA...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCATGTCAGAGCCCTCCTaGGGGGCTTCAGAAAAGCAG +
Preference number: 5 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPMSEPS*GASEKQ
Trigger: CTGCTTTTCTGAAGCCCCCAAGGAGGGCTCTGACAT...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAAATTAGACAGGCATGCTGGCCGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTTCTAAATCCACCGCCTaGAAGTGTAAACAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: KIRQACWPAPVVAATREASKSTA*KCKQSR
Trigger: TCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGA...AGCCTCCCGAGTAGCTGCGACTACAGGCGCCGGCCAGCATGCCTGTCTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TGGTGGGAGCAGAGCCGCCTGGATGGCCCAGTGTCACTCGATGCTCCATCTCTCCTTTTCCAACATGATTaGCAGAAGGCACTTGATTCT +
Preference number: 5 (lower is better)
Translates to: WWEQSRLDGPVSLDAPSLLFQHD*QKALDS
Trigger: AGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAG...GAGAGATGGAGCATCGAGTGACACTGGGCCATCCAGGCGGCTCTGCTCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGGAGCCCGGTTGCACCTaGCTCAGCAACAAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: HLREMEASWVPDDFQLIQEPGCT*LSNKLR
Trigger: TCGCAGCTTGTTGCTGAGCAAGGTGCAACCGGGCTC...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTGGCTTGCTGGACTCTaGGAAATGCGTCTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHWLAGL*EMRLKA
Trigger: GGCTTTCAGACGCATTTCCAAGAGTCCAGCAAGCCA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAAGAGATGGGCCACTTCTaGGGCTCATGGCCCACCCGG +
Preference number: 5 (lower is better)
Translates to: YECVTAGGLFLRLLSWPEEMGHF*GSWPTR
Trigger: CCGGGTGGGCCATGAGCCCAAGAAGTGGCCCATCTC...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGATGTCAGAGCCCTCCTaGGGGGCTTCAGAAAAGCAG +
Preference number: 5 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAMSEPS*GASEKQ
Trigger: CTGCTTTTCTGAAGCCCCCAAGGAGGGCTCTGACAT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp TGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCGCTTTGGCCTGGGTTGTTGTaGGTGGCCAGAGTAAGTGGT +
Preference number: 5 (lower is better)
Translates to: WLLKITVPNLCSLRRYPLWPGLL*VARVSG
Trigger: ACCACTTACTCTGGCCACCAACAACAACCCAGGCCA...AAGCGGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CATCTCAGAGAGATGGAGGCAAGCTGGGTTCCTGATGATTTCCAGCTAATACAGCCTTTCTCCCTGGTGTaGCAACTGGAGAGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: HLREMEASWVPDDFQLIQPFSLV*QLERSR
Trigger: CCGACTCCTCTCCAGTTGCAACACCAGGGAGAAAGG...CTGTATTAGCTGGAAATCATCAGGAACCCAGCTTGCCTCCATCTCTCTGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp GACAGAACTAGGAGGGGCAGGCTGTACCCAGCACATCTCAGAGAGATGGAGGCAGGGACATCTCCAGGTTaGGACTTTTCCAACATGATT +
Preference number: 5 (lower is better)
Translates to: DRTRRGRLYPAHLREMEAGTSPG*DFSNMI
Trigger: AATCATGTTGGAAAAGTCCAAACCTGGAGATGTCCC...TGCCTCCATCTCTCTGAGATGTGCTGGGTACAGCCTGCCCCTCCTAGTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp TCCTGGCTCTGGGCACCGTGGTTCTGTCCTAACGAGGGGCGCTCTCTGGGTGTACTTTATGAAACCTGCTaGGAACACAGTTGTAAACAA +
Preference number: 5 (lower is better)
Translates to: SWLWAPWFCPNEGRSLGVLYETC*EHSCKQ
Trigger: TTGTTTACAACTGTGTTCCAAGCAGGTTTCATAAAG...TACACCCAGAGAGCGCCCCTCGTTAGGACAGAACCACGGTGCCCAGAGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCTTTGCAGAGTCTCATTaGTCGTCCGGTCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPFAESH*SSGHCG
Trigger: GCCACAGTGACCGGACGACAAATGAGACTCTGCAAA...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCAAGCGCTCCCAAAAGTaGGCTAGAGGGTACACTTCG +
Preference number: 5 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPKRSQK*ARGYTS
Trigger: CGAAGTGTACCCTCTAGCCAACTTTTGGGAGCGCTT...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp ACATCTCCAGGTTTGGACTTTTCCAACATGATTTGCAGAAGGCACTTGATTCTGTCCGCACTGCTGACATaGTGGGGCAGCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: TSPGLDFSNMICRRHLILSALLT*WGSSMA
Trigger: GGCCATGGAGCTGCCCCACAATGTCAGCAGTGCGGA...CAGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAGTCCAAACCTGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAATGCAGGCCCTGGAAGTaGGACTCCGGGTCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: YECVTAGGLFLRLLSWPECRPWK*DSGSES
Trigger: ACTCTCAGACCCGGAGTCCAACTTCCAGGGCCTGCA...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ACACCAAGGGAAGAAAAGATGCAGACTGCCTTTAAAGCACCTGTCAGCAAGGCGAAACAAGAGGGGCTATaGAGAGCGGAAACACCCATC +
Preference number: 5 (lower is better)
Translates to: TPREEKMQTAFKAPVSKAKQEGL*RAETPI
Trigger: GATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT...CGCCTTGCTGACAGGTGCTTTAAAGGCAGTCTGCATCTTTTCTTCCCTTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCACCTTTCTCCCTGGTGTaGCAACTGGAGAGGAGTCGG +
Preference number: 5 (lower is better)
Translates to: ICRRHLILESRPLAFRPSPFSLV*QLERSR
Trigger: CCGACTCCTCTCCAGTTGCAACACCAGGGAGAAAGG...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp TGGCCCAGTGTCACTCGATGCTCCATCTCTCTCCCCGCTAATGAGCTGTCACCTCTTTTCCAACATGATTaGCAGAAGGCACTTGATTCT +
Preference number: 5 (lower is better)
Translates to: WPSVTRCSISLPANELSPLFQHD*QKALDS
Trigger: AGAATCAAGTGCCTTCTGCAAATCATGTTGGAAAAG...AGGTGACAGCTCATTAGCGGGGAGAGAGATGGAGCATCGAGTGACACTGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGGAACATTCTTGCTGCTaGGCAATGGGTGGCTCTCAT +
Preference number: 5 (lower is better)
Translates to: KSRYCWPMASQDHSPQPMEHSCC*AMGGSH
Trigger: ATGAGAGCCACCCATTGCCAAGCAGCAAGAATGTTC...CATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp TATGAATGTGTAACTGCTGGAGGTCTTTTCTTAAGACTTCTCTCCTGGCCTGAAGGCCGGCAGCTACTGTaGATGTTGCGGGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: YECVTAGGLFLRLLSWPEGRQLL*MLRAMS
Trigger: AGACATTGCCCGCAACATCAACAGTAGCTGCCGGCC...TTCAGGCCAGGAGAGAAGTCTTAAGAAAAGACCTCCAGCAGTTACACATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCGAGATGGGCCACTTCTaGGGCTCATGGCCCACCCGG +
Preference number: 5 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLEMGHF*GSWPTR
Trigger: CCGGGTGGGCCATGAGCCCAAGAAGTGGCCCATCTC...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp CCCATGGCTTCTCAAGATCACAGTCCCCAACCTATGCTCACTGAGAAGATACCCTCTAAATCCACCGCCTaGAAGTGTAAACAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PMASQDHSPQPMLTEKIPSKSTA*KCKQSR
Trigger: TCTGGACTGTTTACACTTCAAGGCGGTGGATTTAGA...GGGTATCTTCTCAGTGAGCATAGGTTGGGGACTGTGATCTTGAGAAGCCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp CCTTGGGGGCTTCAGAAAAGCAGGTATTGCTGGCCCATGGCTTCTCAAGATCACTGTCTCAGACTGGCATaGAAAATGAAAGCCAGGATT +
Preference number: 5 (lower is better)
Translates to: PWGLQKSRYCWPMASQDHCLRLA*KMKARI
Trigger: AATCCTGGCTTTCATTTTCAATGCCAGTCTGAGACA...GTGATCTTGAGAAGCCATGGGCCAGCAATACCTGCTTTTCTGAAGCCCCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGTCTGTCTGGCCTGGGTaGTTGTTGGTGGCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKSVWPG*LLVARV
Trigger: TACTCTGGCCACCAACAACAACCCAGGCCAGACAGA...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp AAACAAGAGGGGCTATTGAGAGCGGAAACACCCATCCGGGAGTCCCCTGAGATGAGGGCCTATTTTAACTaGCAGTTAGCAGGAGAATTT +
Preference number: 5 (lower is better)
Translates to: KQEGLLRAETPIRESPEMRAYFN*QLAGEF
Trigger: AAATTCTCCTGCTAACTGCAAGTTAAAATAGGCCCT...CATCTCAGGGGACTCCCGGATGGGTGTTTCCGCTCTCAATAGCCCCTCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCCTCGGCCGTCTTCAGTaGGCGGTACTGGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLLGRLQ*AVLAQL
Trigger: CAGCTGAGCCAGTACCGCCAACTGAAGACGGCCGAG...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp ACTTGGGGGCCCAAGAGTAGGGCTAAAGCATTGTCTGCAGAGAAACAAACAGGGTGTCTCAGACTGGCATaGAAAATGAAAGCCAGGATT +
Preference number: 5 (lower is better)
Translates to: TWGPKSRAKALSAEKQTGCLRLA*KMKARI
Trigger: AATCCTGGCTTTCATTTTCAATGCCAGTCTGAGACA...CCCTGTTTGTTTCTCTGCAGACAATGCTTTAGCCCTACTCTTGGGCCCCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp ATTTGCAGAAGGCACTTGATTCTGGAAAGTAGACCTTTGGCATTTCGACCCTCACTGGAAAGTAGACCTTaGGCATTTCGACCCTCACCC +
Preference number: 5 (lower is better)
Translates to: ICRRHLILESRPLAFRPSLESRP*AFRPSP
Trigger: GGGTGAGGGTCGAAATGCCAAAGGTCTACTTTCCAG...TGAGGGTCGAAATGCCAAAGGTCTACTTTCCAGAATCAAGTGCCTTCTGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ATTTCTTCCTTGTTTCTGCATCTATCCACCAATACACAGAGCTGCCGGTCAAAGCTCTCGTCCAAGGCTTaGCCAGACATCAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: ISSLFLHLSTNTQSCRSKLSSKA*PDIRMK
Trigger: TTTCATCCTGATGTCTGGCAAAGCCTTGGACGAGAG...CTTTGACCGGCAGCTCTGTGTATTGGTGGATAGATGCAGAAACAAGGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS-3UTR CAA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTGCTGGAACTTGGGACTaGGGTTCTGAGCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPAGTWD*GSERGC
Trigger: GCAGCCCCGCTCAGAACCCAAGTCCCAAGTTCCAGC...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp ACTAGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTGCTCCCTGGGCTGTaGTCATCACTCTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: TSCSNILHTAFSKSKCLPLLPGL*SSLFPF
Trigger: AAAAGGAAAGAGTGATGACAACAGCCCAGGGAGCAG...AGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS-3UTR CAA 90 bp AGCTGTTCAAATATACTCCATACAGCTTTCAGCAAATCAAAGTGTTTACCTCTCCTTTATGAAACCTGCTaGGAACACAGTTGTAAACAA +
Preference number: 5 (lower is better)
Translates to: SCSNILHTAFSKSKCLPLLYETC*EHSCKQ
Trigger: TTGTTTACAACTGTGTTCCAAGCAGGTTTCATAAAG...GAGAGGTAAACACTTTGATTTGCTGAAAGCTGTATGGAGTATATTTGAACAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS GCA 72 bp CTGCCCAGGTCGCCATGGCCGATGTGGAAGACGAGCTaGCGGGGCAGGCACTGGCTCTGCGCCGCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: LPRSPWPMWKTS*RGRHWLCAAAQ
Trigger: CTGGGCCGCGGCGCAGAGCCAGTGCCTGCCCCGGCAGCTCGTCTTCCACATCGGCCATGGCGACCTGGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp CACCTCCTCTTCCGCAGGGCCCGTCACTCCGACAAGTaGGCGTGTCACGCGGCCACGCGCCGCACGACACTC +
Preference number: 6 (lower is better)
Translates to: HLLFRRARHSDK*ACHAATRRTTL
Trigger: GAGTGTCGTGCGGCGCGTGGCCGCGTGACACGCGCACTTGTCGGAGTGACGGGCCCTGCGGAAGAGGAGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS CCA 72 bp AGCACGGCAGGGCTGCCCAGGTCGCCATGGCCGATGTaGAAGACGAGCTGCCGGGGCAGGCACTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: STAGLPRSPWPM*KTSCRGRHWLC
Trigger: GCAGAGCCAGTGCCTGCCCCGGCAGCTCGTCTTCCACATCGGCCATGGCGACCTGGGCAGCCCTGCCGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp TGGCCGATGTGGAAGACGAGCTGCCGGGGCAGGCACTaGCTCTGCGCCGCGGCCCAGTGCTTTTCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: WPMWKTSCRGRH*LCAAAQCFSLC
Trigger: GCAGAGCGAAAAGCACTGGGCCGCGGCGCAGAGCCAGTGCCTGCCCCGGCAGCTCGTCTTCCACATCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 72 bp CAGCACGACCAGCTGCTCGCCATCCAGGCCAGTGGGTaGCTGTGGGAAGAGGGAGGCTGTGTGCCCGTCGGC +
Preference number: 6 (lower is better)
Translates to: QHDQLLAIQASG*LWEEGGCVPVG
Trigger: GCCGACGGGCACACAGCCTCCCTCTTCCCACAGTCACCCACTGGCCTGGATGGCGAGCAGCTGGTCGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp GTGGGAAGAGGGAGGCTGTGTGCCCGTCGGCACCCATaGCCAGCAGCACCAGGTCGAAGCTGCTGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: VGRGRLCARRHP*PAAPGRSCCWP
Trigger: TGGCCAACAGCAGCTTCGACCTGGTGCTGCTGGGCATGGGTGCCGACGGGCACACAGCCTCCCTCTTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp TGTGGCTGGGAGGGGCTCGTGGTCAGCACGACCAGCTaGTCGCCATCCAGGCCAGTGGGTGACTGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: CGWEGLVVSTTS*SPSRPVGDCGK
Trigger: CTTCCCACAGTCACCCACTGGCCTGGATGGCGAGCAGCTGGTCGTGCTGACCACGAGCCCCTCCCAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp CGAAGCTGCTGTTGGCCACCAGGGCTGAGATCTCCCTaGCATAGATCTGGGCGCCCTGGTCCTCCTCGGCGC +
Preference number: 6 (lower is better)
Translates to: RSCCWPPGLRSP*HRSGRPGPPRR
Trigger: GCGCCGAGGAGGACCAGGGCGCCCAGATCTATGCCAGGGAGATCTCAGCCCTGGTGGCCAACAGCAGCTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp ATGAGAGGCAGGCTAAGGCTCATGCGGCGGTGTGGCTaGGAGGGGCTCGTGGTCAGCACGACCAGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: MRGRLRLMRRCG*EGLVVSTTSCS
Trigger: CGAGCAGCTGGTCGTGCTGACCACGAGCCCCTCCCAGCCACACCGCCGCATGAGCCTTAGCCTGCCTCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 72 bp GCAGCCAGGCGCCCGGGCCTGGCCGGCAGCTACTGTTaGTGTTGCGGGCAATGTCTTCATAGGCGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: AARRPGLAGSYC*CCGQCLHRRRV
Trigger: CACCCTTCGCCTATGAAGACATTGCCCGCAACATCAACAGTAGCTGCCGGCCAGGCCCGGGCGCCTGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp CAGACGGCCATTCTCAGCTCCTCCAGGGTAGAGGCGTaGGGCCTTATGGGCCAGGCTCTCCAGCAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: QTAILSSSRVEA*GLMGQALQQRG
Trigger: ACCCCTCTGCTGGAGAGCCTGGCCCATAAGGCCCCACGCCTCTACCCTGGAGGAGCTGAGAATGGCCGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp TGGTCAGCACGACCAGCTGCTCGCCATCCAGGCCAGTaGGTGACTGTGGGAAGAGGGAGGCTGTGTGCCCGT +
Preference number: 6 (lower is better)
Translates to: WSARPAARHPGQ*VTVGRGRLCAR
Trigger: ACGGGCACACAGCCTCCCTCTTCCCACAGTCACCCACTGGCCTGGATGGCGAGCAGCTGGTCGTGCTGACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp GTTGATGAGAGGCAGGCTAAGGCTCATGCGGCGGTGTaGCTGGGAGGGGCTCGTGGTCAGCACGACCAGCTG +
Preference number: 6 (lower is better)
Translates to: VDERQAKAHAAV*LGGARGQHDQL
Trigger: CAGCTGGTCGTGCTGACCACGAGCCCCTCCCAGCCACACCGCCGCATGAGCCTTAGCCTGCCTCTCATCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 90 bp TCCACCCGCTCCACATGGTGCCGGTTCCAGAGGCCGTCCAAAGCCTaGCGGTTCTGGTCTCGGAAAGGCAGGATCTGCGCCACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: STRSTWCRFQRPSKA*RFWSRKGRICATAC
Trigger: GCAGGCTGTGGCGCAGATCCTGCCTTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCCTCTGGAACCGGCACCATGTGGAGCGGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp TTTCTCAAGGACAACCCGCAGCCAGGCGCCCGGGCCTaGCCGGCAGCTACTGTTGATGTTGCGGGCAATGTC +
Preference number: 6 (lower is better)
Translates to: FLKDNPQPGARA*PAATVDVAGNV
Trigger: GACATTGCCCGCAACATCAACAGTAGCTGCCGGCCAGGCCCGGGCGCCTGGCTGCGGGTTGTCCTTGAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 90 bp CGCTTCATCCTGCCCATGACCAGGACTGCCACCTTCTTGGCGCGGTaGATGAGAGGCAGGCTAAGGCTCATGCGGCGGTGTGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: RFILPMTRTATFLAR*MRGRLRLMRRCGWE
Trigger: CTCCCAGCCACACCGCCGCATGAGCCTTAGCCTGCCTCTCATCAACCGCGCCAAGAAGGTGGCAGTCCTGGTCATGGGCAGGATGAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 72 bp CAGGAGAGGGATTCCAGGGCCTTGGCCATGAGCTCTTaGCCCTGCTTGGGGGCTGTCAGAGCAGCTCCATGG +
Preference number: 6 (lower is better)
Translates to: QERDSRALAMSS*PCLGAVRAAPW
Trigger: CCATGGAGCTGCTCTGACAGCCCCCAAGCAGGGTCAAGAGCTCATGGCCAAGGCCCTGGAATCCCTCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp CCACATGGTGCCGGTTCCAGAGGCCGTCCAAAGCCTTaGGGTTCTGGTCTCGGAAAGGCAGGATCTGCGCCA +
Preference number: 6 (lower is better)
Translates to: PHGAGSRGRPKP*GSGLGKAGSAP
Trigger: TGGCGCAGATCCTGCCTTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCCTCTGGAACCGGCACCATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp CCAGTTGCTCCCAGCAGGATTATGGAGACATGTCCCTaGAGCTCCTGGGCTTGCAGGCAGCCCAGAAGGGCC +
Preference number: 6 (lower is better)
Translates to: PVAPSRIMETCP*SSWACRQPRRA
Trigger: GGCCCTTCTGGGCTGCCTGCAAGCCCAGGAGCTCCAGGGACATGTCTCCATAATCCTGCTGGGAGCAACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 72 bp TCCACATGGTGCCGGTTCCAGAGGCCGTCCAAAGCCTaGCGGTTCTGGTCTCGGAAAGGCAGGATCTGCGCC +
Preference number: 6 (lower is better)
Translates to: STWCRFQRPSKA*RFWSRKGRICA
Trigger: GGCGCAGATCCTGCCTTTCCGAGACCAGAACCGCAAGGCTTTGGACGGCCTCTGGAACCGGCACCATGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 72 bp CTGCCCATGACCAGGACTGCCACCTTCTTGGCGCGGTaGATGAGAGGCAGGCTAAGGCTCATGCGGCGGTGT +
Preference number: 6 (lower is better)
Translates to: LPMTRTATFLAR*MRGRLRLMRRC
Trigger: ACACCGCCGCATGAGCCTTAGCCTGCCTCTCATCAACCGCGCCAAGAAGGTGGCAGTCCTGGTCATGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp ATGAAAGGCACGCCCTCCCAGCGAAGGTTGTCAATGTaGACTAGGACGGCTGCGAAGGTCGGCGTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: MKGTPSQRRLSM*TRTAAKVGVRL
Trigger: CAGCCTGACGCCGACCTTCGCAGCCGTCCTAGTGCACATTGACAACCTTCGCTGGGAGGGCGTGCCTTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp CACTGGCTCTGCGCCGCGGCCCAGTGCTTTTCGCTCTaGACACAGCAGGCCTGGTTCTTGAACAAGATCCGA +
Preference number: 6 (lower is better)
Translates to: HWLCAAAQCFSL*TQQAWFLNKIR
Trigger: TCGGATCTTGTTCAAGAACCAGGCCTGCTGTGTGCAGAGCGAAAAGCACTGGGCCGCGGCGCAGAGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp GCACAGGGCTGTAGGCGTAGTAATCGGACAGAGGGCTaGCGAAAAGGCGGAGCCCAGGTGGTCCCTCCATTT +
Preference number: 6 (lower is better)
Translates to: AQGCRRSNRTEG*RKGGAQVVPPF
Trigger: AAATGGAGGGACCACCTGGGCTCCGCCTTTTCGGCAGCCCTCTGTCCGATTACTACGCCTACAGCCCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp GTTCCGGCCTTTGTTCTCACACAAGCGGAAGAGGCGTaGAGCTGTCCCCATACAGACCCGGCACAGCAGACC +
Preference number: 6 (lower is better)
Translates to: VPAFVLTQAEEA*SCPHTDPAQQT
Trigger: GGTCTGCTGTGCCGGGTCTGTATGGGGACAGCTGCACGCCTCTTCCGCTTGTGTGAGAACAAAGGCCGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602477.1
CDS CCA 72 bp AGCTCCATGGCCACGAGGGTGAGGACCTCCGTCAGATaGTTCTGGAGGACGTCGCGAATGACACCGTACTCC +
Preference number: 6 (lower is better)
Translates to: SSMATRVRTSVR*FWRTSRMTPYS
Trigger: GGAGTACGGTGTCATTCGCGACGTCCTCCAGAACCATCTGACGGAGGTCCTCACCCTCGTGGCCATGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 72 bp CAGGATTATGGAGACATGTCCCTGGAGCTCCTGGGCTaGCAGGCAGCCCAGAAGGGCCAAGCACATCGCCAC +
Preference number: 6 (lower is better)
Translates to: QDYGDMSLELLG*QAAQKGQAHRH
Trigger: GTGGCGATGTGCTTGGCCCTTCTGGGCTGCCTGCAAGCCCAGGAGCTCCAGGGACATGTCTCCATAATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 90 bp GCTTTGCCAGACATCAGGATGAAAGGCACGCCCTCCCAGCGAAGGTaGTCAATGTGCACTAGGACGGCTGCGAAGGTCGGCGTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ALPDIRMKGTPSQRR*SMCTRTAAKVGVRL
Trigger: CAGCCTGACGCCGACCTTCGCAGCCGTCCTAGTGCACATTGACAACCTTCGCTGGGAGGGCGTGCCTTTCATCCTGATGTCTGGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 90 bp GTGATCTCACGCTTCATCCTGCCCATGACCAGGACTGCCACCTTCTaGGCGCGGTTGATGAGAGGCAGGCTAAGGCTCATGCGGCGGTGT +
Preference number: 6 (lower is better)
Translates to: VISRFILPMTRTATF*ARLMRGRLRLMRRC
Trigger: ACACCGCCGCATGAGCCTTAGCCTGCCTCTCATCAACCGCGCCAAGAAGGTGGCAGTCCTGGTCATGGGCAGGATGAAGCGTGAGATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 72 bp GCAGGCAGCCCAGAAGGGCCAAGCACATCGCCACTATaGGCATATTCCACATGCCTGGGTGCTTCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: AGSPEGPSTSPL*AYSTCLGASSR
Trigger: GCGAGAGGAAGCACCCAGGCATGTGGAATATGCTCATAGTGGCGATGTGCTTGGCCCTTCTGGGCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377403.7
CDS GCA 72 bp AGGATTATGGAGACATGTCCCTGGAGCTCCTGGGCTTaGAGGCAGCCCAGAAGGGCCAAGCACATCGCCACT +
Preference number: 6 (lower is better)
Translates to: RIMETCPWSSWA*RQPRRAKHIAT
Trigger: AGTGGCGATGTGCTTGGCCCTTCTGGGCTGCCTGCAAGCCCAGGAGCTCCAGGGACATGTCTCCATAATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp GGTGATCTCACGCTTCATCCTGCCCATGACCAGGACTaGCACCTTCTTGGCGCGGTTGATGAGAGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: GDLTLHPAHDQD*HLLGAVDERQA
Trigger: AGCCTGCCTCTCATCAACCGCGCCAAGAAGGTGGCAGTCCTGGTCATGGGCAGGATGAAGCGTGAGATCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp ACGGTCTCTTTCATGATGATCTCCACCCGCTCCACATaGTGCCGGTTCCAGAGGCCGTCCAAAGCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: TVSFMMISTRST*CRFQRPSKALR
Trigger: CCGCAAGGCTTTGGACGGCCTCTGGAACCGGCACCATGTGGAGCGGGTGGAGATCATCATGAAAGAGACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 72 bp GACATCAGGATGAAAGGCACGCCCTCCCAGCGAAGGTaGTCAATGTGCACTAGGACGGCTGCGAAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: DIRMKGTPSQRR*SMCTRTAAKVG
Trigger: GCCGACCTTCGCAGCCGTCCTAGTGCACATTGACAACCTTCGCTGGGAGGGCGTGCCTTTCATCCTGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 72 bp CGCTTCATCCTGCCCATGACCAGGACTGCCACCTTCTaGGCGCGGTTGATGAGAGGCAGGCTAAGGCTCATG +
Preference number: 6 (lower is better)
Translates to: RFILPMTRTATF*ARLMRGRLRLM
Trigger: CATGAGCCTTAGCCTGCCTCTCATCAACCGCGCCAAGAAGGTGGCAGTCCTGGTCATGGGCAGGATGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 90 bp TGCTCCCAGCAGGATTATGGAGACATGTCCCTGGAGCTCCTGGGCTaGCAGGCAGCCCAGAAGGGCCAAGCACATCGCCACTATGAGCAT +
Preference number: 6 (lower is better)
Translates to: CSQQDYGDMSLELLG*QAAQKGQAHRHYEH
Trigger: ATGCTCATAGTGGCGATGTGCTTGGCCCTTCTGGGCTGCCTGCAAGCCCAGGAGCTCCAGGGACATGTCTCCATAATCCTGCTGGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 90 bp CTCGATGTCCTTGTTCAGGGCCTGATAGTCCTCGGCCGTCTTCAGTaGGCGGTACTGGCTCAGCTGCAGGAACTGATCCTTGTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LDVLVQGLIVLGRLQ*AVLAQLQELILVLC
Trigger: GCAGAGCACAAGGATCAGTTCCTGCAGCTGAGCCAGTACCGCCAACTGAAGACGGCCGAGGACTATCAGGCCCTGAACAAGGACATCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 72 bp GGACCTCCGTCAGATGGTTCTGGAGGACGTCGCGAATaGCACCGTACTCCTCATAGAAGCTGGTGCGGCCTT +
Preference number: 6 (lower is better)
Translates to: GPPSDGSGGRRE*HRTPHRSWCGL
Trigger: AAGGCCGCACCAGCTTCTATGAGGAGTACGGTGTCATTCGCGACGTCCTCCAGAACCATCTGACGGAGGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp GTACTGGCTCAGCTGCAGGAACTGATCCTTGTGCTCTaGACAGTGACTGGGTGCCATGTCCTTGGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: VLAQLQELILVL*TVTGCHVLGAG
Trigger: TCCTGCCCCAAGGACATGGCACCCAGTCACTGTGCAGAGCACAAGGATCAGTTCCTGCAGCTGAGCCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp AGTTCTGTGGCCAGCTGCTGGGCTGAGAAGTGGTCATaGCCAAAGGGTTTCTCAAGGACAACCCGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: SSVASCWAEKWS*PKGFSRTTRSQ
Trigger: CTGGCTGCGGGTTGTCCTTGAGAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 72 bp GCCAGGGGGTTTGGATCAGAATCCAGGTTCCGGCCTTaGTTCTCACACAAGCGGAAGAGGCGTGCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: ARGFGSESRFRP*FSHKRKRRAAV
Trigger: GACAGCTGCACGCCTCTTCCGCTTGTGTGAGAACAAAGGCCGGAACCTGGATTCTGATCCAAACCCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602477.1
CDS TCA 72 bp CCGGCTGCTGCTGGGAAAAGAACAACCGGCCGCTACTaGACTCAAAGTCCAACAGACGGCCATTCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: PAAAGKRTTGRY*TQSPTDGHSQL
Trigger: GAGCTGAGAATGGCCGTCTGTTGGACTTTGAGTTCAGTAGCGGCCGGTTGTTCTTTTCCCAGCAGCAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS GCA 72 bp TCCTCCTGGAAAAAGGTCCCGAGTTCTGTGGCCAGCTaGTGGGCTGAGAAGTGGTCATGGCCAAAGGGTTTC +
Preference number: 6 (lower is better)
Translates to: SSWKKVPSSVAS*WAEKWSWPKGF
Trigger: GAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCTTTTTCCAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp ACATCTCCTCCTCCTGGAAAAAGGTCCCGAGTTCTGTaGCCAGCTGCTGGGCTGAGAAGTGGTCATGGCCAA +
Preference number: 6 (lower is better)
Translates to: TSPPPGKRSRVL*PAAGLRSGHGQ
Trigger: TTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCTTTTTCCAGGAGGAGGAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp GTGGTGATGAAGAAATTCTTCCGGCCATGGAAGATATaGGATAAGAGGACGGAGTGGGCGTCCCGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: VVMKKFFRPWKI*DKRTEWASRSR
Trigger: GCGGGAGCGGGACGCCCACTCCGTCCTCTTATCCCATATCTTCCATGGCCGGAAGAATTTCTTCATCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CAA 72 bp CTTGTTCAGGGCCTGATAGTCCTCGGCCGTCTTCAGTaGGCGGTACTGGCTCAGCTGCAGGAACTGATCCTT +
Preference number: 6 (lower is better)
Translates to: LVQGLIVLGRLQ*AVLAQLQELIL
Trigger: AAGGATCAGTTCCTGCAGCTGAGCCAGTACCGCCAACTGAAGACGGCCGAGGACTATCAGGCCCTGAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 72 bp GAAAAAGGTCCCGAGTTCTGTGGCCAGCTGCTGGGCTaGGAAGTGGTCATGGCCAAAGGGTTTCTCAAGGAC +
Preference number: 6 (lower is better)
Translates to: EKGPEFCGQLLG*EVVMAKGFLKD
Trigger: GTCCTTGAGAAACCCTTTGGCCATGACCACTTCTCAGCCCAGCAGCTGGCCACAGAACTCGGGACCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS TCA 72 bp AGTGCTTTTCGCTCTGCACACAGCAGGCCTGGTTCTTaGACAAGATCCGAGCGTAGCCCACTCTCTCGTCCA +
Preference number: 6 (lower is better)
Translates to: SAFRSAHSRPGS*TRSERSPLSRP
Trigger: TGGACGAGAGAGTGGGCTACGCTCGGATCTTGTTCAAGAACCAGGCCTGCTGTGTGCAGAGCGAAAAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377403.7
ENST00000602477.1
CDS CCA 72 bp TCTGCTAACATCCCAGAAGGTGGGGGCCAGGGGGTTTaGATCAGAATCCAGGTTCCGGCCTTTGTTCTCACA +
Preference number: 6 (lower is better)
Translates to: SANIPEGGGQGV*IRIQVPAFVLT
Trigger: TGTGAGAACAAAGGCCGGAACCTGGATTCTGATCCAAACCCCCTGGCCCCCACCTTCTGGGATGTTAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602477.1