Pregenerated sensors for H2BC11 (Homo sapiens)
Ensembl gene IDs: ENSG00000124635Ensembl transcript IDs: ENST00000606923.1, ENST00000607124.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCTTCATTTCAAAGATGAGCATCAGTCTCGTCTTCAGAGAAGATaGAGCCATTGTGGGGTTAGGGTTTCTCTCCTCAGGTCACTAGTG | + |
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Preference number: 1 (lower is better) Translates to: ALHFKDEHQSRLQRR*SHCGVRVSLLRSLV Trigger: CACTAGTGACCTGAGGAGAGAAACCCTAACCCCACAATGGCTGCATCTTCTCTGAAGACGAGACTGATGCTCATCTTTGAAATGAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607124.1 |
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| 3UTR CCA 90 bp | AATAGCAGTTCAGCCACCCCACAGCAGCTCTGGCATGGCTGTTTCTaGATACCTTCATGGAGAAATGCACACACTGCCCTTCATTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: NSSSATPQQLWHGCF*IPSWRNAHTALHFK Trigger: TTTGAAATGAAGGGCAGTGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTGGGGTGGCTGAACTGCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR TCA 90 bp | GATACCTTCATGGAGAAATGCACACACTGCCCTTCATTTCAAAGATaGGCATCAGTCTCGTCTTCAGAGAAGATGCAGCCATTGTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: DTFMEKCTHCPSFQR*ASVSSSEKMQPLWG Trigger: ACCCCACAATGGCTGCATCTTCTCTGAAGACGAGACTGATGCTCATCTTTGAAATGAAGGGCAGTGTGTGCATTTCTCCATGAAGGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR TCA 90 bp | AGAAGTACTTTGCTGGGCACTGTTCTAGAAGCTGGGAAATACAAGTaGTCAAAATATAACCTACCCCACAACTCCCAAATCCAGCTCGAA | + |
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Preference number: 1 (lower is better) Translates to: RSTLLGTVLEAGKYK*SKYNLPHNSQIQLE Trigger: TTCGAGCTGGATTTGGGAGTTGTGGGGTAGGTTATATTTTGATCACTTGTATTTCCCAGCTTCTAGAACAGTGCCCAGCAAAGTACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607124.1 |
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| 3UTR-3UTR GCA 90 bp | GTTCCCAGTGTCAGGACCCCAATATCCTTCCTTACAAAGAGTGGGGATCCCACCCGTCTTCAGAGAAGATaGAGCCATTGTGGGGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: VPSVRTPISFLTKSGDPTRLQRR*SHCGVR Trigger: CCTAACCCCACAATGGCTGCATCTTCTCTGAAGACG...GGTGGGATCCCCACTCTTTGTAAGGAAGGATATTGGGGTCCTGACACTGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR-3UTR GCA 90 bp | AGTTCCCAGTGTCAGGACCCCAATATCCTTCCTTACAAAGAGTGGGGATCCCACCGTCTTCAGAGAAGATaGAGCCATTGTGGGGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: SSQCQDPNILPYKEWGSHRLQRR*SHCGVR Trigger: CCTAACCCCACAATGGCTGCATCTTCTCTGAAGACG...GTGGGATCCCCACTCTTTGTAAGGAAGGATATTGGGGTCCTGACACTGGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR-3UTR TCA 90 bp | GTTCCCAGTGTCAGGACCCCAATATCCTTCCTTACAAAGAGTGGGGATCCCACCCCTTCATTTCAAAGATaGGCATCAGTCTCGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: VPSVRTPISFLTKSGDPTPSFQR*ASVSSS Trigger: TGAAGACGAGACTGATGCTCATCTTTGAAATGAAGG...GGTGGGATCCCCACTCTTTGTAAGGAAGGATATTGGGGTCCTGACACTGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR-3UTR TCA 90 bp | CACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACACCTTCATTTCAAAGATaGGCATCAGTCTCGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: HSSSGMAVSGYLHGEMHTPSFQR*ASVSSS Trigger: TGAAGACGAGACTGATGCTCATCTTTGAAATGAAGG...TGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR-3UTR CCA 90 bp | TTTATTCAGAGAAGTACTTTGCTGGGCACTGTTCTAGAAGCTGGGAAATACAAGACCCCACAGCAGCTCTaGCATGGCTGTTTCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: FIQRSTLLGTVLEAGKYKTPQQL*HGCFWI Trigger: TATCCAGAAACAGCCATGCCAGAGCTGCTGTGGGGT...CTTGTATTTCCCAGCTTCTAGAACAGTGCCCAGCAAAGTACTTCTCTGAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607124.1 |
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| 3UTR CCA 72 bp | AAAAGGAATAGCAGTTCAGCCACCCCACAGCAGCTCTaGCATGGCTGTTTCTGGATACCTTCATGGAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: KRNSSSATPQQL*HGCFWIPSWRN Trigger: ATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTGGGGTGGCTGAACTGCTATTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR CCA 72 bp | CAGTGTCAGGACCCCAATATCCTTCCTTACAAAGAGTaGGGATCCCACCCTAGAAAAGGAATAGCAGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: QCQDPNILPYKE*GSHPRKGIAVQ Trigger: CTGAACTGCTATTCCTTTTCTAGGGTGGGATCCCCACTCTTTGTAAGGAAGGATATTGGGGTCCTGACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR TCA 72 bp | ATGGAGAAATGCACACACTGCCCTTCATTTCAAAGATaGGCATCAGTCTCGTCTTCAGAGAAGATGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: MEKCTHCPSFQR*ASVSSSEKMQP Trigger: TGGCTGCATCTTCTCTGAAGACGAGACTGATGCTCATCTTTGAAATGAAGGGCAGTGTGTGCATTTCTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| 3UTR TCA 72 bp | TTGCTGGGCACTGTTCTAGAAGCTGGGAAATACAAGTaGTCAAAATATAACCTACCCCACAACTCCCAAATC | + |
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Preference number: 3 (lower is better) Translates to: LLGTVLEAGKYK*SKYNLPHNSQI Trigger: GATTTGGGAGTTGTGGGGTAGGTTATATTTTGATCACTTGTATTTCCCAGCTTCTAGAACAGTGCCCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607124.1 |
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| 3UTR CCA 72 bp | AAAAGTCCTAAATTGGAACAGGAAACACAGATGGGGTaGCTCAATTACAAGACAGCAGTTAAAGAAGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: KSPKLEQETQMG*LNYKTAVKEGL Trigger: GAGGCCTTCTTTAACTGCTGTCTTGTAATTGAGCCACCCCATCTGTGTTTCCTGTTCCAATTTAGGACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR TCA 90 bp | TCCCACCCTAGAAAAGGAATAGCAGTTCAGCCACCCCACAGCAGCTCTGGCATGGCCTCACTGACAAGATaGGTTCCCAGTGTCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: SHPRKGIAVQPPHSSSGMASLTR*VPSVRT Trigger: GGTCCTGACACTGGGAACTCATCTTGTCAGTGAGGC...CATGCCAGAGCTGCTGTGGGGTGGCTGAACTGCTATTCCTTTTCTAGGGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR GCA 90 bp | AGTTCAGCCACCCCACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGTTCAGCCACTCCACCTaGGATGCGCTCGAAAATGTC | + |
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Preference number: 4 (lower is better) Translates to: SSATPQQLWHGCFWIPSWFSHST*DALENV Trigger: GACATTTTCGAGCGCATCGCAGGTGGAGTGGCTGAA...CCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTGGGGTGGCTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606923.1 |
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| CDS-3UTR GCA 90 bp | CCCAGTGTCAGGACCCCAATATCCTTCCTTACAAAGAGTGGGGATCCCACCCTACGTCTTCAGAGAAGATaGAGCCATTGTGGGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: PSVRTPISFLTKSGDPTLRLQRR*SHCGVR Trigger: CCTAACCCCACAATGGCTGCATCTTCTCTGAAGACG...TAGGGTGGGATCCCCACTCTTTGTAAGGAAGGATATTGGGGTCCTGACACTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | CACCCCACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACAGCAGCTCTGGCATaGCTGTTTCTGGATACCTTC | + |
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Preference number: 4 (lower is better) Translates to: HPTAALAWLFLDTFMEKCTAALA*LFLDTF Trigger: GAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGT...GCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTGGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | AGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACACTGCCCACCCCACAGCAGCTCTaGCATGGCTGTTTCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: SSGMAVSGYLHGEMHTLPTPQQL*HGCFWI Trigger: TATCCAGAAACAGCCATGCCAGAGCTGCTGTGGGGT...GGGCAGTGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR GCA 90 bp | CCCACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACGTCTTCAGAGAAGATaGAGCCATTGTGGGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: PTAALAWLFLDTFMEKCTRLQRR*SHCGVR Trigger: CCTAACCCCACAATGGCTGCATCTTCTCTGAAGACG...TGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR TCA 90 bp | TCCCACCCTAGAAAAGGAATAGCAGTTCAGCCACCCCACAGCAGCTCTGGCATGCCTTCATTTCAAAGATaGGCATCAGTCTCGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SHPRKGIAVQPPHSSSGMPSFQR*ASVSSS Trigger: TGAAGACGAGACTGATGCTCATCTTTGAAATGAAGG...CATGCCAGAGCTGCTGTGGGGTGGCTGAACTGCTATTCCTTTTCTAGGGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | TGTCAGGACCCCAATATCCTTCCTTACAAAGAGTGGGGATCCCACCCTAGAAAAACAGCAGCTCTGGCATaGCTGTTTCTGGATACCTTC | + |
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Preference number: 4 (lower is better) Translates to: CQDPNILPYKEWGSHPRKTAALA*LFLDTF Trigger: GAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGT...TTTTCTAGGGTGGGATCCCCACTCTTTGTAAGGAAGGATATTGGGGTCCTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | CACCCCACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCAACAGGAAACACAGATaGGGTGGCTCAATTACAAGA | + |
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Preference number: 4 (lower is better) Translates to: HPTAALAWLFLDTFMEKCNRKHR*GGSITR Trigger: TCTTGTAATTGAGCCACCCCATCTGTGTTTCCTGTT...GCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR TCA 90 bp | AATTACAAGACAGCAGTTAAAGAAGGCCTCACTGACAAGATGAGTTCCCAGTGTGCCTCACTGACAAGATaGGTTCCCAGTGTCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: NYKTAVKEGLTDKMSSQCASLTR*VPSVRT Trigger: GGTCCTGACACTGGGAACTCATCTTGTCAGTGAGGC...ACACTGGGAACTCATCTTGTCAGTGAGGCCTTCTTTAACTGCTGTCTTGTAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR GCA 90 bp | CCACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACACCTTCATGGAGAAATaGACACACTGCCCTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: PQQLWHGCFWIPSWRNAHTFMEK*THCPSF Trigger: AAATGAAGGGCAGTGTGTGCATTTCTCCATGAAGGT...GTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR GCA 90 bp | AGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACACTGCCCACCTTCATGGAGAAATaGACACACTGCCCTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: SSGMAVSGYLHGEMHTLPTFMEK*THCPSF Trigger: AAATGAAGGGCAGTGTGTGCATTTCTCCATGAAGGT...GGGCAGTGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | CAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACACTTTCTGGATACCTTCATaGAGAAATGCACACACTGCC | + |
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Preference number: 4 (lower is better) Translates to: QQLWHGCFWIPSWRNAHTFWIPS*RNAHTA Trigger: GGCAGTGTGTGCATTTCTCCATGAAGGTATCCAGAA...AGTGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | CACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACACTTCCTTACAAAGAGTaGGGATCCCACCCTAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HSSSGMAVSGYLHGEMHTLPYKE*GSHPRK Trigger: TTTTCTAGGGTGGGATCCCCACTCTTTGTAAGGAAG...TGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | CCCACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACAAACAGGAAACACAGATaGGGTGGCTCAATTACAAGA | + |
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Preference number: 4 (lower is better) Translates to: PTAALAWLFLDTFMEKCTNRKHR*GGSITR Trigger: TCTTGTAATTGAGCCACCCCATCTGTGTTTCCTGTT...TGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | ATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACACTGCCCTTCATTTCAGAAACACAGATGGGGTaGCTCAATTACAAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: MAVSGYLHGEMHTLPFISETQMG*LNYKTA Trigger: TGCTGTCTTGTAATTGAGCCACCCCATCTGTGTTTC...TGAAATGAAGGGCAGTGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | AATTACAAGACAGCAGTTAAAGAAGGCCTCACTGACAAGATGAGTTCCCAGTGTTTCTGGATACCTTCATaGAGAAATGCACACACTGCC | + |
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Preference number: 4 (lower is better) Translates to: NYKTAVKEGLTDKMSSQCFWIPS*RNAHTA Trigger: GGCAGTGTGTGCATTTCTCCATGAAGGTATCCAGAA...ACACTGGGAACTCATCTTGTCAGTGAGGCCTTCTTTAACTGCTGTCTTGTAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | CTTCATTTCAAAGATGAGCATCAGTCTCGTCTTCAGAGAAGATGCAGCCATTGTCTTCCTTACAAAGAGTaGGGATCCCACCCTAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LHFKDEHQSRLQRRCSHCLPYKE*GSHPRK Trigger: TTTTCTAGGGTGGGATCCCCACTCTTTGTAAGGAAG...ACAATGGCTGCATCTTCTCTGAAGACGAGACTGATGCTCATCTTTGAAATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | AATTACAAGACAGCAGTTAAAGAAGGCCTCACTGACAAGATGAGTTCCCAGTGTGAAACACAGATGGGGTaGCTCAATTACAAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: NYKTAVKEGLTDKMSSQCETQMG*LNYKTA Trigger: TGCTGTCTTGTAATTGAGCCACCCCATCTGTGTTTC...ACACTGGGAACTCATCTTGTCAGTGAGGCCTTCTTTAACTGCTGTCTTGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606923.1 ENST00000607124.1 |
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| CDS-3UTR TCA 90 bp | GAGAAGTACTTTGCTGGGCACTGTTCTAGAAGCTGGGAAATACAAGTGATCAAACCTTCATTTCAAAGATaGGCATCAGTCTCGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: EKYFAGHCSRSWEIQVIKPSFQR*ASVSSS Trigger: TGAAGACGAGACTGATGCTCATCTTTGAAATGAAGG...TTTGATCACTTGTATTTCCCAGCTTCTAGAACAGTGCCCAGCAAAGTACTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607124.1 |
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| CDS-3UTR TCA 90 bp | ATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACACTGCCCTTCATTTCAGCTGGGAAATACAAGTaGTCAAAATATAACCTACCC | + |
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Preference number: 4 (lower is better) Translates to: MAVSGYLHGEMHTLPFISAGKYK*SKYNLP Trigger: GGGTAGGTTATATTTTGATCACTTGTATTTCCCAGC...TGAAATGAAGGGCAGTGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607124.1 |
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| CDS-3UTR CCA 90 bp | AAGCTGGGAAATACAAGTGATCAAAATATAACCTACCCCACAACTCCCAAATCCCACTGTTCTAGAAGCTaGGAAATACAAGTGATCAAA | + |
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Preference number: 4 (lower is better) Translates to: KLGNTSDQNITYPTTPKSHCSRS*EIQVIK Trigger: TTTGATCACTTGTATTTCCCAGCTTCTAGAACAGTG...GGATTTGGGAGTTGTGGGGTAGGTTATATTTTGATCACTTGTATTTCCCAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607124.1 |
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| CDS-3UTR CAA 90 bp | CACAGCAGCTCTGGCATGGCTGTTTCTGGATACCTTCATGGAGAAATGCACACAATTCAGAGAAGTACTTaGCTGGGCACTGTTCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: HSSSGMAVSGYLHGEMHTIQRST*LGTVLE Trigger: TTCTAGAACAGTGCCCAGCAAAGTACTTCTCTGAAT...TGTGTGCATTTCTCCATGAAGGTATCCAGAAACAGCCATGCCAGAGCTGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607124.1 |
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