Pregenerated sensors for H4C5 (Homo sapiens)
Ensembl gene IDs: ENSG00000276966Ensembl transcript IDs: ENST00000615164.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCTCCGCCATTTTaGGCGGTTACGCAGTGTCTTGCGGTTTTCCCACTTATGTCGAAA | + |
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Preference number: 1 (lower is better) Translates to: GPLPGTGFVLRSPPF*AVTQCLAVFPLMSK Trigger: TTTCGACATAAGTGGGAAAACCGCAAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGAAGAACAAAGCCGGTGCCTGGCAATGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR TCA 90 bp | AAGGGCGAGAAAACAGGAAATCAGGGAGGGATAAGGACGCAATCATaGTGGATGAAACATAGGGAGTCTCACGGTCTCGATGCAAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: KGEKTGNQGGIRTQS*WMKHRESHGLDASD Trigger: ATCACTTGCATCGAGACCGTGAGACTCCCTATGTTTCATCCATCATGATTGCGTCCTTATCCCTCCCTGATTTCCTGTTTTCTCGCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR TCA 90 bp | AGAGTCAACCTTACATACAGATTCAGTAGGTTTGGAAAAATTCTATaGGTATTCATGAGGGAGGAGATGAAATCACAAATCCGTCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: RVNLTYRFSRFGKIL*VFMREEMKSQIRLP Trigger: GGGGAGACGGATTTGTGATTTCATCTCCTCCCTCATGAATACTCATAGAATTTTTCCAAACCTACTGAATCTGTATGTAAGGTTGACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR CAA 90 bp | CGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCTCCGCCATTTaGAGCGGTTACGCAGTGTCTTGCGGTTTTCCCACTTATGTCGAA | + |
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Preference number: 2 (lower is better) Translates to: RPIARHRLCSSLSAI*SGYAVSCGFPTYVE Trigger: TTCGACATAAGTGGGAAAACCGCAAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTCCTGAAAAGGGCCTTTaGTTTGGGAAGTCGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: IGCANSRVRPIARHRLCSPEKGL*FGKSRC Trigger: GCATCTCGACTTCCCAAATCAAAGGCCCTTTTCAGG...AGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTGGTTACGCAGTGTCTTaGGGTTTTCCCACTTATGTC | + |
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Preference number: 2 (lower is better) Translates to: IGCANSRVRPIARHRLCSGYAVS*GFPTYV Trigger: GACATAAGTGGGAAAACCGCAAGACACTGCGTAACC...AGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTAAACTCGGTCGTCGCTCTCCGCCATTTTaGGCGGTTACGCAGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SLRELIYPRNFYTPKLGRRSPPF*AVTQCL Trigger: AAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCG...ACGACCGAGTTTAGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGATCTGGTGTTTCAGTTCCTGCCTCAGGCAGGAACATGAGTTCCTAAACAGTCATGAGCTCTTTTaGGGAAAACTGTGGGCGGCC | + |
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Preference number: 2 (lower is better) Translates to: QVIWCFSSCLRQEHEFLNSHELF*GKLWAA Trigger: GGCCGCCCACAGTTTTCCGCAAAAGAGCTCATGACT...GTTTAGGAACTCATGTTCCTGCCTGAGGCAGGAACTGAAACACCAGATCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTGCAACCTCTCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTTCGTCTAACAAGTCATaGGCTCTTTTGCGGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: ACNLSLRELIYPRNFYTPSSNKS*ALLRKT Trigger: AGTTTTCCGCAAAAGAGCTCATGACTTGTTAGACGA...AGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGAGAGGTTGCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGATCTGGTGTTTCAGTTCCTGCCTCAGGCAGGAACATGAGTTCCTAAACAAAGGGCCTTTGATTTaGGAAGTCGAGATGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: QVIWCFSSCLRQEHEFLNKGPLI*EVEMLS Trigger: ACTCAGCATCTCGACTTCCCAAATCAAAGGCCCTTT...GTTTAGGAACTCATGTTCCTGCCTGAGGCAGGAACTGAAACACCAGATCACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR GCA 90 bp | ACACACCTAAACTCGGTCGTTAGGTTAAGTAATAGAAAACAGGCCGCTAGAATTAGGAAGATGATTGGTTaGGCTAATTCGCGGGTCCGG | + |
|
Preference number: 2 (lower is better) Translates to: THLNSVVRLSNRKQAARIRKMIG*ANSRVR Trigger: CCGGACCCGCGAATTAGCGCAACCAATCATCTTCCT...AATTCTAGCGGCCTGTTTTCTATTACTTAACCTAACGACCGAGTTTAGGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTAAACTCGGTCGTCGCGGGTCCGGCCCATaGCCAGGCACCGGCTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: SLRELIYPRNFYTPKLGRRGSGP*PGTGFV Trigger: AACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCG...ACGACCGAGTTTAGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR TCA 72 bp | CCAGGCACCGGCTTTGTTCTTCGCTCTCCGCCATTTTaGGCGGTTACGCAGTGTCTTGCGGTTTTCCCACTT | + |
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Preference number: 3 (lower is better) Translates to: PGTGFVLRSPPF*AVTQCLAVFPL Trigger: AAGTGGGAAAACCGCAAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGAAGAACAAAGCCGGTGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTCCAGGAAGATGATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCGGTTACGCAGTGTCTaGCGGTTTTCCCACTTATGT | + |
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Preference number: 3 (lower is better) Translates to: LSRKMIGCANSRVRPIARRLRSV*RFSHLC Trigger: ACATAAGTGGGAAAACCGCAAGACACTGCGTAACCG...CCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAATCATCTTCCTGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTTCGCTCTCCGCCATTTTGAGCGGTTACGCAGTGTCTTGCGGTTTTCCCAAAAGGGCCTTTGATTaGGGAAGTCGAGATGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: CSSLSAILSGYAVSCGFPKRAFD*GSRDAE Trigger: CTCAGCATCTCGACTTCCCAAATCAAAGGCCCTTTT...GGGAAAACCGCAAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGAAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR CCA 72 bp | AACATAGGGAGTCTCACGGTCTCGATGCAAGTGATCTaGTGTTTCAGTTCCTGCCTCAGGCAGGAACATGAG | + |
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Preference number: 3 (lower is better) Translates to: NIGSLTVSMQVI*CFSSCLRQEHE Trigger: CTCATGTTCCTGCCTGAGGCAGGAACTGAAACACCAGATCACTTGCATCGAGACCGTGAGACTCCCTATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR GCA 72 bp | ACGGTCTCGATGCAAGTGATCTGGTGTTTCAGTTCCTaGCTCAGGCAGGAACATGAGTTCCTAAACATGAGT | + |
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Preference number: 3 (lower is better) Translates to: TVSMQVIWCFSS*LRQEHEFLNMS Trigger: ACTCATGTTTAGGAACTCATGTTCCTGCCTGAGGCAGGAACTGAAACACCAGATCACTTGCATCGAGACCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR CCA 72 bp | GGATGGAATGAGCGCTCTGTGGCAGTGAAGGGGAGCTaGAATATATATATGCCTTACAGAGTCAACCTTACA | + |
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Preference number: 3 (lower is better) Translates to: GWNERSVAVKGS*NIYMPYRVNLT Trigger: TGTAAGGTTGACTCTGTAAGGCATATATATATTCCAGCTCCCCTTCACTGCCACAGAGCGCTCATTCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR TCA 72 bp | ACTTATAAAGAGACCAACCAATCGTCTAACAAGTCATaGGCTCTTTTGCGGAAAACTGTGGGCGGCCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: TYKETNQSSNKS*ALLRKTVGGPE Trigger: TTCAGGGCCGCCCACAGTTTTCCGCAAAAGAGCTCATGACTTGTTAGACGATTGGTTGGTCTCTTTATAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR TCA 72 bp | AAAACAGGAAATCAGGGAGGGATAAGGACGCAATCATaGTGGATGAAACATAGGGAGTCTCACGGTCTCGAT | + |
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Preference number: 3 (lower is better) Translates to: KTGNQGGIRTQS*WMKHRESHGLD Trigger: ATCGAGACCGTGAGACTCCCTATGTTTCATCCATCATGATTGCGTCCTTATCCCTCCCTGATTTCCTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR TCA 72 bp | AAGGGACAACTGGGTTGGCTTAATAGAATTCCGAAATaGATGCTTGCAACCTCTCCTTGCGTGAGCTTATCT | + |
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Preference number: 3 (lower is better) Translates to: KGQLGWLNRIPK*MLATSPCVSLS Trigger: AGATAAGCTCACGCAAGGAGAGGTTGCAAGCATTCATTTCGGAATTCTATTAAGCCAACCCAGTTGTCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| 3UTR TCA 72 bp | GATCTGGTGTTTCAGTTCCTGCCTCAGGCAGGAACATaGGTTCCTAAACATGAGTTCCTAAACATTTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DLVFQFLPQAGT*VPKHEFLNICL Trigger: GAGACAAATGTTTAGGAACTCATGTTTAGGAACTCATGTTCCTGCCTGAGGCAGGAACTGAAACACCAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR GCA 90 bp | ATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTGCGGGTCCGGCCCATTaGCAGGCACCGGCTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: IGCANSRVRPIARHRLCSAGPAH*QAPALF Trigger: GAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGC...AGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR GCA 90 bp | AATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCTCCGCCAGGAAGATGATTGGTTaGGCTAATTCGCGGGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: NSRVRPIARHRLCSSLSARKMIG*ANSRVR Trigger: CCGGACCCGCGAATTAGCGCAACCAATCATCTTCCT...GGCGGAGAGCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | TGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCCAACCTCTCCTTGCGTaGGCTTATCTACCCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: CANSRVRPIARHRLCSSLQPLLA*AYLPQE Trigger: TTCCTGGGGTAGATAAGCTCACGCAAGGAGAGGTTG...GAGCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | GTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCCTTTCCAGGAAGATaGTTGGTTGCGCTAATTCGC | + |
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Preference number: 4 (lower is better) Translates to: VALIRGSGPLPGTGFVLRSFPGR*LVALIR Trigger: GCGAATTAGCGCAACCAATCATCTTCCTGGAAAGGA...GCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CCA 90 bp | ATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCTCCGCCAAAAGGGCCTTTGATTTaGGAAGTCGAGATGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: IRGSGPLPGTGFVLRSPPKGPLI*EVEMLS Trigger: ACTCAGCATCTCGACTTCCCAAATCAAAGGCCCTTT...TGGCGGAGAGCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | AATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCTCCGCCATAGCCGCAAAAATCTaGAAAACAAGCGACGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: NSRVRPIARHRLCSSLSAIAAKI*KTSDGS Trigger: ACTACCGTCGCTTGTTTTTCAGATTTTTGCGGCTAT...GGCGGAGAGCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | TCGCTCTCCGCCATTTTGAGCGGTTACGCAGTGTCTTGCGGTTTTCCCACTTATCGCTCTCCGCCATTTTaGGCGGTTACGCAGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SLSAILSGYAVSCGFPTYRSPPF*AVTQCL Trigger: AAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCG...ATAAGTGGGAAAACCGCAAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | CTTTCCAGGAAGATGATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCCTCAGGCAGGAACATaGGTTCCTAAACATGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LSRKMIGCANSRVRPIARPQAGT*VPKHEF Trigger: GAACTCATGTTTAGGAACTCATGTTCCTGCCTGAGG...CCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAATCATCTTCCTGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR GCA 90 bp | GTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCGGTAGTATTCTTATATaGCGGGAATTCGGACCTAAA | + |
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Preference number: 4 (lower is better) Translates to: VALIRGSGPLPGTGFVLRGSILI*REFGPK Trigger: TTTAGGTCCGAATTCCCGGCATATAAGAATACTACC...GCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | GCTTGCAACCTCTCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTTGCCGCGACCAGACATaGCCAACACACCAACGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ACNLSLRELIYPRNFYTPCRDQT*PTHQRK Trigger: TTTTCGTTGGTGTGTTGGTCATGTCTGGTCGCGGCA...AGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGAGAGGTTGCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | ATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGTCTAACAAGTCATaGGCTCTTTTGCGGAAAACT | + |
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Preference number: 4 (lower is better) Translates to: IGCANSRVRPIARHRLCSSSNKS*ALLRKT Trigger: AGTTTTCCGCAAAAGAGCTCATGACTTGTTAGACGA...AGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | GCTTGCAACCTCTCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTCGGTCTCGATGCAAGTaGTCTGGTGTTTCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ACNLSLRELIYPRNFYTPRSRCK*SGVSVP Trigger: AGGAACTGAAACACCAGATCACTTGCATCGAGACCG...AGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGAGAGGTTGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | TGTTCTTCGCTCTCCGCCATTTTGAGCGGTTACGCAGTGTCTTGCGGTTTTCCCCGCAATCATGATGGATaGAACATAGGGAGTCTCACG | + |
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Preference number: 4 (lower is better) Translates to: CSSLSAILSGYAVSCGFPRNHDG*NIGSLT Trigger: CGTGAGACTCCCTATGTTTCATCCATCATGATTGCG...GGGAAAACCGCAAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGAAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CCA 90 bp | CTTTCCAGGAAGATGATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGGCAGTGAAGGGGAGCTaGAATATATATATGCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LSRKMIGCANSRVRPIARAVKGS*NIYMPY Trigger: GTAAGGCATATATATATTCCAGCTCCCCTTCACTGC...CCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAATCATCTTCCTGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | TCTCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTAAACTCGGTCCCTGAAAAGGGCCTTTaGTTTGGGAAGTCGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: SPCVSLSTPGTSTHLNSVPEKGL*FGKSRC Trigger: GCATCTCGACTTCCCAAATCAAAGGCCCTTTTCAGG...GACCGAGTTTAGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR GCA 90 bp | TCGCTCTCCGCCATTTTGAGCGGTTACGCAGTGTCTTGCGGTTTTCCCACTTATTCCGAAATGAATGCTTaGAACCTCTCCTTGCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SLSAILSGYAVSCGFPTYSEMNA*NLSLRE Trigger: CTCACGCAAGGAGAGGTTGCAAGCATTCATTTCGGA...ATAAGTGGGAAAACCGCAAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR GCA 90 bp | TCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTAAACTCGGTCGTGGTTACGCAGTGTCTTaGGGTTTTCCCACTTATGTC | + |
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Preference number: 4 (lower is better) Translates to: SLRELIYPRNFYTPKLGRGYAVS*GFPTYV Trigger: GACATAAGTGGGAAAACCGCAAGACACTGCGTAACC...ACGACCGAGTTTAGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | GCTTGCAACCTCTCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTAATAGAATTCCGAAATaGATGCTTGCAACCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ACNLSLRELIYPRNFYTPNRIPK*MLATSP Trigger: AGGAGAGGTTGCAAGCATTCATTTCGGAATTCTATT...AGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGAGAGGTTGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | TCTACCCCAGGAACTTCTACACACCTAAACTCGGTCGTTAGGTTAAGTAATAGAAATCCCAGGATGGAATaGGCGCTCTGTGGCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: STPGTSTHLNSVVRLSNRNPRME*ALCGSE Trigger: TTCACTGCCACAGAGCGCTCATTCCATCCTGGGATT...TCTATTACTTAACCTAACGACCGAGTTTAGGTGTGTAGAAGTTCCTGGGGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR GCA 90 bp | TCTACCCCAGGAACTTCTACACACCTAAACTCGGTCGTTAGGTTAAGTAATAGAAGTCATGAGCTCTTTTaGGGAAAACTGTGGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: STPGTSTHLNSVVRLSNRSHELF*GKLWAA Trigger: GGCCGCCCACAGTTTTCCGCAAAAGAGCTCATGACT...TCTATTACTTAACCTAACGACCGAGTTTAGGTGTGTAGAAGTTCCTGGGGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CCA 90 bp | TCGCTCTCCGCCATTTTGAGCGGTTACGCAGTGTCTTGCGGTTTTCCCACTTATCTTCTAAGGGACAACTaGGTTGGCTTAATAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: SLSAILSGYAVSCGFPTYLLRDN*VGLIEF Trigger: GAATTCTATTAAGCCAACCCAGTTGTCCCTTAGAAG...ATAAGTGGGAAAACCGCAAGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR GCA 90 bp | TCTACCCCAGGAACTTCTACACACCTAAACTCGGTCGTTAGGTTAAGTAATAGACTTGCAACCTCTCCTTaGGTGAGCTTATCTACCCCA | + |
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Preference number: 4 (lower is better) Translates to: STPGTSTHLNSVVRLSNRLATSP*VSLSTP Trigger: TGGGGTAGATAAGCTCACGCAAGGAGAGGTTGCAAG...TCTATTACTTAACCTAACGACCGAGTTTAGGTGTGTAGAAGTTCCTGGGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR TCA 90 bp | CAAGTGATCTGGTGTTTCAGTTCCTGCCTCAGGCAGGAACATGAGTTCCTAAACTTTGGAAAAATTCTATaGGTATTCATGAGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QVIWCFSSCLRQEHEFLNFGKIL*VFMREE Trigger: CTCCTCCCTCATGAATACTCATAGAATTTTTCCAAA...GTTTAGGAACTCATGTTCCTGCCTGAGGCAGGAACTGAAACACCAGATCACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR GCA 90 bp | ACACACCTAAACTCGGTCGTTAGGTTAAGTAATAGAAAACAGGCCGCTAGAATTGCTGGAATATATATATaGCTTACAGAGTCAACCTTA | + |
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Preference number: 4 (lower is better) Translates to: THLNSVVRLSNRKQAARIAGIYI*LTESTL Trigger: TAAGGTTGACTCTGTAAGGCATATATATATTCCAGC...AATTCTAGCGGCCTGTTTTCTATTACTTAACCTAACGACCGAGTTTAGGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CAA 90 bp | TGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCCGCGGGTCCGGCCCATaGCCAGGCACCGGCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: CANSRVRPIARHRLCSSLRGSGP*PGTGFV Trigger: AACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCG...GAGCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CAA 90 bp | CTTTCCAGGAAGATGATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGTGCCAGGCACCGGCTTaGTTCTTCGCTCTCCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LSRKMIGCANSRVRPIARCQAPA*FFALRH Trigger: ATGGCGGAGAGCGAAGAACAAAGCCGGTGCCTGGCA...CCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAATCATCTTCCTGGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CAA 90 bp | AATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCTCCGCCAAAAGGGCCTTTGATTaGGGAAGTCGAGATGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: NSRVRPIARHRLCSSLSAKRAFD*GSRDAE Trigger: CTCAGCATCTCGACTTCCCAAATCAAAGGCCCTTTT...GGCGGAGAGCGAAGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CAA 90 bp | ATTGGTTGCGCTAATTCGCGGGTCCGGCCCATTGCCAGGCACCGGCTTTGTTCTTCGCTCTCCGCCATTTaGAGCGGTTACGCAGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: IGCANSRVRPIARHRLCSSLSAI*SGYAVS Trigger: AGACACTGCGTAACCGCTCAAAATGGCGGAGAGCGA...AGAACAAAGCCGGTGCCTGGCAATGGGCCGGACCCGCGAATTAGCGCAACCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CAA 90 bp | GCTTGCAACCTCTCCTTGCGTGAGCTTATCTACCCCAGGAACTTCTACACACCTCGGTTACGCAGTGTCTaGCGGTTTTCCCACTTATGT | + |
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Preference number: 5 (lower is better) Translates to: ACNLSLRELIYPRNFYTPRLRSV*RFSHLC Trigger: ACATAAGTGGGAAAACCGCAAGACACTGCGTAACCG...AGGTGTGTAGAAGTTCCTGGGGTAGATAAGCTCACGCAAGGAGAGGTTGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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| CDS-3UTR CAA 90 bp | ACACACCTAAACTCGGTCGTTAGGTTAAGTAATAGAAAACAGGCCGCTAGAATTGCTTGCAACCTCTCCTaGCGTGAGCTTATCTACCCC | + |
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Preference number: 5 (lower is better) Translates to: THLNSVVRLSNRKQAARIACNLS*RELIYP Trigger: GGGGTAGATAAGCTCACGCAAGGAGAGGTTGCAAGC...AATTCTAGCGGCCTGTTTTCTATTACTTAACCTAACGACCGAGTTTAGGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615164.2 |
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