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Pregenerated sensors for H2BC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000158373

Ensembl transcript IDs: ENST00000289316.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGAGTTGGATTTGGGTGGGATCCACACAGTCATTTTCAGGCAGATaGGACTTCCTAAGTTCTATGTATAGATTCATATTATCAGTTATT +
Preference number: 1 (lower is better)
Translates to: MSWIWVGSTQSFSGR*DFLSSMYRFILSVI
Trigger: AATAACTGATAATATGAATCTATACATAGAACTTAGGAAGTCTCATCTGCCTGAAAATGACTGTGTGGATCCCACCCAAATCCAACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2
3UTR CAA 90 bp CTTCTTTTGATGAACCAGTGTGCAGCAAACCAGGATGAGTTGGATTaGGGTGGGATCCACACAGTCATTTTCAGGCAGATGAGACTTCCT +
Preference number: 2 (lower is better)
Translates to: LLLMNQCAANQDELD*GGIHTVIFRQMRLP
Trigger: AGGAAGTCTCATCTGCCTGAAAATGACTGTGTGGATCCCACCCAAATCCAACTCATCCTGGTTTGCTGCACACTGGTTCATCAAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289316.2
3UTR-3UTR TCA 90 bp CTCATTCAGACTTTTCTTAGCAAAGGTAGTCCATGGCAAGTAATGAATTCCCAGTGCAGCAAACCAGGATaGGTTGGATTTGGGTGGGAT +
Preference number: 2 (lower is better)
Translates to: LIQTFLSKGSPWQVMNSQCSKPG*VGFGWD
Trigger: ATCCCACCCAAATCCAACTCATCCTGGTTTGCTGCA...CTGGGAATTCATTACTTGCCATGGACTACCTTTGCTAAGAAAAGTCTGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2
3UTR-3UTR CCA 90 bp CTCATTCAGACTTTTCTTAGCAAAGGTAGTCCATGGCAAGTAATGAATTCCCAGAGGATGAGTTGGATTTaGGTGGGATCCACACAGTCA +
Preference number: 2 (lower is better)
Translates to: LIQTFLSKGSPWQVMNSQRMSWI*VGSTQS
Trigger: TGACTGTGTGGATCCCACCCAAATCCAACTCATCCT...CTGGGAATTCATTACTTGCCATGGACTACCTTTGCTAAGAAAAGTCTGAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2
3UTR-3UTR TCA 90 bp CTCATTCAGACTTTTCTTAGCAAAGGTAGTCCATGGCAAGTAATGAATTCCCAGTCATTTTCAGGCAGATaGGACTTCCTAAGTTCTATG +
Preference number: 2 (lower is better)
Translates to: LIQTFLSKGSPWQVMNSQSFSGR*DFLSSM
Trigger: CATAGAACTTAGGAAGTCTCATCTGCCTGAAAATGA...CTGGGAATTCATTACTTGCCATGGACTACCTTTGCTAAGAAAAGTCTGAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289316.2
3UTR-3UTR CAA 90 bp CTCATTCAGACTTTTCTTAGCAAAGGTAGTCCATGGCAAGTAATGAATTCCCAGCAGGATGAGTTGGATTaGGGTGGGATCCACACAGTC +
Preference number: 3 (lower is better)
Translates to: LIQTFLSKGSPWQVMNSQQDELD*GGIHTV
Trigger: GACTGTGTGGATCCCACCCAAATCCAACTCATCCTG...CTGGGAATTCATTACTTGCCATGGACTACCTTTGCTAAGAAAAGTCTGAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2
3UTR-3UTR CAA 90 bp CTCATTCAGACTTTTCTTAGCAAAGGTAGTCCATGGCAAGTAATGAATTCCCAGCTCGGTAACCTTCTTTaGATGAACCAGTGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: LIQTFLSKGSPWQVMNSQLGNLL*MNQCAA
Trigger: TGCTGCACACTGGTTCATCAAAAGAAGGTTACCGAG...CTGGGAATTCATTACTTGCCATGGACTACCTTTGCTAAGAAAAGTCTGAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2
3UTR CAA 72 bp ATGAACCAGTGTGCAGCAAACCAGGATGAGTTGGATTaGGGTGGGATCCACACAGTCATTTTCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: MNQCAANQDELD*GGIHTVIFRQM
Trigger: CATCTGCCTGAAAATGACTGTGTGGATCCCACCCAAATCCAACTCATCCTGGTTTGCTGCACACTGGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2
CDS-3UTR CCA 90 bp CTCATTCAGACTTTTCTTAGCAAAGGTAGTCCATGGCAAGTAATGAATTCCCAGTTCATGTCTCTCCCTTaGCAAAGTTACTTGGAACTG +
Preference number: 4 (lower is better)
Translates to: LIQTFLSKGSPWQVMNSQFMSLP*QSYLEL
Trigger: CAGTTCCAAGTAACTTTGCCAAGGGAGAGACATGAA...CTGGGAATTCATTACTTGCCATGGACTACCTTTGCTAAGAAAAGTCTGAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2
CDS-3UTR CCA 90 bp CTCATTCAGACTTTTCTTAGCAAAGGTAGTCCATGGCAAGTAATGAATTCCCAGAGCAAAGGTAGTCCATaGCAAGTAATGAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: LIQTFLSKGSPWQVMNSQSKGSP*QVMNSQ
Trigger: CTGGGAATTCATTACTTGCCATGGACTACCTTTGCT...CTGGGAATTCATTACTTGCCATGGACTACCTTTGCTAAGAAAAGTCTGAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2
CDS-3UTR CAA 90 bp CTCATTCAGACTTTTCTTAGCAAAGGTAGTCCATGGCAAGTAATGAATTCCCAGCTTCATGTCTCTCCCTaGGCAAAGTTACTTGGAACT +
Preference number: 5 (lower is better)
Translates to: LIQTFLSKGSPWQVMNSQLHVSP*AKLLGT
Trigger: AGTTCCAAGTAACTTTGCCAAGGGAGAGACATGAAG...CTGGGAATTCATTACTTGCCATGGACTACCTTTGCTAAGAAAAGTCTGAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289316.2