Pregenerated sensors for H2AW (Homo sapiens)
Ensembl gene IDs: ENSG00000181218Ensembl transcript IDs: ENST00000366695.3, ENST00000645741.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGCGCCCTTCCCCATGGCCACTGCGCTCATTCATGAGCCTAGGGTaGTCAGGCCTCCGGCCTATAAAGAACTGCAGGATCAGTGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: LRPSPWPLRSFMSLG*SGLRPIKNCRISAA Trigger: AGCCGCACTGATCCTGCAGTTCTTTATAGGCCGGAGGCCTGATCACCCTAGGCTCATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR GCA 90 bp | GTGGCCACCTGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTaGCCACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCG | + |
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Preference number: 1 (lower is better) Translates to: VATCGRGFPVVNRTR*PPRKYAAQSVPRVS Trigger: CGAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR CAA 90 bp | CTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCGGTTCCCGTaGCGCCCTTCCCCATGGCCACTGCGCTCATTCATGAGCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: LASMQPNQSPGSRFP*RPSPWPLRSFMSLG Trigger: CCCTAGGCTCATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAACGGGAACCGAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR-3UTR CCA 90 bp | CAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCTTGCGCCCTTCCCCATaGCCACTGCGCTCATTCATG | + |
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Preference number: 2 (lower is better) Translates to: QNTLPTSQVCSPISPQGLLRPSP*PLRSFM Trigger: CATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAA...GAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR-3UTR GCA 90 bp | CACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCGGTTCCCGTTGCGCCGGCCTATAAAGAACTaGAGGATCAGTGCGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: HLASMQPNQSPGSRFPLRRPIKN*RISAAL Trigger: AAGAGCCGCACTGATCCTGCAGTTCTTTATAGGCCG...GCGCAACGGGAACCGAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR CAA 90 bp | GGACTCAAGAGCAAGGGGTGGCCACCTGTGGACGAGGGTTCCCTGTaGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: GLKSKGWPPVDEGSL*LTEHVAHLASMQPN Trigger: ATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGGCCACCCCTTGCTCTTGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR-3UTR GCA 90 bp | TTTTGGGTGGGACTCAAGAGCAAGGGGTGGCCACCTGTGGACGAGGGTTCCCTGGAACTGCAGGATCAGTaGGGCTCTTTTCTCGAGATA | + |
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Preference number: 2 (lower is better) Translates to: FWVGLKSKGWPPVDEGSLELQDQ*GSFLEI Trigger: TATCTCGAGAAAAGAGCCGCACTGATCCTGCAGTTC...CAGGGAACCCTCGTCCACAGGTGGCCACCCCTTGCTCTTGAGTCCCACCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATTGCGCCCTTCCCCATaGCCACTGCGCTCATTCATG | + |
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Preference number: 2 (lower is better) Translates to: GFPVVNRTRCPPRKYAAQLRPSP*PLRSFM Trigger: CATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAA...TTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR CAA 90 bp | GAAGACACCTTTACGGTGAGCGTTATTAAAACCCTACTAGAGGTTTaGGGTGGGACTCAAGAGCAAGGGGTGGCCACCTGTGGACGAGGG | + |
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Preference number: 2 (lower is better) Translates to: EDTFTVSVIKTLLEV*GGTQEQGVATCGRG Trigger: CCCTCGTCCACAGGTGGCCACCCCTTGCTCTTGAGTCCCACCCAAAACCTCTAGTAGGGTTTTAATAACGCTCACCGTAAAGGTGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR-3UTR TCA 90 bp | GGTTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATTTCATGAGCCTAGGGTaGTCAGGCCTCCGGCCTATA | + |
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Preference number: 2 (lower is better) Translates to: GSLLLTEHVAHLASMQPNFMSLG*SGLRPI Trigger: TATAGGCCGGAGGCCTGATCACCCTAGGCTCATGAA...ATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR-3UTR GCA 90 bp | GTCACTAGTAATTATGAAGACACCTTTACGGTGAGCGTTATTAAAACCCTACTAGAACTGCAGGATCAGTaGGGCTCTTTTCTCGAGATA | + |
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Preference number: 2 (lower is better) Translates to: VTSNYEDTFTVSVIKTLLELQDQ*GSFLEI Trigger: TATCTCGAGAAAAGAGCCGCACTGATCCTGCAGTTC...TAGTAGGGTTTTAATAACGCTCACCGTAAAGGTGTCTTCATAATTACTAGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR CAA 90 bp | ATCATTAAGAAATTGCATTCTGTACTTGATGACCACACGGGAACCTaGCTAGAGTCAAGAGAACTTGTCACTAGTAATTATGAAGACACC | + |
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Preference number: 2 (lower is better) Translates to: IIKKLHSVLDDHTGT*LESRELVTSNYEDT Trigger: GGTGTCTTCATAATTACTAGTGACAAGTTCTCTTGACTCTAGCAAGGTTCCCGTGTGGTCATCAAGTACAGAATGCAATTTCTTAATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR TCA 72 bp | TCCCCATGGCCACTGCGCTCATTCATGAGCCTAGGGTaGTCAGGCCTCCGGCCTATAAAGAACTGCAGGATC | + |
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Preference number: 3 (lower is better) Translates to: SPWPLRSFMSLG*SGLRPIKNCRI Trigger: GATCCTGCAGTTCTTTATAGGCCGGAGGCCTGATCACCCTAGGCTCATGAATGAGCGCAGTGGCCATGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR GCA 72 bp | TGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTaGCCACCTCGCAAGTATGCAGCCCAATCAGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: CGRGFPVVNRTR*PPRKYAAQSVP Trigger: GGGGACTGATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR GCA 72 bp | ATCAGGCCTCCGGCCTATAAAGAACTGCAGGATCAGTaGGGCTCTTTTCTCGAGATAGTAGGTGGCTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: IRPPAYKELQDQ*GSFLEIVGGSE Trigger: TTCAGAGCCACCTACTATCTCGAGAAAAGAGCCGCACTGATCCTGCAGTTCTTTATAGGCCGGAGGCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR-3UTR CAA 90 bp | GTCACTAGTAATTATGAAGACACCTTTACGGTGAGCGTTATTAAAACCCTACTAGGGTCTCGGTTCCCGTaGCGCCCTTCCCCATGGCCA | + |
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Preference number: 3 (lower is better) Translates to: VTSNYEDTFTVSVIKTLLGSRFP*RPSPWP Trigger: TGGCCATGGGGAAGGGCGCAACGGGAACCGAGACCC...TAGTAGGGTTTTAATAACGCTCACCGTAAAGGTGTCTTCATAATTACTAGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | CGGTTCCCGTTGCGCCCTTCCCCATGGCCACTGCGCTCATTCATGAGCCTAGGGCGCGCCTTGCCACCCTaGTTACCACGACCGGACATT | + |
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Preference number: 4 (lower is better) Translates to: RFPLRPSPWPLRSFMSLGRALPP*LPRPDI Trigger: AATGTCCGGTCGTGGTAAGCAGGGTGGCAAGGCGCG...CCCTAGGCTCATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAACGGGAACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | CCACCTGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAGCGGGCGGCCTCACTTaGCCTTGGCCTTGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PPVDEGSLLLTEHVAHLAAGGLT*PWPCGG Trigger: GCCACCACAAGGCCAAGGGCAAGTGAGGCCGCCCGC...TGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CCA 90 bp | CACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCGGTTCCCGTTGCGCAGGGGTGGCCACCTGTaGACGAGGGTTCCCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: HLASMQPNQSPGSRFPLRRGGHL*TRVPCC Trigger: ACAACAGGGAACCCTCGTCCACAGGTGGCCACCCCT...GCGCAACGGGAACCGAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR CAA 72 bp | ATGCAGCCCAATCAGTCCCCAGGGTCTCGGTTCCCGTaGCGCCCTTCCCCATGGCCACTGCGCTCATTCATG | + |
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Preference number: 4 (lower is better) Translates to: MQPNQSPGSRFP*RPSPWPLRSFM Trigger: CATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAACGGGAACCGAGACCCTGGGGACTGATTGGGCTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR TCA 90 bp | CCAGGGTCTCGGTTCCCGTTGCGCCCTTCCCCATGGCCACTGCGCTCATTCATGTTCATGAGCCTAGGGTaGTCAGGCCTCCGGCCTATA | + |
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Preference number: 4 (lower is better) Translates to: PGSRFPLRPSPWPLRSFMFMSLG*SGLRPI Trigger: TATAGGCCGGAGGCCTGATCACCCTAGGCTCATGAA...CATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAACGGGAACCGAGACCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | CCACCTGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAGGTCTCGGTTCCCGTTaGGCCCTTCCCCATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PPVDEGSLLLTEHVAHLAGLGSR*ALPHGH Trigger: GTGGCCATGGGGAAGGGCGCAACGGGAACCGAGACC...TGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | TTTTGGGTGGGACTCAAGAGCAAGGGGTGGCCACCTGTGGACGAGGGTTCCCTGCCCACCTCGCAAGTATaGAGCCCAATCAGTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FWVGLKSKGWPPVDEGSLPTSQV*SPISPQ Trigger: CTGGGGACTGATTGGGCTGCATACTTGCGAGGTGGG...CAGGGAACCCTCGTCCACAGGTGGCCACCCCTTGCTCTTGAGTCCCACCCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CCA 90 bp | GGGGTGGCCACCTGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTGCCCAAGGGGTGGCCACCTGTaGACGAGGGTTCCCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GVATCGRGFPVVNRTRCPRGGHL*TRVPCC Trigger: ACAACAGGGAACCCTCGTCCACAGGTGGCCACCCCT...TGGGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | CGGTTCCCGTTGCGCCCTTCCCCATGGCCACTGCGCTCATTCATGAGCCTAGGGCGGCCTATAAAGAACTaGAGGATCAGTGCGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RFPLRPSPWPLRSFMSLGRPIKN*RISAAL Trigger: AAGAGCCGCACTGATCCTGCAGTTCTTTATAGGCCG...CCCTAGGCTCATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAACGGGAACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CCA 90 bp | GGGGTGGCCACCTGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTGCCCATTGCGCCCTTCCCCATaGCCACTGCGCTCATTCATG | + |
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Preference number: 4 (lower is better) Translates to: GVATCGRGFPVVNRTRCPLRPSP*PLRSFM Trigger: CATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAA...TGGGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGGCCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | TTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATCAGGTCTCGGTTCCCGTTaGGCCCTTCCCCATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FPVVNRTRCPPRKYAAQSGLGSR*ALPHGH Trigger: GTGGCCATGGGGAAGGGCGCAACGGGAACCGAGACC...TGATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | CCACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCGGTTCCCGTTGCGGTTAACAGAACACGTTaGCCACCTCGCAAGTATGCA | + |
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Preference number: 4 (lower is better) Translates to: PPRKYAAQSVPRVSVPVAVNRTR*PPRKYA Trigger: TGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAAC...CGCAACGGGAACCGAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR CAA 72 bp | AGCAAGGGGTGGCCACCTGTGGACGAGGGTTCCCTGTaGTTAACAGAACACGTTGCCCACCTCGCAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: SKGWPPVDEGSL*LTEHVAHLASM Trigger: CATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGGCCACCCCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR TCA 90 bp | CATGAGCCTAGGGTGATCAGGCCTCCGGCCTATAAAGAACTGCAGGATCAGTGCTTCATGAGCCTAGGGTaGTCAGGCCTCCGGCCTATA | + |
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Preference number: 4 (lower is better) Translates to: HEPRVIRPPAYKELQDQCFMSLG*SGLRPI Trigger: TATAGGCCGGAGGCCTGATCACCCTAGGCTCATGAA...GCACTGATCCTGCAGTTCTTTATAGGCCGGAGGCCTGATCACCCTAGGCTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | TTTTGGGTGGGACTCAAGAGCAAGGGGTGGCCACCTGTGGACGAGGGTTCCCTGGTTAACAGAACACGTTaGCCACCTCGCAAGTATGCA | + |
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Preference number: 4 (lower is better) Translates to: FWVGLKSKGWPPVDEGSLVNRTR*PPRKYA Trigger: TGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAAC...CAGGGAACCCTCGTCCACAGGTGGCCACCCCTTGCTCTTGAGTCCCACCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CCA 90 bp | CAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCACTAGAGGTTTTGGGTaGGACTCAAGAGCAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QNTLPTSQVCSPISPQGLTRGFG*DSRARG Trigger: ACCCCTTGCTCTTGAGTCCCACCCAAAACCTCTAGT...GAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR TCA 90 bp | TATGCAGCCCAATCAGTCCCCAGGGTCTCGGTTCCCGTTGCGCCCTTCCCCATGAAGACACCTTTACGGTaGGCGTTATTAAAACCCTAC | + |
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Preference number: 4 (lower is better) Translates to: YAAQSVPRVSVPVAPFPMKTPLR*ALLKPY Trigger: GTAGGGTTTTAATAACGCTCACCGTAAAGGTGTCTT...CATGGGGAAGGGCGCAACGGGAACCGAGACCCTGGGGACTGATTGGGCTGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATCAGTTGCGCCCTTCCCCATaGCCACTGCGCTCATTCATG | + |
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Preference number: 4 (lower is better) Translates to: SLLLTEHVAHLASMQPNQLRPSP*PLRSFM Trigger: CATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAA...CTGATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CCA 90 bp | TTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATCACTCAAGAGCAAGGGGTaGCCACCTGTGGACGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: FPVVNRTRCPPRKYAAQSLKSKG*PPVDEG Trigger: ACCCTCGTCCACAGGTGGCCACCCCTTGCTCTTGAG...TGATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | GTGAGCGTTATTAAAACCCTACTAGAGGTTTTGGGTGGGACTCAAGAGCAAGGGCGCGCCTTGCCACCCTaGTTACCACGACCGGACATT | + |
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Preference number: 4 (lower is better) Translates to: VSVIKTLLEVLGGTQEQGRALPP*LPRPDI Trigger: AATGTCCGGTCGTGGTAAGCAGGGTGGCAAGGCGCG...CCCTTGCTCTTGAGTCCCACCCAAAACCTCTAGTAGGGTTTTAATAACGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | AAGGGGTGGCCACCTGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTGCCGAACTGCAGGATCAGTaGGGCTCTTTTCTCGAGATA | + |
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Preference number: 4 (lower is better) Translates to: KGWPPVDEGSLLLTEHVAELQDQ*GSFLEI Trigger: TATCTCGAGAAAAGAGCCGCACTGATCCTGCAGTTC...GGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGGCCACCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CCA 90 bp | CATGAGCCTAGGGTGATCAGGCCTCCGGCCTATAAAGAACTGCAGGATCAGTGCACTAGAGGTTTTGGGTaGGACTCAAGAGCAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HEPRVIRPPAYKELQDQCTRGFG*DSRARG Trigger: ACCCCTTGCTCTTGAGTCCCACCCAAAACCTCTAGT...GCACTGATCCTGCAGTTCTTTATAGGCCGGAGGCCTGATCACCCTAGGCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | AGCAAGGGGTGGCCACCTGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTGAACTGCAGGATCAGTaGGGCTCTTTTCTCGAGATA | + |
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Preference number: 4 (lower is better) Translates to: SKGWPPVDEGSLLLTEHVELQDQ*GSFLEI Trigger: TATCTCGAGAAAAGAGCCGCACTGATCCTGCAGTTC...AACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGGCCACCCCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | GGTTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATCGGCCTATAAAGAACTaGAGGATCAGTGCGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GSLLLTEHVAHLASMQPNRPIKN*RISAAL Trigger: AAGAGCCGCACTGATCCTGCAGTTCTTTATAGGCCG...ATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR CAA 72 bp | TTTACGGTGAGCGTTATTAAAACCCTACTAGAGGTTTaGGGTGGGACTCAAGAGCAAGGGGTGGCCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: FTVSVIKTLLEV*GGTQEQGVATC Trigger: ACAGGTGGCCACCCCTTGCTCTTGAGTCCCACCCAAAACCTCTAGTAGGGTTTTAATAACGCTCACCGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR GCA 90 bp | GTCACTAGTAATTATGAAGACACCTTTACGGTGAGCGTTATTAAAACCCTACTACCCACCTCGCAAGTATaGAGCCCAATCAGTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VTSNYEDTFTVSVIKTLLPTSQV*SPISPQ Trigger: CTGGGGACTGATTGGGCTGCATACTTGCGAGGTGGG...TAGTAGGGTTTTAATAACGCTCACCGTAAAGGTGTCTTCATAATTACTAGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR TCA 90 bp | ATCATTAAGAAATTGCATTCTGTACTTGATGACCACACGGGAACCTTGCTAGAGAAGACACCTTTACGGTaGGCGTTATTAAAACCCTAC | + |
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Preference number: 4 (lower is better) Translates to: IIKKLHSVLDDHTGTLLEKTPLR*ALLKPY Trigger: GTAGGGTTTTAATAACGCTCACCGTAAAGGTGTCTT...CTCTAGCAAGGTTCCCGTGTGGTCATCAAGTACAGAATGCAATTTCTTAATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| 3UTR CAA 72 bp | AAATTGCATTCTGTACTTGATGACCACACGGGAACCTaGCTAGAGTCAAGAGAACTTGTCACTAGTAATTAT | + |
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Preference number: 4 (lower is better) Translates to: KLHSVLDDHTGT*LESRELVTSNY Trigger: ATAATTACTAGTGACAAGTTCTCTTGACTCTAGCAAGGTTCCCGTGTGGTCATCAAGTACAGAATGCAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | ACTAGAGGTTTTGGGTGGGACTCAAGAGCAAGGGGTGGCCACCTGTGGACGAGGGGGTCTCGGTTCCCGTaGCGCCCTTCCCCATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: TRGFGWDSRARGGHLWTRGSRFP*RPSPWP Trigger: TGGCCATGGGGAAGGGCGCAACGGGAACCGAGACCC...CCTCGTCCACAGGTGGCCACCCCTTGCTCTTGAGTCCCACCCAAAACCTCTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | CGGTTCCCGTTGCGCCCTTCCCCATGGCCACTGCGCTCATTCATGAGCCTAGGGGACGAGGGTTCCCTGTaGTTAACAGAACACGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: RFPLRPSPWPLRSFMSLGDEGSL*LTEHVA Trigger: GGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTC...CCCTAGGCTCATGAATGAGCGCAGTGGCCATGGGGAAGGGCGCAACGGGAACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | GGTTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATGGGTCTCGGTTCCCGTaGCGCCCTTCCCCATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: GSLLLTEHVAHLASMQPNGSRFP*RPSPWP Trigger: TGGCCATGGGGAAGGGCGCAACGGGAACCGAGACCC...ATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | GTTGCCCACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCGGTTCCCGGACCACACGGGAACCTaGCTAGAGTCAAGAGAACTT | + |
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Preference number: 5 (lower is better) Translates to: VAHLASMQPNQSPGSRFPDHTGT*LESREL Trigger: AAGTTCTCTTGACTCTAGCAAGGTTCCCGTGTGGTC...CGGGAACCGAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTGGGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | CAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCGACGAGGGTTCCCTGTaGTTAACAGAACACGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: QNTLPTSQVCSPISPQGLDEGSL*LTEHVA Trigger: GGCAACGTGTTCTGTTAACAACAGGGAACCCTCGTC...GAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | CCACCTCGCAAGTATGCAGCCCAATCAGTCCCCAGGGTCTCGGTTCCCGTTGCGAATTGCATTCTGTACTaGATGACCACACGGGAACCT | + |
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Preference number: 5 (lower is better) Translates to: PPRKYAAQSVPRVSVPVANCILY*MTTREP Trigger: AGGTTCCCGTGTGGTCATCAAGTACAGAATGCAATT...CGCAACGGGAACCGAGACCCTGGGGACTGATTGGGCTGCATACTTGCGAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | AGCAAGGGGTGGCCACCTGTGGACGAGGGTTCCCTGTTGTTAACAGAACACGTTACCCTACTAGAGGTTTaGGGTGGGACTCAAGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SKGWPPVDEGSLLLTEHVTLLEV*GGTQEQ Trigger: TTGCTCTTGAGTCCCACCCAAAACCTCTAGTAGGGT...AACGTGTTCTGTTAACAACAGGGAACCCTCGTCCACAGGTGGCCACCCCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | GGTTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAATGACCACACGGGAACCTaGCTAGAGTCAAGAGAACTT | + |
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Preference number: 5 (lower is better) Translates to: GSLLLTEHVAHLASMQPNDHTGT*LESREL Trigger: AAGTTCTCTTGACTCTAGCAAGGTTCCCGTGTGGTC...ATTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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| CDS-3UTR CAA 90 bp | GGGTTCCCTGTTGTTAACAGAACACGTTGCCCACCTCGCAAGTATGCAGCCCAAAATTGCATTCTGTACTaGATGACCACACGGGAACCT | + |
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Preference number: 5 (lower is better) Translates to: GFPVVNRTRCPPRKYAAQNCILY*MTTREP Trigger: AGGTTCCCGTGTGGTCATCAAGTACAGAATGCAATT...TTGGGCTGCATACTTGCGAGGTGGGCAACGTGTTCTGTTAACAACAGGGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366695.3 ENST00000645741.1 |
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