Pregenerated sensors for H3Y2 (Homo sapiens)
Ensembl gene IDs: ENSG00000268799Ensembl transcript IDs: ENST00000600799.3
Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TACCTTGGGAGCCTCAAAGTAGATGAGACGTTTACTAACAAGCACACACAAACACTGCCACCTGATTTCTaGCTGCGTTTCCACTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: YLGSLKVDETFTNKHTQTLPPDF*LRFHWQ Trigger: TTGCCAGTGGAAACGCAGGCAGAAATCAGGTGGCAG...TGTTTGTGTGTGCTTGTTAGTAAACGTCTCATCTACTTTGAGGCTCCCAAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600799.3 |
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| CDS-3UTR CCA 90 bp | TACCTTGGGAGCCTCAAAGTAGATGAGACGTTTACTAACAAGCACACACAAACAGTGCGCGCCATGTTGTaGGGCCTTGTGCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLGSLKVDETFTNKHTQTVRAML*GLVLSP Trigger: AGGAGAGAGCACAAGGCCCCACAACATGGCGCGCAC...TGTTTGTGTGTGCTTGTTAGTAAACGTCTCATCTACTTTGAGGCTCCCAAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600799.3 |
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| CDS-3UTR CCA 90 bp | TACCTTGGGAGCCTCAAAGTAGATGAGACGTTTACTAACAAGCACACACAAACACTTCCCGGAAGGTCTTaGGTTTCCTTGGTCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLGSLKVDETFTNKHTQTLPGRS*VSLVYP Trigger: TGGGTAGACCAAGGAAACCCAAGACCTTCCGGGAAG...TGTTTGTGTGTGCTTGTTAGTAAACGTCTCATCTACTTTGAGGCTCCCAAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600799.3 |
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| CDS-3UTR TCA 90 bp | TACCTTGGGAGCCTCAAAGTAGATGAGACGTTTACTAACAAGCACACACAAACAAACACAACTGCCACCTaGTTTCTGCCTGCGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLGSLKVDETFTNKHTQTNTTAT*FLPAFP Trigger: TGGAAACGCAGGCAGAAATCAGGTGGCAGTTGTGTT...TGTTTGTGTGTGCTTGTTAGTAAACGTCTCATCTACTTTGAGGCTCCCAAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600799.3 |
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| CDS-3UTR TCA 90 bp | TACCTTGGGAGCCTCAAAGTAGATGAGACGTTTACTAACAAGCACACACAAACATTTATAGAGTTGAACTaGAACTCGCTCACAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YLGSLKVDETFTNKHTQTFIELN*NSLTET Trigger: TGTCTCTGTGAGCGAGTTTCAGTTCAACTCTATAAA...TGTTTGTGTGTGCTTGTTAGTAAACGTCTCATCTACTTTGAGGCTCCCAAGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600799.3 |
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| CDS-3UTR CAA 90 bp | TACCTTGGGAGCCTCAAAGTAGATGAGACGTTTACTAACAAGCACACACAAACATCTTCCCGGAAGGTCTaGGGTTTCCTTGGTCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: YLGSLKVDETFTNKHTQTSSRKV*GFLGLP Trigger: GGGTAGACCAAGGAAACCCAAGACCTTCCGGGAAGA...TGTTTGTGTGTGCTTGTTAGTAAACGTCTCATCTACTTTGAGGCTCCCAAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600799.3 |
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| CDS-3UTR CAA 90 bp | TACCTTGGGAGCCTCAAAGTAGATGAGACGTTTACTAACAAGCACACACAAACACAGAGACATTTCCACTaGACACTAGTACCTTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: YLGSLKVDETFTNKHTQTQRHFH*TLVPWE Trigger: CTCCCAAGGTACTAGTGTCAAGTGGAAATGTCTCTG...TGTTTGTGTGTGCTTGTTAGTAAACGTCTCATCTACTTTGAGGCTCCCAAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600799.3 |
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