Pregenerated sensors for H2BC9 (Homo sapiens)

Ensembl gene IDs: ENSG00000275713

Ensembl transcript IDs: ENST00000619466.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	TCCTCTTCTTCTGCCATCTCTTTTGCTCCACCCTCCCTCCAGAACTaGCTCCAGGAACTTGCAAGTTTTCAAGATTATGTTAATTCACCT	+
Preference number: 1 (lower is better) Translates to: SSSSAISFAPPSLQN*LQELASFQDYVNSP Trigger: AGGTGAATTAACATAATCTTGAAAACTTGCAAGTTCCTGGAGGCAGTTCTGGAGGGAGGGTGGAGCAAAAGAGATGGCAGAAGAAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619466.2
3UTR CAA 90 bp	TATCTGCTCAGTAATACAAGGCAAGGCCGAGGTGGGAAAACTTGCTaGAGTTTAAGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAAT	+
Preference number: 2 (lower is better) Translates to: YLLSNTRQGRGGKTC*SLRPALEFKTSLNN Trigger: ATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCAAGTTTTCCCACCTCGGCCTTGCCTTGTATTACTGAGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
3UTR-3UTR CCA 90 bp	CCTATTTGTAACCATAGTTCCATCAATATAGACTTAAACTCTGTGCTCTCTCCCAAGGCAAGGCCGAGGTaGGAAAACTTGCTTGAGTTT	+
Preference number: 2 (lower is better) Translates to: PICNHSSINIDLNSVLSPKARPR*ENLLEF Trigger: AAACTCAAGCAAGTTTTCCCACCTCGGCCTTGCCTT...GGGAGAGAGCACAGAGTTTAAGTCTATATTGATGGAACTATGGTTACAAATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
3UTR-3UTR TCA 90 bp	CCTATTTGTAACCATAGTTCCATCAATATAGACTTAAACTCTGTGCTCTCTCCCAAGAATGTCTACTTTTaGATTCCAGTGCTGCTGGCT	+
Preference number: 2 (lower is better) Translates to: PICNHSSINIDLNSVLSPKNVYF*IPVLLA Trigger: AGCCAGCAGCACTGGAATTCAAAAGTAGACATTCTT...GGGAGAGAGCACAGAGTTTAAGTCTATATTGATGGAACTATGGTTACAAATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
3UTR GCA 72 bp	CTCAGTAATACAAGGCAAGGCCGAGGTGGGAAAACTTaGTTGAGTTTAAGACCAGCGCTTGAGTTTAAGACC	+
Preference number: 3 (lower is better) Translates to: LSNTRQGRGGKT*LSLRPALEFKT Trigger: GGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCAAGTTTTCCCACCTCGGCCTTGCCTTGTATTACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
3UTR CAA 72 bp	CCCTGTCCACTAGGGAGGAGGCAAGAATGTCTACTTTaGAATTCCAGTGCTGCTGGCTCCTCTTCTTCTGCC	+
Preference number: 4 (lower is better) Translates to: PCPLGRRQECLL*NSSAAGSSSSA Trigger: GGCAGAAGAAGAGGAGCCAGCAGCACTGGAATTCAAAAGTAGACATTCTTGCCTCCTCCCTAGTGGACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619466.2
3UTR CAA 72 bp	AGTAATACAAGGCAAGGCCGAGGTGGGAAAACTTGCTaGAGTTTAAGACCAGCGCTTGAGTTTAAGACCAGC	+
Preference number: 4 (lower is better) Translates to: SNTRQGRGGKTC*SLRPALEFKTS Trigger: GCTGGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCAAGTTTTCCCACCTCGGCCTTGCCTTGTATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR GCA 90 bp	CCTATTTGTAACCATAGTTCCATCAATATAGACTTAAACTCTGTGCTCTCTCCCCCCTCCCTCCAGAACTaGCTCCAGGAACTTGCAAGT	+
Preference number: 4 (lower is better) Translates to: PICNHSSINIDLNSVLSPPSLQN*LQELAS Trigger: ACTTGCAAGTTCCTGGAGGCAGTTCTGGAGGGAGGG...GGGAGAGAGCACAGAGTTTAAGTCTATATTGATGGAACTATGGTTACAAATAGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR TCA 90 bp	AGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTGTACCCCACCTTAAGAGCCTTTGGGTTTaGACATGCGTCCATTTATTT	+
Preference number: 4 (lower is better) Translates to: RPALEFKTSLNNVVVPHLKSLWV*TCVHLF Trigger: AAATAAATGGACGCATGTTCAAACCCAAAGGCTCTT...AAGGTGGGGTACAACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR GCA 90 bp	TGCTTGAGTTTAAGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTTTTGAATTCCAGTGCTaGTGGCTCCTCTTCTTCTGC	+
Preference number: 4 (lower is better) Translates to: CLSLRPALEFKTSLNNVVFEFQC*WLLFFC Trigger: GCAGAAGAAGAGGAGCCAGCAGCACTGGAATTCAAA...AACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR CCA 90 bp	TGCTTGAGTTTAAGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTAAGGCAAGGCCGAGGTaGGAAAACTTGCTTGAGTTT	+
Preference number: 4 (lower is better) Translates to: CLSLRPALEFKTSLNNVVKARPR*ENLLEF Trigger: AAACTCAAGCAAGTTTTCCCACCTCGGCCTTGCCTT...AACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR GCA 90 bp	AGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTGTACCCCACCTTCTGTGTCAAATTATCTaGTCAGTAATACAAGGCAAG	+
Preference number: 4 (lower is better) Translates to: RPALEFKTSLNNVVVPHLLCQII*SVIQGK Trigger: CTTGCCTTGTATTACTGAGCAGATAATTTGACACAG...AAGGTGGGGTACAACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR GCA 90 bp	TGCTTGAGTTTAAGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTACTTTTGAATTCCAGTaGTGCTGGCTCCTCTTCTTC	+
Preference number: 4 (lower is better) Translates to: CLSLRPALEFKTSLNNVVTFEFQ*CWLLFF Trigger: GAAGAAGAGGAGCCAGCAGCACTGGAATTCAAAAGT...AACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR TCA 90 bp	TGCTTGAGTTTAAGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTAAGAATGTCTACTTTTaGATTCCAGTGCTGCTGGCT	+
Preference number: 4 (lower is better) Translates to: CLSLRPALEFKTSLNNVVKNVYF*IPVLLA Trigger: AGCCAGCAGCACTGGAATTCAAAAGTAGACATTCTT...AACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR CCA 90 bp	AGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTGTACCCCACCTTATCACTGATGAGACATaGCCAGATGAGAATATAAAT	+
Preference number: 4 (lower is better) Translates to: RPALEFKTSLNNVVVPHLITDET*PDENIN Trigger: ATTTATATTCTCATCTGGCCATGTCTCATCAGTGAT...AAGGTGGGGTACAACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR TCA 90 bp	CCTATTTGTAACCATAGTTCCATCAATATAGACTTAAACTCTGTGCTCTCTCCCGTTAAAAGAAAAACGTaGCCTTCAGACTTACGTTTC	+
Preference number: 4 (lower is better) Translates to: PICNHSSINIDLNSVLSPVKRKT*PSDLRF Trigger: GAAACGTAAGTCTGAAGGTCACGTTTTTCTTTTAAC...GGGAGAGAGCACAGAGTTTAAGTCTATATTGATGGAACTATGGTTACAAATAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR CAA 90 bp	TGCTTGAGTTTAAGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTTCTGTCACGGCTCTCTaGTGCTCTCCCCACCCCTCC	+
Preference number: 5 (lower is better) Translates to: CLSLRPALEFKTSLNNVVSVTAL*CSPHPS Trigger: GGAGGGGTGGGGAGAGCACAAGAGAGCCGTGACAGA...AACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR CAA 90 bp	TGCTTGAGTTTAAGACCAGCGCTTGAGTTTAAGACCAGCCTGAACAATGTAGTTCCGAGGTGGGAAAACTaGCTTGAGTTTAAGACCAGC	+
Preference number: 5 (lower is better) Translates to: CLSLRPALEFKTSLNNVVPRWEN*LEFKTS Trigger: GCTGGTCTTAAACTCAAGCAAGTTTTCCCACCTCGG...AACTACATTGTTCAGGCTGGTCTTAAACTCAAGCGCTGGTCTTAAACTCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619466.2
CDS-3UTR CAA 90 bp	CCTATTTGTAACCATAGTTCCATCAATATAGACTTAAACTCTGTGCTCTCTCCCAAAGAGCCTTTGGGTTaGAACATGCGTCCATTTATT	+
Preference number: 5 (lower is better) Translates to: PICNHSSINIDLNSVLSPKEPLG*NMRPFI Trigger: AATAAATGGACGCATGTTCAAACCCAAAGGCTCTTT...GGGAGAGAGCACAGAGTTTAAGTCTATATTGATGGAACTATGGTTACAAATAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619466.2