Pregenerated sensors for H3-3B (Homo sapiens)
Ensembl gene IDs: ENSG00000132475Ensembl transcript IDs: ENST00000254810.8, ENST00000586518.1, ENST00000586607.5, ENST00000591893.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACAGGAAGCCGCCTACAACCAAAAGCTATCTTCGCCTTCTGGGTTaGGTGCTCAAGCCAAGTGTGGAAATGCAAGTCACTGCTTCGGCA | + |
|
Preference number: 1 (lower is better) Translates to: YRKPPTTKSYLRLLG*VLKPSVEMQVTASA Trigger: TGCCGAAGCAGTGACTTGCATTTCCACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGCTTTTGGTTGTAGGCGGCTTCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR GCA 90 bp | GGAAGCCGCCTACAACCAAAAGCTATCTTCGCCTTCTGGGTTGAGTaGTCAAGCCAAGTGTGGAAATGCAAGTCACTGCTTCGGCAGATT | + |
|
Preference number: 1 (lower is better) Translates to: GSRLQPKAIFAFWVE*SSQVWKCKSLLRQI Trigger: AATCTGCCGAAGCAGTGACTTGCATTTCCACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGCTTTTGGTTGTAGGCGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CCA 90 bp | TATGCCAGCCTGCAGACTGGAGAAGGTTCACTAGTGTCACCCACTTaGGTTGTCACAGGTAGTAAGCAGAAGCTAACTCATCACCGTAGC | + |
|
Preference number: 1 (lower is better) Translates to: YASLQTGEGSLVSPT*VVTGSKQKLTHHRS Trigger: GCTACGGTGATGAGTTAGCTTCTGCTTACTACCTGTGACAACCCAAGTGGGTGACACTAGTGAACCTTCTCCAGTCTGCAGGCTGGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CCA 90 bp | TCCCATACAGGAAGCCGCCTACAACCAAAAGCTATCTTCGCCTTCTaGGTTGAGTGCTCAAGCCAAGTGTGGAAATGCAAGTCACTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: SHTGSRLQPKAIFAF*VECSSQVWKCKSLL Trigger: AAGCAGTGACTTGCATTTCCACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGCTTTTGGTTGTAGGCGGCTTCCTGTATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR GCA 90 bp | CCTTCTGGGTTGAGTGCTCAAGCCAAGTGTGGAAATGCAAGTCACTaGTTCGGCAGATTGCAAGCTGCCCAATATAATCTAAGAGCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: PSGLSAQAKCGNASH*FGRLQAAQYNLRAF Trigger: GAAGGCTCTTAGATTATATTGGGCAGCTTGCAATCTGCCGAAGCAGTGACTTGCATTTCCACACTTGGCTTGAGCACTCAACCCAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR GCA 90 bp | TTGCTAACTTCAAACGTGGAACGCTTTGATGACTGCTGGCTCTCATaGTGTCTCACTGACATCCACGTACTATGCTTTAGTGGCCATCAT | + |
|
Preference number: 1 (lower is better) Translates to: LLTSNVERFDDCWLS*CLTDIHVLCFSGHH Trigger: ATGATGGCCACTAAAGCATAGTACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTTTGAAGTTAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR TCA 90 bp | CTATGCTTTAGTGGCCATCATCGCACAAGGAAACTGGTTTCATACTaGAGTTTAAGACTGAGTTCTACACCTGTGGGCTTCTACACTACG | + |
|
Preference number: 1 (lower is better) Translates to: LCFSGHHRTRKLVSY*SLRLSSTPVGFYTT Trigger: CGTAGTGTAGAAGCCCACAGGTGTAGAACTCAGTCTTAAACTTCAGTATGAAACCAGTTTCCTTGTGCGATGATGGCCACTAAAGCATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CCA 90 bp | TTTAAGCAGTTGCTAACTTCAAACGTGGAACGCTTTGATGACTGCTaGCTCTCATGCTGTCTCACTGACATCCACGTACTATGCTTTAGT | + |
|
Preference number: 1 (lower is better) Translates to: FKQLLTSNVERFDDC*LSCCLTDIHVLCFS Trigger: ACTAAAGCATAGTACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTTTGAAGTTAGCAACTGCTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CCA 90 bp | TTAATATACTTTGTCTTAGCCCACACTGCAAATACAGCACTATTATaGCATCTTAATCAAGCAGAGAGCTGTTCACATGCTTTCTACAGT | + |
|
Preference number: 1 (lower is better) Translates to: LIYFVLAHTANTALL*HLNQAESCSHAFYS Trigger: ACTGTAGAAAGCATGTGAACAGCTCTCTGCTTGATTAAGATGCCATAATAGTGCTGTATTTGCAGTGTGGGCTAAGACAAAGTATATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CAA 90 bp | ATACAGGAAGCCGCCTACAACCAAAAGCTATCTTCGCCTTCTGGGTaGAGTGCTCAAGCCAAGTGTGGAAATGCAAGTCACTGCTTCGGC | + |
|
Preference number: 2 (lower is better) Translates to: IQEAAYNQKLSSPSG*SAQAKCGNASHCFG Trigger: GCCGAAGCAGTGACTTGCATTTCCACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGCTTTTGGTTGTAGGCGGCTTCCTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CAA 90 bp | AGTGCTCAAGCCAAGTGTGGAAATGCAAGTCACTGCTTCGGCAGATaGCAAGCTGCCCAATATAATCTAAGAGCCTTCTATGCCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SAQAKCGNASHCFGR*QAAQYNLRAFYASL Trigger: CAGGCTGGCATAGAAGGCTCTTAGATTATATTGGGCAGCTTGCAATCTGCCGAAGCAGTGACTTGCATTTCCACACTTGGCTTGAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCCTCTGCTCCTTTACCCTTACCGAGGGATATCCCATACAGGAAGCCGCCTATCTTAATCTCATTCTaGAGCACAGTGAGGAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: FASAPLPLPRDIPYRKPPILISF*STVRNQ Trigger: TTGATTCCTCACTGTGCTTCAGAATGAGATTAAGAT...AGGCGGCTTCCTGTATGGGATATCCCTCGGTAAGGGTAAAGGAGCAGAGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGTAAGCAGAAGCTAACTCATCACCGTAGCCAGGTTTGTGTACTTTGTTTCGACATCCACGTACTATaGTTTAGTGGCCATCATCGC | + |
|
Preference number: 2 (lower is better) Translates to: GSKQKLTHHRSQVCVLCFDIHVL*FSGHHR Trigger: GCGATGATGGCCACTAAAGCATAGTACGTGGATGTC...GAAACAAAGTACACAAACCTGGCTACGGTGATGAGTTAGCTTCTGCTTACTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACAATACAGCACTATTATaGCATCTTAATCAAGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NVERFDDCWLSCCLTDIHNTALL*HLNQAE Trigger: CTCTGCTTGATTAAGATGCCATAATAGTGCTGTATT...GTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR-3UTR TCA 90 bp | AGATTGCAAGCTGCCCAATATAATCTAAGAGCCTTCTATGCCAGCCTGCAGACTCCACCAAACAACACCTaGAATGATCTAAGTTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RLQAAQYNLRAFYASLQTPPNNT*NDLSSK Trigger: TTTTGAACTTAGATCATTTCAGGTGTTGTTTGGTGG...AGTCTGCAGGCTGGCATAGAAGGCTCTTAGATTATATTGGGCAGCTTGCAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CAA 90 bp | GTTCCAGAGCTGATTATGAACTTTCTAGAAAAGCGGGTCATTATATaGCATCCTTTCATAGGAGCTCATTATCACGACCTGAAAGATACC | + |
|
Preference number: 2 (lower is better) Translates to: VPELIMNFLEKRVII*HPFIGAHYHDLKDT Trigger: GGTATCTTTCAGGTCGTGATAATGAGCTCCTATGAAAGGATGCAATATAATGACCCGCTTTTCTAGAAAGTTCATAATCAGCTCTGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCATACTGAAGTTTAAGACTGAGTTCTACACCTGTGGGCTTCTACACTACGGAAGAGAGCTGTTCACATaGTTTCTACAGTATCTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: FILKFKTEFYTCGLLHYGRELFT*FLQYLY Trigger: ATAAAGATACTGTAGAAAGCATGTGAACAGCTCTCT...TCCGTAGTGTAGAAGCCCACAGGTGTAGAACTCAGTCTTAAACTTCAGTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCCTCTGCTCCTTTACCCTTACCGAGGGATATCCCATACAGGAAGCCGCCTCCAGGTTTGTGTACTTaGTTTCCAGACACGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: FASAPLPLPRDIPYRKPPPGLCT*FPDTLQ Trigger: CTGTAGCGTGTCTGGAAACAAAGTACACAAACCTGG...AGGCGGCTTCCTGTATGGGATATCCCTCGGTAAGGGTAAAGGAGCAGAGGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CCA 72 bp | GGAAGCCGCCTACAACCAAAAGCTATCTTCGCCTTCTaGGTTGAGTGCTCAAGCCAAGTGTGGAAATGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSRLQPKAIFAF*VECSSQVWKCK Trigger: CTTGCATTTCCACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGCTTTTGGTTGTAGGCGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR TCA 72 bp | CCGCCTACAACCAAAAGCTATCTTCGCCTTCTGGGTTaGGTGCTCAAGCCAAGTGTGGAAATGCAAGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PPTTKSYLRLLG*VLKPSVEMQVT Trigger: AGTGACTTGCATTTCCACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGCTTTTGGTTGTAGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR GCA 72 bp | TGGCTCTCATGCTGTCTCACTGACATCCACGTACTATaGTTTAGTGGCCATCATCGCACAAGGAAACTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WLSCCLTDIHVL*FSGHHRTRKLV Trigger: AACCAGTTTCCTTGTGCGATGATGGCCACTAAAGCATAGTACGTGGATGTCAGTGAGACAGCATGAGAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CCA 72 bp | CTGCAGACTGGAGAAGGTTCACTAGTGTCACCCACTTaGGTTGTCACAGGTAGTAAGCAGAAGCTAACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQTGEGSLVSPT*VVTGSKQKLTH Trigger: ATGAGTTAGCTTCTGCTTACTACCTGTGACAACCCAAGTGGGTGACACTAGTGAACCTTCTCCAGTCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR GCA 72 bp | TCAAACGTGGAACGCTTTGATGACTGCTGGCTCTCATaGTGTCTCACTGACATCCACGTACTATGCTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SNVERFDDCWLS*CLTDIHVLCFS Trigger: ACTAAAGCATAGTACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR GCA 72 bp | CTACAACCAAAAGCTATCTTCGCCTTCTGGGTTGAGTaGTCAAGCCAAGTGTGGAAATGCAAGTCACTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LQPKAIFAFWVE*SSQVWKCKSLL Trigger: AAGCAGTGACTTGCATTTCCACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGCTTTTGGTTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CCA 72 bp | TTGCTAACTTCAAACGTGGAACGCTTTGATGACTGCTaGCTCTCATGCTGTCTCACTGACATCCACGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: LLTSNVERFDDC*LSCCLTDIHVL Trigger: TAGTACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTTTGAAGTTAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR TCA 72 bp | AGTGGCCATCATCGCACAAGGAAACTGGTTTCATACTaGAGTTTAAGACTGAGTTCTACACCTGTGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGHHRTRKLVSY*SLRLSSTPVGF Trigger: GAAGCCCACAGGTGTAGAACTCAGTCTTAAACTTCAGTATGAAACCAGTTTCCTTGTGCGATGATGGCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR GCA 72 bp | TTGAGTGCTCAAGCCAAGTGTGGAAATGCAAGTCACTaGTTCGGCAGATTGCAAGCTGCCCAATATAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LSAQAKCGNASH*FGRLQAAQYNL Trigger: TAGATTATATTGGGCAGCTTGCAATCTGCCGAAGCAGTGACTTGCATTTCCACACTTGGCTTGAGCACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR TCA 72 bp | CATAGCACGTTCCAACATCTGATCTTAATCTCATTCTaGAGCACAGTGAGGAATCAAGTGTGCTTGTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSTFQHLILISF*STVRNQVCLFQ Trigger: CTGGAACAAGCACACTTGATTCCTCACTGTGCTTCAGAATGAGATTAAGATCAGATGTTGGAACGTGCTATG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CCA 72 bp | TTTGTCTTAGCCCACACTGCAAATACAGCACTATTATaGCATCTTAATCAAGCAGAGAGCTGTTCACATGCT | + |
|
Preference number: 3 (lower is better) Translates to: FVLAHTANTALL*HLNQAESCSHA Trigger: AGCATGTGAACAGCTCTCTGCTTGATTAAGATGCCATAATAGTGCTGTATTTGCAGTGTGGGCTAAGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | AACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGTACTATGCTTCGCTAGCCTCCTaGAGCGCACCGATGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NALMTAGSHAVSLTSTYYASLAS*SAPMAA Trigger: CGCAGCCATCGGTGCGCTGCAGGAGGCTAGCGAAGC...ATAGTACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | ACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGCCTTCTATGCCAGCCTaGAGACTGGAGAAGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TWNALMTAGSHAVSLTSTPSMPA*RLEKVH Trigger: GTGAACCTTCTCCAGTCTGCAGGCTGGCATAGAAGG...CGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGCCTACAACCAAAAGCTATCTTCGCCTTCTGGGTTGAGTGCTCAAGCCAATGCCAGCCTGCAGACTaGAGAAGGTTCACTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRLQPKAIFAFWVECSSQCQPAD*RRFTSV Trigger: GACACTAGTGAACCTTCTCCAGTCTGCAGGCTGGCA...TTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGCTTTTGGTTGTAGGCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR TCA 90 bp | ACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGCTCATGCTGTCTCACTaGCATCCACGTACTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWNALMTAGSHAVSLTSTLMLSH*HPRTML Trigger: AAGCATAGTACGTGGATGTCAGTGAGACAGCATGAG...CGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR TCA 90 bp | AACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGTACTATCTTCGCCTTCTGGGTTaGGTGCTCAAGCCAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NALMTAGSHAVSLTSTYYLRLLG*VLKPSV Trigger: CACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAG...ATAGTACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | ACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGGACATCCACGTACTATaGTTTAGTGGCCATCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: TWNALMTAGSHAVSLTSTDIHVL*FSGHHR Trigger: GCGATGATGGCCACTAAAGCATAGTACGTGGATGTC...CGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGTAGCTATCTTCGCCTTCTaGGTTGAGTGCTCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VERFDDCWLSCCLTDIHVAIFAF*VECSSQ Trigger: TTGGCTTGAGCACTCAACCCAGAAGGCGAAGATAGC...TACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | AACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGTACTATGACTGCTGGCTCTCATaGTGTCTCACTGACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NALMTAGSHAVSLTSTYYDCWLS*CLTDIH Trigger: GTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTC...ATAGTACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | AACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACTTTCTCCTTTGCCTCTaGTCCTTTACCCTTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVERFDDCWLSCCLTDIHFLLCL*SFTLTE Trigger: CTCGGTAAGGGTAAAGGAGCAGAGGCAAAGGAGAAA...GTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTGCTAACTTCAAACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTTCTAAGAGCCTTCTATaGCAGCCTGCAGACTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLTSNVERFDDCWLSCCSKSLL*QPADWR Trigger: TCTCCAGTCTGCAGGCTGGCATAGAAGGCTCTTAGA...ACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTTTGAAGTTAGCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGTAACTGCTTCGGCAGATTaGAAGCTGCCCAATATAATC | + |
|
Preference number: 4 (lower is better) Translates to: VERFDDCWLSCCLTDIHVTASAD*KLPNII Trigger: GATTATATTGGGCAGCTTGCAATCTGCCGAAGCAGT...TACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTGCTAACTTCAAACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTGGAAATGCAAGTCACTaGTTCGGCAGATTGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLTSNVERFDDCWLSCCGNASH*FGRLQA Trigger: AGCTTGCAATCTGCCGAAGCAGTGACTTGCATTTCC...ACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTTTGAAGTTAGCAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGTAAGCAGAAGCTAACTCATCACCGTAGCCAGGTTTGTGTACTTTGTTTCGCCTTCTGGGTTGAGTaGTCAAGCCAAGTGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSKQKLTHHRSQVCVLCFAFWVE*SSQVWK Trigger: TTTCCACACTTGGCTTGAGCACTCAACCCAGAAGGC...GAAACAAAGTACACAAACCTGGCTACGGTGATGAGTTAGCTTCTGCTTACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGTAATCTTAATCTCATTCTaGAGCACAGTGAGGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VERFDDCWLSCCLTDIHVILISF*STVRNQ Trigger: TTGATTCCTCACTGTGCTTCAGAATGAGATTAAGAT...TACGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGCAAGCTGCCCAATATAATCTAAGAGCCTTCTATGCCAGCCTGCAGACTGATACCTGCATCAGCTaGAACTTCTGCTTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLQAAQYNLRAFYASLQTDTCIS*NFCFSP Trigger: AGGAGAAAAGCAGAAGTTGCAGCTGATGCAGGTATC...AGTCTGCAGGCTGGCATAGAAGGCTCTTAGATTATATTGGGCAGCTTGCAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CAA 72 bp | GCCAAGTGTGGAAATGCAAGTCACTGCTTCGGCAGATaGCAAGCTGCCCAATATAATCTAAGAGCCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AKCGNASHCFGR*QAAQYNLRAFY Trigger: ATAGAAGGCTCTTAGATTATATTGGGCAGCTTGCAATCTGCCGAAGCAGTGACTTGCATTTCCACACTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGCTAACTTCAAACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCATTATCACGACCTaGAAGATACCTACTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLTSNVERFDDCWLSCCLIITT*KIPTLP Trigger: AGGTAAAGTAGGTATCTTTCAGGTCGTGATAATGAG...ACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTTTGAAGTTAGCAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACTATTATGGCATCTTAATCAAGCAGAGAGCTGTTCACATGCTTTCTACACTAGTGTCACCCACTTaGGTTGTCACAGGTAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHYYGILIKQRAVHMLSTLVSPT*VVTGSK Trigger: CTTACTACCTGTGACAACCCAAGTGGGTGACACTAG...TGTAGAAAGCATGTGAACAGCTCTCTGCTTGATTAAGATGCCATAATAGTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGCAAGCTGCCCAATATAATCTAAGAGCCTTCTATGCCAGCCTGCAGACTAGAGAGCTGTTCACATaGTTTCTACAGTATCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLQAAQYNLRAFYASLQTRELFT*FLQYLY Trigger: ATAAAGATACTGTAGAAAGCATGTGAACAGCTCTCT...AGTCTGCAGGCTGGCATAGAAGGCTCTTAGATTATATTGGGCAGCTTGCAATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR TCA 90 bp | TTCATACTGAAGTTTAAGACTGAGTTCTACACCTGTGGGCTTCTACACTACGGACCACCAAACAACACCTaGAATGATCTAAGTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FILKFKTEFYTCGLLHYGPPNNT*NDLSSK Trigger: TTTTGAACTTAGATCATTTCAGGTGTTGTTTGGTGG...TCCGTAGTGTAGAAGCCCACAGGTGTAGAACTCAGTCTTAAACTTCAGTATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR CCA 90 bp | TTCATACTGAAGTTTAAGACTGAGTTCTACACCTGTGGGCTTCTACACTACGGAAATACAGCACTATTATaGCATCTTAATCAAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FILKFKTEFYTCGLLHYGNTALL*HLNQAE Trigger: CTCTGCTTGATTAAGATGCCATAATAGTGCTGTATT...TCCGTAGTGTAGAAGCCCACAGGTGTAGAACTCAGTCTTAAACTTCAGTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| 3UTR CAA 72 bp | CTGATTATGAACTTTCTAGAAAAGCGGGTCATTATATaGCATCCTTTCATAGGAGCTCATTATCACGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIMNFLEKRVII*HPFIGAHYHDL Trigger: CAGGTCGTGATAATGAGCTCCTATGAAAGGATGCAATATAATGACCCGCTTTTCTAGAAAGTTCATAATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS GCA 90 bp | CGGCCCGGCCCAGACCGGTTCCAACCTGCTGGGGCCGGTCCCAACTaGCTCCAACTGCCACCAACCTCTGGTCGGGCTGTGGGGCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPGPDRFQPAGAGPN*LQLPPTSGRAVGRE Trigger: TTCCCGCCCCACAGCCCGACCAGAGGTTGGTGGCAGTTGGAGGCAGTTGGGACCGGCCCCAGCAGGTTGGAACCGGTCTGGGCCGGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 90 bp | CTCTGGTCGGGCTGTGGGGCGGGAAACTCGGTCCCGGCCGCCGAGTaGGGAAGGCGGGAGCTCGGGATGCAGAGTGCACTCTCCCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWSGCGAGNSVPAAE*GRRELGMQSALSLG Trigger: GCCTAGGGAGAGTGCACTCTGCATCCCGAGCTCCCGCCTTCCCCACTCGGCGGCCGGGACCGAGTTTCCCGCCCCACAGCCCGACCAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 90 bp | CCGGTCCCAACTGCCTCCAACTGCCACCAACCTCTGGTCGGGCTGTaGGGCGGGAAACTCGGTCCCGGCCGCCGAGTGGGGAAGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVPTASNCHQPLVGL*GGKLGPGRRVGKAG Trigger: TCCCGCCTTCCCCACTCGGCGGCCGGGACCGAGTTTCCCGCCCCACAGCCCGACCAGAGGTTGGTGGCAGTTGGAGGCAGTTGGGACCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 90 bp | ACCTGCTGGGGCCGGTCCCAACTGCCTCCAACTGCCACCAACCTCTaGTCGGGCTGTGGGGCGGGAAACTCGGTCCCGGCCGCCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TCWGRSQLPPTATNL*SGCGAGNSVPAAEW Trigger: CCACTCGGCGGCCGGGACCGAGTTTCCCGCCCCACAGCCCGACCAGAGGTTGGTGGCAGTTGGAGGCAGTTGGGACCGGCCCCAGCAGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 90 bp | CGCGGGGAGGAGTCACTTCCCTTCCTCGACGGGCGGAGGCCCGACTaGCCGGAACCCGGCGTCGGGACCTCTGAATCACCGCCGGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RGEESLPFLDGRRPD*PEPGVGTSESPPGK Trigger: TTTTCCCGGCGGTGATTCAGAGGTCCCGACGCCGGGTTCCGGGCAGTCGGGCCTCCGCCCGTCGAGGAAGGGAAGTGACTCCTCCCCGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586518.1 |
||
| CDS TCA 90 bp | CGACGGGCGGAGGCCCGACTGCCCGGAACCCGGCGTCGGGACCTCTaGATCACCGCCGGGAAAAGGCGGGGACACAGTTCCGGAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRAEARLPGTRRRDL*ITAGKRRGHSSGTK Trigger: CTTTGTTCCGGAACTGTGTCCCCGCCTTTTCCCGGCGGTGATTCAGAGGTCCCGACGCCGGGTTCCGGGCAGTCGGGCCTCCGCCCGTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586518.1 |
||
| CDS GCA 90 bp | GGTCCCGGCCGCCGAGTGGGGAAGGCGGGAGCTCGGGATGCAGAGTaGACTCTCCCTAGGCCAGGCCTTCGAGGCCTAACTGTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGRRVGKAGARDAE*TLPRPGLRGLTVPQ Trigger: CTGAGGAACAGTTAGGCCTCGAAGGCCTGGCCTAGGGAGAGTGCACTCTGCATCCCGAGCTCCCGCCTTCCCCACTCGGCGGCCGGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 90 bp | CAGACCGGTTCCAACCTGCTGGGGCCGGTCCCAACTGCCTCCAACTaGCACCAACCTCTGGTCGGGCTGTGGGGCGGGAAACTCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QTGSNLLGPVPTASN*HQPLVGLWGGKLGP Trigger: GGGACCGAGTTTCCCGCCCCACAGCCCGACCAGAGGTTGGTGGCAGTTGGAGGCAGTTGGGACCGGCCCCAGCAGGTTGGAACCGGTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 90 bp | CCGTCGCAGGCCCTCAGCATCCGGGACACTAGCAGCAAGGATCCCTaGGTATTGTGGTCCTGTGCTTTGCCAGCAACCCTCTGCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: PSQALSIRDTSSKDP*VLWSCALPATLCRR Trigger: CCGTCGGCAGAGGGTTGCTGGCAAAGCACAGGACCACAATACCCAGGGATCCTTGCTGCTAGTGTCCCGGATGCTGAGGGCCTGCGACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 90 bp | AGCAAAGCTTTCTCAATGCCTCTTAGGTTAGACCCGCCGCAGGGATaGAGGGGTTGCTGGCGGATTGCAGGTGCCTGCAGCACAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKAFSMPLRLDPPQG*RGCWRIAGACSTGP Trigger: GGGCCCTGTGCTGCAGGCACCTGCAATCCGCCAGCAACCCCTTCATCCCTGCGGCGGGTCTAACCTAAGAGGCATTGAGAAAGCTTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 90 bp | TTCACAGTCGACGTAGATAAACATGCAAAGATGGAAACGTGTCCGTaGGTGCCCATGACCGTTTCCCTCGCGGGCTGTGCGGAGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FTVDVDKHAKMETCP*VPMTVSLAGCAEPE Trigger: CTCAGGCTCCGCACAGCCCGCGAGGGAAACGGTCATGGGCACGCACGGACACGTTTCCATCTTTGCATGTTTATCTACGTCGACTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 90 bp | GGGACACTAGCAGCAAGGATCCCTGGGTATTGTGGTCCTGTGCTTTaGCAGCAACCCTCTGCCGACGGTAAAATTCCAGCCGGACATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTLAARIPGYCGPVL*QQPSADGKIPAGHR Trigger: TCTATGTCCGGCTGGAATTTTACCGTCGGCAGAGGGTTGCTGGCAAAGCACAGGACCACAATACCCAGGGATCCTTGCTGCTAGTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 90 bp | TACGGGCACGCCCTACTCAAACCCAGGCCTTTCCTCTGGACCCTGTaGTGCTTCTCAACACTGGCAACTTGTCAGTGTACCTCAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: YGHALLKPRPFLWTL*CFSTLATCQCTSET Trigger: AGTCTCTGAGGTACACTGACAAGTTGCCAGTGTTGAGAAGCATCACAGGGTCCAGAGGAAAGGCCTGGGTTTGAGTAGGGCGTGCCCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 90 bp | CTGCAGGCTCAGCAGAAATGTAGCATTAGAGGGAGCCCCAAATACTaGCACTACAGGAGTCCAGCAGGATGGGAAAACCTCTTCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQAQQKCSIRGSPKY*HYRSPAGWENLFLE Trigger: TTCCAGGAAGAGGTTTTCCCATCCTGCTGGACTCCTGTAGTGTCAGTATTTGGGGCTCCCTCTAATGCTACATTTCTGCTGAGCCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS-3UTR CAA 90 bp | AACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACTGTCACCCACTTGGGTaGTCACAGGTAGTAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NVERFDDCWLSCCLTDIHCHPLG*SQVVSR Trigger: TCTGCTTACTACCTGTGACAACCCAAGTGGGTGACA...GTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS GCA 90 bp | ACTACAGGAGTCCAGCAGGATGGGAAAACCTCTTCCTGGAAGTCTTaGATCTGTGTGCTTTTAGGTCGCTGTCTTCATTTCCTTCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTGVQQDGKTSSWKS*ICVLLGRCLHFLQA Trigger: GGCTTGAAGGAAATGAAGACAGCGACCTAAAAGCACACAGATGCAAGACTTCCAGGAAGAGGTTTTCCCATCCTGCTGGACTCCTGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS-3UTR CAA 90 bp | ACGTGGAACGCTTTGATGACTGCTGGCTCTCATGCTGTCTCACTGACATCCACGAAGCGGGTCATTATATaGCATCCTTTCATAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TWNALMTAGSHAVSLTSTKRVII*HPFIGA Trigger: AGCTCCTATGAAAGGATGCAATATAATGACCCGCTT...CGTGGATGTCAGTGAGACAGCATGAGAGCCAGCAGTCATCAAAGCGTTCCACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR CAA 90 bp | AGATTGCAAGCTGCCCAATATAATCTAAGAGCCTTCTATGCCAGCCTGCAGACTCAAACGTGGAACGCTTaGATGACTGCTGGCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLQAAQYNLRAFYASLQTQTWNA*MTAGSH Trigger: ATGAGAGCCAGCAGTCATCAAAGCGTTCCACGTTTG...AGTCTGCAGGCTGGCATAGAAGGCTCTTAGATTATATTGGGCAGCTTGCAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS CCA 90 bp | AATACTGACACTACAGGAGTCCAGCAGGATGGGAAAACCTCTTCCTaGAAGTCTTGCATCTGTGTGCTTTTAGGTCGCTGTCTTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NTDTTGVQQDGKTSS*KSCICVLLGRCLHF Trigger: GAAATGAAGACAGCGACCTAAAAGCACACAGATGCAAGACTTCCAGGAAGAGGTTTTCCCATCCTGCTGGACTCCTGTAGTGTCAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS-3UTR CAA 90 bp | TTCATACTGAAGTTTAAGACTGAGTTCTACACCTGTGGGCTTCTACACTACGGATCTTCGCCTTCTGGGTaGAGTGCTCAAGCCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FILKFKTEFYTCGLLHYGSSPSG*SAQAKC Trigger: ACACTTGGCTTGAGCACTCAACCCAGAAGGCGAAGA...TCCGTAGTGTAGAAGCCCACAGGTGTAGAACTCAGTCTTAAACTTCAGTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGCATCTTAATCAAGCAGAGAGCTGTTCACATGCTTTCTACAGTATCTTTCACTGCTTCGGCAGATaGCAAGCTGCCCAATATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LWHLNQAESCSHAFYSIFHCFGR*QAAQYN Trigger: ATTATATTGGGCAGCTTGCAATCTGCCGAAGCAGTG...AAAGATACTGTAGAAAGCATGTGAACAGCTCTCTGCTTGATTAAGATGCCATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000254810.8 |
||
| CDS GCA 72 bp | CTTCCTCCTCCGGCCCGGCCCAGACCGGTTCCAACCTaGTGGGGCCGGTCCCAACTGCCTCCAACTGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LPPPARPRPVPT*WGRSQLPPTAT Trigger: GGTGGCAGTTGGAGGCAGTTGGGACCGGCCCCAGCAGGTTGGAACCGGTCTGGGCCGGGCCGGAGGAGGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 72 bp | CGGCTCCCAACGGCCGCGGCGCGCGGCGCCAACGGTTaGCAGAACCTGAAGCCGCGGGTAAACCTACGAACG | + |
|
Preference number: 6 (lower is better) Translates to: RLPTAAARGANG*QNLKPRVNLRT Trigger: CGTTCGTAGGTTTACCCGCGGCTTCAGGTTCTGCCAACCGTTGGCGCCGCGCGCCGCGGCCGTTGGGAGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586518.1 |
||
| CDS CCA 72 bp | ACTGCCTCCAACTGCCACCAACCTCTGGTCGGGCTGTaGGGCGGGAAACTCGGTCCCGGCCGCCGAGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TASNCHQPLVGL*GGKLGPGRRVG Trigger: CCCCACTCGGCGGCCGGGACCGAGTTTCCCGCCCCACAGCCCGACCAGAGGTTGGTGGCAGTTGGAGGCAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 72 bp | GGCCGGTCCCAACTGCCTCCAACTGCCACCAACCTCTaGTCGGGCTGTGGGGCGGGAAACTCGGTCCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GRSQLPPTATNL*SGCGAGNSVPA Trigger: GGCCGGGACCGAGTTTCCCGCCCCACAGCCCGACCAGAGGTTGGTGGCAGTTGGAGGCAGTTGGGACCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 72 bp | CCTCCTCCGGCCCGGCCCAGACCGGTTCCAACCTGCTaGGGCCGGTCCCAACTGCCTCCAACTGCCACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PPPARPRPVPTC*GRSQLPPTATN Trigger: GTTGGTGGCAGTTGGAGGCAGTTGGGACCGGCCCCAGCAGGTTGGAACCGGTCTGGGCCGGGCCGGAGGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 72 bp | GAGGCCCGACTGCCCGGAACCCGGCGTCGGGACCTCTaGATCACCGCCGGGAAAAGGCGGGGACACAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EARLPGTRRRDL*ITAGKRRGHSS Trigger: GGAACTGTGTCCCCGCCTTTTCCCGGCGGTGATTCAGAGGTCCCGACGCCGGGTTCCGGGCAGTCGGGCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586518.1 |
||
| CDS GCA 72 bp | GAGTCACTTCCCTTCCTCGACGGGCGGAGGCCCGACTaGCCGGAACCCGGCGTCGGGACCTCTGAATCACCG | + |
|
Preference number: 6 (lower is better) Translates to: ESLPFLDGRRPD*PEPGVGTSESP Trigger: CGGTGATTCAGAGGTCCCGACGCCGGGTTCCGGGCAGTCGGGCCTCCGCCCGTCGAGGAAGGGAAGTGACTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586518.1 |
||
| CDS CAA 72 bp | TCGGCTCCCAACGGCCGCGGCGCGCGGCGCCAACGGTaGGCAGAACCTGAAGCCGCGGGTAAACCTACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SAPNGRGARRQR*AEPEAAGKPTN Trigger: GTTCGTAGGTTTACCCGCGGCTTCAGGTTCTGCCAACCGTTGGCGCCGCGCGCCGCGGCCGTTGGGAGCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586518.1 |
||
| CDS GCA 72 bp | TCCAACCTGCTGGGGCCGGTCCCAACTGCCTCCAACTaGCACCAACCTCTGGTCGGGCTGTGGGGCGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SNLLGPVPTASN*HQPLVGLWGGK Trigger: TTTCCCGCCCCACAGCCCGACCAGAGGTTGGTGGCAGTTGGAGGCAGTTGGGACCGGCCCCAGCAGGTTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 72 bp | CCAGACCGGTTCCAACCTGCTGGGGCCGGTCCCAACTaGCTCCAACTGCCACCAACCTCTGGTCGGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PDRFQPAGAGPN*LQLPPTSGRAV Trigger: CACAGCCCGACCAGAGGTTGGTGGCAGTTGGAGGCAGTTGGGACCGGCCCCAGCAGGTTGGAACCGGTCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 72 bp | CAGGCGCACTGGGTCCTCGGCGCGGACCGCGCAGACTaGATAATAAAAGGGGAGCGGCGAAGAGGCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QAHWVLGADRAD*IIKGERRRGRK Trigger: CTTCCTGCCTCTTCGCCGCTCCCCTTTTATTATTCAGTCTGCGCGGTCCGCGCCGAGGACCCAGTGCGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 72 bp | CGGGCTGTGCGGAGCCTGAGTCTGGGAGCCCGAAGGTaGTGGGTTCCAAGTATGTCTGCAGGCTCAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RAVRSLSLGARR*WVPSMSAGSAE Trigger: TTCTGCTGAGCCTGCAGACATACTTGGAACCCATCACCTTCGGGCTCCCAGACTCAGGCTCCGCACAGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 72 bp | AACATGCAAAGATGGAAACGTGTCCGTGCGTGCCCATaGCCGTTTCCCTCGCGGGCTGTGCGGAGCCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: NMQRWKRVRACP*PFPSRAVRSLS Trigger: ACTCAGGCTCCGCACAGCCCGCGAGGGAAACGGTCATGGGCACGCACGGACACGTTTCCATCTTTGCATGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 72 bp | TTCTCAATGCCTCTTAGGTTAGACCCGCCGCAGGGATaGAGGGGTTGCTGGCGGATTGCAGGTGCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSMPLRLDPPQG*RGCWRIAGACS Trigger: GCTGCAGGCACCTGCAATCCGCCAGCAACCCCTTCATCCCTGCGGCGGGTCTAACCTAAGAGGCATTGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 72 bp | GCCCTCAGCATCCGGGACACTAGCAGCAAGGATCCCTaGGTATTGTGGTCCTGTGCTTTGCCAGCAACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALSIRDTSSKDP*VLWSCALPATL Trigger: GAGGGTTGCTGGCAAAGCACAGGACCACAATACCCAGGGATCCTTGCTGCTAGTGTCCCGGATGCTGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 72 bp | GCAGCAAGGATCCCTGGGTATTGTGGTCCTGTGCTTTaGCAGCAACCCTCTGCCGACGGTAAAATTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AARIPGYCGPVL*QQPSADGKIPA Trigger: GGCTGGAATTTTACCGTCGGCAGAGGGTTGCTGGCAAAGCACAGGACCACAATACCCAGGGATCCTTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 72 bp | TCTGGGAGCCCGAAGGTGATGGGTTCCAAGTATGTCTaGAGGCTCAGCAGAAATGTAGCATTAGAGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSPKVMGSKYV*RLSRNVALEGA Trigger: GGCTCCCTCTAATGCTACATTTCTGCTGAGCCTGCAGACATACTTGGAACCCATCACCTTCGGGCTCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 72 bp | GAAAGCACACAAGTCGTGGAGTTCCAGGTGTCGAGTTaGGCAAAGGTAAATGAAGCGCCTCGGCAAAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ESTQVVEFQVSS*AKVNEAPRQRR Trigger: GCGCCTTTGCCGAGGCGCTTCATTTACCTTTGCCAAACTCGACACCTGGAACTCCACGACTTGTGTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 72 bp | AGGAGTTCCGTGGGGTCCAGCCCCAGAACCCACCTATaGATGATGATTAACGTGAAGTCCTGTCAGGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: RSSVGSSPRTHL*MMINVKSCQEI Trigger: AATCTCCTGACAGGACTTCACGTTAATCATCATTCATAGGTGGGTTCTGGGGCTGGACCCCACGGAACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 72 bp | CCGACAACACAGATTCTTAAGCCCTGCTTGGAGCACTaGTCTGAGCTGGCATTAGAACCGAACCTAGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PTTQILKPCLEH*SELALEPNLAV Trigger: TACAGCTAGGTTCGGTTCTAATGCCAGCTCAGAGCAGTGCTCCAAGCAGGGCTTAAGAATCTGTGTTGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 72 bp | CCTCTGGACCCTGTGATGCTTCTCAACACTGGCAACTaGTCAGTGTACCTCAGAGACTATTCTAGGCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLDPVMLLNTGN*SVYLRDYSRRR Trigger: TCTCCGCCTAGAATAGTCTCTGAGGTACACTGACAAGTTGCCAGTGTTGAGAAGCATCACAGGGTCCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 72 bp | CAGCAGAAATGTAGCATTAGAGGGAGCCCCAAATACTaGCACTACAGGAGTCCAGCAGGATGGGAAAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: QQKCSIRGSPKY*HYRSPAGWENL Trigger: GAGGTTTTCCCATCCTGCTGGACTCCTGTAGTGTCAGTATTTGGGGCTCCCTCTAATGCTACATTTCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CCA 72 bp | ACTACAGGAGTCCAGCAGGATGGGAAAACCTCTTCCTaGAAGTCTTGCATCTGTGTGCTTTTAGGTCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TTGVQQDGKTSS*KSCICVLLGRC Trigger: ACAGCGACCTAAAAGCACACAGATGCAAGACTTCCAGGAAGAGGTTTTCCCATCCTGCTGGACTCCTGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 72 bp | ATTAACGTGAAGTCCTGTCAGGAGATTCCGTGCAGTTaGCGCAGGAAGCCTTTTGTGTCCCTAAGGCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: INVKSCQEIPCS*RRKPFVSLRLV Trigger: TACGAGCCTTAGGGACACAAAAGGCTTCCTGCGCAAACTGCACGGAATCTCCTGACAGGACTTCACGTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586607.5 ENST00000591893.1 |
||
| CDS CAA 90 bp | CACTACAGGAGTCCAGCAGGATGGGAAAACCTCTTCCTGGAAGTCTaGCATCTGTGTGCTTTTAGGTCGCTGTCTTCATTTCCTTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HYRSPAGWENLFLEV*HLCAFRSLSSFPSS Trigger: GCTTGAAGGAAATGAAGACAGCGACCTAAAAGCACACAGATGCAAGACTTCCAGGAAGAGGTTTTCCCATCCTGCTGGACTCCTGTAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 90 bp | CAGGCCTTTCCTCTGGACCCTGTGATGCTTCTCAACACTGGCAACTaGTCAGTGTACCTCAGAGACTATTCTAGGCGGAGATTAAATTCG | + |
|
Preference number: 6 (lower is better) Translates to: QAFPLDPVMLLNTGN*SVYLRDYSRRRLNS Trigger: CGAATTTAATCTCCGCCTAGAATAGTCTCTGAGGTACACTGACAAGTTGCCAGTGTTGAGAAGCATCACAGGGTCCAGAGGAAAGGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS GCA 72 bp | ATGATGATTAACGTGAAGTCCTGTCAGGAGATTCCGTaGAGTTTGCGCAGGAAGCCTTTTGTGTCCCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: MMINVKSCQEIP*SLRRKPFVSLR Trigger: CCTTAGGGACACAAAAGGCTTCCTGCGCAAACTGCACGGAATCTCCTGACAGGACTTCACGTTAATCATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586607.5 ENST00000591893.1 |
||
| CDS GCA 72 bp | GTCCAGCAGGATGGGAAAACCTCTTCCTGGAAGTCTTaGATCTGTGTGCTTTTAGGTCGCTGTCTTCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: VQQDGKTSSWKS*ICVLLGRCLHF Trigger: GAAATGAAGACAGCGACCTAAAAGCACACAGATGCAAGACTTCCAGGAAGAGGTTTTCCCATCCTGCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 90 bp | CCTTTTGTGTCCCTAAGGCTCGTAGGTTGTCCACGAGGGCCACACTaGCTTGAATTCACAGTCGACGTAGATAAACATGCAAAGATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PFVSLRLVGCPRGPH*LEFTVDVDKHAKME Trigger: TTCCATCTTTGCATGTTTATCTACGTCGACTGTGAATTCAAGCAAGTGTGGCCCTCGTGGACAACCTACGAGCCTTAGGGACACAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 90 bp | TCAGTGTACCTCAGAGACTATTCTAGGCGGAGATTAAATTCGTCCTaGGCCCTTAATGTACTGGAAACAAGTTGGTCAGGCCAGGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SVYLRDYSRRRLNSS*ALNVLETSWSGQVS Trigger: TGACACCTGGCCTGACCAACTTGTTTCCAGTACATTAAGGGCCAAGGACGAATTTAATCTCCGCCTAGAATAGTCTCTGAGGTACACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS TCA 72 bp | TGCCTAGGTCTGGGGCATCTGGCTTATTTTATAAAGTaGAGAACTTTGCTTGACTGGTGGGAAGCAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CLGLGHLAYFIK*RTLLDWWEAER Trigger: CCTCTCTGCTTCCCACCAGTCAAGCAAAGTTCTTCACTTTATAAAATAAGCCAGATGCCCCAGACCTAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 72 bp | AGTCCAGCAGGATGGGAAAACCTCTTCCTGGAAGTCTaGCATCTGTGTGCTTTTAGGTCGCTGTCTTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SPAGWENLFLEV*HLCAFRSLSSF Trigger: AAATGAAGACAGCGACCTAAAAGCACACAGATGCAAGACTTCCAGGAAGAGGTTTTCCCATCCTGCTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 72 bp | CTCAGAGACTATTCTAGGCGGAGATTAAATTCGTCCTaGGCCCTTAATGTACTGGAAACAAGTTGGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRDYSRRRLNSS*ALNVLETSWSG Trigger: GCCTGACCAACTTGTTTCCAGTACATTAAGGGCCAAGGACGAATTTAATCTCCGCCTAGAATAGTCTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 72 bp | CTGGGTTTCGGTTTCCTCTTTTGTAAATTAAGCAGTTaGGATGATATCATCTCCCAACTCCACCAGTACACA | + |
|
Preference number: 6 (lower is better) Translates to: LGFGFLFCKLSS*DDIISQLHQYT Trigger: TGTGTACTGGTGGAGTTGGGAGATGATATCATCCAAACTGCTTAATTTACAAAAGAGGAAACCGAAACCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||
| CDS CAA 72 bp | TGTACTAAGTATAAAGGCAAAGTAGTTATGACACTGTaGGCAGTGAAATTATACTTGGAACTCTTTCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CTKYKGKVVMTL*AVKLYLELFRR Trigger: TCTGCGAAAGAGTTCCAAGTATAATTTCACTGCCAACAGTGTCATAACTACTTTGCCTTTATACTTAGTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591893.1 |
||