Pregenerated sensors for H4C7 (Homo sapiens)
Ensembl gene IDs: ENSG00000275663Ensembl transcript IDs: ENST00000611444.2
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAACCGCCAAAGCGGCCCAAGATGCGCTTaGCACCGCCATGCCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RAINDIARKGLASLNRQSGPRCA*HRHAGP Trigger: TGGCCCGGCATGGCGGTGTCAAGCGCATCTTGGGCC...GCTTTGGCGGTTAAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR GCA 90 bp | AGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAACCGCCAAAGCCGCTTGACACCGCCATaGCGGGCCAAGCGCCGGATA | + |
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Preference number: 4 (lower is better) Translates to: RAINDIARKGLASLNRQSRLTPP*RAKRRI Trigger: TATCCGGCGCTTGGCCCGGCATGGCGGTGTCAAGCG...GCTTTGGCGGTTAAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR CCA 90 bp | GCGGCCCTGAAAAGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTCTCAGTACCTTGCGATaGCACTTGGCACCGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: AALKRAINDIARKGLASLLSTLR*HLAPPF Trigger: GAAAGGCGGTGCCAAGTGCCATCGCAAGGTACTGAG...AAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCTTTTCAGGGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR CCA 90 bp | AAAGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAACCGCCAAACCTTGCGATGGCACTTaGCACCGCCTTTCCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: KGPLTILQGKAWPHLTAKPCDGT*HRLSQG Trigger: GCCTTGGGAAAGGCGGTGCCAAGTGCCATCGCAAGG...TTTGGCGGTTAAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR GCA 90 bp | GCCCTGAAAAGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAACTATCGCTCAGTACCTTaGGATGGCACTTGGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: ALKRAINDIARKGLASLNYRSVP*DGTWHR Trigger: GCGGTGCCAAGTGCCATCGCAAGGTACTGAGCGATA...GTTAAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCTTTTCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR CCA 90 bp | TACGCGGCCCTGAAAAGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCATTGCAAGGAAAGGCCTaGCCTCACTTAACCGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: YAALKRAINDIARKGLASLQGKA*PHLTAK Trigger: TTTGGCGGTTAAGTGAGGCCAGGCCTTTCCTTGCAA...TGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCTTTTCAGGGCCGCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR CAA 90 bp | GGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAACCGCCAAAGCCAGGCCCAAGATGCGCTaGACACCGCCATGCCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GPLTILQGKAWPHLTAKARPKMR*TPPCRA Trigger: GGCCCGGCATGGCGGTGTCAAGCGCATCTTGGGCCT...GGCTTTGGCGGTTAAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR CAA 90 bp | GGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAACCGCCAAAGCCACCTTGCGATGGCACTaGGCACCGCCTTTCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: GPLTILQGKAWPHLTAKATLRWH*APPFPR Trigger: CCTTGGGAAAGGCGGTGCCAAGTGCCATCGCAAGGT...GGCTTTGGCGGTTAAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR CAA 90 bp | GCGGCCCTGAAAAGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAGGCCTTTTCCGGCCTaGCCCCGAACAGACATGATA | + |
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Preference number: 5 (lower is better) Translates to: AALKRAINDIARKGLASLRPFPA*PRTDMI Trigger: TATCATGTCTGTTCGGGGCAAGGCCGGAAAAGGCCT...AAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCTTTTCAGGGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR CAA 90 bp | CTGAAAAGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAACCGCTTATCGCTCAGTACCTaGCGATGGCACTTGGCACCG | + |
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Preference number: 5 (lower is better) Translates to: LKRAINDIARKGLASLNRLSLST*RWHLAP Trigger: CGGTGCCAAGTGCCATCGCAAGGTACTGAGCGATAA...GCGGTTAAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS-3UTR CAA 90 bp | AGGGCCATTAACGATATTGCAAGGAAAGGCCTGGCCTCACTTAACCGCCAAAGCGGGCCATTAACGATATaGCAAGGAAAGGCCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RAINDIARKGLASLNRQSGPLTI*QGKAWP Trigger: AGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCC...GCTTTGGCGGTTAAGTGAGGCCAGGCCTTTCCTTGCAATATCGTTAATGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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| CDS CAA 72 bp | CACTTGGCACCGCCTTTCCCAAGGCCTTTTCCGGCCTaGCCCCGAACAGACATGATAAACAAGTCAGAACTA | + |
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Preference number: 6 (lower is better) Translates to: HLAPPFPRPFPA*PRTDMINKSEL Trigger: TAGTTCTGACTTGTTTATCATGTCTGTTCGGGGCAAGGCCGGAAAAGGCCTTGGGAAAGGCGGTGCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611444.2 |
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