Pregenerated sensors for H3C8 (Homo sapiens)
Ensembl gene IDs: ENSG00000273983Ensembl transcript IDs: ENST00000614378.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTGTGCTAATCTGTAAAGGAAGGGTTCTATATGAAAACATATCTTaGTTGTATGCCAAGCAGCCCAGGATGGTATGTGTTCCTCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LVLICKGRVLYENIS*LYAKQPRMVCVPPC Trigger: ACAAGGAGGAACACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAACCCTTCCTTTACAGATTAGCACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTTGTAACATCCCTAAAAACCTGATACTTCCAATCACTAAAAGGACCTCGATAAACGCCCCCAGGTaGCCCCTTCCACTACCAAAT | + |
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Preference number: 2 (lower is better) Translates to: PPCNIPKNLILPITKRTSINAPR*PLPLPN Trigger: ATTTGGTAGTGGAAGGGGCCACCTGGGGGCGTTTAT...CGAGGTCCTTTTAGTGATTGGAAGTATCAGGTTTTTAGGGATGTTACAAGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTTCAGACACGAAAAAGCAGCAACCAAGGATATCCCTACCTACTCTCAACAACGCGACTAACGCTTaGGACAATGTATATAAACGC | + |
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Preference number: 2 (lower is better) Translates to: AASDTKKQQPRISLPTLNNATNA*DNVYKR Trigger: GCGTTTATATACATTGTCTCAAGCGTTAGTCGCGTT...GTTGAGAGTAGGTAGGGATATCCTTGGTTGCTGCTTTTTCGTGTCTGAAGCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR CAA 90 bp | GTGCTAATCTGTAAAGGAAGGGTTCTATATGAAAACATATCTTGGTaGTATGCCAAGCAGCCCAGGATGGTATGTGTTCCTCCTTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: VLICKGRVLYENISW*YAKQPRMVCVPPCN Trigger: GTTACAAGGAGGAACACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAACCCTTCCTTTACAGATTAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTCATGAGAATCATCTGAGGTATATGCAGATTGACTCCAGCCCTAGATGGAATTGTGGAAATAGCTaGTTCAGACACGAAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SVHENHLRYMQIDSSPRWNCGNS*FRHEKA Trigger: TGCTTTTTCGTGTCTGAAGCAGCTATTTCCACAATT...CCATCTAGGGCTGGAGTCAATCTGCATATACCTCAGATGATTCTCATGAACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGCCAAGCAGCCCAGGATaGTATGTGTTCCTCCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGPSSPG*YVFLLV Trigger: TACAAGGAGGAACACATACCATCCTGGGCTGCTTGG...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAGAGACCAGTATATTCTCTCTGAAGGCAAACTACAAGGAAACTGATTCAATAATTACCATTCCCTaGGCCCACTCTAGATTGCTA | + |
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Preference number: 2 (lower is better) Translates to: SLETSIFSLKANYKETDSIITIP*AHSRLL Trigger: TAGCAATCTAGAGTGGGCCCAGGGAATGGTAATTAT...TGAATCAGTTTCCTTGTAGTTTGCCTTCAGAGAGAATATACTGGTCTCTAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGAGAGCCTTTTTAAGTTaGATAGAATTACTGCCCGGA | + |
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Preference number: 2 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGRAFLS*IELLPG Trigger: TCCGGGCAGTAATTCTATCCAACTTAAAAAGGCTCT...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR CCA 72 bp | CTAACGCTTGAGACAATGTATATAAACGCCCCCAGGTaGCCCCTTCCACTACCAAATCGAAGCTCCAAACCC | + |
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Preference number: 3 (lower is better) Translates to: LTLETMYINAPR*PLPLPNRSSKP Trigger: GGGTTTGGAGCTTCGATTTGGTAGTGGAAGGGGCCACCTGGGGGCGTTTATATACATTGTCTCAAGCGTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTGTAAGAGTTCACAGGCAGGATGCCTTTACTGATGAGACCAAAACCAACAAGAGCCTTTTTAAGTaGGATAGAATTACTGCCCGG | + |
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Preference number: 3 (lower is better) Translates to: LLVRVHRQDAFTDETKTNKSLFK*DRITAR Trigger: CCGGGCAGTAATTCTATCCAACTTAAAAAGGCTCTT...GTTGGTTTTGGTCTCATCAGTAAAGGCATCCTGCCTGTGAACTCTTACAAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR TCA 72 bp | TGGTATGTGTTCCTCCTTGTAACATCCCTAAAAACCTaGTACTTCCAATCACTAAAAGGACCTCGGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: WYVFLLVTSLKT*YFQSLKGPRWF Trigger: GAACCACCGAGGTCCTTTTAGTGATTGGAAGTATCAGGTTTTTAGGGATGTTACAAGGAGGAACACATACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR CCA 72 bp | AAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATaGTATGTGTTCCTCCTTGTAACATCCCTAAAAACC | + |
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Preference number: 3 (lower is better) Translates to: KTYLGCMPSSPG*YVFLLVTSLKT Trigger: GGTTTTTAGGGATGTTACAAGGAGGAACACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR CCA 72 bp | ATCTGTAAAGGAAGGGTTCTATATGAAAACATATCTTaGTTGTATGCCAAGCAGCCCAGGATGGTATGTGTT | + |
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Preference number: 3 (lower is better) Translates to: ICKGRVLYENIS*LYAKQPRMVCV Trigger: AACACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAACCCTTCCTTTACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR-3UTR CAA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGAACTATTTTAGGGGATaGTTCTGTGCACTTGCTTTA | + |
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Preference number: 3 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGNYFRG*FCALAL Trigger: TAAAGCAAGTGCACAGAACAATCCCCTAAAATAGTT...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | GCTGCTTCAGACACGAAAAAGCAGCAACCAAGGATATCCCTACCTACTCTCAACCTTGTGCCGTTTTCTTaGGTCACCTGGACTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AASDTKKQQPRISLPTLNLVPFS*VTWTAA Trigger: AGCAGCAGTCCAGGTGACTCAAGAAAACGGCACAAG...GTTGAGAGTAGGTAGGGATATCCTTGGTTGCTGCTTTTTCGTGTCTGAAGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | AGTGTTCATGAGAATCATCTGAGGTATATGCAGATTGACTCCAGCCCTAGATGGGACTCCAGCCCTAGATaGGGATTGAAACAAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SVHENHLRYMQIDSSPRWDSSPR*GLKQAP Trigger: GGGAGCTTGTTTCAATCCCCATCTAGGGCTGGAGTC...CCATCTAGGGCTGGAGTCAATCTGCATATACCTCAGATGATTCTCATGAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | GAAGGGTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGCGGAGGACCACGTTTTaGGAAGTTTATCTTGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: EGFYMKTYLGCMPSSPGWRRTTF*EVYLVP Trigger: CGGCACAAGATAAACTTCTCAAAACGTGGTCCTCCG...CCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAACCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR GCA 90 bp | ACCCCAGGTAAAGATTTTTCTAAAGCCTTCCCATGTGACTGTAATGTTACATTGGACTTGCGTGCAGTCTaGTTGGTGCGGGCCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: TPGKDFSKAFPCDCNVTLDLRAV*LVRAIS Trigger: TGAGATGGCCCGCACCAAGCAGACTGCACGCAAGTC...CAATGTAACATTACAGTCACATGGGAAGGCTTTAGAAAAATCTTTACCTGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | GAAGGGTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGCCAAGCAGCCCAGGATaGTATGTGTTCCTCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: EGFYMKTYLGCMPSSPGWPSSPG*YVFLLV Trigger: TACAAGGAGGAACACATACCATCCTGGGCTGCTTGG...CCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAACCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | AGTGTTCATGAGAATCATCTGAGGTATATGCAGATTGACTCCAGCCCTAGATGGCCATCTCAGACTACCTaGAAGAAAAACTCAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SVHENHLRYMQIDSSPRWPSQTT*KKNSAT Trigger: AGTGGCTGAGTTTTTCTTTCAGGTAGTCTGAGATGG...CCATCTAGGGCTGGAGTCAATCTGCATATACCTCAGATGATTCTCATGAACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR GCA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGGTGCAGTCTGCTTGGTaGGGGCCATCTCAGACTACC | + |
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Preference number: 4 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGVQSAW*GPSQTT Trigger: GGTAGTCTGAGATGGCCCGCACCAAGCAGACTGCAC...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR GCA 90 bp | AAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGCCTTGTGCTAATCTGCATATCTTGGTTGTATaGCAAGCAGCCCAGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: KIIKKDLLNTQTGPCANLHILVV*QAAQDG Trigger: ACCATCCTGGGCTGCTTGGCATACAACCAAGATATG...CAGATTAGCACAAGGCCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | CTCCTTGTAAGAGTTCACAGGCAGGATGCCTTTACTGATGAGACCAAAACCAACAAGAGTCCAACGATGTaGTTGGTGAATTACTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLVRVHRQDAFTDETKTNKSPTM*LVNYWK Trigger: TTTCCAGTAATTCACCAATCACATCGTTGGACTCTT...GTTGGTTTTGGTCTCATCAGTAAAGGCATCCTGCCTGTGAACTCTTACAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | GAAGGGTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGAACAAAACCATTGGCTaGAGAGTCCAACGATGTGAT | + |
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Preference number: 4 (lower is better) Translates to: EGFYMKTYLGCMPSSPGWNKTIG*RVQRCD Trigger: ATCACATCGTTGGACTCTTCAGCCAATGGTTTTGTT...CCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAACCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | AGTGTTCATGAGAATCATCTGAGGTATATGCAGATTGACTCCAGCCCTAGATGGAACGCGACTAACGCTTaGGACAATGTATATAAACGC | + |
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Preference number: 4 (lower is better) Translates to: SVHENHLRYMQIDSSPRWNATNA*DNVYKR Trigger: GCGTTTATATACATTGTCTCAAGCGTTAGTCGCGTT...CCATCTAGGGCTGGAGTCAATCTGCATATACCTCAGATGATTCTCATGAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | GTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGTATGTGCCCTAGATGGGGATTaGAACAAGCTCCCATGTAAT | + |
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Preference number: 4 (lower is better) Translates to: VLYENISWLYAKQPRMVCALDGD*NKLPCN Trigger: ATTACATGGGAGCTTGTTTCAATCCCCATCTAGGGC...ACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR GCA 90 bp | GCTGCTTCAGACACGAAAAAGCAGCAACCAAGGATATCCCTACCTACTCTCAACAATTGTGGAAATAGCTaGTTCAGACACGAAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: AASDTKKQQPRISLPTLNNCGNS*FRHEKA Trigger: TGCTTTTTCGTGTCTGAAGCAGCTATTTCCACAATT...GTTGAGAGTAGGTAGGGATATCCTTGGTTGCTGCTTTTTCGTGTCTGAAGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | TCTTTAGAGACCAGTATATTCTCTCTGAAGGCAAACTACAAGGAAACTGATTCAATAAACGCCCCCAGGTaGCCCCTTCCACTACCAAAT | + |
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Preference number: 4 (lower is better) Translates to: SLETSIFSLKANYKETDSINAPR*PLPLPN Trigger: ATTTGGTAGTGGAAGGGGCCACCTGGGGGCGTTTAT...TGAATCAGTTTCCTTGTAGTTTGCCTTCAGAGAGAATATACTGGTCTCTAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR GCA 90 bp | CCTCCTTGTAACATCCCTAAAAACCTGATACTTCCAATCACTAAAAGGACCTCGTCTTCTCGGTTAGTCTaGGATCCAAGAACGTTAACT | + |
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Preference number: 4 (lower is better) Translates to: PPCNIPKNLILPITKRTSSSRLV*DPRTLT Trigger: AGTTAACGTTCTTGGATCGCAGACTAACCGAGAAGA...CGAGGTCCTTTTAGTGATTGGAAGTATCAGGTTTTTAGGGATGTTACAAGGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| 3UTR CAA 72 bp | TGTAAAGGAAGGGTTCTATATGAAAACATATCTTGGTaGTATGCCAAGCAGCCCAGGATGGTATGTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: CKGRVLYENISW*YAKQPRMVCVP Trigger: AGGAACACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAACCCTTCCTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | GAAGGGTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGGAATCACTTCATTTTTaGATCCTCTCTTCTCGGTTA | + |
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Preference number: 4 (lower is better) Translates to: EGFYMKTYLGCMPSSPGWESLHF*ILSSRL Trigger: TAACCGAGAAGAGAGGATTCAAAAATGAAGTGATTC...CCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAACCCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | GTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGTATGTATAAAAGCCAGGTGTTaGAAGATAGTCAAGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLYENISWLYAKQPRMVCIKARC*KIVKQA Trigger: GGCTTGCTTGACTATCTTTCAACACCTGGCTTTTAT...ACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR GCA 90 bp | AAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGCCTTGTGCTAATCTGGAGAAGTTTATCTTGTaGCGTTTTCTTGAGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: KIIKKDLLNTQTGPCANLEKFIL*RFLESP Trigger: AGGTGACTCAAGAAAACGGCACAAGATAAACTTCTC...CAGATTAGCACAAGGCCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGGCGCAACAAAACCATTaGCTGAAGAGTCCAACGATG | + |
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Preference number: 4 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGAQQNH*LKSPTM Trigger: CATCGTTGGACTCTTCAGCCAATGGTTTTGTTGCGC...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | GTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGTATGTAGAGCCTTTTTAAGTTaGATAGAATTACTGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: VLYENISWLYAKQPRMVCRAFLS*IELLPG Trigger: TCCGGGCAGTAATTCTATCCAACTTAAAAAGGCTCT...ACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | AAAAGCACGGGAACAAATATAGCAAGCTTACCATTAACTTTAGCCAATCAAATGTCCCATGTAATGCCCTaGGAGCTTCTAACAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KSTGTNIASLPLTLANQMSHVMP*ELLTSS Trigger: GGAACTTGTTAGAAGCTCCCAGGGCATTACATGGGA...CATTTGATTGGCTAAAGTTAATGGTAAGCTTGCTATATTTGTTCCCGTGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | GTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGTATGTTATGAAAACATATCTTaGTTGTATGCCAAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VLYENISWLYAKQPRMVCYENIS*LYAKQP Trigger: GGGCTGCTTGGCATACAACCAAGATATGTTTTCATA...ACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGTCTAATTGGCCTTGTTaGTTTTCAAAAGACCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGSNWPC*FSKDPR Trigger: GCGCGGGTCTTTTGAAAATCAACAAGGCCAATTAGA...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR TCA 90 bp | GTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGTATGTTTCATGAGAATCATCTaGGGTATATGCAGATTGACT | + |
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Preference number: 4 (lower is better) Translates to: VLYENISWLYAKQPRMVCFMRII*GICRLT Trigger: AGTCAATCTGCATATACCTCAGATGATTCTCATGAA...ACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR GCA 90 bp | TCTTTAGAGACCAGTATATTCTCTCTGAAGGCAAACTACAAGGAAACTGATTCATGGCAGAGTGGAAACTaGCCTTATATATACTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SLETSIFSLKANYKETDSWQSGN*PYIYSE Trigger: TTCTGAGTATATATAAGGGCAGTTTCCACTCTGCCA...TGAATCAGTTTCCTTGTAGTTTGCCTTCAGAGAGAATATACTGGTCTCTAAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGTGGACTGCTGCTAGCTaGAAACCTTTGACCATTATA | + |
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Preference number: 4 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGWTAAS*KPLTII Trigger: TATAATGGTCAAAGGTTTCCAGCTAGCAGCAGTCCA...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CCA 90 bp | AAAAGCACGGGAACAAATATAGCAAGCTTACCATTAACTTTAGCCAATCAAATGATAATTACCATTCCCTaGGCCCACTCTAGATTGCTA | + |
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Preference number: 4 (lower is better) Translates to: KSTGTNIASLPLTLANQMIITIP*AHSRLL Trigger: TAGCAATCTAGAGTGGGCCCAGGGAATGGTAATTAT...CATTTGATTGGCTAAAGTTAATGGTAAGCTTGCTATATTTGTTCCCGTGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | AAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGCCTTGTGCTAATCTGTTGCGTGCAGTCTGCTaGGTGCGGGCCATCTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: KIIKKDLLNTQTGPCANLLRAVC*VRAISD Trigger: GTCTGAGATGGCCCGCACCAAGCAGACTGCACGCAA...CAGATTAGCACAAGGCCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | AGTGTTCATGAGAATCATCTGAGGTATATGCAGATTGACTCCAGCCCTAGATGGGAAAAACTCAGCCACTaGGCAGAGTGGAAACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SVHENHLRYMQIDSSPRWEKLSH*AEWKLP Trigger: GGGCAGTTTCCACTCTGCCAAGTGGCTGAGTTTTTC...CCATCTAGGGCTGGAGTCAATCTGCATATACCTCAGATGATTCTCATGAACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | AAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGCCTTGTGCTAATCTGCATTCAGTAGATGTGTaGTGGGGCCAGATTCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: KIIKKDLLNTQTGPCANLHSVDV*WGQIRR Trigger: CCTCCGAATCTGGCCCCACAACACATCTACTGAATG...CAGATTAGCACAAGGCCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | AGTGTTCATGAGAATCATCTGAGGTATATGCAGATTGACTCCAGCCCTAGATGGTCGGAGGACCACGTTTaGAGAAGTTTATCTTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: SVHENHLRYMQIDSSPRWSEDHV*RSLSCA Trigger: GGCACAAGATAAACTTCTCAAAACGTGGTCCTCCGA...CCATCTAGGGCTGGAGTCAATCTGCATATACCTCAGATGATTCTCATGAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | AGTGTTCATGAGAATCATCTGAGGTATATGCAGATTGACTCCAGCCCTAGATGGGAAAACATATCTTGGTaGTATGCCAAGCAGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SVHENHLRYMQIDSSPRWENISW*YAKQPR Trigger: CCTGGGCTGCTTGGCATACAACCAAGATATGTTTTC...CCATCTAGGGCTGGAGTCAATCTGCATATACCTCAGATGATTCTCATGAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | GTTCTATATGAAAACATATCTTGGTTGTATGCCAAGCAGCCCAGGATGGTATGTCGCGCAACAAAACCATaGGCTGAAGAGTCCAACGAT | + |
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Preference number: 5 (lower is better) Translates to: VLYENISWLYAKQPRMVCRATKP*AEESND Trigger: ATCGTTGGACTCTTCAGCCAATGGTTTTGTTGCGCG...ACATACCATCCTGGGCTGCTTGGCATACAACCAAGATATGTTTTCATATAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGTCTTGTGCCGTTTTCTaGAGTCACCTGGACTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGSCAVF*SHLDCC Trigger: GCAGCAGTCCAGGTGACTCAAGAAAACGGCACAAGA...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS TCA 90 bp | GAGTCCAACGATGTGATTGGTGAATTACTGGAAAATCTGATTGGATaGATCACTTCATTTTTGAATCCTCTCTTCTCGGTTAGTCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: ESNDVIGELLENLIG*ITSFLNPLFSVSLR Trigger: TCGCAGACTAACCGAGAAGAGAGGATTCAAAAATGAAGTGATTCATCCAATCAGATTTTCCAGTAATTCACCAATCACATCGTTGGACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | ACCCCAGGTAAAGATTTTTCTAAAGCCTTCCCATGTGACTGTAATGTTACATTGAAGAGCCTTTTTAAGTaGGATAGAATTACTGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: TPGKDFSKAFPCDCNVTLKSLFK*DRITAR Trigger: CCGGGCAGTAATTCTATCCAACTTAAAAAGGCTCTT...CAATGTAACATTACAGTCACATGGGAAGGCTTTAGAAAAATCTTTACCTGGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | TCTTTAGAGACCAGTATATTCTCTCTGAAGGCAAACTACAAGGAAACTGATTCAAACTATTTTAGGGGATaGTTCTGTGCACTTGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: SLETSIFSLKANYKETDSNYFRG*FCALAL Trigger: TAAAGCAAGTGCACAGAACAATCCCCTAAAATAGTT...TGAATCAGTTTCCTTGTAGTTTGCCTTCAGAGAGAATATACTGGTCTCTAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | AAAAGCACGGGAACAAATATAGCAAGCTTACCATTAACTTTAGCCAATCAAATGTATAAAAGCCAGGTGTaGAAAGATAGTCAAGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: KSTGTNIASLPLTLANQMYKSQV*KDSQAS Trigger: GCTTGCTTGACTATCTTTCAACACCTGGCTTTTATA...CATTTGATTGGCTAAAGTTAATGGTAAGCTTGCTATATTTGTTCCCGTGCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS-3UTR CAA 90 bp | GTTGCTAAATTAATAAAGATCATAAAGAAGGATCTGCTGAATACCCAAACAGGGTTTGAGAAGTTTATCTaGTGCCGTTTTCTTGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: VAKLIKIIKKDLLNTQTGFEKFI*CRFLES Trigger: TGACTCAAGAAAACGGCACAAGATAAACTTCTCAAA...CCCTGTTTGGGTATTCAGCAGATCCTTCTTTATGATCTTTATTAATTTAGCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS TCA 72 bp | GTGCAGTCTGCTTGGTGCGGGCCATCTCAGACTACCTaGAAGAAAAACTCAGCCACTTGGCAGAGTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: VQSAWCGPSQTT*KKNSATWQSGN Trigger: GTTTCCACTCTGCCAAGTGGCTGAGTTTTTCTTTCAGGTAGTCTGAGATGGCCCGCACCAAGCAGACTGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS CAA 72 bp | GCCAGATTCGGAGGACCACGTTTTGAGAAGTTTATCTaGTGCCGTTTTCTTGAGTCACCTGGACTGCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: ARFGGPRFEKFI*CRFLESPGLLL Trigger: TAGCAGCAGTCCAGGTGACTCAAGAAAACGGCACAAGATAAACTTCTCAAAACGTGGTCCTCCGAATCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS CAA 90 bp | TCATTCAGTAGATGTGTTGTGGGGCCAGATTCGGAGGACCACGTTTaGAGAAGTTTATCTTGTGCCGTTTTCTTGAGTCACCTGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: SFSRCVVGPDSEDHV*RSLSCAVFLSHLDC Trigger: GCAGTCCAGGTGACTCAAGAAAACGGCACAAGATAAACTTCTCAAAACGTGGTCCTCCGAATCTGGCCCCACAACACATCTACTGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS GCA 72 bp | AGATTCGGAGGACCACGTTTTGAGAAGTTTATCTTGTaGCGTTTTCTTGAGTCACCTGGACTGCTGCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RFGGPRFEKFIL*RFLESPGLLLA Trigger: AGCTAGCAGCAGTCCAGGTGACTCAAGAAAACGGCACAAGATAAACTTCTCAAAACGTGGTCCTCCGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS CAA 72 bp | AGATGTGTTGTGGGGCCAGATTCGGAGGACCACGTTTaGAGAAGTTTATCTTGTGCCGTTTTCTTGAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: RCVVGPDSEDHV*RSLSCAVFLSH Trigger: GTGACTCAAGAAAACGGCACAAGATAAACTTCTCAAAACGTGGTCCTCCGAATCTGGCCCCACAACACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS CAA 90 bp | TTGGTGCGGGCCATCTCAGACTACCTGAAAGAAAAACTCAGCCACTaGGCAGAGTGGAAACTGCCCTTATATATACTCAGAAACATTCTA | + |
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Preference number: 6 (lower is better) Translates to: LVRAISDYLKEKLSH*AEWKLPLYILRNIL Trigger: TAGAATGTTTCTGAGTATATATAAGGGCAGTTTCCACTCTGCCAAGTGGCTGAGTTTTTCTTTCAGGTAGTCTGAGATGGCCCGCACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS CAA 72 bp | GCCATCTCAGACTACCTGAAAGAAAAACTCAGCCACTaGGCAGAGTGGAAACTGCCCTTATATATACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: AISDYLKEKLSH*AEWKLPLYILR Trigger: TCTGAGTATATATAAGGGCAGTTTCCACTCTGCCAAGTGGCTGAGTTTTTCTTTCAGGTAGTCTGAGATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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| CDS TCA 72 bp | GATGTGATTGGTGAATTACTGGAAAATCTGATTGGATaGATCACTTCATTTTTGAATCCTCTCTTCTCGGTT | + |
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Preference number: 6 (lower is better) Translates to: DVIGELLENLIG*ITSFLNPLFSV Trigger: AACCGAGAAGAGAGGATTCAAAAATGAAGTGATTCATCCAATCAGATTTTCCAGTAATTCACCAATCACATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614378.1 |
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