Pregenerated sensors for H3C10 (Homo sapiens)
Ensembl gene IDs: ENSG00000278828Ensembl transcript IDs: ENST00000369163.3
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGCCCTATCTACTACAGGCAAAACAAGTACCAGGAAGAATTCCTaGGAGAAACAGATCTTTTCAGCGCGCATGTGGGTGGCTCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: WALSTTGKTSTRKNS*EKQIFSARMWVALK Trigger: TTTCAGAGCCACCCACATGCGCGCTGAAAAGATCTGTTTCTCTCAGGAATTCTTCCTGGTACTTGTTTTGCCTGTAGTAGATAGGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR CCA 90 bp | GCAGAAGTCAGAGAAAACACTTTCTCTCCCACACGTATTTTTACATaGGGCTTCAAAGGGAATGTTCTCTGGCGGGCTTTCTCCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: AEVRENTFSPTRIFT*GFKGNVLWRAFSRR Trigger: TCTTCTGGAGAAAGCCCGCCAGAGAACATTCCCTTTGAAGCCCCATGTAAAAATACGTGTGGGAGAGAAAGTGTTTTCTCTGACTTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR TCA 90 bp | ACTACCACAGGCTTACCTACAAGGCAGTCTTATTTTGAATACTCCTaGCAGTTCAGAGTTTTAGCCACTGTCAGCAGAAGTCAGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: TTTGLPTRQSYFEYS*QFRVLATVSRSQRK Trigger: TTTTCTCTGACTTCTGCTGACAGTGGCTAAAACTCTGAACTGTCAGGAGTATTCAAAATAAGACTGCCTTGTAGGTAAGCCTGTGGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR TCA 90 bp | TTAGATGTTAAGACTCCCAAAATTAGCATTCAAAAAGGGATAGGCTaGGTCTTACGAAACAGATTGTATAACGTCTGGAAATGGGCCCTA | + |
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Preference number: 1 (lower is better) Translates to: LDVKTPKISIQKGIG*VLRNRLYNVWKWAL Trigger: TAGGGCCCATTTCCAGACGTTATACAATCTGTTTCGTAAGACTCAGCCTATCCCTTTTTGAATGCTAATTTTGGGAGTCTTAACATCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR-3UTR CCA 90 bp | GTTAGCAGAAAATTAGAAGCACCATCCGGTCAAAACCGGGCTGCGGAGATGGGAACACGAAGGAACTTTTaGCTACACTCAATGCTTACG | + |
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Preference number: 2 (lower is better) Translates to: VSRKLEAPSGQNRAAEMGTRRNF*LHSMLT Trigger: CGTAAGCATTGAGTGTAGCCAAAAGTTCCTTCGTGT...TCCCATCTCCGCAGCCCGGTTTTGACCGGATGGTGCTTCTAATTTTCTGCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR CAA 90 bp | CAAAACCGGGCTGCGGAGATGGGAGAGCAATACACGAAGGAACTTTaGGCTACACTCAATGCTTACGGAAAAATGCCGGACATTATTAGA | + |
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Preference number: 2 (lower is better) Translates to: QNRAAEMGEQYTKEL*ATLNAYGKMPDIIR Trigger: TCTAATAATGTCCGGCATTTTTCCGTAAGCATTGAGTGTAGCCAAAAGTTCCTTCGTGTATTGCTCTCCCATCTCCGCAGCCCGGTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR-3UTR CCA 90 bp | CACACGTATTTTTACATGGGGCTTCAAAGGGAATGTTCTCTGGCGGGCTTTCTCTTATTTCTGGCGTGTTaGCAAGAAATATACACACAC | + |
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Preference number: 2 (lower is better) Translates to: HTYFYMGLQRECSLAGFLLFLAC*QEIYTH Trigger: GTGTGTGTATATTTCTTGCCAACACGCCAGAAATAA...GAGAAAGCCCGCCAGAGAACATTCCCTTTGAAGCCCCATGTAAAAATACGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR-3UTR GCA 90 bp | CGTATTTTTACATGGGGCTTCAAAGGGAATGTTCTCTGGCGGGCTTTCTCCAGAATGCTTACGGAAAAATaGCGGACATTATTAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: RIFTWGFKGNVLWRAFSRMLTEK*RTLLDV Trigger: AACATCTAATAATGTCCGGCATTTTTCCGTAAGCAT...TCTGGAGAAAGCCCGCCAGAGAACATTCCCTTTGAAGCCCCATGTAAAAATACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR-3UTR CCA 90 bp | CGAAGGAACTTTTGGCTACACTCAATGCTTACGGAAAAATGCCGGACATTATTATATAACGTCTGGAAATaGGCCCTATCTACTACAGGC | + |
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Preference number: 2 (lower is better) Translates to: RRNFWLHSMLTEKCRTLLYNVWK*ALSTTG Trigger: GCCTGTAGTAGATAGGGCCCATTTCCAGACGTTATA...TAATAATGTCCGGCATTTTTCCGTAAGCATTGAGTGTAGCCAAAAGTTCCTTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTGGCGTGTTGGCAAGAAATATACACACACCACAGTACAGGTTAGCAGAAACCAGGAAGAATTCCTaGGAGAAACAGATCTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: ISGVLARNIHTPQYRLAETRKNS*EKQIFS Trigger: TGAAAAGATCTGTTTCTCTCAGGAATTCTTCCTGGT...TTCTGCTAACCTGTACTGTGGTGTGTGTATATTTCTTGCCAACACGCCAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR GCA 72 bp | CAGAAAATTAGAAGCACCATCCGGTCAAAACCGGGCTaGGGAGATGGGAGAGCAATACACGAAGGAACTTTT | + |
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Preference number: 3 (lower is better) Translates to: QKIRSTIRSKPG*GDGRAIHEGTF Trigger: AAAAGTTCCTTCGTGTATTGCTCTCCCATCTCCGCAGCCCGGTTTTGACCGGATGGTGCTTCTAATTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR CCA 72 bp | CTGCGGAGATGGGAGAGCAATACACGAAGGAACTTTTaGCTACACTCAATGCTTACGGAAAAATGCCGGACA | + |
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Preference number: 3 (lower is better) Translates to: LRRWESNTRRNF*LHSMLTEKCRT Trigger: TGTCCGGCATTTTTCCGTAAGCATTGAGTGTAGCCAAAAGTTCCTTCGTGTATTGCTCTCCCATCTCCGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR TCA 72 bp | TCTACTACAGGCAAAACAAGTACCAGGAAGAATTCCTaGGAGAAACAGATCTTTTCAGCGCGCATGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: STTGKTSTRKNS*EKQIFSARMWV Trigger: CACCCACATGCGCGCTGAAAAGATCTGTTTCTCTCAGGAATTCTTCCTGGTACTTGTTTTGCCTGTAGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR TCA 72 bp | GGCTTACCTACAAGGCAGTCTTATTTTGAATACTCCTaGCAGTTCAGAGTTTTAGCCACTGTCAGCAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: GLPTRQSYFEYS*QFRVLATVSRS Trigger: ACTTCTGCTGACAGTGGCTAAAACTCTGAACTGTCAGGAGTATTCAAAATAAGACTGCCTTGTAGGTAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR-3UTR CAA 90 bp | ATTTCTGGCGTGTTGGCAAGAAATATACACACACCACAGTACAGGTTAGCAGAAGTCTTACGAAACAGATaGTATAACGTCTGGAAATGG | + |
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Preference number: 3 (lower is better) Translates to: ISGVLARNIHTPQYRLAEVLRNR*YNVWKW Trigger: CCATTTCCAGACGTTATACAATCTGTTTCGTAAGAC...TTCTGCTAACCTGTACTGTGGTGTGTGTATATTTCTTGCCAACACGCCAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR GCA 90 bp | GTTAGCAGAAAATTAGAAGCACCATCCGGTCAAAACCGGGCTGCGGAGATGGGACGGTCAAAACCGGGCTaGGGAGATGGGAGAGCAATA | + |
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Preference number: 4 (lower is better) Translates to: VSRKLEAPSGQNRAAEMGRSKPG*GDGRAI Trigger: TATTGCTCTCCCATCTCCGCAGCCCGGTTTTGACCG...TCCCATCTCCGCAGCCCGGTTTTGACCGGATGGTGCTTCTAATTTTCTGCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CCA 90 bp | AGCACCATCCGGTCAAAACCGGGCTGCGGAGATGGGAGAGCAATACACGAAGGAAAAGGGAATGTTCTCTaGCGGGCTTTCTCCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: STIRSKPGCGDGRAIHEGKGNVL*RAFSRR Trigger: TCTTCTGGAGAAAGCCCGCCAGAGAACATTCCCTTT...TCCTTCGTGTATTGCTCTCCCATCTCCGCAGCCCGGTTTTGACCGGATGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CCA 90 bp | AGCACCATCCGGTCAAAACCGGGCTGCGGAGATGGGAGAGCAATACACGAAGGAACACGAAGGAACTTTTaGCTACACTCAATGCTTACG | + |
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Preference number: 4 (lower is better) Translates to: STIRSKPGCGDGRAIHEGTRRNF*LHSMLT Trigger: CGTAAGCATTGAGTGTAGCCAAAAGTTCCTTCGTGT...TCCTTCGTGTATTGCTCTCCCATCTCCGCAGCCCGGTTTTGACCGGATGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| 3UTR CAA 72 bp | GCTGCGGAGATGGGAGAGCAATACACGAAGGAACTTTaGGCTACACTCAATGCTTACGGAAAAATGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: AAEMGEQYTKEL*ATLNAYGKMPD Trigger: GTCCGGCATTTTTCCGTAAGCATTGAGTGTAGCCAAAAGTTCCTTCGTGTATTGCTCTCCCATCTCCGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR TCA 90 bp | GTCAAAACCGGGCTGCGGAGATGGGAGAGCAATACACGAAGGAACTTTTGGCTACAAAAAGGGATAGGCTaGGTCTTACGAAACAGATTG | + |
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Preference number: 4 (lower is better) Translates to: VKTGLRRWESNTRRNFWLQKGIG*VLRNRL Trigger: CAATCTGTTTCGTAAGACTCAGCCTATCCCTTTTTG...TAGCCAAAAGTTCCTTCGTGTATTGCTCTCCCATCTCCGCAGCCCGGTTTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CCA 90 bp | TGGCGTGTTGGCAAGAAATATACACACACCACAGTACAGGTTAGCAGAAAATTAACCGGGCTGCGGAGATaGGAGAGCAATACACGAAGG | + |
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Preference number: 4 (lower is better) Translates to: WRVGKKYTHTTVQVSRKLTGLRR*ESNTRR Trigger: CCTTCGTGTATTGCTCTCCCATCTCCGCAGCCCGGT...TAATTTTCTGCTAACCTGTACTGTGGTGTGTGTATATTTCTTGCCAACACGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CCA 90 bp | CCACACGTATTTTTACATGGGGCTTCAAAGGGAATGTTCTCTGGCGGGCTTTCTTATAACGTCTGGAAATaGGCCCTATCTACTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: PHVFLHGASKGMFSGGLSYNVWK*ALSTTG Trigger: GCCTGTAGTAGATAGGGCCCATTTCCAGACGTTATA...AGAAAGCCCGCCAGAGAACATTCCCTTTGAAGCCCCATGTAAAAATACGTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR TCA 90 bp | GTTAGCAGAAAATTAGAAGCACCATCCGGTCAAAACCGGGCTGCGGAGATGGGATATTTTGAATACTCCTaGCAGTTCAGAGTTTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: VSRKLEAPSGQNRAAEMGYFEYS*QFRVLA Trigger: GGCTAAAACTCTGAACTGTCAGGAGTATTCAAAATA...TCCCATCTCCGCAGCCCGGTTTTGACCGGATGGTGCTTCTAATTTTCTGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR TCA 90 bp | ATTTCTGGCGTGTTGGCAAGAAATATACACACACCACAGTACAGGTTAGCAGAATGGGTATGTAATCAGTaGGTCCTTGAGACTCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ISGVLARNIHTPQYRLAEWVCNQ*VLETQA Trigger: GGCTTGAGTCTCAAGGACTCACTGATTACATACCCA...TTCTGCTAACCTGTACTGTGGTGTGTGTATATTTCTTGCCAACACGCCAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR TCA 90 bp | ACGTATTTTTACATGGGGCTTCAAAGGGAATGTTCTCTGGCGGGCTTTCTCCAGACCAGGAAGAATTCCTaGGAGAAACAGATCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TYFYMGLQRECSLAGFLQTRKNS*EKQIFS Trigger: TGAAAAGATCTGTTTCTCTCAGGAATTCTTCCTGGT...CTGGAGAAAGCCCGCCAGAGAACATTCCCTTTGAAGCCCCATGTAAAAATACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR TCA 90 bp | CCACACGTATTTTTACATGGGGCTTCAAAGGGAATGTTCTCTGGCGGGCTTTCTAAGGCAGTCTTATTTTaGATACTCCTGACAGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: PHVFLHGASKGMFSGGLSKAVLF*ILLTVQ Trigger: CTGAACTGTCAGGAGTATTCAAAATAAGACTGCCTT...AGAAAGCCCGCCAGAGAACATTCCCTTTGAAGCCCCATGTAAAAATACGTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR GCA 90 bp | ATTTCTGGCGTGTTGGCAAGAAATATACACACACCACAGTACAGGTTAGCAGAATTTGGCTACACTCAATaGTTACGGAAAAATGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: ISGVLARNIHTPQYRLAEFGYTQ*LRKNAG Trigger: TCCGGCATTTTTCCGTAAGCATTGAGTGTAGCCAAA...TTCTGCTAACCTGTACTGTGGTGTGTGTATATTTCTTGCCAACACGCCAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CCA 90 bp | AGCAATACACGAAGGAACTTTTGGCTACACTCAATGCTTACGGAAAAATGCCGGTTATTTCTGGCGTGTTaGCAAGAAATATACACACAC | + |
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Preference number: 4 (lower is better) Translates to: SNTRRNFWLHSMLTEKCRLFLAC*QEIYTH Trigger: GTGTGTGTATATTTCTTGCCAACACGCCAGAAATAA...CCGGCATTTTTCCGTAAGCATTGAGTGTAGCCAAAAGTTCCTTCGTGTATTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CCA 90 bp | GAAACAGATTGTATAACGTCTGGAAATGGGCCCTATCTACTACAGGCAAAACAAAGATTGTATAACGTCTaGAAATGGGCCCTATCTACT | + |
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Preference number: 4 (lower is better) Translates to: ETDCITSGNGPYLLQAKQRLYNV*KWALST Trigger: AGTAGATAGGGCCCATTTCCAGACGTTATACAATCT...TTGTTTTGCCTGTAGTAGATAGGGCCCATTTCCAGACGTTATACAATCTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR GCA 90 bp | CGAAGGAACTTTTGGCTACACTCAATGCTTACGGAAAAATGCCGGACATTATTAATGCTTACGGAAAAATaGCGGACATTATTAGATGTT | + |
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Preference number: 4 (lower is better) Translates to: RRNFWLHSMLTEKCRTLLMLTEK*RTLLDV Trigger: AACATCTAATAATGTCCGGCATTTTTCCGTAAGCAT...TAATAATGTCCGGCATTTTTCCGTAAGCATTGAGTGTAGCCAAAAGTTCCTTCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CAA 90 bp | TCTTACGAAACAGATTGTATAACGTCTGGAAATGGGCCCTATCTACTACAGGCAGTAATCAGTGAGTCCTaGAGACTCAAGCCCTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: SYETDCITSGNGPYLLQAVISES*RLKPSR Trigger: GCGAGAGGGCTTGAGTCTCAAGGACTCACTGATTAC...TGCCTGTAGTAGATAGGGCCCATTTCCAGACGTTATACAATCTGTTTCGTAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CAA 90 bp | CCACACGTATTTTTACATGGGGCTTCAAAGGGAATGTTCTCTGGCGGGCTTTCTTTTATTTCTGGCGTGTaGGCAAGAAATATACACACA | + |
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Preference number: 5 (lower is better) Translates to: PHVFLHGASKGMFSGGLSFISGV*ARNIHT Trigger: TGTGTGTATATTTCTTGCCAACACGCCAGAAATAAA...AGAAAGCCCGCCAGAGAACATTCCCTTTGAAGCCCCATGTAAAAATACGTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CAA 90 bp | TGGCGTGTTGGCAAGAAATATACACACACCACAGTACAGGTTAGCAGAAAATTATACACGAAGGAACTTTaGGCTACACTCAATGCTTAC | + |
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Preference number: 5 (lower is better) Translates to: WRVGKKYTHTTVQVSRKLYTKEL*ATLNAY Trigger: GTAAGCATTGAGTGTAGCCAAAAGTTCCTTCGTGTA...TAATTTTCTGCTAACCTGTACTGTGGTGTGTGTATATTTCTTGCCAACACGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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| CDS-3UTR CAA 90 bp | TGGCGTGTTGGCAAGAAATATACACACACCACAGTACAGGTTAGCAGAAAATTACAAGGCAGTCTTATTTaGAATACTCCTGACAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: WRVGKKYTHTTVQVSRKLQGSLI*NTPDSS Trigger: TGAACTGTCAGGAGTATTCAAAATAAGACTGCCTTG...TAATTTTCTGCTAACCTGTACTGTGGTGTGTGTATATTTCTTGCCAACACGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369163.3 |
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